Your job contains 1 sequence.
>036589
MNKAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITK
LGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR
TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVTG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036589
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009620 - symbol:AT1G53330 species:3702 "Arabi... 433 9.6e-41 1
TAIR|locus:2026560 - symbol:AT1G07740 "AT1G07740" species... 172 3.0e-12 1
TAIR|locus:2090034 - symbol:AT3G13160 species:3702 "Arabi... 169 4.5e-12 1
TAIR|locus:2012120 - symbol:AT1G55890 species:3702 "Arabi... 168 5.9e-12 1
TAIR|locus:2171352 - symbol:AT5G16420 "AT5G16420" species... 166 1.8e-11 1
TAIR|locus:2089581 - symbol:AT3G14580 "AT3G14580" species... 160 4.6e-11 1
TAIR|locus:2115375 - symbol:AT4G36680 species:3702 "Arabi... 160 4.8e-11 1
TAIR|locus:2090014 - symbol:AT3G13150 "AT3G13150" species... 156 2.2e-10 1
TAIR|locus:2046288 - symbol:AT2G18520 species:3702 "Arabi... 154 2.2e-10 1
TAIR|locus:2027387 - symbol:AT1G11630 species:3702 "Arabi... 140 6.9e-09 1
TAIR|locus:2036833 - symbol:PPR336 "pentatricopeptide rep... 132 5.2e-08 1
TAIR|locus:2019085 - symbol:AT1G74580 "AT1G74580" species... 135 6.3e-08 1
TAIR|locus:2125152 - symbol:AT4G01400 "AT4G01400" species... 136 7.9e-08 1
TAIR|locus:2095309 - symbol:AT3G09060 "AT3G09060" species... 132 1.2e-07 1
TAIR|locus:2061310 - symbol:GUN1 "AT2G31400" species:3702... 126 1.2e-06 2
TAIR|locus:2119747 - symbol:EMB1025 "embryo defective 102... 126 2.4e-06 1
TAIR|locus:1006230454 - symbol:AT5G18475 "AT5G18475" spec... 123 6.2e-06 1
TAIR|locus:2031998 - symbol:EMB3101 "AT1G05600" species:3... 121 1.2e-05 1
TAIR|locus:504955997 - symbol:AT2G17525 species:3702 "Ara... 120 2.6e-05 1
TAIR|locus:2042057 - symbol:AT2G27800 species:3702 "Arabi... 118 3.1e-05 1
TAIR|locus:2077735 - symbol:AT3G59040 "AT3G59040" species... 117 6.5e-05 1
TAIR|locus:2027166 - symbol:PTAC2 "plastid transcriptiona... 117 0.00011 1
TAIR|locus:2012883 - symbol:AT1G20300 species:3702 "Arabi... 114 0.00015 1
TAIR|locus:2049756 - symbol:AT2G37230 species:3702 "Arabi... 112 0.00043 1
TAIR|locus:2027212 - symbol:AT1G74750 species:3702 "Arabi... 111 0.00067 1
TAIR|locus:2130354 - symbol:AT4G14820 "AT4G14820" species... 110 0.00073 1
>TAIR|locus:2009620 [details] [associations]
symbol:AT1G53330 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC008007 GO:GO:0048364 GO:GO:0009790 PROSITE:PS51375
GO:GO:0010154 GO:GO:0048367 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 Pfam:PF13041 IPI:IPI00523997 PIR:E96573
RefSeq:NP_175740.1 UniGene:At.66016 ProteinModelPortal:Q9MAG8
SMR:Q9MAG8 EnsemblPlants:AT1G53330.1 GeneID:841768
KEGG:ath:AT1G53330 GeneFarm:4332 TAIR:At1g53330 eggNOG:NOG254458
HOGENOM:HOG000070869 InParanoid:Q9MAG8 OMA:ACTYNIL PhylomeDB:Q9MAG8
ProtClustDB:CLSN2679807 Genevestigator:Q9MAG8 Uniprot:Q9MAG8
Length = 471
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 84/149 (56%), Positives = 111/149 (74%)
Query: 1 MNKAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITK 60
M+ K S FRLASLL + P A++LF+NP+P + + P +PFRY+LL YD+IITK
Sbjct: 1 MSAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTN----PKRPFRYSLLCYDIIITK 56
Query: 61 LGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR 120
LG +KMFDE+ Q+L LK DTR++P EIIFCNVI+F+GR +L AL +FDEMP + QR
Sbjct: 57 LGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQR 116
Query: 121 TVKSLNTLLNALLTCGKLDRMKELFISFN 149
TVKSLN+LL+ALL CG+L++MKE S +
Sbjct: 117 TVKSLNSLLSALLKCGELEKMKERLSSID 145
>TAIR|locus:2026560 [details] [associations]
symbol:AT1G07740 "AT1G07740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC007583 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AY042798 EMBL:BT008759
EMBL:AK176347 IPI:IPI00519922 PIR:G86212 RefSeq:NP_172253.1
UniGene:At.14835 ProteinModelPortal:Q9LQQ1 SMR:Q9LQQ1 IntAct:Q9LQQ1
PaxDb:Q9LQQ1 PRIDE:Q9LQQ1 EnsemblPlants:AT1G07740.1 GeneID:837288
KEGG:ath:AT1G07740 GeneFarm:4791 TAIR:At1g07740 eggNOG:NOG252196
HOGENOM:HOG000241569 InParanoid:Q9LQQ1 OMA:LVGSACR PhylomeDB:Q9LQQ1
ProtClustDB:CLSN2682741 Genevestigator:Q9LQQ1 Uniprot:Q9LQQ1
Length = 459
Score = 172 (65.6 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 36/99 (36%), Positives = 62/99 (62%)
Query: 47 FRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHA 106
FR++ Y +I KL +++ FD + QIL +++ V E +F +I YG+A ++ A
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRY-RNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 107 LQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145
+ VF ++ SF+ RT++SLNTL+N L+ G+L++ K F
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
>TAIR|locus:2090034 [details] [associations]
symbol:AT3G13160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 EMBL:AP000375
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AY136471 EMBL:BT002597 EMBL:AY088725 IPI:IPI00517848
RefSeq:NP_566445.1 UniGene:At.1228 UniGene:At.48652
ProteinModelPortal:Q9LK57 SMR:Q9LK57 IntAct:Q9LK57 STRING:Q9LK57
PaxDb:Q9LK57 PRIDE:Q9LK57 EnsemblPlants:AT3G13160.1 GeneID:820505
KEGG:ath:AT3G13160 TAIR:At3g13160 eggNOG:NOG283371
HOGENOM:HOG000090560 InParanoid:Q9LK57 OMA:ESAYELC PhylomeDB:Q9LK57
ProtClustDB:CLSN2715534 Genevestigator:Q9LK57 Uniprot:Q9LK57
Length = 394
Score = 169 (64.5 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 45/143 (31%), Positives = 75/143 (52%)
Query: 4 AKPTSPF-RLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLG 62
A P+ P L +L++ ++ PK + FK +A + FR N+ Y+ + +L
Sbjct: 32 ATPSPPKPSLITLVNDERDPKFITEKFK---------KACQAEWFRKNIAVYERTVRRLA 82
Query: 63 RAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTV 122
AK F+ +++IL + + E + +I+ YGR + E+A +VFDEMP N +RT
Sbjct: 83 AAKKFEWVEEILEEQNKYPNMSKEGFV-ARIINLYGRVGMFENAQKVFDEMPERNCKRTA 141
Query: 123 KSLNTLLNALLTCGKLDRMKELF 145
S N LLNA + K D ++ +F
Sbjct: 142 LSFNALLNACVNSKKFDLVEGIF 164
>TAIR|locus:2012120 [details] [associations]
symbol:AT1G55890 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC002304 Pfam:PF13041 eggNOG:NOG283371
HOGENOM:HOG000090560 ProtClustDB:CLSN2715534 EMBL:AY074876
EMBL:BT015869 IPI:IPI00522052 PIR:B96600 RefSeq:NP_175985.1
UniGene:At.21348 ProteinModelPortal:Q9LG23 SMR:Q9LG23 IntAct:Q9LG23
STRING:Q9LG23 PaxDb:Q9LG23 PRIDE:Q9LG23 EnsemblPlants:AT1G55890.1
GeneID:842039 KEGG:ath:AT1G55890 GeneFarm:4335 TAIR:At1g55890
InParanoid:Q9LG23 OMA:ACESERF PhylomeDB:Q9LG23
Genevestigator:Q9LG23 Uniprot:Q9LG23
Length = 398
Score = 168 (64.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 46/134 (34%), Positives = 77/134 (57%)
Query: 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQ 71
L SL++ +++PK ++ FK A ++E FR N+ YD + +L AK ++
Sbjct: 44 LTSLVNGERNPKRIVEKFKK----ACESER-----FRTNIAVYDRTVRRLVAAKRLHYVE 94
Query: 72 QILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA 131
+IL + K R + +E +IS YG+A + E+A +VF+EMP+ + +R+V S N LL+A
Sbjct: 95 EILEEQKK-YRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSA 153
Query: 132 LLTCGKLDRMKELF 145
K D ++ELF
Sbjct: 154 YRLSKKFDVVEELF 167
>TAIR|locus:2171352 [details] [associations]
symbol:AT5G16420 "AT5G16420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005242
Gene3D:1.25.40.10 PROSITE:PS51375 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00547379 RefSeq:NP_197146.1 UniGene:At.54865
ProteinModelPortal:Q9FFE3 SMR:Q9FFE3 PRIDE:Q9FFE3
EnsemblPlants:AT5G16420.1 GeneID:831503 KEGG:ath:AT5G16420
TAIR:At5g16420 eggNOG:NOG250743 HOGENOM:HOG000241664
InParanoid:Q9FFE3 OMA:LIAGMCE PhylomeDB:Q9FFE3
ProtClustDB:CLSN2686156 Genevestigator:Q9FFE3 Uniprot:Q9FFE3
Length = 535
Score = 166 (63.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFD 68
P RL S++ Q++ LALQ+F ++ P F +N Y I+ KL RA+ FD
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAG------KSHP--GFTHNYDTYHSILFKLSRARAFD 100
Query: 69 EMQQILHQLKHDTRVIP-EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNT 127
++ ++ L++ I E +F +++ YG A E ++++F +P F V+R+V+SLNT
Sbjct: 101 PVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNT 160
Query: 128 LLNALLTCGKLDRMKELF 145
LLN L+ + D + +F
Sbjct: 161 LLNVLIQNQRFDLVHAMF 178
>TAIR|locus:2089581 [details] [associations]
symbol:AT3G14580 "AT3G14580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 TIGRFAMs:TIGR00756
EMBL:AB023038 Pfam:PF12854 Pfam:PF13041 EMBL:BT029779
IPI:IPI00522380 RefSeq:NP_188076.1 UniGene:At.39207
UniGene:At.39208 ProteinModelPortal:Q9LUD6
EnsemblPlants:AT3G14580.1 GeneID:820684 KEGG:ath:AT3G14580
TAIR:At3g14580 eggNOG:NOG269207 HOGENOM:HOG000083822
InParanoid:Q9LUD6 OMA:DWLAPNE PhylomeDB:Q9LUD6
ProtClustDB:CLSN2684941 Genevestigator:Q9LUD6 Uniprot:Q9LUD6
Length = 405
Score = 160 (61.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGR-ARLLEHALQVFDE 112
Y L+I K G+AKM+DE+++++ +K + R E F N++ YG A + A+++
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 113 MPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165
MP F + KS N +LN L++ D + ++F+S + + D C N+ I
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI-DACCLNILI 209
>TAIR|locus:2115375 [details] [associations]
symbol:AT4G36680 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161589 EMBL:Z99708
Pfam:PF01535 TIGRFAMs:TIGR00756 eggNOG:NOG295600
HOGENOM:HOG000239281 ProtClustDB:CLSN2685572 EMBL:AJ002597
EMBL:AY064155 EMBL:BT001003 IPI:IPI00537375 PIR:B85433 PIR:T52620
RefSeq:NP_195386.1 UniGene:At.27468 ProteinModelPortal:Q9M065
SMR:Q9M065 IntAct:Q9M065 STRING:Q9M065 PaxDb:Q9M065 PRIDE:Q9M065
DNASU:829821 EnsemblPlants:AT4G36680.1 GeneID:829821
KEGG:ath:AT4G36680 TAIR:At4g36680 InParanoid:Q9M065 OMA:SHKNDPK
PhylomeDB:Q9M065 Genevestigator:Q9M065 Uniprot:Q9M065
Length = 412
Score = 160 (61.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 38/132 (28%), Positives = 69/132 (52%)
Query: 14 SLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQI 73
S L + P AL+++ N +D A P+ RY +L + +L + + F +++ +
Sbjct: 38 STLRKEHDPDKALKIYAN----VSDHSASPVSS-RYA---QELTVRRLAKCRRFSDIETL 89
Query: 74 LHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALL 133
+ K+D + I EE + +I YG+A + HA++ F++M + R+ S N LLNA L
Sbjct: 90 IESHKNDPK-IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACL 148
Query: 134 TCGKLDRMKELF 145
D++ +LF
Sbjct: 149 HSKNFDKVPQLF 160
>TAIR|locus:2090014 [details] [associations]
symbol:AT3G13150 "AT3G13150" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP000375 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
eggNOG:KOG4197 EMBL:BT023440 IPI:IPI00530513 RefSeq:NP_187922.1
UniGene:At.8126 ProteinModelPortal:Q9LK58 SMR:Q9LK58 PaxDb:Q9LK58
PRIDE:Q9LK58 EnsemblPlants:AT3G13150.1 GeneID:820503
KEGG:ath:AT3G13150 TAIR:At3g13150 HOGENOM:HOG000115628
InParanoid:Q9LK58 OMA:ELNCERT PhylomeDB:Q9LK58
ProtClustDB:CLSN2915485 Genevestigator:Q9LK58 Uniprot:Q9LK58
Length = 551
Score = 156 (60.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 54 YDLIITKLGRAKMFDEMQQIL-HQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDE 112
Y I +L AK F + ++L +Q K D I E ++ YG + + EHA ++FDE
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDD--IKSEDFVIRIMLLYGYSGMAEHAHKLFDE 147
Query: 113 MPSFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145
MP N +RTVKS N LL+A + KLD + F
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
>TAIR|locus:2046288 [details] [associations]
symbol:AT2G18520 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016020 PROSITE:PS51375
EMBL:AC006135 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 EMBL:AY088617 IPI:IPI00539785 PIR:C84565
RefSeq:NP_565439.1 UniGene:At.64940 ProteinModelPortal:Q9ZU67
PaxDb:Q9ZU67 PRIDE:Q9ZU67 EnsemblPlants:AT2G18520.1 GeneID:816367
KEGG:ath:AT2G18520 TAIR:At2g18520 eggNOG:NOG295600
HOGENOM:HOG000239281 InParanoid:Q9ZU67 OMA:VMTEMEA PhylomeDB:Q9ZU67
ProtClustDB:CLSN2685572 Genevestigator:Q9ZU67 Uniprot:Q9ZU67
Length = 418
Score = 154 (59.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 40/135 (29%), Positives = 71/135 (52%)
Query: 14 SLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQI 73
S L + P AL ++K+ + N+ PL RY + +L + +L +++ F +++ +
Sbjct: 38 SKLRKVQDPDKALAIYKSVSNNSTS----PLSS-RYAM---ELTVQRLAKSQRFSDIEAL 89
Query: 74 LHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALL 133
+ K++ + I E +I YGRA + +HA+++F+EM RTV S N LL A L
Sbjct: 90 IESHKNNPK-IKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACL 148
Query: 134 TCGKLDRMKELFISF 148
+R+ +LF F
Sbjct: 149 HSDLFERVPQLFDEF 163
>TAIR|locus:2027387 [details] [associations]
symbol:AT1G11630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC007296
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AF385742 EMBL:AY081736
EMBL:AY087752 IPI:IPI00539658 PIR:G86249 RefSeq:NP_172629.1
UniGene:At.11186 ProteinModelPortal:Q9SAB4 SMR:Q9SAB4 PaxDb:Q9SAB4
EnsemblPlants:AT1G11630.1 GeneID:837707 KEGG:ath:AT1G11630
GeneFarm:4824 TAIR:At1g11630 eggNOG:NOG304930 HOGENOM:HOG000238350
InParanoid:Q9SAB4 OMA:FRIRTSE PhylomeDB:Q9SAB4
ProtClustDB:CLSN2682178 Genevestigator:Q9SAB4 Uniprot:Q9SAB4
Length = 405
Score = 140 (54.3 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 41/135 (30%), Positives = 62/135 (45%)
Query: 3 KAKPTSPFRLASLLHLQKHPKLALQLFK---NPNPNANDTEAPPLKP-FRYNLLHYDLII 58
K+ +S F L SL QK + L L K NP+ + L P + + + + + +
Sbjct: 23 KSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAV 82
Query: 59 TKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNV 118
L R K F + Q+L + E I YGRA +L+ ++Q F + + +
Sbjct: 83 VTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEI 142
Query: 119 QRTVKSLNTLLNALL 133
RTVKSLN LL A L
Sbjct: 143 PRTVKSLNALLFACL 157
>TAIR|locus:2036833 [details] [associations]
symbol:PPR336 "pentatricopeptide repeat 336" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0016020 GO:GO:0005743
GO:GO:0000166 GO:GO:0003723 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC004392 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000238350
ProtClustDB:CLSN2682178 EMBL:AF428391 EMBL:AY062858 EMBL:BT009692
EMBL:AY085627 IPI:IPI00524366 PIR:T02133 RefSeq:NP_564786.1
UniGene:At.23099 ProteinModelPortal:Q8LE47 SMR:Q8LE47 IntAct:Q8LE47
STRING:Q8LE47 PaxDb:Q8LE47 PRIDE:Q8LE47 EnsemblPlants:AT1G61870.1
GeneID:842484 KEGG:ath:AT1G61870 GeneFarm:4338 TAIR:At1g61870
eggNOG:NOG304722 InParanoid:O80694 OMA:STYNIRI PhylomeDB:Q8LE47
Genevestigator:Q8LE47 Uniprot:Q8LE47
Length = 408
Score = 132 (51.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 8 SPFRLASLLHLQKHPKLALQLFKN---PNPNANDTEAPPLKP-FRYNLLHYDLIITKLGR 63
SP L +K K AL L K+ P+ A L P R + + + + L
Sbjct: 34 SPDSKTPLTSKEKS-KAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAE 92
Query: 64 AKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVK 123
K F + +L + + E + I Y +A +L+H+L+VF ++ F + RTVK
Sbjct: 93 KKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVK 152
Query: 124 SLNTLLNALLTCGKLDRMKELFI 146
SLN LL A L K ++I
Sbjct: 153 SLNALLFACLVAKDYKEAKRVYI 175
>TAIR|locus:2019085 [details] [associations]
symbol:AT1G74580 "AT1G74580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011765 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00523389 PIR:H96774 RefSeq:NP_177597.1
UniGene:At.52514 ProteinModelPortal:Q9CA58 SMR:Q9CA58 PaxDb:Q9CA58
PRIDE:Q9CA58 EnsemblPlants:AT1G74580.1 GeneID:843798
KEGG:ath:AT1G74580 GeneFarm:4799 TAIR:At1g74580 eggNOG:NOG328959
HOGENOM:HOG000006341 InParanoid:Q9CA58 OMA:VFERMDF PhylomeDB:Q9CA58
ProtClustDB:CLSN2682259 Genevestigator:Q9CA58 Uniprot:Q9CA58
Length = 763
Score = 135 (52.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 34/148 (22%), Positives = 71/148 (47%)
Query: 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAK 65
P P + +++ QK P AL++F + F++ L Y +I KLG
Sbjct: 4 PLLPKHVTAVIKCQKDPMKALEMFNSMRKEVG---------FKHTLSTYRSVIEKLGYYG 54
Query: 66 MFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL 125
F+ M+++L ++ + E ++ + YGR ++ A+ VF+ M ++ + TV S
Sbjct: 55 KFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114
Query: 126 NTLLNALLTCGKLDRMKELFISFNLKAI 153
N +++ L+ G D+ ++++ + I
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
>TAIR|locus:2125152 [details] [associations]
symbol:AT4G01400 "AT4G01400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR002885 GO:GO:0005829 EMBL:CP002687
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 OMA:GYYITME
InterPro:IPR013167 Pfam:PF08318 SMART:SM00762 Pfam:PF13041
IPI:IPI00545047 RefSeq:NP_192049.4 UniGene:At.43212
ProteinModelPortal:F4JI19 SMR:F4JI19 PRIDE:F4JI19
EnsemblPlants:AT4G01400.1 GeneID:827943 KEGG:ath:AT4G01400
Uniprot:F4JI19
Length = 1110
Score = 136 (52.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 48/155 (30%), Positives = 72/155 (46%)
Query: 2 NKAKPT-SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITK 60
N P SP R+ L+ Q P LA ++F + N FR++ + ++I K
Sbjct: 43 NPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPN---------FRHSRSSHLILILK 93
Query: 61 LGRAKMFDEMQQILHQLKHDTRVIP-EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQ 119
LGR + F+ + +L KH + P IF +I Y A+L E L F +M FN
Sbjct: 94 LGRGRYFNLIDDVL--AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFT 151
Query: 120 RTVKSLNTLLNALLTC-GKLDRMKELFISFNLKAI 153
K LN +L+ L++ G L + ELF S L +
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGV 186
>TAIR|locus:2095309 [details] [associations]
symbol:AT3G09060 "AT3G09060" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326 Pfam:PF12854
Pfam:PF13041 IPI:IPI00529232 RefSeq:NP_187518.1 UniGene:At.65072
ProteinModelPortal:Q9SS81 SMR:Q9SS81 PRIDE:Q9SS81
EnsemblPlants:AT3G09060.1 GeneID:820059 KEGG:ath:AT3G09060
TAIR:At3g09060 eggNOG:NOG274167 HOGENOM:HOG000238473
InParanoid:Q9SS81 OMA:PGIRSYN PhylomeDB:Q9SS81
ProtClustDB:CLSN2684970 Genevestigator:Q9SS81 Uniprot:Q9SS81
Length = 687
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/151 (25%), Positives = 72/151 (47%)
Query: 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA 64
K SP + LL +K+P+ A LF + T P + ++ + Y I+ +L
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSA------TRHPG---YAHSAVVYHHILRRLSET 56
Query: 65 KMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS-FNVQRTVK 123
+M + + +I+ ++ E++ +VI YG+ + + AL VF M F + ++
Sbjct: 57 RMVNHVSRIVELIRSQECKCDEDVAL-SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIR 115
Query: 124 SLNTLLNALLTCGKLDRMKELFISFNLKAIA 154
S NTLLNA + + +++ LF F +A
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVA 146
>TAIR|locus:2061310 [details] [associations]
symbol:GUN1 "AT2G31400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0031930 "mitochondria-nucleus
signaling pathway" evidence=IMP] [GO:0010019 "chloroplast-nucleus
signaling pathway" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0031930
Gene3D:1.25.40.10 EMBL:AC007169 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 SMART:SM00463 PROSITE:PS50828
GO:GO:0010019 Pfam:PF13041 EMBL:BX819946 IPI:IPI00538422 PIR:C84720
RefSeq:NP_180698.1 UniGene:At.20815 ProteinModelPortal:Q9SIC9
SMR:Q9SIC9 EnsemblPlants:AT2G31400.1 GeneID:817698
KEGG:ath:AT2G31400 GeneFarm:4937 TAIR:At2g31400 eggNOG:NOG313285
HOGENOM:HOG000030408 InParanoid:Q9SIC9 OMA:FEDASML PhylomeDB:Q9SIC9
ProtClustDB:CLSN2683142 Genevestigator:Q9SIC9 Uniprot:Q9SIC9
Length = 918
Score = 126 (49.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 32/107 (29%), Positives = 59/107 (55%)
Query: 48 RYNLLHYDLIITKLGRAKM-FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHA 106
R NL+ Y+ +I G+ M F ++ + +++ + V P+ I F ++++ R L E A
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-VQPDRITFNSLLAVCSRGGLWEAA 358
Query: 107 LQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153
+FDEM + +++ V S NTLL+A+ G++D E+ +K I
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/124 (25%), Positives = 59/124 (47%)
Query: 43 PLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL 102
P+K N++ Y +I +A FDE + ++++ + + + + ++S Y +
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGR 459
Query: 103 LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSN 162
E AL + EM S +++ V + N LL GK D +K++F +K VL L +
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE--MKREHVLPNLLTY 517
Query: 163 LKII 166
+I
Sbjct: 518 STLI 521
Score = 35 (17.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 30 KNPNPNANDTEAPP 43
+ P P + T APP
Sbjct: 21 QRPRPGRSVTSAPP 34
>TAIR|locus:2119747 [details] [associations]
symbol:EMB1025 "embryo defective 1025" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021637 EMBL:AL161552
GO:GO:0009793 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AY864350 IPI:IPI00531732
PIR:H85227 PIR:T04893 RefSeq:NP_193742.1 UniGene:At.65409
ProteinModelPortal:O49436 SMR:O49436 EnsemblPlants:AT4G20090.1
GeneID:827754 KEGG:ath:AT4G20090 TAIR:At4g20090 eggNOG:NOG310719
HOGENOM:HOG000005779 InParanoid:O49436 OMA:MLAKYIV PhylomeDB:O49436
ProtClustDB:CLSN2685733 Genevestigator:O49436 Uniprot:O49436
Length = 660
Score = 126 (49.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/163 (26%), Positives = 80/163 (49%)
Query: 11 RLASLLHLQKHPKLALQLFKNP--NPNANDT--EAPPLKPFRYNLLHYDLIITKLGRAKM 66
R +S + + +P ++++ +NP P + AP + F+ +I +
Sbjct: 35 RFSSSVSVSPNP--SMEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGD 92
Query: 67 FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEM-PSFNVQRTVKSL 125
FD ++++L +++ + RVI E F V YG+A L + A+ +F M F +R+VKS
Sbjct: 93 FDSVEKLLSRIRLENRVIIERS-FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSF 151
Query: 126 NTLLNALLTCGKLDRMKELF---ISFNLKAIAVLDGLCSNLKI 165
N++LN ++ G R E + ++ N+ +GL NL I
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194
>TAIR|locus:1006230454 [details] [associations]
symbol:AT5G18475 "AT5G18475" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC069328 Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AK228588 IPI:IPI00522613 RefSeq:NP_974803.1
UniGene:At.19705 UniGene:At.63152 ProteinModelPortal:Q3E9F0
SMR:Q3E9F0 PRIDE:Q3E9F0 EnsemblPlants:AT5G18475.1 GeneID:2745987
KEGG:ath:AT5G18475 TAIR:At5g18475 eggNOG:NOG314917
HOGENOM:HOG000239063 InParanoid:Q3E9F0 OMA:ATLINGH PhylomeDB:Q3E9F0
ProtClustDB:CLSN2681338 Genevestigator:Q3E9F0 Uniprot:Q3E9F0
Length = 506
Score = 123 (48.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 36/145 (24%), Positives = 75/145 (51%)
Query: 3 KAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLG 62
K K S SL+ ++ P+ L +F +A K F +N Y +++ L
Sbjct: 50 KTKFISHESAVSLMKRERDPQGVLDIFN---------KASQQKGFNHNNATYSVLLDNLV 100
Query: 63 RAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF-NVQRT 121
R K F + ILHQ+K++T +E +F N++ + R+ L + +++F+ + V+ +
Sbjct: 101 RHKKFLAVDAILHQMKYETCRF-QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPS 159
Query: 122 VKSLNTLLNALLTCGKLDRMKELFI 146
+ +++T LN L+ G+++ ++L +
Sbjct: 160 LNAISTCLNLLIDSGEVNLSRKLLL 184
>TAIR|locus:2031998 [details] [associations]
symbol:EMB3101 "AT1G05600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007153 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:BT015830 EMBL:BT020451 IPI:IPI00519651 PIR:A86190
RefSeq:NP_001184914.1 RefSeq:NP_172051.1 UniGene:At.49854
ProteinModelPortal:Q9SYK1 SMR:Q9SYK1 EnsemblPlants:AT1G05600.1
EnsemblPlants:AT1G05600.2 GeneID:837065 KEGG:ath:AT1G05600
GeneFarm:4325 TAIR:At1g05600 eggNOG:NOG331676 HOGENOM:HOG000238600
InParanoid:Q9SYK1 OMA:DSCECKD PhylomeDB:Q9SYK1
ProtClustDB:CLSN2682033 Genevestigator:Q9SYK1 Uniprot:Q9SYK1
Length = 504
Score = 121 (47.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/138 (27%), Positives = 68/138 (49%)
Query: 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMF 67
+P L+ +L QK+P AL+LF+ E P + +N Y +I LG++
Sbjct: 11 TPSLLSQILKKQKNPVTALKLFEEAK------ERFP--SYGHNGSVYATMIDILGKSNRV 62
Query: 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNT 127
EM+ ++ ++K D+ + + F +VI + RA LE A+ +F + FN S +T
Sbjct: 63 LEMKYVIERMKEDSCECKDSV-FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDT 121
Query: 128 LLNALLTCGKLDRMKELF 145
LL ++ +L+ +F
Sbjct: 122 LLQEMVKESELEAACHIF 139
>TAIR|locus:504955997 [details] [associations]
symbol:AT2G17525 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
EMBL:AC007584 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AY208187 IPI:IPI00537611 RefSeq:NP_671862.1
UniGene:At.45730 ProteinModelPortal:Q84VG6 SMR:Q84VG6
EnsemblPlants:AT2G17525.1 GeneID:816259 KEGG:ath:AT2G17525
TAIR:At2g17525 eggNOG:NOG280484 InParanoid:Q84VG6 OMA:GLGRARM
PhylomeDB:Q84VG6 ProtClustDB:CLSN2690123 Genevestigator:Q84VG6
Uniprot:Q84VG6
Length = 626
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/92 (28%), Positives = 51/92 (55%)
Query: 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEM 113
Y + KL + FD + Q+L ++ + P++ IF +I +GRARL++ + V D +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 114 PSFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145
F ++ ++K N++L+ L+ +D +E F
Sbjct: 139 SKFGIKPSLKVFNSILDVLVK-EDIDIAREFF 169
>TAIR|locus:2042057 [details] [associations]
symbol:AT2G27800 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR
PROSITE:PS51375 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00539013 PIR:B84677 RefSeq:NP_180348.2
UniGene:At.52943 ProteinModelPortal:Q9ZUY1 SMR:Q9ZUY1
EnsemblPlants:AT2G27800.1 GeneID:817327 KEGG:ath:AT2G27800
GeneFarm:4933 TAIR:At2g27800 eggNOG:NOG236800 HOGENOM:HOG000238269
InParanoid:Q9ZUY1 OMA:LHVNDAL PhylomeDB:Q9ZUY1
ProtClustDB:CLSN2920577 ArrayExpress:Q9ZUY1 Genevestigator:Q9ZUY1
Uniprot:Q9ZUY1
Length = 442
Score = 118 (46.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 1 MNKAKPT-SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIIT 59
++K P +P LA + L++ P L LF N P F + Y + I
Sbjct: 130 ISKLPPRFTPEELADAITLEEDPFLCFHLF-------NWASQQPR--FTHENCSYHIAIR 180
Query: 60 KLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEM-PSFNV 118
KLG AKM+ EM I++Q+ R I E ++ ++I ++ +A L A+ +F M S N+
Sbjct: 181 KLGAAKMYQEMDDIVNQVL-SVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNL 239
Query: 119 Q-R-TVKSLNTLLNALLTCGKLDRMKELFI 146
+ R T+++ + L ALL G + +++
Sbjct: 240 ECRPTIRTYHILFKALLGRGNNSYINHVYM 269
>TAIR|locus:2077735 [details] [associations]
symbol:AT3G59040 "AT3G59040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009658 "chloroplast organization" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 UniGene:At.46184 UniGene:At.48783 IPI:IPI00528426
RefSeq:NP_974457.1 ProteinModelPortal:F4J741 SMR:F4J741
PRIDE:F4J741 EnsemblPlants:AT3G59040.2 GeneID:825073
KEGG:ath:AT3G59040 OMA:TTMLSAY Uniprot:F4J741
Length = 590
Score = 117 (46.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 67 FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLN 126
+ E+ +I Q++ + P+ + + +I YGRAR E AL VF+EM V+ T K+ N
Sbjct: 302 YKEVSKIYDQMQRSD-IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 127 TLLNALLTCGKLDRMKELFIS 147
LL+A G +++ K +F S
Sbjct: 361 ILLDAFAISGMVEQAKTVFKS 381
>TAIR|locus:2027166 [details] [associations]
symbol:PTAC2 "plastid transcriptionally active 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA;IMP]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0006399 "tRNA
metabolic process" evidence=RCA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
INTERPRO:IPR002625 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 GO:GO:0045893 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008263 EMBL:AC013258 Pfam:PF01535 TIGRFAMs:TIGR00756
SMART:SM00463 PROSITE:PS50828 GO:GO:0009508 Pfam:PF13041
IPI:IPI00541880 PIR:A96778 RefSeq:NP_177623.1 UniGene:At.34835
ProteinModelPortal:Q9S7Q2 SMR:Q9S7Q2 PaxDb:Q9S7Q2 PRIDE:Q9S7Q2
EnsemblPlants:AT1G74850.1 GeneID:843824 KEGG:ath:AT1G74850
GeneFarm:4803 TAIR:At1g74850 eggNOG:NOG288369 HOGENOM:HOG000029475
InParanoid:Q9S7Q2 OMA:GSIARCL PhylomeDB:Q9S7Q2
ProtClustDB:CLSN2682291 Genevestigator:Q9S7Q2 GO:GO:0042793
Uniprot:Q9S7Q2
Length = 862
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 38/103 (36%), Positives = 52/103 (50%)
Query: 69 EMQQILHQLKHDTRVI---PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL 125
+ Q+ L K+ R I P E I+ +IS GR LL+ L+VFDEMPS V R+V S
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179
Query: 126 NTLLNALLTCGK-------LDRMKELFISFNLKAIAVLDGLCS 161
L+NA G+ LDRMK IS ++ + C+
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
>TAIR|locus:2012883 [details] [associations]
symbol:AT1G20300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC026234 Pfam:PF12854 Pfam:PF13041
EMBL:AF446865 EMBL:AY052274 IPI:IPI00526119 PIR:F86336
RefSeq:NP_564110.1 UniGene:At.26508 ProteinModelPortal:Q9LN22
PRIDE:Q9LN22 EnsemblPlants:AT1G20300.1 GeneID:838618
KEGG:ath:AT1G20300 GeneFarm:4848 TAIR:At1g20300 eggNOG:NOG269752
HOGENOM:HOG000243285 InParanoid:Q9LN22 OMA:FRRMEEY PhylomeDB:Q9LN22
ProtClustDB:CLSN2687879 Genevestigator:Q9LN22 Uniprot:Q9LN22
Length = 537
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEM 113
+ ++I+ L R + E Q LK R P+ I++ N++ + RA + A +VF EM
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSLKD--RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 114 PSFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145
++ V + + +++AL CG++ R ++F
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
>TAIR|locus:2049756 [details] [associations]
symbol:AT2G37230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005896
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0009535 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:BT005729
EMBL:AK228383 IPI:IPI00535957 PIR:B84790 RefSeq:NP_181260.1
UniGene:At.37453 ProteinModelPortal:Q9ZUU3 SMR:Q9ZUU3 PaxDb:Q9ZUU3
PRIDE:Q9ZUU3 EnsemblPlants:AT2G37230.1 GeneID:818300
KEGG:ath:AT2G37230 GeneFarm:4948 TAIR:At2g37230 eggNOG:NOG261815
HOGENOM:HOG000077475 InParanoid:Q9ZUU3 OMA:QTASRVM PhylomeDB:Q9ZUU3
ProtClustDB:CLSN2683968 Genevestigator:Q9ZUU3 Uniprot:Q9ZUU3
Length = 757
Score = 112 (44.5 bits), Expect = 0.00043, P = 0.00043
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQ----LKHDTRVIP-EEIIFCNVISFYGRARL 102
R L+ +D T + KM E+ ++ H L + +P +E +F +I YG+A +
Sbjct: 142 RSGLIRHDRD-THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGI 200
Query: 103 LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145
++ ++++F +M V+RT+KS N+L +L G+ K F
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
>TAIR|locus:2027212 [details] [associations]
symbol:AT1G74750 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008263 Pfam:PF01535 TIGRFAMs:TIGR00756 SMART:SM00463
PROSITE:PS50828 Pfam:PF12854 Pfam:PF13041 IPI:IPI00523343
PIR:G96776 RefSeq:NP_177613.1 UniGene:At.52517
ProteinModelPortal:Q9SSF9 SMR:Q9SSF9 STRING:Q9SSF9 PaxDb:Q9SSF9
EnsemblPlants:AT1G74750.1 GeneID:843814 KEGG:ath:AT1G74750
GeneFarm:4802 TAIR:At1g74750 eggNOG:NOG323562 HOGENOM:HOG000244210
InParanoid:Q9SSF9 OMA:SKRGLMD PhylomeDB:Q9SSF9
ProtClustDB:CLSN2682280 Genevestigator:Q9SSF9 Uniprot:Q9SSF9
Length = 855
Score = 111 (44.1 bits), Expect = 0.00067, P = 0.00067
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 47 FRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHA 106
F+++ Y ++ LGRAK F E+ ++L ++ D P + + +I YGRA L+ A
Sbjct: 355 FKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDG-CKPNTVTYNRLIHSYGRANYLKEA 413
Query: 107 LQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145
+ VF++M + + TL++ G LD +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
>TAIR|locus:2130354 [details] [associations]
symbol:AT4G14820 "AT4G14820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00529570 PIR:C71411
RefSeq:NP_193218.1 UniGene:At.65379 ProteinModelPortal:O23337
SMR:O23337 EnsemblPlants:AT4G14820.1 GeneID:827139
KEGG:ath:AT4G14820 GeneFarm:3141 TAIR:At4g14820 eggNOG:NOG309125
InParanoid:O23337 OMA:VLWHSEK PhylomeDB:O23337
ProtClustDB:CLSN2685361 Genevestigator:O23337 Uniprot:O23337
Length = 722
Score = 110 (43.8 bits), Expect = 0.00073, P = 0.00073
Identities = 27/125 (21%), Positives = 64/125 (51%)
Query: 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQV 109
+++ ++ +I + R + DE ++ ++K D+ V+P+E+I CN++S GR + + +
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMK-DSNVMPDEMILCNIVSACGRTGNMRYNRAI 234
Query: 110 FDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKII--M 167
++ + +V+ L L+ G +D +E F +++ + V + S +
Sbjct: 235 YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRL 294
Query: 168 NDSQV 172
+D+QV
Sbjct: 295 DDAQV 299
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 176 0.00081 109 3 11 22 0.49 31
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 554 (59 KB)
Total size of DFA: 136 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.04u 0.19s 19.23t Elapsed: 00:00:01
Total cpu time: 19.04u 0.19s 19.23t Elapsed: 00:00:01
Start: Mon May 20 17:10:17 2013 End: Mon May 20 17:10:18 2013