Query 036589
Match_columns 176
No_of_seqs 153 out of 1260
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 05:12:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 100.0 7.3E-36 2.5E-40 233.3 14.6 156 8-175 28-192 (501)
2 4g26_A Pentatricopeptide repea 100.0 7.7E-35 2.6E-39 227.5 14.9 158 3-172 58-224 (501)
3 3spa_A Mtrpol, DNA-directed RN 99.9 2.7E-26 9.3E-31 187.2 10.3 124 48-172 124-250 (1134)
4 3spa_A Mtrpol, DNA-directed RN 99.9 4.4E-27 1.5E-31 191.8 -0.3 157 7-172 128-286 (1134)
5 2xpi_A Anaphase-promoting comp 99.7 8.7E-17 3E-21 127.0 12.4 156 5-175 372-533 (597)
6 2xpi_A Anaphase-promoting comp 99.7 7.9E-17 2.7E-21 127.2 12.2 156 5-175 406-567 (597)
7 3as5_A MAMA; tetratricopeptide 99.4 3E-11 1E-15 80.9 17.2 152 8-175 10-161 (186)
8 1w3b_A UDP-N-acetylglucosamine 99.4 8E-12 2.7E-16 93.9 14.9 119 51-174 237-355 (388)
9 1w3b_A UDP-N-acetylglucosamine 99.4 9.9E-12 3.4E-16 93.4 14.0 153 7-175 170-322 (388)
10 3mkr_A Coatomer subunit epsilo 99.4 1.6E-11 5.5E-16 89.6 14.7 146 8-175 103-251 (291)
11 2y4t_A DNAJ homolog subfamily 99.4 4.5E-12 1.5E-16 96.7 12.2 153 7-175 27-194 (450)
12 2pl2_A Hypothetical conserved 99.4 8.6E-12 2.9E-16 87.1 11.7 155 5-176 38-203 (217)
13 2vq2_A PILW, putative fimbrial 99.4 2.7E-11 9.3E-16 83.7 14.1 155 6-175 8-164 (225)
14 2ho1_A Type 4 fimbrial biogene 99.4 2.2E-11 7.7E-16 86.0 13.2 119 51-173 105-224 (252)
15 2ho1_A Type 4 fimbrial biogene 99.4 3.8E-11 1.3E-15 84.8 14.4 154 7-175 38-192 (252)
16 2q7f_A YRRB protein; TPR, prot 99.4 2.6E-11 8.9E-16 84.9 13.4 154 6-175 57-210 (243)
17 2pl2_A Hypothetical conserved 99.3 2.8E-11 9.6E-16 84.4 12.8 156 3-175 2-168 (217)
18 2y4t_A DNAJ homolog subfamily 99.3 1.4E-11 4.7E-16 94.0 11.7 155 4-175 58-228 (450)
19 2q7f_A YRRB protein; TPR, prot 99.3 2.3E-11 8E-16 85.2 11.8 156 4-175 21-176 (243)
20 2vq2_A PILW, putative fimbrial 99.3 4.6E-11 1.6E-15 82.5 12.7 155 6-174 42-198 (225)
21 3vtx_A MAMA; tetratricopeptide 99.3 4E-11 1.4E-15 81.0 11.8 154 6-175 5-158 (184)
22 2fo7_A Synthetic consensus TPR 99.3 9.7E-11 3.3E-15 74.2 12.5 131 8-152 3-133 (136)
23 4eqf_A PEX5-related protein; a 99.3 9.8E-12 3.4E-16 92.6 8.7 167 5-175 132-298 (365)
24 4eqf_A PEX5-related protein; a 99.3 9.8E-11 3.4E-15 87.1 13.0 155 6-175 65-264 (365)
25 3mkr_A Coatomer subunit epsilo 99.3 4E-11 1.4E-15 87.5 10.0 150 6-175 65-217 (291)
26 4gyw_A UDP-N-acetylglucosamine 99.3 2.3E-10 7.8E-15 93.1 15.3 155 6-176 9-163 (723)
27 3uq3_A Heat shock protein STI1 99.2 1.1E-10 3.8E-15 82.2 11.2 161 4-175 36-224 (258)
28 1fch_A Peroxisomal targeting s 99.2 1.9E-10 6.4E-15 85.4 12.8 122 50-175 216-347 (368)
29 1fch_A Peroxisomal targeting s 99.2 8.1E-10 2.8E-14 81.9 16.2 154 6-174 64-267 (368)
30 3hym_B Cell division cycle pro 99.2 3.9E-10 1.3E-14 82.2 14.2 156 5-175 89-253 (330)
31 1b89_A Protein (clathrin heavy 99.2 7.2E-13 2.5E-17 101.1 -0.5 139 4-175 30-194 (449)
32 1b89_A Protein (clathrin heavy 99.2 5.1E-12 1.7E-16 96.5 4.2 151 4-176 59-225 (449)
33 3hym_B Cell division cycle pro 99.2 3.1E-10 1.1E-14 82.7 13.4 154 6-175 56-210 (330)
34 3uq3_A Heat shock protein STI1 99.2 2.7E-10 9.3E-15 80.2 10.5 154 8-175 7-190 (258)
35 3cv0_A Peroxisome targeting si 99.2 3.1E-10 1E-14 82.6 10.8 145 16-175 148-303 (327)
36 2fo7_A Synthetic consensus TPR 99.2 1.4E-09 4.9E-14 68.6 12.7 119 52-175 2-120 (136)
37 3u4t_A TPR repeat-containing p 99.1 1.8E-08 6E-13 71.7 18.9 156 5-173 36-191 (272)
38 3as5_A MAMA; tetratricopeptide 99.1 1.1E-09 3.7E-14 73.2 11.5 134 5-152 41-174 (186)
39 1hh8_A P67PHOX, NCF-2, neutrop 99.1 5.3E-09 1.8E-13 71.9 15.2 145 7-168 7-166 (213)
40 3ieg_A DNAJ homolog subfamily 99.1 1.2E-09 4.2E-14 80.2 12.2 150 8-174 39-204 (359)
41 3ieg_A DNAJ homolog subfamily 99.1 2.6E-09 9E-14 78.5 13.9 152 7-175 4-171 (359)
42 3cv0_A Peroxisome targeting si 99.1 4.3E-09 1.5E-13 76.5 14.8 155 5-174 20-222 (327)
43 4abn_A Tetratricopeptide repea 99.1 6.4E-10 2.2E-14 86.3 9.8 152 6-174 137-308 (474)
44 3fp2_A TPR repeat-containing p 99.1 1.8E-09 6.2E-14 83.9 12.0 151 8-175 245-395 (537)
45 2lni_A Stress-induced-phosphop 99.1 2.1E-08 7.1E-13 63.4 15.0 124 45-173 10-133 (133)
46 3nf1_A KLC 1, kinesin light ch 99.1 1.5E-09 5.1E-14 78.4 10.8 166 7-175 28-212 (311)
47 2gw1_A Mitochondrial precursor 99.1 7.6E-10 2.6E-14 85.4 9.7 154 6-174 304-465 (514)
48 4abn_A Tetratricopeptide repea 99.1 7.9E-10 2.7E-14 85.8 9.3 154 5-175 101-275 (474)
49 1na0_A Designed protein CTPR3; 99.1 1.7E-08 5.8E-13 62.9 14.0 117 50-171 8-124 (125)
50 2gw1_A Mitochondrial precursor 99.0 1.1E-09 3.7E-14 84.5 9.6 152 7-175 238-389 (514)
51 3edt_B KLC 2, kinesin light ch 99.0 1.4E-09 4.8E-14 77.3 9.4 142 7-151 44-198 (283)
52 2vyi_A SGTA protein; chaperone 99.0 1.8E-08 6.2E-13 63.2 13.6 123 48-175 9-131 (131)
53 4ga2_A E3 SUMO-protein ligase 99.0 1.5E-09 5.3E-14 71.3 8.7 144 14-173 5-149 (150)
54 4i17_A Hypothetical protein; T 99.0 5.8E-09 2E-13 72.7 12.1 153 5-173 6-168 (228)
55 3nf1_A KLC 1, kinesin light ch 99.0 2.1E-09 7.1E-14 77.7 9.7 140 8-150 71-223 (311)
56 1xnf_A Lipoprotein NLPI; TPR, 99.0 7.8E-09 2.7E-13 73.5 12.4 129 7-150 44-172 (275)
57 3u4t_A TPR repeat-containing p 99.0 7.4E-09 2.5E-13 73.6 12.2 150 5-169 2-154 (272)
58 2ond_A Cleavage stimulation fa 99.0 7.1E-09 2.4E-13 75.8 12.1 153 7-175 100-258 (308)
59 2h6f_A Protein farnesyltransfe 99.0 4.8E-09 1.6E-13 79.4 11.1 150 8-173 99-250 (382)
60 3vtx_A MAMA; tetratricopeptide 99.0 9.4E-09 3.2E-13 69.2 11.6 133 5-151 38-170 (184)
61 2r5s_A Uncharacterized protein 99.0 1.4E-08 4.8E-13 68.2 12.2 154 7-175 7-161 (176)
62 1xnf_A Lipoprotein NLPI; TPR, 99.0 4.5E-09 1.5E-13 74.7 10.2 128 16-153 15-142 (275)
63 2ond_A Cleavage stimulation fa 98.9 6.3E-08 2.2E-12 70.8 14.4 153 7-175 51-220 (308)
64 2vsy_A XCC0866; transferase, g 98.9 3E-08 1E-12 78.4 13.5 137 19-171 2-138 (568)
65 3fp2_A TPR repeat-containing p 98.9 1.2E-08 4.1E-13 79.3 10.5 119 52-174 345-478 (537)
66 3qky_A Outer membrane assembly 98.9 3.4E-08 1.2E-12 70.3 12.0 155 7-171 16-198 (261)
67 3qou_A Protein YBBN; thioredox 98.9 1.9E-08 6.3E-13 73.1 10.7 152 9-175 120-272 (287)
68 3mv2_B Coatomer subunit epsilo 98.9 5.2E-08 1.8E-12 71.4 12.8 155 4-173 98-270 (310)
69 4gco_A Protein STI-1; structur 98.9 2E-07 6.9E-12 59.3 13.9 110 51-165 13-122 (126)
70 3edt_B KLC 2, kinesin light ch 98.9 1.1E-08 3.6E-13 72.7 8.6 156 16-175 11-186 (283)
71 1ouv_A Conserved hypothetical 98.9 1.1E-07 3.6E-12 68.0 13.8 124 8-151 8-143 (273)
72 3sz7_A HSC70 cochaperone (SGT) 98.8 2.5E-07 8.4E-12 61.2 13.9 118 48-168 8-125 (164)
73 4i17_A Hypothetical protein; T 98.8 3E-07 1E-11 63.9 14.3 121 50-174 6-133 (228)
74 4gyw_A UDP-N-acetylglucosamine 98.8 8.8E-08 3E-12 78.0 13.0 121 50-175 8-128 (723)
75 1a17_A Serine/threonine protei 98.8 1.1E-07 3.7E-12 62.4 11.3 129 8-150 15-145 (166)
76 2vsy_A XCC0866; transferase, g 98.8 9.6E-08 3.3E-12 75.5 12.6 135 6-154 23-160 (568)
77 1ouv_A Conserved hypothetical 98.8 5.2E-07 1.8E-11 64.4 15.3 139 8-170 40-194 (273)
78 1elw_A TPR1-domain of HOP; HOP 98.8 7.6E-07 2.6E-11 54.6 14.2 111 50-165 3-113 (118)
79 2h6f_A Protein farnesyltransfe 98.8 3.6E-08 1.2E-12 74.6 9.2 152 5-172 130-288 (382)
80 2dba_A Smooth muscle cell asso 98.8 1.6E-06 5.3E-11 55.6 15.8 115 48-168 25-143 (148)
81 3u3w_A Transcriptional activat 98.8 2.9E-07 9.9E-12 66.7 13.6 153 12-173 81-251 (293)
82 2ooe_A Cleavage stimulation fa 98.7 6.9E-07 2.4E-11 69.9 16.2 152 7-174 273-441 (530)
83 3upv_A Heat shock protein STI1 98.7 7.7E-07 2.6E-11 56.0 13.4 100 50-152 3-102 (126)
84 3gyz_A Chaperone protein IPGC; 98.7 2.9E-07 1E-11 60.6 11.6 102 50-154 35-136 (151)
85 2vgx_A Chaperone SYCD; alterna 98.7 8E-07 2.7E-11 58.1 13.4 109 50-161 20-128 (148)
86 1a17_A Serine/threonine protei 98.7 4.7E-07 1.6E-11 59.3 12.4 119 50-173 12-132 (166)
87 2yhc_A BAMD, UPF0169 lipoprote 98.7 2E-07 7E-12 65.0 11.2 158 8-175 6-201 (225)
88 4ga2_A E3 SUMO-protein ligase 98.7 5.9E-08 2E-12 63.6 7.8 115 57-176 3-117 (150)
89 2e2e_A Formate-dependent nitri 98.7 9.1E-08 3.1E-12 64.0 9.0 125 16-154 20-147 (177)
90 1na0_A Designed protein CTPR3; 98.7 2.2E-07 7.6E-12 57.6 10.2 113 7-133 10-122 (125)
91 1elr_A TPR2A-domain of HOP; HO 98.7 4.5E-07 1.5E-11 56.8 11.5 116 50-170 3-124 (131)
92 2pzi_A Probable serine/threoni 98.7 7.2E-08 2.5E-12 78.1 9.4 150 17-175 402-551 (681)
93 2pzi_A Probable serine/threoni 98.7 3.3E-08 1.1E-12 80.0 7.4 151 6-173 433-583 (681)
94 2ooe_A Cleavage stimulation fa 98.7 3.8E-07 1.3E-11 71.4 13.0 154 6-174 321-479 (530)
95 2lni_A Stress-induced-phosphop 98.7 1.7E-07 5.7E-12 59.1 9.0 116 7-136 17-132 (133)
96 2xcb_A PCRH, regulatory protei 98.7 1.3E-06 4.5E-11 56.3 13.4 101 50-153 17-117 (142)
97 1qqe_A Vesicular transport pro 98.7 1.7E-07 5.8E-12 68.0 10.1 161 9-175 40-216 (292)
98 2kck_A TPR repeat; tetratricop 98.7 3.1E-07 1.1E-11 55.9 9.4 102 50-154 5-109 (112)
99 2vyi_A SGTA protein; chaperone 98.7 3.2E-07 1.1E-11 57.4 9.7 118 7-138 13-130 (131)
100 1p5q_A FKBP52, FK506-binding p 98.6 6.1E-07 2.1E-11 66.6 12.5 121 50-174 146-280 (336)
101 3qky_A Outer membrane assembly 98.6 3.9E-07 1.3E-11 64.7 10.9 159 7-173 53-247 (261)
102 2fbn_A 70 kDa peptidylprolyl i 98.6 1.8E-07 6.1E-12 63.8 8.7 149 10-172 8-170 (198)
103 3gw4_A Uncharacterized protein 98.6 4.6E-07 1.6E-11 61.4 10.7 149 16-175 2-164 (203)
104 1hh8_A P67PHOX, NCF-2, neutrop 98.6 1.2E-06 4E-11 60.0 12.7 119 51-175 6-138 (213)
105 3q49_B STIP1 homology and U bo 98.6 1.8E-06 6.2E-11 54.8 12.7 101 48-151 6-106 (137)
106 1p5q_A FKBP52, FK506-binding p 98.6 3.2E-07 1.1E-11 68.1 10.2 131 8-149 149-292 (336)
107 3ulq_A Response regulator aspa 98.6 7.8E-07 2.7E-11 66.6 12.0 157 12-175 109-281 (383)
108 2qfc_A PLCR protein; TPR, HTH, 98.6 3E-06 1E-10 61.3 14.3 158 9-175 78-253 (293)
109 2kck_A TPR repeat; tetratricop 98.6 3.5E-07 1.2E-11 55.7 7.8 105 2-117 2-107 (112)
110 3k9i_A BH0479 protein; putativ 98.6 2.2E-07 7.5E-12 58.0 6.9 106 63-170 2-109 (117)
111 2r5s_A Uncharacterized protein 98.6 3.6E-06 1.2E-10 56.2 13.3 131 6-150 40-172 (176)
112 4gcn_A Protein STI-1; structur 98.6 1.4E-06 4.7E-11 55.4 10.5 109 51-164 8-122 (127)
113 1qqe_A Vesicular transport pro 98.5 7.6E-07 2.6E-11 64.6 10.3 139 7-151 78-228 (292)
114 3urz_A Uncharacterized protein 98.5 2E-06 6.9E-11 59.2 12.0 115 51-171 4-135 (208)
115 4f3v_A ESX-1 secretion system 98.5 5.1E-06 1.7E-10 60.1 14.1 137 12-165 108-248 (282)
116 3q15_A PSP28, response regulat 98.5 1.4E-06 4.7E-11 65.3 11.7 155 14-175 109-278 (378)
117 3urz_A Uncharacterized protein 98.5 3.8E-07 1.3E-11 62.9 7.9 109 12-134 10-134 (208)
118 3n71_A Histone lysine methyltr 98.5 3.1E-07 1.1E-11 71.6 7.6 135 14-151 317-464 (490)
119 2qfc_A PLCR protein; TPR, HTH, 98.5 3.5E-06 1.2E-10 61.0 12.4 132 11-149 120-264 (293)
120 3ulq_A Response regulator aspa 98.5 5.3E-07 1.8E-11 67.6 8.2 160 8-175 186-356 (383)
121 3gyz_A Chaperone protein IPGC; 98.5 1.8E-06 6.3E-11 56.7 9.7 100 8-122 38-137 (151)
122 2dba_A Smooth muscle cell asso 98.5 2.4E-06 8.3E-11 54.7 9.9 97 6-116 28-128 (148)
123 4gco_A Protein STI-1; structur 98.4 2.2E-06 7.4E-11 54.4 9.3 96 9-117 16-111 (126)
124 2xev_A YBGF; tetratricopeptide 98.4 2.1E-05 7E-10 49.2 13.9 97 55-153 6-107 (129)
125 4a1s_A PINS, partner of inscut 98.4 3.8E-07 1.3E-11 68.6 6.5 163 8-175 88-280 (411)
126 3rjv_A Putative SEL1 repeat pr 98.4 8.4E-06 2.9E-10 56.3 12.8 145 5-170 17-174 (212)
127 1elw_A TPR1-domain of HOP; HOP 98.4 5.8E-06 2E-10 50.5 10.7 98 7-117 5-102 (118)
128 3ro3_A PINS homolog, G-protein 98.4 1.3E-06 4.3E-11 56.5 7.7 138 8-150 11-157 (164)
129 3q15_A PSP28, response regulat 98.4 4.9E-06 1.7E-10 62.2 11.9 159 8-172 143-314 (378)
130 1xi4_A Clathrin heavy chain; a 98.4 6.5E-06 2.2E-10 70.8 13.6 116 6-147 1105-1220(1630)
131 4a1s_A PINS, partner of inscut 98.4 6.3E-07 2.2E-11 67.3 6.8 157 10-175 52-240 (411)
132 1elr_A TPR2A-domain of HOP; HO 98.4 1.1E-06 3.9E-11 54.8 7.0 111 8-131 6-121 (131)
133 1hxi_A PEX5, peroxisome target 98.4 5.5E-06 1.9E-10 52.1 10.1 97 53-152 19-115 (121)
134 3sf4_A G-protein-signaling mod 98.4 3.4E-06 1.1E-10 62.9 10.6 162 8-174 189-363 (406)
135 3mv2_B Coatomer subunit epsilo 98.4 9.1E-06 3.1E-10 59.5 12.4 121 49-175 98-228 (310)
136 2fbn_A 70 kDa peptidylprolyl i 98.4 2.4E-06 8.2E-11 58.1 8.9 133 9-150 41-185 (198)
137 3gw4_A Uncharacterized protein 98.4 3E-06 1E-10 57.3 9.4 139 7-150 27-175 (203)
138 2ifu_A Gamma-SNAP; membrane fu 98.4 9E-07 3.1E-11 64.6 7.1 161 8-174 38-211 (307)
139 3qou_A Protein YBBN; thioredox 98.4 7.6E-06 2.6E-10 59.2 11.5 131 6-150 151-283 (287)
140 1kt0_A FKBP51, 51 kDa FK506-bi 98.3 5.6E-06 1.9E-10 63.9 11.3 121 50-173 267-400 (457)
141 2c2l_A CHIP, carboxy terminus 98.3 2.3E-05 7.8E-10 56.5 13.7 99 50-151 3-101 (281)
142 3q49_B STIP1 homology and U bo 98.3 1.8E-06 6.3E-11 54.8 7.1 100 3-115 6-105 (137)
143 2yhc_A BAMD, UPF0169 lipoprote 98.3 1E-05 3.5E-10 56.2 11.5 137 8-154 43-216 (225)
144 3sf4_A G-protein-signaling mod 98.3 2.5E-06 8.7E-11 63.6 8.7 163 8-175 129-324 (406)
145 3ro2_A PINS homolog, G-protein 98.3 3E-06 1E-10 61.2 8.7 158 9-175 8-200 (338)
146 1ihg_A Cyclophilin 40; ppiase 98.3 1.3E-05 4.6E-10 60.2 12.0 120 51-173 223-356 (370)
147 3u3w_A Transcriptional activat 98.3 2.1E-05 7.2E-10 56.8 12.6 123 53-175 77-213 (293)
148 3rkv_A Putative peptidylprolyl 98.3 2.6E-05 8.8E-10 51.2 12.0 104 50-154 10-129 (162)
149 3ro2_A PINS homolog, G-protein 98.3 1E-06 3.4E-11 63.8 5.5 164 7-175 44-240 (338)
150 1wao_1 Serine/threonine protei 98.3 7E-06 2.4E-10 63.8 10.5 113 58-175 13-127 (477)
151 1wao_1 Serine/threonine protei 98.3 1.3E-06 4.6E-11 67.8 5.9 121 12-146 12-134 (477)
152 2vgx_A Chaperone SYCD; alterna 98.2 6.2E-06 2.1E-10 53.8 8.1 96 8-116 23-118 (148)
153 3upv_A Heat shock protein STI1 98.2 7.9E-06 2.7E-10 51.2 8.3 96 8-116 6-101 (126)
154 3sz7_A HSC70 cochaperone (SGT) 98.2 1.4E-05 4.7E-10 52.6 9.8 97 7-116 12-108 (164)
155 2xcb_A PCRH, regulatory protei 98.2 7.5E-06 2.6E-10 52.7 8.1 96 8-116 20-115 (142)
156 1hxi_A PEX5, peroxisome target 98.2 8.5E-06 2.9E-10 51.2 8.0 97 7-116 18-114 (121)
157 2e2e_A Formate-dependent nitri 98.2 5E-06 1.7E-10 55.3 7.2 109 62-175 21-132 (177)
158 2ifu_A Gamma-SNAP; membrane fu 98.2 3.8E-05 1.3E-09 56.0 12.2 135 8-149 78-222 (307)
159 2xev_A YBGF; tetratricopeptide 98.2 2.8E-05 9.5E-10 48.6 10.2 101 8-116 4-105 (129)
160 1hz4_A MALT regulatory protein 98.2 6.4E-05 2.2E-09 55.8 13.5 160 8-174 137-309 (373)
161 4g1t_A Interferon-induced prot 98.2 5.5E-05 1.9E-09 57.8 13.2 153 7-169 52-220 (472)
162 1kt0_A FKBP51, 51 kDa FK506-bi 98.1 1.4E-05 4.8E-10 61.7 9.6 130 8-149 270-413 (457)
163 2if4_A ATFKBP42; FKBP-like, al 98.1 6.6E-06 2.3E-10 61.0 7.2 129 9-153 182-330 (338)
164 4gcn_A Protein STI-1; structur 98.1 1.3E-05 4.3E-10 50.8 7.6 105 8-125 10-119 (127)
165 3rjv_A Putative SEL1 repeat pr 98.1 4.3E-05 1.5E-09 52.6 10.7 130 8-154 52-200 (212)
166 3k9i_A BH0479 protein; putativ 98.1 6E-06 2E-10 51.3 5.7 89 18-116 2-90 (117)
167 2xm6_A Protein corresponding t 98.1 0.00015 5E-09 56.2 14.0 112 19-150 56-179 (490)
168 2kat_A Uncharacterized protein 98.1 3.1E-05 1.1E-09 47.7 8.4 99 69-170 3-101 (115)
169 3ro3_A PINS homolog, G-protein 98.1 2.5E-05 8.4E-10 50.2 8.2 126 50-175 8-146 (164)
170 4g1t_A Interferon-induced prot 98.1 3.2E-05 1.1E-09 59.1 10.1 156 6-175 247-447 (472)
171 2l6j_A TPR repeat-containing p 98.1 6.7E-05 2.3E-09 45.4 9.8 65 50-116 3-67 (111)
172 2xm6_A Protein corresponding t 98.0 0.00029 9.9E-09 54.5 15.3 125 8-152 77-217 (490)
173 1xi4_A Clathrin heavy chain; a 98.0 0.00013 4.4E-09 63.1 13.9 134 8-170 1169-1326(1630)
174 1na3_A Designed protein CTPR2; 98.0 8.2E-05 2.8E-09 43.3 9.6 62 89-151 11-72 (91)
175 2hr2_A Hypothetical protein; a 98.0 0.00014 4.9E-09 48.0 11.3 114 51-165 11-149 (159)
176 1hz4_A MALT regulatory protein 98.0 5.9E-05 2E-09 56.0 10.7 154 13-175 21-191 (373)
177 1ihg_A Cyclophilin 40; ppiase 98.0 3E-05 1E-09 58.3 9.0 132 9-143 226-362 (370)
178 3ma5_A Tetratricopeptide repea 98.0 4.6E-05 1.6E-09 46.0 8.2 63 50-114 6-68 (100)
179 3n71_A Histone lysine methyltr 98.0 8.3E-05 2.8E-09 58.0 11.3 112 61-172 319-449 (490)
180 2l6j_A TPR repeat-containing p 98.0 9.4E-06 3.2E-10 49.4 4.9 89 86-175 3-95 (111)
181 2if4_A ATFKBP42; FKBP-like, al 97.9 4.6E-05 1.6E-09 56.4 8.5 109 51-165 179-305 (338)
182 3qwp_A SET and MYND domain-con 97.9 0.00025 8.6E-09 54.4 12.3 105 56-160 292-414 (429)
183 4b4t_Q 26S proteasome regulato 97.9 0.0003 1E-08 53.1 12.4 162 13-175 11-192 (434)
184 2c2l_A CHIP, carboxy terminus 97.8 5.6E-05 1.9E-09 54.5 7.4 96 7-115 5-100 (281)
185 3rkv_A Putative peptidylprolyl 97.8 0.00012 4.2E-09 47.8 8.5 105 9-116 14-126 (162)
186 1na3_A Designed protein CTPR2; 97.8 0.00043 1.5E-08 40.1 9.6 82 50-134 8-89 (91)
187 3qww_A SET and MYND domain-con 97.8 0.00012 4E-09 56.3 8.6 97 64-160 311-425 (433)
188 4f3v_A ESX-1 secretion system 97.8 0.00034 1.2E-08 50.6 10.3 118 53-175 104-225 (282)
189 3qwp_A SET and MYND domain-con 97.7 0.00011 3.8E-09 56.4 7.4 100 12-114 293-398 (429)
190 4b4t_Q 26S proteasome regulato 97.7 0.00041 1.4E-08 52.3 10.0 157 9-174 58-232 (434)
191 1klx_A Cysteine rich protein B 97.6 0.00018 6.2E-09 46.1 6.7 115 18-154 7-129 (138)
192 4e6h_A MRNA 3'-END-processing 97.6 0.00029 1E-08 57.1 8.9 162 8-174 380-557 (679)
193 2kat_A Uncharacterized protein 97.6 0.00032 1.1E-08 43.0 7.3 64 50-115 18-81 (115)
194 4e6h_A MRNA 3'-END-processing 97.6 0.00062 2.1E-08 55.2 10.6 152 8-173 345-519 (679)
195 3qww_A SET and MYND domain-con 97.5 8.8E-05 3E-09 57.0 4.4 94 19-115 311-410 (433)
196 3ma5_A Tetratricopeptide repea 97.5 0.00092 3.1E-08 40.1 8.0 87 86-173 6-92 (100)
197 1dce_A Protein (RAB geranylger 97.4 0.0032 1.1E-07 50.0 12.3 151 8-174 65-242 (567)
198 3dra_A Protein farnesyltransfe 97.4 0.0022 7.5E-08 46.9 10.5 152 6-173 67-235 (306)
199 3e4b_A ALGK; tetratricopeptide 97.4 0.0038 1.3E-07 47.9 12.2 125 5-149 175-314 (452)
200 3e4b_A ALGK; tetratricopeptide 97.3 0.0098 3.4E-07 45.6 14.2 122 10-154 217-354 (452)
201 2hr2_A Hypothetical protein; a 97.3 0.0012 4.2E-08 43.5 7.7 84 88-175 12-119 (159)
202 2kc7_A BFR218_protein; tetratr 97.3 0.0033 1.1E-07 37.0 8.8 58 57-116 6-64 (99)
203 3dra_A Protein farnesyltransfe 97.2 0.0049 1.7E-07 45.1 10.8 149 5-167 143-302 (306)
204 1zu2_A Mitochondrial import re 97.2 0.0021 7.1E-08 42.3 7.6 103 62-170 13-136 (158)
205 2kc7_A BFR218_protein; tetratr 97.1 0.0016 5.4E-08 38.5 6.1 61 93-154 6-67 (99)
206 3q7a_A Farnesyltransferase alp 97.1 0.0085 2.9E-07 44.6 11.0 149 8-172 90-256 (349)
207 3mkq_A Coatomer beta'-subunit; 97.1 0.0088 3E-07 48.7 11.9 102 15-148 661-762 (814)
208 3mkq_B Coatomer subunit alpha; 96.9 0.025 8.7E-07 37.8 10.9 55 10-80 9-63 (177)
209 2uy1_A Cleavage stimulation fa 96.8 0.045 1.5E-06 42.6 13.6 125 8-150 288-412 (493)
210 1pc2_A Mitochondria fission pr 96.8 0.029 9.9E-07 36.6 10.3 86 66-154 13-103 (152)
211 3ly7_A Transcriptional activat 96.7 0.017 6E-07 43.2 9.6 142 5-162 193-347 (372)
212 1zu2_A Mitochondrial import re 96.6 0.003 1E-07 41.5 4.6 100 16-131 12-133 (158)
213 3q7a_A Farnesyltransferase alp 96.6 0.12 4.1E-06 38.5 13.5 141 17-173 65-216 (349)
214 2v5f_A Prolyl 4-hydroxylase su 96.5 0.039 1.3E-06 33.2 9.2 66 50-115 4-74 (104)
215 3dss_A Geranylgeranyl transfer 96.4 0.072 2.5E-06 39.4 11.2 132 22-169 90-238 (331)
216 1dce_A Protein (RAB geranylger 96.2 0.14 4.9E-06 40.6 12.9 138 17-170 39-190 (567)
217 3bee_A Putative YFRE protein; 96.2 0.082 2.8E-06 31.2 9.2 66 49-116 4-72 (93)
218 2v5f_A Prolyl 4-hydroxylase su 96.1 0.048 1.7E-06 32.7 7.8 69 86-154 4-78 (104)
219 1wy6_A Hypothetical protein ST 96.0 0.15 5E-06 32.8 11.5 134 7-154 6-157 (172)
220 1klx_A Cysteine rich protein B 95.8 0.064 2.2E-06 34.0 7.8 90 12-118 31-128 (138)
221 1nzn_A CGI-135 protein, fissio 95.8 0.18 6.2E-06 31.7 10.4 106 57-165 7-117 (126)
222 3u64_A Protein TP_0956; tetrat 95.7 0.22 7.4E-06 36.1 10.9 113 49-164 152-283 (301)
223 3mkq_A Coatomer beta'-subunit; 95.4 0.2 6.7E-06 40.8 11.0 101 13-148 606-707 (814)
224 3bee_A Putative YFRE protein; 95.4 0.2 6.9E-06 29.5 9.9 68 85-153 4-74 (93)
225 3ly7_A Transcriptional activat 95.3 0.11 3.8E-06 38.9 8.5 74 48-126 274-347 (372)
226 2ff4_A Probable regulatory pro 95.1 0.12 4.2E-06 38.9 8.4 115 47-163 108-250 (388)
227 1v54_E Cytochrome C oxidase po 95.1 0.2 6.9E-06 30.2 7.5 45 69-114 28-72 (109)
228 2ff4_A Probable regulatory pro 95.0 0.13 4.4E-06 38.8 8.3 71 56-128 176-251 (388)
229 4fhn_B Nucleoporin NUP120; pro 94.7 0.74 2.5E-05 39.7 12.9 147 10-174 816-987 (1139)
230 3dss_A Geranylgeranyl transfer 94.7 0.91 3.1E-05 33.5 14.4 140 15-170 38-191 (331)
231 2uy1_A Cleavage stimulation fa 94.5 0.51 1.7E-05 36.7 10.6 93 52-148 287-380 (493)
232 1wy6_A Hypothetical protein ST 94.3 0.44 1.5E-05 30.6 8.0 84 19-119 74-157 (172)
233 1pc2_A Mitochondria fission pr 94.0 0.17 5.9E-06 32.9 5.9 66 49-116 30-100 (152)
234 4h7y_A Dual specificity protei 93.7 0.16 5.6E-06 33.0 5.3 107 1-120 8-127 (161)
235 4h7y_A Dual specificity protei 93.7 0.89 3E-05 29.6 10.4 114 50-168 12-138 (161)
236 3lvg_A Clathrin heavy chain 1; 93.3 0.0029 9.8E-08 49.2 -3.9 143 5-174 53-215 (624)
237 2y69_E Cytochrome C oxidase su 93.1 0.74 2.5E-05 29.3 7.4 61 105-167 71-131 (152)
238 4gns_B Protein CSD3, chitin bi 92.5 1.7 5.8E-05 35.8 10.8 120 53-175 250-388 (754)
239 1v54_E Cytochrome C oxidase po 92.3 0.69 2.4E-05 27.9 6.2 64 102-167 25-88 (109)
240 4fhn_B Nucleoporin NUP120; pro 91.4 4.5 0.00015 35.0 12.7 127 10-139 846-988 (1139)
241 4b4t_R RPN7, 26S proteasome re 91.2 4 0.00014 31.1 11.3 96 53-150 133-236 (429)
242 4b4t_R RPN7, 26S proteasome re 90.5 1.9 6.3E-05 32.9 8.7 99 8-114 133-235 (429)
243 3u64_A Protein TP_0956; tetrat 90.3 1.7 5.9E-05 31.5 7.9 78 50-128 198-283 (301)
244 1nzn_A CGI-135 protein, fissio 87.5 2.7 9.3E-05 26.3 6.4 67 49-116 33-103 (126)
245 1zbp_A Hypothetical protein VP 86.3 3.8 0.00013 29.2 7.4 55 59-115 5-59 (273)
246 2p58_C Putative type III secre 85.9 3.2 0.00011 25.0 5.7 89 64-163 20-108 (116)
247 2ion_A PDCD4, programmed cell 84.5 4.4 0.00015 26.2 6.5 66 53-120 11-78 (152)
248 2nsz_A Programmed cell death p 84.3 5.7 0.00019 24.8 7.6 65 53-119 9-75 (129)
249 2y69_E Cytochrome C oxidase su 83.3 6.8 0.00023 25.0 8.4 64 66-131 68-131 (152)
250 2uwj_G Type III export protein 81.8 2.9 0.0001 25.1 4.3 89 64-163 19-107 (115)
251 1y8m_A FIS1; mitochondria, unk 81.7 4.4 0.00015 26.0 5.5 47 68-115 59-105 (144)
252 3o48_A Mitochondria fission 1 81.6 3.8 0.00013 25.9 5.1 59 93-151 46-107 (134)
253 3esl_A Checkpoint serine/threo 80.9 11 0.00037 25.7 9.3 85 72-157 62-149 (202)
254 1ug3_A EIF4GI, eukaryotic prot 80.6 13 0.00045 27.3 8.6 100 9-120 14-122 (339)
255 1zbp_A Hypothetical protein VP 80.2 8.3 0.00028 27.5 7.1 98 48-151 28-129 (273)
256 3o48_A Mitochondria fission 1 79.9 9 0.00031 24.2 10.2 72 48-122 37-111 (134)
257 3ltj_A Alpharep-4; protein eng 79.8 10 0.00036 24.8 12.1 18 50-67 58-75 (201)
258 3txn_A 26S proteasome regulato 79.2 18 0.00063 27.3 11.5 136 9-150 22-167 (394)
259 3mkq_B Coatomer subunit alpha; 79.0 12 0.0004 24.9 12.9 108 6-148 34-141 (177)
260 4gns_B Protein CSD3, chitin bi 77.7 8.3 0.00029 31.8 7.3 53 60-114 346-398 (754)
261 2b7e_A PRE-mRNA processing pro 77.4 1.4 4.9E-05 23.5 1.9 28 140-168 4-31 (59)
262 3txn_A 26S proteasome regulato 76.7 15 0.00052 27.7 8.0 93 56-149 104-208 (394)
263 3esl_A Checkpoint serine/threo 76.0 16 0.00054 24.8 9.7 75 46-121 72-149 (202)
264 3ffl_A Anaphase-promoting comp 75.5 15 0.0005 24.2 9.3 97 54-150 23-150 (167)
265 3eiq_C Programmed cell death p 73.0 8.7 0.0003 28.6 5.8 78 53-132 219-298 (358)
266 1y8m_A FIS1; mitochondria, unk 72.8 16 0.00054 23.4 11.8 82 84-165 36-120 (144)
267 2nsz_A Programmed cell death p 72.3 15 0.00051 22.8 8.8 65 89-154 9-75 (129)
268 3ltm_A Alpha-REP4; protein eng 72.2 18 0.00062 23.8 12.1 18 120-137 155-172 (211)
269 3ffl_A Anaphase-promoting comp 69.5 21 0.00072 23.4 6.8 101 9-115 23-150 (167)
270 2ion_A PDCD4, programmed cell 69.5 19 0.00067 23.1 8.8 65 89-154 11-77 (152)
271 4ets_A Ferric uptake regulatio 69.3 7.5 0.00026 25.3 4.3 70 68-138 14-85 (162)
272 2fe3_A Peroxide operon regulat 68.6 19 0.00066 22.7 6.5 59 77-137 13-71 (145)
273 2fe3_A Peroxide operon regulat 67.8 19 0.00064 22.7 5.9 61 112-174 12-72 (145)
274 2xig_A Ferric uptake regulatio 66.4 16 0.00053 23.3 5.4 54 82-136 22-75 (150)
275 3lvg_A Clathrin heavy chain 1; 66.3 0.21 7E-06 39.2 -4.2 56 3-70 80-135 (624)
276 2uwj_G Type III export protein 65.8 19 0.00066 21.6 9.8 60 59-126 47-106 (115)
277 3eiq_C Programmed cell death p 65.8 28 0.00095 25.9 7.2 65 89-154 219-285 (358)
278 2xig_A Ferric uptake regulatio 65.6 22 0.00076 22.6 6.0 61 112-174 17-77 (150)
279 2fu4_A Ferric uptake regulatio 65.3 14 0.00047 20.5 4.5 11 141-151 36-46 (83)
280 4ets_A Ferric uptake regulatio 64.8 19 0.00063 23.4 5.5 69 103-173 13-84 (162)
281 2p58_C Putative type III secre 64.3 21 0.00071 21.5 10.3 60 59-126 48-107 (116)
282 3eyy_A Putative iron uptake re 64.2 17 0.00058 23.0 5.2 30 104-133 34-63 (145)
283 3ltm_A Alpha-REP4; protein eng 62.5 30 0.001 22.7 13.6 139 3-169 30-168 (211)
284 2zu6_B Programmed cell death p 62.2 33 0.0011 24.9 6.9 63 91-154 170-234 (307)
285 4a1g_A Mitotic checkpoint seri 62.0 29 0.00099 22.4 9.5 71 83-157 64-135 (152)
286 2fu4_A Ferric uptake regulatio 61.4 18 0.00061 20.1 4.5 61 76-138 7-68 (83)
287 4gq2_M Nucleoporin NUP120; bet 61.0 77 0.0026 26.9 13.4 109 57-172 816-950 (950)
288 4gq2_M Nucleoporin NUP120; bet 60.8 77 0.0026 26.9 12.6 110 10-136 814-950 (950)
289 1ug3_A EIF4GI, eukaryotic prot 60.6 12 0.0004 27.6 4.4 100 54-168 14-114 (339)
290 3eyy_A Putative iron uptake re 60.5 19 0.00063 22.8 4.9 59 112-173 9-67 (145)
291 1mzb_A Ferric uptake regulatio 60.3 16 0.00055 22.7 4.5 35 66-101 33-67 (136)
292 2d2s_A Exocyst complex compone 60.1 40 0.0014 23.4 8.6 91 56-149 23-118 (235)
293 2rg8_A Programmed cell death p 59.9 16 0.00056 23.8 4.6 60 53-114 12-72 (165)
294 2o03_A Probable zinc uptake re 59.5 17 0.00057 22.5 4.5 49 54-103 13-61 (131)
295 4b4t_P 26S proteasome regulato 59.5 56 0.0019 24.9 11.7 98 53-150 139-246 (445)
296 3mwm_A ZUR, putative metal upt 59.2 15 0.0005 23.1 4.2 56 46-103 9-64 (139)
297 1wgl_A TOLL-interacting protei 59.1 13 0.00044 19.7 3.2 22 100-121 36-57 (59)
298 2w57_A Ferric uptake regulatio 58.7 18 0.00063 23.0 4.6 34 67-101 33-66 (150)
299 3l6a_A Eukaryotic translation 58.0 12 0.00042 27.8 4.2 83 9-102 15-98 (364)
300 2f6m_A Suppressor protein STP2 57.9 20 0.00068 19.5 3.9 49 89-138 4-52 (65)
301 4fke_A Aminopeptidase N; zinc 57.1 88 0.003 26.4 12.4 94 11-116 691-787 (909)
302 2wvi_A Mitotic checkpoint seri 56.9 38 0.0013 22.1 9.8 83 72-158 48-131 (164)
303 2ko4_A Mediator of RNA polymer 56.5 10 0.00035 21.4 2.6 35 44-78 29-63 (81)
304 3rjo_A Endoplasmic reticulum a 55.4 64 0.0022 24.3 11.7 142 11-169 202-351 (419)
305 3bu8_A Telomeric repeat-bindin 55.4 48 0.0017 22.9 9.9 86 65-151 33-143 (235)
306 3f3f_C Nucleoporin NUP85; stru 55.3 41 0.0014 26.8 6.7 22 93-114 522-543 (570)
307 4a1g_A Mitotic checkpoint seri 55.2 39 0.0013 21.7 9.3 54 67-121 81-135 (152)
308 1mzb_A Ferric uptake regulatio 54.1 22 0.00074 22.1 4.3 61 77-139 9-70 (136)
309 2o03_A Probable zinc uptake re 53.1 25 0.00084 21.7 4.4 24 129-152 17-40 (131)
310 1uzc_A Hypothetical protein FL 53.0 15 0.00051 20.3 3.0 12 103-114 14-25 (71)
311 4aez_C MAD3, mitotic spindle c 51.8 56 0.0019 22.5 7.6 50 105-154 132-182 (223)
312 3ltj_A Alpharep-4; protein eng 49.9 50 0.0017 21.4 14.0 141 4-172 57-197 (201)
313 2dod_A Transcription elongatio 49.6 19 0.00064 20.6 3.1 35 103-138 16-51 (82)
314 2zu6_B Programmed cell death p 48.7 70 0.0024 23.2 6.7 95 53-149 168-268 (307)
315 1oai_A Nuclear RNA export fact 48.5 18 0.0006 19.2 2.7 25 64-88 33-57 (59)
316 3ygs_P Procaspase 9; apoptosis 48.3 39 0.0013 19.7 4.7 40 101-144 51-90 (97)
317 3pvs_A Replication-associated 48.1 90 0.0031 23.8 9.5 45 127-172 257-304 (447)
318 3f3f_C Nucleoporin NUP85; stru 47.7 93 0.0032 24.8 7.6 52 121-175 515-566 (570)
319 2wvi_A Mitotic checkpoint seri 47.6 56 0.0019 21.3 9.7 74 46-123 58-132 (164)
320 3l6a_A Eukaryotic translation 47.3 85 0.0029 23.3 8.8 65 52-117 13-78 (364)
321 3mwm_A ZUR, putative metal upt 47.2 26 0.0009 21.9 3.9 43 93-135 19-61 (139)
322 1wty_A Hypothetical protein TT 47.0 45 0.0016 20.1 4.9 75 67-149 4-79 (119)
323 2w57_A Ferric uptake regulatio 46.7 27 0.00092 22.2 3.9 63 75-139 6-69 (150)
324 3lxu_X Tripeptidyl-peptidase 2 45.9 1.5E+02 0.0052 26.5 9.2 81 89-172 1236-1331(1354)
325 2jul_A Calsenilin; EF-hand, ca 45.2 71 0.0024 21.8 12.1 22 124-145 231-252 (256)
326 1k1a_A B-cell lymphoma 3-encod 44.7 65 0.0022 21.2 6.0 86 57-147 12-101 (241)
327 3twr_A Tankyrase-2; ankyrin re 43.4 57 0.0019 20.2 5.7 115 12-146 11-129 (165)
328 1otr_A Protein CUE2; protein-p 42.8 33 0.0011 17.4 5.1 42 103-149 4-45 (49)
329 4b4t_S RPN3, 26S proteasome re 42.2 1.3E+02 0.0043 23.8 10.4 64 8-80 233-299 (523)
330 4b4t_P 26S proteasome regulato 42.1 1.1E+02 0.0038 23.2 12.8 126 19-149 29-204 (445)
331 2d2s_A Exocyst complex compone 42.1 14 0.00046 25.8 2.1 90 12-113 24-117 (235)
332 3bqo_A Telomeric repeat-bindin 41.7 53 0.0018 22.3 4.7 21 59-79 125-145 (211)
333 1zl8_A LIN-7; heterodimer, alp 41.0 24 0.00083 18.0 2.3 22 136-158 7-28 (53)
334 3ibx_A TENA, HP1287, putative 39.4 86 0.003 21.2 6.1 89 82-171 108-207 (221)
335 3us6_A Histidine-containing ph 38.3 76 0.0026 20.2 7.4 93 9-114 10-120 (153)
336 3t5v_B Nuclear mRNA export pro 37.9 84 0.0029 24.2 6.0 63 88-150 177-248 (455)
337 4aez_C MAD3, mitotic spindle c 37.7 99 0.0034 21.3 9.0 54 67-121 130-184 (223)
338 2p22_A Suppressor protein STP2 37.4 39 0.0013 22.3 3.5 54 86-140 110-163 (174)
339 1dp3_A TRAM protein; helix-loo 37.0 8.3 0.00028 20.1 0.2 39 63-102 8-46 (55)
340 2bn5_A PSI; nuclear protein, s 36.6 34 0.0012 15.7 2.8 22 58-79 9-30 (33)
341 2rg8_A Programmed cell death p 36.3 87 0.003 20.3 8.0 26 90-115 13-38 (165)
342 1s6c_A KV4 potassium channel-i 36.1 81 0.0028 19.9 11.0 65 50-114 37-102 (183)
343 3no6_A Transcriptional activat 35.7 1.1E+02 0.0037 21.2 6.3 86 83-171 125-223 (248)
344 3kae_A CDC27, possible protein 33.3 1.1E+02 0.0037 20.5 6.9 52 96-147 71-139 (242)
345 3mv2_A Coatomer subunit alpha; 33.3 1.4E+02 0.0049 21.9 9.8 66 107-172 190-257 (325)
346 2chq_A Replication factor C sm 32.9 1.2E+02 0.0043 21.1 11.1 87 68-158 164-263 (319)
347 1wxp_A THO complex subunit 1; 32.8 77 0.0026 18.9 4.2 25 89-113 76-100 (110)
348 2crb_A Nuclear receptor bindin 32.4 78 0.0027 18.5 3.9 24 90-113 18-41 (97)
349 4fn6_A Thiaminase-2, thiaminas 32.1 1.2E+02 0.0041 20.6 8.0 87 82-171 105-204 (229)
350 2jp7_A MRNA export factor MEX6 31.9 16 0.00056 19.2 0.9 12 102-113 34-45 (57)
351 3qye_A TBC1 domain family memb 31.8 88 0.003 22.6 5.1 36 82-117 218-253 (331)
352 3bqo_A Telomeric repeat-bindin 31.3 1.2E+02 0.0042 20.5 10.1 85 65-150 39-145 (211)
353 2wpv_A GET4, UPF0363 protein Y 29.9 1.6E+02 0.0055 21.4 13.1 23 121-143 133-155 (312)
354 2p22_A Suppressor protein STP2 29.2 87 0.003 20.7 4.2 50 119-170 108-157 (174)
355 3cqc_A Nuclear pore complex pr 29.1 30 0.001 24.6 2.1 43 72-114 18-61 (270)
356 1sxj_D Activator 1 41 kDa subu 29.0 1.6E+02 0.0053 21.0 10.8 96 69-169 196-309 (353)
357 3cqc_A Nuclear pore complex pr 28.5 33 0.0011 24.4 2.3 24 9-32 37-60 (270)
358 3t8k_A Uncharacterized protein 28.2 1.2E+02 0.0042 19.5 7.0 92 60-157 12-108 (186)
359 1ixm_A SPO0B, protein (sporula 28.1 65 0.0022 21.5 3.6 24 126-149 36-59 (192)
360 2ve8_A FTSK, DNA translocase F 28.0 55 0.0019 18.2 2.6 43 103-154 12-54 (73)
361 3qil_A Clathrin heavy chain 1; 27.9 39 0.0013 21.0 2.2 52 54-109 35-86 (125)
362 3hra_A Ankyrin repeat family p 27.9 1.2E+02 0.0041 19.2 5.8 16 17-32 13-28 (201)
363 2keb_A DNA polymerase subunit 27.7 1E+02 0.0034 18.3 5.3 30 107-136 29-58 (101)
364 2fv2_A RCD1 required for cell 27.4 93 0.0032 22.1 4.3 49 65-113 187-235 (268)
365 2qcx_A Transcriptional activat 27.3 1.6E+02 0.0055 20.5 6.6 84 82-171 131-228 (263)
366 4f52_E Glomulin; cullin-ring E 27.1 1.4E+02 0.0046 24.0 5.7 27 50-76 27-53 (596)
367 3kae_A CDC27, possible protein 27.0 1.5E+02 0.005 20.0 7.2 77 18-111 45-138 (242)
368 2kz2_A Calmodulin, CAM; TR2C, 26.3 91 0.0031 17.4 6.8 52 63-114 24-75 (94)
369 1iqp_A RFCS; clamp loader, ext 26.0 1.7E+02 0.0058 20.4 11.5 86 68-157 172-270 (327)
370 1rw2_A ATP-dependent DNA helic 25.9 24 0.00081 22.8 1.0 50 101-153 72-125 (152)
371 4ady_A RPN2, 26S proteasome re 24.9 3.3E+02 0.011 23.4 10.8 118 18-150 536-657 (963)
372 2dae_A KIAA0733 protein; mitog 24.9 78 0.0027 17.5 2.8 38 71-111 11-48 (75)
373 4f52_E Glomulin; cullin-ring E 24.6 1.5E+02 0.0051 23.8 5.5 66 67-133 65-132 (596)
374 3r88_A Anthranilate phosphorib 24.4 2.2E+02 0.0076 21.2 6.7 63 53-117 25-89 (377)
375 1sxj_E Activator 1 40 kDa subu 24.3 2E+02 0.0067 20.5 8.9 88 68-158 196-298 (354)
376 2qfz_A TBC1 domain family memb 24.3 2E+02 0.007 20.8 7.0 77 73-150 231-314 (345)
377 1bd8_A P19INK4D CDK4/6 inhibit 24.0 1.3E+02 0.0043 18.2 4.8 19 58-76 6-24 (156)
378 1q2z_A ATP-dependent DNA helic 23.8 1.3E+02 0.0044 18.3 4.8 33 102-134 42-75 (120)
379 2yru_A Steroid receptor RNA ac 23.6 1.3E+02 0.0045 18.3 7.8 62 53-115 21-89 (118)
380 1jog_A Hypothetical protein HI 23.2 95 0.0033 19.6 3.5 59 67-127 54-115 (146)
381 1z5h_A Tricorn protease intera 23.2 3.2E+02 0.011 22.6 8.0 46 86-133 648-693 (780)
382 2qq8_A TBC1 domain family memb 23.2 86 0.0029 22.8 3.7 45 109-153 215-259 (334)
383 3lxu_X Tripeptidyl-peptidase 2 23.1 4.1E+02 0.014 23.9 8.3 80 53-135 1236-1330(1354)
384 3m6y_A 4-hydroxy-2-oxoglutarat 23.1 57 0.0019 23.0 2.5 84 67-150 170-269 (275)
385 2ijq_A Hypothetical protein; s 22.7 1.6E+02 0.0056 19.0 8.0 49 101-149 46-102 (161)
386 3hfh_A Transcription elongatio 22.6 64 0.0022 21.4 2.7 27 68-95 5-31 (190)
387 2dhy_A CUE domain-containing p 22.5 1E+02 0.0035 16.7 5.5 43 103-150 18-60 (67)
388 1qsa_A Protein (soluble lytic 22.5 3E+02 0.01 22.1 10.0 95 52-150 253-347 (618)
389 3qye_A TBC1 domain family memb 21.7 95 0.0032 22.4 3.7 47 108-154 209-255 (331)
390 2r9g_A AAA ATPase, central reg 21.7 1.9E+02 0.0066 19.6 10.2 61 56-118 16-84 (204)
391 3r88_A Anthranilate phosphorib 21.6 2.5E+02 0.0087 20.9 6.0 66 85-152 21-89 (377)
392 2e2a_A Protein (enzyme IIA); h 21.4 1.4E+02 0.0048 17.8 4.3 15 133-147 31-45 (105)
393 3lpz_A GET4 (YOR164C homolog); 21.2 2.5E+02 0.0086 20.6 14.6 18 11-28 40-57 (336)
394 1rtw_A Transcriptional activat 20.9 2E+02 0.0067 19.3 6.0 81 85-171 100-194 (220)
395 3se6_A Endoplasmic reticulum a 20.7 4E+02 0.014 22.8 13.1 142 11-169 753-902 (967)
396 2qq8_A TBC1 domain family memb 20.7 83 0.0028 22.9 3.2 44 73-117 215-258 (334)
397 3m0z_A Putative aldolase; MCSG 20.5 54 0.0018 22.8 2.0 84 67-150 147-246 (249)
398 3dd4_A KV channel-interacting 20.3 2E+02 0.0068 19.1 12.3 84 49-132 82-167 (229)
399 1wcr_A PTS system, N, N'-diace 20.2 97 0.0033 18.4 2.9 19 132-150 28-46 (103)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=7.3e-36 Score=233.25 Aligned_cols=156 Identities=15% Similarity=0.170 Sum_probs=148.8
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC---------hHHHHHHHHHHh
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM---------FDEMQQILHQLK 78 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~---------~~~a~~~~~~m~ 78 (176)
.++.+|++|++.|++++|+++|++| .+ .|++||..+||+||.+|++.+. +++|.++|++|.
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M-~~---------~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~ 97 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEA-RR---------NGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMI 97 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHH-HH---------HTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHH-HH---------cCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHH
Confidence 4788999999999999999999999 55 4889999999999999997654 688999999999
Q ss_pred hcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccch
Q 036589 79 HDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDG 158 (176)
Q Consensus 79 ~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~ 158 (176)
+. |+.||..|||+||.+|++.|++++|.++|++|.+.|+.||..+||+||.+|++.|++++|.++|++|.+.|+. ||.
T Consensus 98 ~~-G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~-Pd~ 175 (501)
T 4g26_A 98 VD-KVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVV-PEE 175 (501)
T ss_dssp HT-TCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC-CCH
T ss_pred Hh-CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CCH
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHhhccccCC
Q 036589 159 LCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 159 ~t~~~li~~~~~~g~~~ 175 (176)
.||++||.+|++.|+++
T Consensus 176 ~ty~~Li~~~~~~g~~d 192 (501)
T 4g26_A 176 PELAALLKVSMDTKNAD 192 (501)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhhCCCHH
Confidence 99999999999999875
No 2
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=7.7e-35 Score=227.48 Aligned_cols=158 Identities=12% Similarity=0.000 Sum_probs=151.0
Q ss_pred CCCCCCHHHHHHHHHhccC---------hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHH
Q 036589 3 KAKPTSPFRLASLLHLQKH---------PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQI 73 (176)
Q Consensus 3 ~p~~~~~~~l~~~~~~~~~---------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~ 73 (176)
+||.+|||.||.+|++.+. +++|.++|++| .. .++.||..+|++||.+|++.|++++|.++
T Consensus 58 ~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M-~~---------~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l 127 (501)
T 4g26_A 58 QLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQM-IV---------DKVVPNEATFTNGARLAVAKDDPEMAFDM 127 (501)
T ss_dssp CCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHH-HH---------TTCCCCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHH-HH---------hCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Confidence 6999999999999998765 67899999999 55 47899999999999999999999999999
Q ss_pred HHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 74 LHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 74 ~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
|++|.+. |+.||..|||+||.+|++.|++++|.++|++|.+.|+.||..+|++||.+|++.|++++|.++|++|.+.+.
T Consensus 128 ~~~M~~~-g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~ 206 (501)
T 4g26_A 128 VKQMKAF-GIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVR 206 (501)
T ss_dssp HHHHHHT-TCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHc-CCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHhhccc
Q 036589 154 AVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 154 ~~p~~~t~~~li~~~~~~g 172 (176)
. |+..||++++..|++.+
T Consensus 207 ~-ps~~T~~~l~~~F~s~~ 224 (501)
T 4g26_A 207 Q-VSKSTFDMIEEWFKSEV 224 (501)
T ss_dssp S-BCHHHHHHHHHHHHSHH
T ss_pred C-cCHHHHHHHHHHHhcCc
Confidence 9 99999999999998753
No 3
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.93 E-value=2.7e-26 Score=187.16 Aligned_cols=124 Identities=8% Similarity=0.034 Sum_probs=113.1
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc--CCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHH
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD--TRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL 125 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~--~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~ 125 (176)
.--..+||++|++||+.|++++|.++|++|.+. .|+.||.+|||+||.+||+.|++++|.++|++|.+.|+.||.+||
T Consensus 124 ~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 124 SGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 345668999999999999999999999887642 289999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcH-HHHHHHHHHHHhccccccchHHHHHHHHHhhccc
Q 036589 126 NTLLNALLTCGKL-DRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 126 ~~ll~~~~~~g~~-~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g 172 (176)
|+||+++|+.|+. ++|.++|++|.+.|+. ||..||+.++.++.+.+
T Consensus 204 ntLI~glcK~G~~~e~A~~Ll~EM~~kG~~-PD~vtY~~ll~~~eR~~ 250 (1134)
T 3spa_A 204 AAALQCMGRQDQDAGTIERCLEQMSQEGLK-LQALFTAVLLSEEDRAT 250 (1134)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHTCC-SHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCCC-CChhhcccccChhhHHH
Confidence 9999999999984 7899999999999999 99999998777666543
No 4
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.92 E-value=4.4e-27 Score=191.79 Aligned_cols=157 Identities=15% Similarity=0.133 Sum_probs=127.3
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
.|||+||++|++.|++++|.++|++| .+.. ..++.||+.+||+||++||+.|++++|.++|++|.+. |+.||
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM-~~m~------~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~-G~~PD 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVH-HGQR------QKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDA-GLTPD 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHH-HHSH------HHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-TCCCC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHH-HHHh------hcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc-CCCCc
Confidence 37999999999999999999999887 3210 1478999999999999999999999999999999999 99999
Q ss_pred hHHHHHHHHHHHhccC-HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc-cccccchHHHHHH
Q 036589 87 EIIFCNVISFYGRARL-LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK-AIAVLDGLCSNLK 164 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~-~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~-~~~~p~~~t~~~l 164 (176)
.+|||+||.++|+.|+ .++|.++|++|.+.|+.||..+|++++.+..+.+-++.+.++..++.-. ..+ |...|...|
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~~vL~~Vrkv~P~f~p~~~~~-~~~~t~~LL 278 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKAVHKVKPTFSLPPQLP-PPVNTSKLL 278 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHHHHHHHHGGGCCCCCCCCCCC-CCCCCCTTT
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHHHHHHHHHHhCcccCCCCCCc-ccccchHHH
Confidence 9999999999999998 5789999999999999999999999998877764444443332222111 111 225566666
Q ss_pred HHHhhccc
Q 036589 165 IIMNDSQV 172 (176)
Q Consensus 165 i~~~~~~g 172 (176)
.+.|.+.+
T Consensus 279 ~dl~s~d~ 286 (1134)
T 3spa_A 279 RDVYAKDG 286 (1134)
T ss_dssp HHHHCCCS
T ss_pred HHHHccCC
Confidence 66666554
No 5
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.71 E-value=8.7e-17 Score=126.99 Aligned_cols=156 Identities=7% Similarity=-0.154 Sum_probs=114.7
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
++.+|+.+...|.+.|++++|.++|+++ ... .+.+..+|+.++.+|.+.|++++|.++|+++.+. ..
T Consensus 372 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~~ 438 (597)
T 2xpi_A 372 KAVTWLAVGIYYLCVNKISEARRYFSKS-STM----------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARL--FQ 438 (597)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TT
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHH-HHh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--Cc
Confidence 3456677777777777777777777776 221 1225677888888888888888888888887765 23
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc----cccccc--h
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK----AIAVLD--G 158 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~----~~~~p~--~ 158 (176)
.+..+|+.++.+|.+.|++++|+++|+++.+.. +.+..+|+.+...|.+.|++++|.++|+++.+. +.. |+ .
T Consensus 439 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~-p~~~~ 516 (597)
T 2xpi_A 439 GTHLPYLFLGMQHMQLGNILLANEYLQSSYALF-QYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSN-EKPWA 516 (597)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC-SGGGH
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccc-hhhHH
Confidence 466777888888888888888888888877543 346777888888888888888888888888765 555 66 6
Q ss_pred HHHHHHHHHhhccccCC
Q 036589 159 LCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 159 ~t~~~li~~~~~~g~~~ 175 (176)
.+|..+..+|.+.|+++
T Consensus 517 ~~~~~l~~~~~~~g~~~ 533 (597)
T 2xpi_A 517 ATWANLGHAYRKLKMYD 533 (597)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhcCHH
Confidence 78888888888888764
No 6
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.71 E-value=7.9e-17 Score=127.23 Aligned_cols=156 Identities=8% Similarity=-0.034 Sum_probs=138.4
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
+..+|+.+...|.+.|++++|+++|+++ ... .+.+..+|+.++.+|.+.|++++|.++|+++.+. . .
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-~-~ 472 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTA-ARL----------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYAL-F-Q 472 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHT----------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-C-C
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh----------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-C
Confidence 4568999999999999999999999998 331 2347889999999999999999999999999976 2 3
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCcc--HhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccch
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQRT--VKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDG 158 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p~--~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~ 158 (176)
.+..+|+.+..+|.+.|++++|+++|+++.+. +..|+ ..+|+.+..+|.+.|++++|.++|+++.+.+. .+.
T Consensus 473 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p--~~~ 550 (597)
T 2xpi_A 473 YDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLST--NDA 550 (597)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS--CCH
T ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--CCh
Confidence 47789999999999999999999999999865 66787 78999999999999999999999999988764 489
Q ss_pred HHHHHHHHHhhccccCC
Q 036589 159 LCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 159 ~t~~~li~~~~~~g~~~ 175 (176)
.+|..+..+|.+.|+++
T Consensus 551 ~~~~~l~~~~~~~g~~~ 567 (597)
T 2xpi_A 551 NVHTAIALVYLHKKIPG 567 (597)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCHH
Confidence 99999999999999875
No 7
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.43 E-value=3e-11 Score=80.86 Aligned_cols=152 Identities=11% Similarity=-0.039 Sum_probs=128.8
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+...+...|++++|.+.|+++. .. .+.+...|..+...+...|++++|...+++..+. ...+.
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--~~~~~ 76 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVY-DA----------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLAD--APDNV 76 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTC-CT----------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH-Hh----------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCCH
Confidence 46667888999999999999999983 32 2346888999999999999999999999999876 23456
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHH
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIM 167 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~ 167 (176)
..+..+...+...|++++|.+.|++..+.. +.+...+..+...+...|++++|.+.|++..+.... +...+..+...
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la~~ 153 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEAN-PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN--EGKVHRAIAFS 153 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCcc--chHHHHHHHHH
Confidence 788889999999999999999999988543 446788889999999999999999999999887543 67889999999
Q ss_pred hhccccCC
Q 036589 168 NDSQVRVT 175 (176)
Q Consensus 168 ~~~~g~~~ 175 (176)
|...|+++
T Consensus 154 ~~~~~~~~ 161 (186)
T 3as5_A 154 YEQMGRHE 161 (186)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 99888764
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.42 E-value=8e-12 Score=93.86 Aligned_cols=119 Identities=10% Similarity=0.004 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
..+|..+..++.+.|++++|...|+++.+. . +.+..+|..+..+|.+.|++++|++.|+++.+.. +.+..+++.+..
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~ 313 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIEL-Q-PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC-PTHADSLNNLAN 313 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-C-SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-C-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHH
Confidence 444444555555555555555555554443 1 1122344444555555555555555555444321 234444445555
Q ss_pred HHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
.+.+.|++++|.++|+++.+... .+..++..+...|.+.|++
T Consensus 314 ~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~g~~ 355 (388)
T 1w3b_A 314 IKREQGNIEEAVRLYRKALEVFP--EFAAAHSNLASVLQQQGKL 355 (388)
T ss_dssp HHHTTTCHHHHHHHHHHHTTSCT--TCHHHHHHHHHHHHTTTCC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHcCCH
Confidence 55555555555555555444322 2344444555555544443
No 9
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=9.9e-12 Score=93.37 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=96.2
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
.+|+.+...+.+.|++++|...|+++. .. .+.+...|..+...+...|++++|...|++..+. . +-+
T Consensus 170 ~~~~~l~~~~~~~g~~~~A~~~~~~al-~~----------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~-p~~ 236 (388)
T 1w3b_A 170 VAWSNLGCVFNAQGEIWLAIHHFEKAV-TL----------DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSL-S-PNH 236 (388)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-hc----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-C-cCC
Confidence 456666667777777777777777662 21 1124556666667777777777777777666654 1 123
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHH
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKII 166 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~ 166 (176)
..++..+..+|.+.|++++|++.|+++.+.. +.+..+|+.+...+.+.|++++|.++|+++.+... .+..+|..+..
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~l~~ 313 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQ-PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP--THADSLNNLAN 313 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc--ccHHHHHHHHH
Confidence 5566666777777777777777777666543 22455666677777777777777777777666543 35666677777
Q ss_pred HhhccccCC
Q 036589 167 MNDSQVRVT 175 (176)
Q Consensus 167 ~~~~~g~~~ 175 (176)
.+.+.|+++
T Consensus 314 ~~~~~g~~~ 322 (388)
T 1w3b_A 314 IKREQGNIE 322 (388)
T ss_dssp HHHTTTCHH
T ss_pred HHHHcCCHH
Confidence 776666643
No 10
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.39 E-value=1.6e-11 Score=89.60 Aligned_cols=146 Identities=14% Similarity=0.140 Sum_probs=112.8
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+-..+.+.|++++|++.|++ . .+...+..+...+.+.|++++|.+.|+++.+. . |+.
T Consensus 103 ~~~~la~~~~~~g~~~~Al~~l~~--~--------------~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~-~--p~~ 163 (291)
T 3mkr_A 103 FLLMAASIYFYDQNPDAALRTLHQ--G--------------DSLECMAMTVQILLKLDRLDLARKELKKMQDQ-D--EDA 163 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTT--C--------------CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C--TTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHhC--C--------------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh-C--cCc
Confidence 344555778888888888888877 1 16778888999999999999999999999876 3 443
Q ss_pred HHH---HHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHH
Q 036589 88 IIF---CNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLK 164 (176)
Q Consensus 88 ~~~---~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~l 164 (176)
... ..++..+...|++++|+.+|+++.+. .+.+...++.+..++.+.|++++|.+.|++..+.... +..++..+
T Consensus 164 ~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~-~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~--~~~~l~~l 240 (291)
T 3mkr_A 164 TLTQLATAWVSLAAGGEKLQDAYYIFQEMADK-CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG--HPETLINL 240 (291)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHH
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHH
Confidence 221 22334444558899999999998865 3567888999999999999999999999998877664 77788888
Q ss_pred HHHhhccccCC
Q 036589 165 IIMNDSQVRVT 175 (176)
Q Consensus 165 i~~~~~~g~~~ 175 (176)
+..+...|+.+
T Consensus 241 ~~~~~~~g~~~ 251 (291)
T 3mkr_A 241 VVLSQHLGKPP 251 (291)
T ss_dssp HHHHHHTTCCH
T ss_pred HHHHHHcCCCH
Confidence 88888888753
No 11
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.39 E-value=4.5e-12 Score=96.71 Aligned_cols=153 Identities=11% Similarity=-0.021 Sum_probs=105.4
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+.+.|++++|+.+|+.+ ... .+.+...|..+..++...|++++|...|+++.+. + +.+
T Consensus 27 ~~~~~~~~~~~~~g~~~~A~~~~~~~-l~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~-p~~ 93 (450)
T 2y4t_A 27 EKHLELGKKLLAAGQLADALSQFHAA-VDG----------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQL-K-MDF 93 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHH-HHh----------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-C-CCc
Confidence 45667777888888888888888876 221 1236777888888888888888888888888766 2 234
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccH---hHHHHHH------------HHHHhcCcHHHHHHHHHHHHhc
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTV---KSLNTLL------------NALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~---~~~~~ll------------~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
...+..+..+|.+.|++++|.+.|+++.+.. +.+. ..+..+. ..+...|++++|.++|+++.+.
T Consensus 94 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 172 (450)
T 2y4t_A 94 TAARLQRGHLLLKQGKLDEAEDDFKKVLKSN-PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEV 172 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 5677778888888888888888888877543 1222 4444443 3367777777777777777665
Q ss_pred cccccchHHHHHHHHHhhccccCC
Q 036589 152 AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 152 ~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
... +...+..+...|.+.|+++
T Consensus 173 ~~~--~~~~~~~l~~~~~~~g~~~ 194 (450)
T 2y4t_A 173 CVW--DAELRELRAECFIKEGEPR 194 (450)
T ss_dssp CTT--CHHHHHHHHHHHHHTTCGG
T ss_pred CCC--ChHHHHHHHHHHHHCCCHH
Confidence 443 5666777777777777654
No 12
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.37 E-value=8.6e-12 Score=87.09 Aligned_cols=155 Identities=12% Similarity=-0.024 Sum_probs=125.5
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhc-----------CChHHHHHH
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA-----------KMFDEMQQI 73 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~-----------g~~~~a~~~ 73 (176)
++..+..+-..+.+.|++++|+..|++. ... .+.+...|..+..++.+. |++++|...
T Consensus 38 ~~~a~~~lg~~~~~~g~~~~A~~~~~~a-l~~----------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~ 106 (217)
T 2pl2_A 38 DPEALYWLARTQLKLGLVNPALENGKTL-VAR----------TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSV 106 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh----------CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHH
Confidence 3445677778888888999998888886 221 123677888899999999 999999999
Q ss_pred HHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 74 LHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 74 ~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
|++..+. . +-+...+..+-.+|...|++++|+..|++..+.. .+...+..+-..|...|++++|.+.|++..+..+
T Consensus 107 ~~~al~~-~-P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P 182 (217)
T 2pl2_A 107 LKDAERV-N-PRYAPLHLQRGLVYALLGERDKAEASLKQALALE--DTPEIRSALAELYLSMGRLDEALAQYAKALEQAP 182 (217)
T ss_dssp HHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHh-C-cccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999976 2 2346778889999999999999999999998776 7888999999999999999999999999988766
Q ss_pred cccchHHHHHHHHHhhccccCCC
Q 036589 154 AVLDGLCSNLKIIMNDSQVRVTG 176 (176)
Q Consensus 154 ~~p~~~t~~~li~~~~~~g~~~~ 176 (176)
. +...+..+...+.+.|++++
T Consensus 183 ~--~~~~~~~la~~~~~~g~~~~ 203 (217)
T 2pl2_A 183 K--DLDLRVRYASALLLKGKAEE 203 (217)
T ss_dssp T--CHHHHHHHHHHHTC------
T ss_pred C--ChHHHHHHHHHHHHccCHHH
Confidence 4 77889999999999998763
No 13
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.37 E-value=2.7e-11 Score=83.69 Aligned_cols=155 Identities=10% Similarity=-0.121 Sum_probs=119.1
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
+..+..+...+.+.|++++|.+.|+... .. .+.+...|..+...+...|++++|...+++..+. . ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~-~~ 74 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDAL-KS----------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSI-K-PD 74 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHH-Hh----------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh-C-CC
Confidence 3456777888888999999999998872 21 1235778888888889999999999999888876 2 33
Q ss_pred chHHHHHHHHHHHhc-cCHHHHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHH
Q 036589 86 EEIIFCNVISFYGRA-RLLEHALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNL 163 (176)
Q Consensus 86 ~~~~~~~li~~~~~~-g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~ 163 (176)
+...+..+...|... |++++|+..|+++.+.+..| +...+..+...+...|++++|.+.|+++.+.... +...+..
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~ 152 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ--FPPAFKE 152 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CchHHHH
Confidence 566778888888899 99999999998887632223 3567788888888899999999999888776543 5777888
Q ss_pred HHHHhhccccCC
Q 036589 164 KIIMNDSQVRVT 175 (176)
Q Consensus 164 li~~~~~~g~~~ 175 (176)
+...|.+.|+++
T Consensus 153 la~~~~~~~~~~ 164 (225)
T 2vq2_A 153 LARTKMLAGQLG 164 (225)
T ss_dssp HHHHHHHHTCHH
T ss_pred HHHHHHHcCCHH
Confidence 888888877754
No 14
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.36 E-value=2.2e-11 Score=85.97 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC-chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP-EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
...|..+...+...|++++|.+.++++.+. +..| +...+..+...|.+.|++++|++.|++..+.. +.+...+..+.
T Consensus 105 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~la 182 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQKRYEEAYQRLLEASQD-TLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN-RNQPSVALEMA 182 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTC-TTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhC-ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cccHHHHHHHH
Confidence 444444445555555555555555554441 2222 33344444455555555555555555444322 12344444455
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcccc
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
..+...|++++|.++|++..+.... +...+..+...|...|+
T Consensus 183 ~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 224 (252)
T 2ho1_A 183 DLLYKEREYVPARQYYDLFAQGGGQ--NARSLLLGIRLAKVFED 224 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSCC--CHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcC--cHHHHHHHHHHHHHccC
Confidence 5555555555555555554443222 33444444444444443
No 15
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.36 E-value=3.8e-11 Score=84.76 Aligned_cols=154 Identities=9% Similarity=-0.090 Sum_probs=129.2
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+...|++++|.+.|+++ ... .+.+...|..+...+...|++++|.+.+++..+. . ..+
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~a-l~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~-~~~ 104 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKA-LEI----------DPSSADAHAALAVVFQTEMEPKLADEEYRKALAS-D-SRN 104 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHH-Hhc----------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-C-cCc
Confidence 45677788899999999999999997 221 1236788999999999999999999999999876 2 336
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
...+..+...|...|++++|++.|+++.+.+..| +...+..+...+...|++++|.+.|++..+.... +...+..+.
T Consensus 105 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~la 182 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN--QPSVALEMA 182 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc--cHHHHHHHH
Confidence 7788889999999999999999999998733344 5677888899999999999999999999886553 678899999
Q ss_pred HHhhccccCC
Q 036589 166 IMNDSQVRVT 175 (176)
Q Consensus 166 ~~~~~~g~~~ 175 (176)
..|...|+++
T Consensus 183 ~~~~~~g~~~ 192 (252)
T 2ho1_A 183 DLLYKEREYV 192 (252)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHcCCHH
Confidence 9999888764
No 16
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.35 E-value=2.6e-11 Score=84.93 Aligned_cols=154 Identities=11% Similarity=0.039 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
+..+..+...+.+.|++++|++.|++. ... .+.+...|..+...+...|++++|.+.+++..+. . ..
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~-~~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~-~~ 123 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKA-LEL----------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA-G-ME 123 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-T-CC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH-HHc----------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh-C-CC
Confidence 345556666777777777777777765 221 1225666777777777777777777777777665 2 23
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+...+..+...|.+.|++++|+..|++..+.. +.+...+..+...+.+.|++++|.+.|++..+.... +..+|..+.
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la 200 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPG--HADAFYNAG 200 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTT--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc--cHHHHHHHH
Confidence 45566667777777777777777777766432 235666777777777777777777777777665443 566777777
Q ss_pred HHhhccccCC
Q 036589 166 IMNDSQVRVT 175 (176)
Q Consensus 166 ~~~~~~g~~~ 175 (176)
..|...|+++
T Consensus 201 ~~~~~~~~~~ 210 (243)
T 2q7f_A 201 VTYAYKENRE 210 (243)
T ss_dssp HHHHHTTCTT
T ss_pred HHHHHccCHH
Confidence 7777777654
No 17
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.34 E-value=2.8e-11 Score=84.45 Aligned_cols=156 Identities=13% Similarity=-0.005 Sum_probs=131.1
Q ss_pred CCCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC
Q 036589 3 KAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR 82 (176)
Q Consensus 3 ~p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g 82 (176)
++++..+..+-..+.+.|++++|+..|++.. .. .+.+...|..+..++.+.|++++|...|++..+. .
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al-~~----------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~-~ 69 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERAL-KE----------NPQDPEALYWLARTQLKLGLVNPALENGKTLVAR-T 69 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHH-TT----------SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C
Confidence 4566678888899999999999999999972 21 2347888999999999999999999999999976 2
Q ss_pred CCCchHHHHHHHHHHHhc-----------cCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 83 VIPEEIIFCNVISFYGRA-----------RLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~-----------g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
+-+...+..+..+|.+. |++++|+..|++..+.. +-+...+..+-..+...|++++|++.|++..+.
T Consensus 70 -P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 147 (217)
T 2pl2_A 70 -PRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVN-PRYAPLHLQRGLVYALLGERDKAEASLKQALAL 147 (217)
T ss_dssp -TTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 23556788899999999 99999999999988653 235778888899999999999999999999887
Q ss_pred cccccchHHHHHHHHHhhccccCC
Q 036589 152 AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 152 ~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
. . +...+..+-..|...|+++
T Consensus 148 ~-~--~~~~~~~la~~~~~~g~~~ 168 (217)
T 2pl2_A 148 E-D--TPEIRSALAELYLSMGRLD 168 (217)
T ss_dssp C-C--CHHHHHHHHHHHHHHTCHH
T ss_pred c-c--chHHHHHHHHHHHHcCCHH
Confidence 7 5 7788889999999988865
No 18
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.33 E-value=1.4e-11 Score=94.00 Aligned_cols=155 Identities=8% Similarity=-0.102 Sum_probs=127.2
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
.++..|..+...+.+.|++++|++.|+++ ... .+.+...|..+..+|.+.|++++|.+.|+++.+.
T Consensus 58 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a-l~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--- 123 (450)
T 2y4t_A 58 DNYIAYYRRATVFLAMGKSKAALPDLTKV-IQL----------KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS--- 123 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS---
T ss_pred ccHHHHHHHHHHHHHCCCHHHHHHHHHHH-Hhc----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---
Confidence 34567888899999999999999999998 321 1236788999999999999999999999999876
Q ss_pred CCc-h---HHHHHH------------HHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHH
Q 036589 84 IPE-E---IIFCNV------------ISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFIS 147 (176)
Q Consensus 84 ~~~-~---~~~~~l------------i~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~ 147 (176)
.|+ . ..+..+ ...+.+.|++++|+..|+++.+.. +.+...+..+...|.+.|++++|.++|++
T Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 202 (450)
T 2y4t_A 124 NPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKA 202 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHH
T ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 233 3 455555 445899999999999999988643 34778899999999999999999999999
Q ss_pred HHhccccccchHHHHHHHHHhhccccCC
Q 036589 148 FNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 148 m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+.+.... +..+|..+...|...|+++
T Consensus 203 ~~~~~~~--~~~~~~~l~~~~~~~g~~~ 228 (450)
T 2y4t_A 203 ASKLKND--NTEAFYKISTLYYQLGDHE 228 (450)
T ss_dssp HHHHHCS--CHHHHHHHHHHHHHTTCHH
T ss_pred HHHhCCC--CHHHHHHHHHHHHHcCCHH
Confidence 9876543 7889999999999988764
No 19
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.33 E-value=2.3e-11 Score=85.17 Aligned_cols=156 Identities=6% Similarity=-0.071 Sum_probs=114.4
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
..+..|..+...+.+.|++++|...|++. ... .+.+...+..+...+.+.|++++|...+++..+. .
T Consensus 21 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~-l~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~- 87 (243)
T 2q7f_A 21 MASMTGGQQMGRGSEFGDYEKAAEAFTKA-IEE----------NKEDAIPYINFANLLSSVNELERALAFYDKALEL-D- 87 (243)
T ss_dssp ---------------------CCTTHHHH-HTT----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHh----------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-C-
Confidence 45567788888999999999999999998 222 2336888999999999999999999999999876 2
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHH
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNL 163 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~ 163 (176)
..+...+..+...|...|++++|.+.|++..+.. +.+...+..+...+.+.|++++|.+++++..+.... +...+..
T Consensus 88 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~ 164 (243)
T 2q7f_A 88 SSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG-MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN--DTEARFQ 164 (243)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT--CHHHHHH
T ss_pred CcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc--cHHHHHH
Confidence 3467788889999999999999999999988654 346778899999999999999999999999876553 6788899
Q ss_pred HHHHhhccccCC
Q 036589 164 KIIMNDSQVRVT 175 (176)
Q Consensus 164 li~~~~~~g~~~ 175 (176)
+...|.+.|+++
T Consensus 165 l~~~~~~~~~~~ 176 (243)
T 2q7f_A 165 FGMCLANEGMLD 176 (243)
T ss_dssp HHHHHHHHTCCH
T ss_pred HHHHHHHcCCHH
Confidence 999999888764
No 20
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.32 E-value=4.6e-11 Score=82.53 Aligned_cols=155 Identities=11% Similarity=-0.034 Sum_probs=125.6
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA-KMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~-g~~~~a~~~~~~m~~~~g~~ 84 (176)
+..+..+...+...|++++|.+.|++. ... .+.+...|..+...+... |++++|...++++.+. +..
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a-~~~----------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~-~~~ 109 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQA-LSI----------KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALAD-PTY 109 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTS-TTC
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHH-HHh----------CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcC-cCC
Confidence 446778888999999999999999987 221 123677899999999999 9999999999999983 333
Q ss_pred C-chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHH
Q 036589 85 P-EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNL 163 (176)
Q Consensus 85 ~-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~ 163 (176)
| +...+..+..++.+.|++++|+..|+++.+.. +.+...+..+...+.+.|++++|.++|++..+.... .+...+..
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~ 187 (225)
T 2vq2_A 110 PTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEV-LQADDLLL 187 (225)
T ss_dssp SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS-CCHHHHHH
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CCHHHHHH
Confidence 3 46778889999999999999999999988643 335788899999999999999999999999876552 35666777
Q ss_pred HHHHhhccccC
Q 036589 164 KIIMNDSQVRV 174 (176)
Q Consensus 164 li~~~~~~g~~ 174 (176)
+...+...|+.
T Consensus 188 ~~~~~~~~~~~ 198 (225)
T 2vq2_A 188 GWKIAKALGNA 198 (225)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHhcCcH
Confidence 77777776654
No 21
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.31 E-value=4e-11 Score=81.01 Aligned_cols=154 Identities=8% Similarity=-0.113 Sum_probs=126.1
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
+..|..+-..|.+.|++++|++.|++.... .+-+...|..+..++.+.|++++|...++..... ..-
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~--~~~ 71 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA-----------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVL--DTT 71 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--Cch
Confidence 446788889999999999999999997222 1236788999999999999999999999998876 233
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+...+..+...+...++++.|...+++..+.. +-+...+..+-..|.+.|++++|++.|++..+.... +..+|..+-
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~lg 148 (184)
T 3vtx_A 72 SAEAYYILGSANFMIDEKQAAIDALQRAIALN-TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG--FIRAYQSIG 148 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch--hhhHHHHHH
Confidence 45666777888889999999999999877543 346777888889999999999999999998887654 778888999
Q ss_pred HHhhccccCC
Q 036589 166 IMNDSQVRVT 175 (176)
Q Consensus 166 ~~~~~~g~~~ 175 (176)
.+|.+.|+++
T Consensus 149 ~~~~~~g~~~ 158 (184)
T 3vtx_A 149 LAYEGKGLRD 158 (184)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHCCCHH
Confidence 9999888764
No 22
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.30 E-value=9.7e-11 Score=74.17 Aligned_cols=131 Identities=11% Similarity=0.074 Sum_probs=109.8
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.|..+...+.+.|++++|..+|+++ ... .+.+...|..+...+...|++++|...++++... . ..+.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~-~~~----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~-~~~~ 69 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKA-LEL----------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-D-PRSA 69 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-C-TTCH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHH-HHc----------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH-C-CCch
Confidence 4677888999999999999999997 221 1236778888999999999999999999999876 2 3456
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKA 152 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~ 152 (176)
..+..+...+...|++++|.+.|+++.+.. +.+...+..+...+.+.|++++|.+.|+++.+..
T Consensus 70 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHHHHccC
Confidence 678889999999999999999999988643 3467788899999999999999999999987643
No 23
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.29 E-value=9.8e-12 Score=92.58 Aligned_cols=167 Identities=10% Similarity=-0.043 Sum_probs=119.3
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
++..|..+...|.+.|++++|+..|+++. ...................+..+...+.+.|++++|...|+++.+...-.
T Consensus 132 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al-~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 210 (365)
T 4eqf_A 132 NLKALMALAVSYTNTSHQQDACEALKNWI-KQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDM 210 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHHHHHccccHHHHHHHHHHHH-HhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCc
Confidence 34567888888999999999999998872 21000000000000112344556788899999999999999999873333
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHH
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLK 164 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~l 164 (176)
++..++..+...|.+.|++++|+..|++..+.. +.+..+|+.+...|.+.|++++|.+.|++..+.... +..+|..+
T Consensus 211 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l 287 (365)
T 4eqf_A 211 IDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR-PEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPG--FIRSRYNL 287 (365)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHH
Confidence 367889999999999999999999999988653 346788999999999999999999999999887553 68899999
Q ss_pred HHHhhccccCC
Q 036589 165 IIMNDSQVRVT 175 (176)
Q Consensus 165 i~~~~~~g~~~ 175 (176)
...|.+.|+++
T Consensus 288 ~~~~~~~g~~~ 298 (365)
T 4eqf_A 288 GISCINLGAYR 298 (365)
T ss_dssp HHHHHHHTCCH
T ss_pred HHHHHHCCCHH
Confidence 99999998875
No 24
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.27 E-value=9.8e-11 Score=87.14 Aligned_cols=155 Identities=8% Similarity=-0.092 Sum_probs=117.5
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
...+..+...+.+.|++++|+++|+.+. .. .+.+...|..+..++.+.|++++|...|++..+. . +.
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al-~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-p~ 131 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAI-LQ----------DPGDAEAWQFLGITQAENENEQAAIVALQRCLEL-Q-PN 131 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TT
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHH-Hh----------CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-C-CC
Confidence 4458888888899999999999998872 21 1336778888889999999999999999888876 2 33
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCC------------------------------------------CCc---
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFN------------------------------------------VQR--- 120 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~------------------------------------------~~p--- 120 (176)
+...+..+..+|...|++++|+..|+++.+.. ..|
T Consensus 132 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 211 (365)
T 4eqf_A 132 NLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMI 211 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSC
T ss_pred CHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCcc
Confidence 46778888888888888888888887765421 012
Q ss_pred cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 121 TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 121 ~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+...+..+...|...|++++|.+.|++..+.... +..+|..+...|...|+++
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~g~~~ 264 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE--DYSLWNRLGATLANGDRSE 264 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHH
Confidence 4667778888888888888888888888776543 6778888888888877754
No 25
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.25 E-value=4e-11 Score=87.48 Aligned_cols=150 Identities=12% Similarity=-0.032 Sum_probs=94.5
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
..++..+...+.+.++.++|++.|+++.... ..+-+...+..+...+...|++++|.+.+++ ..
T Consensus 65 ~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~---------~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-------~~ 128 (291)
T 3mkr_A 65 LQAVRMFAEYLASHSRRDAIVAELDREMSRS---------VDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-------GD 128 (291)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHHSC---------CCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-------CC
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHhcc---------cCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-------CC
Confidence 3345556666666677777777776651110 0122445555566667777777777776665 23
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHH---HHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL---NTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSN 162 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~---~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~ 162 (176)
+...+..+...|.+.|++++|.+.|+++.+.. |+.... ..++..+...|++++|..+|+++.+... .+...|+
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p--~~~~~~~ 204 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQD--EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCS--PTLLLLN 204 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSC--CCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCC--CcHHHHH
Confidence 45566777777777888888888888777543 443211 1233444455778888888888877633 4777788
Q ss_pred HHHHHhhccccCC
Q 036589 163 LKIIMNDSQVRVT 175 (176)
Q Consensus 163 ~li~~~~~~g~~~ 175 (176)
.+..++.+.|+++
T Consensus 205 ~la~~~~~~g~~~ 217 (291)
T 3mkr_A 205 GQAACHMAQGRWE 217 (291)
T ss_dssp HHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHH
Confidence 8888888888764
No 26
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.25 E-value=2.3e-10 Score=93.06 Aligned_cols=155 Identities=11% Similarity=-0.034 Sum_probs=132.9
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
+..++.|-..|.+.|++++|++.|++...- .+-+...|..+..+|.+.|++++|.+.|++..+.. .-
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l-----------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~--P~ 75 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEV-----------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS--PT 75 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC
Confidence 346888999999999999999999997221 12268899999999999999999999999998762 23
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+...|+.+-.+|.+.|++++|++.|++..+.. +-+...|+.+-..|...|++++|++.|++..+.... +...|..+.
T Consensus 76 ~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~-P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~--~~~a~~~L~ 152 (723)
T 4gyw_A 76 FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN-PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD--FPDAYCNLA 152 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--ChHHHhhhh
Confidence 46788999999999999999999999988654 336788999999999999999999999999887665 688999999
Q ss_pred HHhhccccCCC
Q 036589 166 IMNDSQVRVTG 176 (176)
Q Consensus 166 ~~~~~~g~~~~ 176 (176)
..|...|++++
T Consensus 153 ~~l~~~g~~~~ 163 (723)
T 4gyw_A 153 HCLQIVCDWTD 163 (723)
T ss_dssp HHHHHTTCCTT
T ss_pred hHHHhcccHHH
Confidence 99999999874
No 27
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1.1e-10 Score=82.20 Aligned_cols=161 Identities=9% Similarity=-0.092 Sum_probs=129.0
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc----HHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN----LLHYDLIITKLGRAKMFDEMQQILHQLKH 79 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~----~~~y~~li~~~~~~g~~~~a~~~~~~m~~ 79 (176)
+++..+..+...+...|++++|++.|+... ... +...++ ...|..+..++.+.|++++|...|++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~-~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 36 KDITYLNNRAAAEYEKGEYETAISTLNDAV-EQG-------REMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp CCTHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHH-------HHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcccHHHHHHHHHHHH-HhC-------cccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 345678888899999999999999999872 210 111112 67899999999999999999999999987
Q ss_pred cCC-----------------------CC-CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc
Q 036589 80 DTR-----------------------VI-PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC 135 (176)
Q Consensus 80 ~~g-----------------------~~-~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 135 (176)
... .. .+...+..+...+...|++++|+..|++..+.. +.+...|..+...|.+.
T Consensus 108 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~ 186 (258)
T 3uq3_A 108 EHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKL 186 (258)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred cCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHh
Confidence 310 12 234567788899999999999999999988644 34678899999999999
Q ss_pred CcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 136 GKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 136 g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
|++++|.+.|++..+.... +...|..+...|...|+++
T Consensus 187 ~~~~~A~~~~~~al~~~~~--~~~~~~~l~~~~~~~g~~~ 224 (258)
T 3uq3_A 187 MSFPEAIADCNKAIEKDPN--FVRAYIRKATAQIAVKEYA 224 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHhhHH
Confidence 9999999999999887553 6888999999999888764
No 28
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.23 E-value=1.9e-10 Score=85.37 Aligned_cols=122 Identities=7% Similarity=-0.072 Sum_probs=101.3
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...|..+...+.+.|++++|...|++..+. .+.+...+..+...|.+.|++++|+..|++..+.. +.+...+..+.
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~ 292 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV--RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ-PGYIRSRYNLG 292 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHH
Confidence 5788888999999999999999999998876 23356788889999999999999999999887543 34677889999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhcccccc----------chHHHHHHHHHhhccccCC
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVL----------DGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p----------~~~t~~~li~~~~~~g~~~ 175 (176)
..|.+.|++++|.+.|++..+.... . ...+|..+..+|...|+.+
T Consensus 293 ~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 347 (368)
T 1fch_A 293 ISCINLGAHREAVEHFLEALNMQRK-SRGPRGEGGAMSENIWSTLRLALSMLGQSD 347 (368)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHT-C------CCCCCHHHHHHHHHHHHHHTCGG
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCC-CCCccccccchhhHHHHHHHHHHHHhCChH
Confidence 9999999999999999998765433 1 1688999999999998876
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.23 E-value=8.1e-10 Score=81.95 Aligned_cols=154 Identities=10% Similarity=-0.009 Sum_probs=103.9
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
...+..+...+.+.|++++|+..|+++. .. .+.+...|..+..++.+.|++++|...|++..+. . +.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al-~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~-~~ 130 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAV-QQ----------DPKHMEAWQYLGTTQAENEQELLAISALRRCLEL-K-PD 130 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHH-HS----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TT
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhc-C-CC
Confidence 4567777888888888888888888872 21 1235677777888888888888888888887765 2 23
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCC-----------------------------------------------
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNV----------------------------------------------- 118 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~----------------------------------------------- 118 (176)
+..++..+..+|...|++++|+..|+++.+..-
T Consensus 131 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 210 (368)
T 1fch_A 131 NQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRL 210 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHh
Confidence 556677777777777777777777776553220
Q ss_pred Cc---cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 119 QR---TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 119 ~p---~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
.| +..++..+...|.+.|++++|.+.|++..+.... +..+|..+...|.+.|++
T Consensus 211 ~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~--~~~~~~~l~~~~~~~g~~ 267 (368)
T 1fch_A 211 DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN--DYLLWNKLGATLANGNQS 267 (368)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCH
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC--CHHHHHHHHHHHHHcCCH
Confidence 11 3556666667777777777777777776655432 456666666666666654
No 30
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.23 E-value=3.9e-10 Score=82.17 Aligned_cols=156 Identities=9% Similarity=-0.038 Sum_probs=105.0
Q ss_pred CCCCHHHHHHHHHhcc-ChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 5 KPTSPFRLASLLHLQK-HPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
++..|..+...+...| ++++|.+.|++. ... .+.+...|..+...+...|++++|...+++..+. .
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~a-~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~- 155 (330)
T 3hym_B 89 NPVSWFAVGCYYLMVGHKNEHARRYLSKA-TTL----------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQL-M- 155 (330)
T ss_dssp STHHHHHHHHHHHHSCSCHHHHHHHHHHH-HTT----------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-T-
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHh----------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-c-
Confidence 3445666667777777 777777777776 221 1224556777777777777777777777777765 2
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcc--------ccc
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKA--------IAV 155 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~--------~~~ 155 (176)
+.+...+..+...|...|++++|...|++..+.. +.+...+..+...+...|++++|.+.|++..+.. .+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~- 233 (330)
T 3hym_B 156 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIA-PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVD- 233 (330)
T ss_dssp TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTT-
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccccc-
Confidence 2234555557777778888888888888777543 3456777777788888888888888887776532 12
Q ss_pred cchHHHHHHHHHhhccccCC
Q 036589 156 LDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 156 p~~~t~~~li~~~~~~g~~~ 175 (176)
.+..+|..+...|...|+++
T Consensus 234 ~~~~~~~~la~~~~~~g~~~ 253 (330)
T 3hym_B 234 KWEPLLNNLGHVCRKLKKYA 253 (330)
T ss_dssp TCCHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHH
Confidence 34567777777777777653
No 31
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.23 E-value=7.2e-13 Score=101.13 Aligned_cols=139 Identities=10% Similarity=0.048 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
|.+.+|+.|..++.+.|++++|++.|.+. +|...|..++.++...|++++|.+.++..++.
T Consensus 30 ~~~~vWs~La~A~l~~g~~~eAIdsfika----------------~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~--- 90 (449)
T 1b89_A 30 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA----------------DDPSSYMEVVQAANTSGNWEELVKYLQMARKK--- 90 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHcC----------------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh---
Confidence 34457888888888888888888888554 15556777777777777777777766555543
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHh--------------------------HHHHHHHHHHhcCc
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVK--------------------------SLNTLLNALLTCGK 137 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~--------------------------~~~~ll~~~~~~g~ 137 (176)
.++..+.+.++.+|.+.|+++++.++++. |+.. .|..+..++.+.|+
T Consensus 91 ~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~-------pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a~n~~~LA~~L~~Lg~ 163 (449)
T 1b89_A 91 ARESYVETELIFALAKTNRLAELEEFING-------PNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGE 163 (449)
T ss_dssp ------------------CHHHHTTTTTC-------C----------------CTTTHHHHHHHTTCHHHHHHHHHTTTC
T ss_pred CccchhHHHHHHHHHHhCCHHHHHHHHcC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHhhhHHHHHHHHHHhcc
Confidence 23355566666666666666666555532 3333 45566666666666
Q ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 138 LDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 138 ~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+++|.+.++++ .++.+|..++.+|+..|+++
T Consensus 164 yq~AVea~~KA-------~~~~~Wk~v~~aCv~~~ef~ 194 (449)
T 1b89_A 164 YQAAVDGARKA-------NSTRTWKEVCFACVDGKEFR 194 (449)
T ss_dssp HHHHHHHHHHH-------TCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHc-------CCchhHHHHHHHHHHcCcHH
Confidence 66666666655 25678899999998888764
No 32
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.23 E-value=5.1e-12 Score=96.49 Aligned_cols=151 Identities=10% Similarity=0.015 Sum_probs=73.6
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCC--CCCC--------C------CCCCCCCcHHHHHHHHHHHHhcCCh
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNAN--DTEA--------P------PLKPFRYNLLHYDLIITKLGRAKMF 67 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~--------~------~~~~~~~~~~~y~~li~~~~~~g~~ 67 (176)
+++..|..++..+.+.|++++|+.+++...+... .... . ..---.|+..+|..+...|...|++
T Consensus 59 ~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~y 138 (449)
T 1b89_A 59 DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMY 138 (449)
T ss_dssp --------------------------------------------------CHHHHTTTTTCC----------------CT
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCH
Confidence 4555666666666666666666665555421100 0000 0 0000013555778888888888888
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHH
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFIS 147 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~ 147 (176)
++|...|..+ ..|..+..++.+.|++++|++.++++ .++.+|..++.+|...|+++.|......
T Consensus 139 eeA~~~Y~~a----------~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~~~ef~lA~~~~l~ 202 (449)
T 1b89_A 139 DAAKLLYNNV----------SNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKEVCFACVDGKEFRLAQMCGLH 202 (449)
T ss_dssp TTHHHHHHHT----------TCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHHTTCHHHHHHTTTT
T ss_pred HHHHHHHHHh----------hhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHHHHHHHHHcCcHHHHHHHHHH
Confidence 8888888766 36788999999999999999999988 2789999999999999999999777665
Q ss_pred HHhccccccchHHHHHHHHHhhccccCCC
Q 036589 148 FNLKAIAVLDGLCSNLKIIMNDSQVRVTG 176 (176)
Q Consensus 148 m~~~~~~~p~~~t~~~li~~~~~~g~~~~ 176 (176)
+. .. |+. ...++..|.+.|++++
T Consensus 203 L~---~~-ad~--l~~lv~~Yek~G~~eE 225 (449)
T 1b89_A 203 IV---VH-ADE--LEELINYYQDRGYFEE 225 (449)
T ss_dssp TT---TC-HHH--HHHHHHHHHHTTCHHH
T ss_pred HH---hC-Hhh--HHHHHHHHHHCCCHHH
Confidence 33 22 554 4469999999998763
No 33
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.22 E-value=3.1e-10 Score=82.69 Aligned_cols=154 Identities=5% Similarity=-0.122 Sum_probs=101.4
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcC-ChHHHHHHHHHHhhcCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAK-MFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~~~~~m~~~~g~~ 84 (176)
...+..+...+.+.|++++|..+|+++. .. .+.+...|..+...+...| ++++|...|++..+. . +
T Consensus 56 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~----------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~-~-~ 122 (330)
T 3hym_B 56 ASCLPVHIGTLVELNKANELFYLSHKLV-DL----------YPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTL-E-K 122 (330)
T ss_dssp TTTHHHHHHHHHHHTCHHHHHHHHHHHH-HH----------CTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT-C-T
T ss_pred hhhHHHHHHHHHHhhhHHHHHHHHHHHH-Hh----------CcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh-C-C
Confidence 3445556666666677777777666652 21 1224556667777777777 777777777777755 1 2
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHH
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLK 164 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~l 164 (176)
.+...|..+...+...|++++|++.|++..+.. +.+...+..+...|...|++++|.+.|++..+.... +...+..+
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~l 199 (330)
T 3hym_B 123 TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM-KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPE--DPFVMHEV 199 (330)
T ss_dssp TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT--CHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC--ChHHHHHH
Confidence 245566777777777777777777777776543 223455666777777788888888888777766543 56777777
Q ss_pred HHHhhccccCC
Q 036589 165 IIMNDSQVRVT 175 (176)
Q Consensus 165 i~~~~~~g~~~ 175 (176)
...|...|+++
T Consensus 200 ~~~~~~~~~~~ 210 (330)
T 3hym_B 200 GVVAFQNGEWK 210 (330)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHcccHH
Confidence 77777777653
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=2.7e-10 Score=80.19 Aligned_cols=154 Identities=6% Similarity=0.011 Sum_probs=126.7
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC-CCCc
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR-VIPE 86 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g-~~~~ 86 (176)
.+..+-..+.+.|++++|+..|+.. ... . .+...|..+..++...|++++|...+++..+... ..++
T Consensus 7 ~~~~~g~~~~~~~~~~~A~~~~~~a-~~~---------~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 74 (258)
T 3uq3_A 7 KEKAEGNKFYKARQFDEAIEHYNKA-WEL---------H--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRAD 74 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHH---------S--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHH-HHh---------h--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccc
Confidence 4677888999999999999999998 331 1 5778999999999999999999999999887511 1112
Q ss_pred ----hHHHHHHHHHHHhccCHHHHHHHHHhcccCC------------------------C-CccHhHHHHHHHHHHhcCc
Q 036589 87 ----EIIFCNVISFYGRARLLEHALQVFDEMPSFN------------------------V-QRTVKSLNTLLNALLTCGK 137 (176)
Q Consensus 87 ----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~------------------------~-~p~~~~~~~ll~~~~~~g~ 137 (176)
...+..+...|.+.|++++|+..|++..+.. . +.+...+..+...+...|+
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSD 154 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcC
Confidence 5788899999999999999999999887631 1 2345678888899999999
Q ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 138 LDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 138 ~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+++|.+.|++..+.... +..+|..+...|.+.|+++
T Consensus 155 ~~~A~~~~~~a~~~~~~--~~~~~~~l~~~~~~~~~~~ 190 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPE--DARGYSNRAAALAKLMSFP 190 (258)
T ss_dssp HHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhcCcc--cHHHHHHHHHHHHHhCCHH
Confidence 99999999999887654 7888999999999988764
No 35
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.16 E-value=3.1e-10 Score=82.65 Aligned_cols=145 Identities=7% Similarity=0.012 Sum_probs=122.1
Q ss_pred HHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHH
Q 036589 16 LHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVIS 95 (176)
Q Consensus 16 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~ 95 (176)
+...|++++|.+.|+++. .. .+.+...+..+...+.+.|++++|.+.+++..+. . +.+...+..+..
T Consensus 148 ~~~~~~~~~A~~~~~~~~-~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~-~~~~~~~~~l~~ 214 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAAL-EM----------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVEL-R-PDDAQLWNKLGA 214 (327)
T ss_dssp TTSHHHHHHHHHHHHHHH-HH----------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHH-hh----------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-C-CCcHHHHHHHHH
Confidence 778899999999999972 21 1236889999999999999999999999999876 2 345678899999
Q ss_pred HHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccc-----------chHHHHHH
Q 036589 96 FYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVL-----------DGLCSNLK 164 (176)
Q Consensus 96 ~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p-----------~~~t~~~l 164 (176)
.|.+.|++++|...|++..+.. +.+...+..+...+.+.|++++|.+.|++..+.... . +..+|..+
T Consensus 215 ~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~l 292 (327)
T 3cv0_A 215 TLANGNRPQEALDAYNRALDIN-PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG-GTTPTGEASREATRSMWDFF 292 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-SCC-----CCTHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cccccccchhhcCHHHHHHH
Confidence 9999999999999999987643 346788999999999999999999999998765433 2 57899999
Q ss_pred HHHhhccccCC
Q 036589 165 IIMNDSQVRVT 175 (176)
Q Consensus 165 i~~~~~~g~~~ 175 (176)
..+|.+.|+.+
T Consensus 293 ~~~~~~~g~~~ 303 (327)
T 3cv0_A 293 RMLLNVMNRPD 303 (327)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHhcCCHH
Confidence 99999998864
No 36
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.16 E-value=1.4e-09 Score=68.61 Aligned_cols=119 Identities=11% Similarity=-0.005 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHH
Q 036589 52 LHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA 131 (176)
Q Consensus 52 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 131 (176)
..|..+...+...|++++|..+++++.+. . ..+...+..+...+...|++++|...|+++.+.. +.+...+..+...
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~ 78 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL-D-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNA 78 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc-C-CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-CCchHHHHHHHHH
Confidence 35777889999999999999999999876 3 3456778889999999999999999999988654 3467788899999
Q ss_pred HHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 132 LLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 132 ~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+...|++++|.++|+++.+.... +..++..+...|.+.|+++
T Consensus 79 ~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la~~~~~~~~~~ 120 (136)
T 2fo7_A 79 YYKQGDYDEAIEYYQKALELDPR--SAEAWYNLGNAYYKQGDYD 120 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHTTTCHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHHccHH
Confidence 99999999999999999886543 6778888999999888764
No 37
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.14 E-value=1.8e-08 Score=71.67 Aligned_cols=156 Identities=10% Similarity=-0.055 Sum_probs=117.7
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
++..+..+...|.+.|++++|++.|+...... .........|..+...+...|++++|...|++..+.. +
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~--~ 105 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFSKV--------NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD--T 105 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTS--------CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--T
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--------CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--c
Confidence 45588888899999999999999999873311 1222235568889999999999999999999988762 2
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHH
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLK 164 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~l 164 (176)
-+...+..+...|...|++++|+..|++..+.. +.+...|..+...+...+++++|.+.|++..+.... +...+..+
T Consensus 106 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~--~~~~~~~~ 182 (272)
T 3u4t_A 106 TRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT-TTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPN--IYIGYLWR 182 (272)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--chHHHHHH
Confidence 355788889999999999999999999988663 335566666663444556999999999998876554 46677777
Q ss_pred HHHhhcccc
Q 036589 165 IIMNDSQVR 173 (176)
Q Consensus 165 i~~~~~~g~ 173 (176)
...+...|+
T Consensus 183 ~~~~~~~~~ 191 (272)
T 3u4t_A 183 ARANAAQDP 191 (272)
T ss_dssp HHHHHHHST
T ss_pred HHHHHHcCc
Confidence 777766665
No 38
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.13 E-value=1.1e-09 Score=73.15 Aligned_cols=134 Identities=8% Similarity=-0.016 Sum_probs=113.1
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
++..+..+...+...|++++|...|+.. ... .+.+...|..+...+...|++++|.+.+++..+. ..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--~~ 107 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERS-LAD----------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA--NP 107 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CT
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHH-Hhc----------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--Cc
Confidence 3446778888999999999999999997 221 1336788999999999999999999999999876 23
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKA 152 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~ 152 (176)
.+...+..+...|.+.|++++|...|++..+.. +.+...+..+...+...|++++|.+.+++..+..
T Consensus 108 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 108 INFNVRFRLGVALDNLGRFDEAIDSFKIALGLR-PNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 466788889999999999999999999988654 3467889999999999999999999999987653
No 39
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.12 E-value=5.3e-09 Score=71.92 Aligned_cols=145 Identities=10% Similarity=-0.063 Sum_probs=115.9
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+-..+...|++++|+..|++. .. |+...|..+..++.+.|++++|...|++..+. . ..+
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a-~~-------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-~~~ 70 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAV-QD-------------PHSRICFNIGCMYTILKNMTEAEKAFTRSINR-D-KHL 70 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTS-SS-------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHH-cC-------------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-ccc
Confidence 34556677888999999999999998 22 36789999999999999999999999999876 2 345
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCC--------------Cc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNV--------------QR-TVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~--------------~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
...+..+..+|.+.|++++|++.|++..+..- .| ....+..+...|.+.|++++|.+.|+...+.
T Consensus 71 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 71 AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 67888899999999999999999998875331 11 2367888999999999999999999999887
Q ss_pred cccccchHHHHHHHHHh
Q 036589 152 AIAVLDGLCSNLKIIMN 168 (176)
Q Consensus 152 ~~~~p~~~t~~~li~~~ 168 (176)
... .....+...+..+
T Consensus 151 ~p~-~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 151 KSE-PRHSKIDKAMECV 166 (213)
T ss_dssp CCS-GGGGHHHHHHHHH
T ss_pred Ccc-cccchHHHHHHHH
Confidence 655 4444444444444
No 40
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.11 E-value=1.2e-09 Score=80.22 Aligned_cols=150 Identities=9% Similarity=-0.095 Sum_probs=75.9
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC--
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP-- 85 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~-- 85 (176)
.+..+...+.+.|++++|+..|+.. ... .+.+...|..+..++...|++++|...|++..+. .|
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~~-~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---~~~~ 104 (359)
T 3ieg_A 39 AYYRRATVFLAMGKSKAALPDLTKV-IAL----------KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS---NPSE 104 (359)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS---CCCH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHH-HHh----------CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhc---CCcc
Confidence 4444455555555555555555554 110 0113445555555555555555555555555543 12
Q ss_pred --chHHHHHH------------HHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 86 --EEIIFCNV------------ISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 86 --~~~~~~~l------------i~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
+...+..+ ...+...|++++|++.|+++.+.. +.+...+..+...+...|++++|.+.+++..+.
T Consensus 105 ~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 183 (359)
T 3ieg_A 105 QEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKL 183 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 22222222 345555555555555555554322 234455555556666666666666666665554
Q ss_pred cccccchHHHHHHHHHhhccccC
Q 036589 152 AIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 152 ~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
... +..+|..+...|...|++
T Consensus 184 ~~~--~~~~~~~la~~~~~~~~~ 204 (359)
T 3ieg_A 184 KSD--NTEAFYKISTLYYQLGDH 204 (359)
T ss_dssp CSC--CHHHHHHHHHHHHHHTCH
T ss_pred CCC--CHHHHHHHHHHHHHcCCH
Confidence 332 455555565555555543
No 41
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.11 E-value=2.6e-09 Score=78.47 Aligned_cols=152 Identities=11% Similarity=-0.053 Sum_probs=125.3
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+-..+.+.|++++|+..|+++. .. .+.+...|..+..++...|++++|...+++..+. . +-+
T Consensus 4 ~~~~~~~~~~~~~g~~~~A~~~~~~~l-~~----------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~-~~~ 70 (359)
T 3ieg_A 4 EKHLELGKKLLAAGQLADALSQFHAAV-DG----------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIAL-K-MDF 70 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-hh----------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-C-CCc
Confidence 346677888999999999999999972 21 1236789999999999999999999999999976 2 235
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc----cHhHHHHH------------HHHHHhcCcHHHHHHHHHHHHh
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR----TVKSLNTL------------LNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p----~~~~~~~l------------l~~~~~~g~~~~a~~l~~~m~~ 150 (176)
...+..+..+|...|++++|+..|++..+.. | +...+..+ ...+...|++++|.++|+++.+
T Consensus 71 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 148 (359)
T 3ieg_A 71 TAARLQRGHLLLKQGKLDEAEDDFKKVLKSN--PSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILE 148 (359)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHcCChHHHHHHHHHHHhcC--CcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 5788899999999999999999999998654 4 44444444 5788999999999999999988
Q ss_pred ccccccchHHHHHHHHHhhccccCC
Q 036589 151 KAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 151 ~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
.... +...+..+...|...|+++
T Consensus 149 ~~~~--~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3ieg_A 149 VCVW--DAELRELRAECFIKEGEPR 171 (359)
T ss_dssp HCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred hCCC--chHHHHHHHHHHHHCCCHH
Confidence 7654 7788999999999888764
No 42
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.11 E-value=4.3e-09 Score=76.49 Aligned_cols=155 Identities=8% Similarity=-0.148 Sum_probs=93.4
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
+...+..+...+.+.|++++|..+|+++. .. .+.+...|..+..++...|++++|...++++.+. . +
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~-~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~-~ 86 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVC-QA----------APEREEAWRSLGLTQAENEKDGLAIIALNHARML-D-P 86 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-T
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-C-c
Confidence 34456667777777788888877777762 21 1225666777777777777777777777777665 1 2
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCC-------------------------C---------------------
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFN-------------------------V--------------------- 118 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~-------------------------~--------------------- 118 (176)
.+...+..+...|...|++++|++.|++..+.. .
T Consensus 87 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 166 (327)
T 3cv0_A 87 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALE 166 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHh
Confidence 345556666666666666666666665544211 0
Q ss_pred --CccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 119 --QRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 119 --~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
+.+...+..+...+.+.|++++|.+++++..+.... +..+|..+...|...|++
T Consensus 167 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~ 222 (327)
T 3cv0_A 167 MNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD--DAQLWNKLGATLANGNRP 222 (327)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCH
T ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHcCCH
Confidence 113445555566666666666666666666554332 455566666666655554
No 43
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.08 E-value=6.4e-10 Score=86.33 Aligned_cols=152 Identities=8% Similarity=-0.067 Sum_probs=127.7
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhc---------CChHHHHHHHHH
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA---------KMFDEMQQILHQ 76 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~---------g~~~~a~~~~~~ 76 (176)
+..|..+-..|.+.|++++|.+.|++. .. ..|+...|..+...+... |++++|.+.|++
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~a-l~-----------~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~ 204 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGA-LT-----------HCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKL 204 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHH-HT-----------TCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH-Hh-----------hCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHH
Confidence 457888899999999999999999998 33 235678899999999999 999999999999
Q ss_pred HhhcCCCCCchHHHHHHHHHHHhc--------cCHHHHHHHHHhcccCCCC---ccHhHHHHHHHHHHhcCcHHHHHHHH
Q 036589 77 LKHDTRVIPEEIIFCNVISFYGRA--------RLLEHALQVFDEMPSFNVQ---RTVKSLNTLLNALLTCGKLDRMKELF 145 (176)
Q Consensus 77 m~~~~g~~~~~~~~~~li~~~~~~--------g~~~~a~~~~~~m~~~~~~---p~~~~~~~ll~~~~~~g~~~~a~~l~ 145 (176)
..+. . .-+...|..+..+|... |++++|+..|++..+.. + -+...|..+-..|...|++++|.+.|
T Consensus 205 al~~-~-p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 281 (474)
T 4abn_A 205 AVQM-D-VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD-RKASSNPDLHLNRATLHKYEESYGEALEGF 281 (474)
T ss_dssp HHHH-C-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-GGGGGCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHh-C-CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC-CCcccCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9977 2 34577888899999999 99999999999988653 2 37888999999999999999999999
Q ss_pred HHHHhccccccchHHHHHHHHHhhccccC
Q 036589 146 ISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 146 ~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
++..+.... +...+..+...+...|++
T Consensus 282 ~~al~l~p~--~~~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 282 SQAAALDPA--WPEPQQREQQLLEFLSRL 308 (474)
T ss_dssp HHHHHHCTT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC--CHHHHHHHHHHHHHHHHH
Confidence 999887654 566777777777766654
No 44
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.07 E-value=1.8e-09 Score=83.93 Aligned_cols=151 Identities=13% Similarity=0.047 Sum_probs=126.1
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+-..+...|++++|.+.|+.. .. ..|+...|..+...+...|++++|...+++..+. . ..+.
T Consensus 245 ~~~~~g~~~~~~~~~~~A~~~~~~~-~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~-~~~~ 310 (537)
T 3fp2_A 245 ALCYTGIFHFLKNNLLDAQVLLQES-IN-----------LHPTPNSYIFLALTLADKENSQEFFKFFQKAVDL-N-PEYP 310 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HH-----------HCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHH-C-TTCH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHH-Hh-----------cCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhcc-C-CCCH
Confidence 3556667888899999999999998 22 2345788888999999999999999999999876 2 3456
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHH
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIM 167 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~ 167 (176)
.++..+...|...|++++|+..|++..+.. +.+...+..+...+...|++++|.++|++..+.... +...|..+...
T Consensus 311 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~ 387 (537)
T 3fp2_A 311 PTYYHRGQMYFILQDYKNAKEDFQKAQSLN-PENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPT--LPEVPTFFAEI 387 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CTHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--ChHHHHHHHHH
Confidence 788899999999999999999999988654 335678889999999999999999999999887654 67788899999
Q ss_pred hhccccCC
Q 036589 168 NDSQVRVT 175 (176)
Q Consensus 168 ~~~~g~~~ 175 (176)
|...|+++
T Consensus 388 ~~~~g~~~ 395 (537)
T 3fp2_A 388 LTDRGDFD 395 (537)
T ss_dssp HHHTTCHH
T ss_pred HHHhCCHH
Confidence 98888764
No 45
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.07 E-value=2.1e-08 Score=63.38 Aligned_cols=124 Identities=8% Similarity=-0.063 Sum_probs=102.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhH
Q 036589 45 KPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKS 124 (176)
Q Consensus 45 ~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~ 124 (176)
...+.+...|..+...+...|++++|...|++..+. ...+...+..+..+|...|++++|+..|++..+.. +.+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 86 (133)
T 2lni_A 10 HMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKG 86 (133)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHH
Confidence 444567889999999999999999999999999876 23367788889999999999999999999988643 346788
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcccc
Q 036589 125 LNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 125 ~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
+..+...+.+.|++++|.+.|++..+.... +...+..+...+.+.|+
T Consensus 87 ~~~la~~~~~~~~~~~A~~~~~~~~~~~p~--~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 87 YTRKAAALEAMKDYTKAMDVYQKALDLDSS--CKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGG--GTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCC--chHHHHHHHHHHHHhcC
Confidence 889999999999999999999999876554 56677777777766553
No 46
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.07 E-value=1.5e-09 Score=78.41 Aligned_cols=166 Identities=11% Similarity=0.014 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc------
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD------ 80 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~------ 80 (176)
.++..+...+...|++++|..+|+++..... .......+.....+..+...+...|++++|...+++....
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLE---KTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---HHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH---HHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 3577788899999999999999998722000 0000012335678889999999999999999999998764
Q ss_pred CCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC------CC-CccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc--
Q 036589 81 TRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF------NV-QRTVKSLNTLLNALLTCGKLDRMKELFISFNLK-- 151 (176)
Q Consensus 81 ~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~------~~-~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~-- 151 (176)
.........+..+...|...|++++|+..|++..+. +. ......+..+...+...|++++|.++|++..+.
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 184 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQ 184 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 123345678888999999999999999999988753 22 234567888899999999999999999998764
Q ss_pred ----cccccchHHHHHHHHHhhccccCC
Q 036589 152 ----AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 152 ----~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+.......++..+...|...|+++
T Consensus 185 ~~~~~~~~~~~~~~~~la~~~~~~g~~~ 212 (311)
T 3nf1_A 185 TKLGPDDPNVAKTKNNLASCYLKQGKFK 212 (311)
T ss_dssp HTSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 212034668888999999888764
No 47
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.06 E-value=7.6e-10 Score=85.43 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=92.7
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
+..+..+...+...|++++|+..|++. ... .+.+...|..+...+...|++++|...++++.+. ...
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~-~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~ 370 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKA-KEL----------DPENIFPYIQLACLAYRENKFDDCETLFSEAKRK--FPE 370 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHH-HHT----------CSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHH--STT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH-HHh----------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--ccc
Confidence 345556666666666777776666665 211 1113456666666666777777777777766654 122
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCC-Ccc----HhHHHHHHHHHHh---cCcHHHHHHHHHHHHhccccccc
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNV-QRT----VKSLNTLLNALLT---CGKLDRMKELFISFNLKAIAVLD 157 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~-~p~----~~~~~~ll~~~~~---~g~~~~a~~l~~~m~~~~~~~p~ 157 (176)
+...+..+...|.+.|++++|+..|+++.+..- .++ ...+..+...+.. .|++++|.+.|+...+.... +
T Consensus 371 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~--~ 448 (514)
T 2gw1_A 371 APEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR--S 448 (514)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT--C
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc--c
Confidence 345566666777777777777777766653210 011 2266666677777 77777777777776665432 5
Q ss_pred hHHHHHHHHHhhccccC
Q 036589 158 GLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 158 ~~t~~~li~~~~~~g~~ 174 (176)
..++..+...|.+.|++
T Consensus 449 ~~~~~~la~~~~~~g~~ 465 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDI 465 (514)
T ss_dssp HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhcCH
Confidence 56666666777666654
No 48
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.05 E-value=7.9e-10 Score=85.84 Aligned_cols=154 Identities=6% Similarity=-0.064 Sum_probs=129.7
Q ss_pred CCCCHHHHHHHHHhccCh-hHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 5 KPTSPFRLASLLHLQKHP-KLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
+...+..+-..+...|++ ++|++.|++.... .+-+...|..+..+|.+.|++++|.+.|++..+.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~-----------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--- 166 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKL-----------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH--- 166 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT---
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhh-----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---
Confidence 344667778889999999 9999999997222 1226789999999999999999999999999976
Q ss_pred CCchHHHHHHHHHHHhc---------cCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc--------CcHHHHHHHHH
Q 036589 84 IPEEIIFCNVISFYGRA---------RLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC--------GKLDRMKELFI 146 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~---------g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~--------g~~~~a~~l~~ 146 (176)
.|+...+..+...|... |++++|++.|++..+.. +-+...|..+...|... |++++|.+.|+
T Consensus 167 ~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~ 245 (474)
T 4abn_A 167 CKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD-VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYA 245 (474)
T ss_dssp CCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 46678889999999999 99999999999988654 34678899999999988 99999999999
Q ss_pred HHHhccc---cccchHHHHHHHHHhhccccCC
Q 036589 147 SFNLKAI---AVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 147 ~m~~~~~---~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+..+... . +...|..+-.+|...|+++
T Consensus 246 ~al~~~p~~~~--~~~~~~~lg~~~~~~g~~~ 275 (474)
T 4abn_A 246 QAEKVDRKASS--NPDLHLNRATLHKYEESYG 275 (474)
T ss_dssp HHHHHCGGGGG--CHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhCCCccc--CHHHHHHHHHHHHHcCCHH
Confidence 9987644 3 7888999999999988864
No 49
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.05 E-value=1.7e-08 Score=62.86 Aligned_cols=117 Identities=10% Similarity=0.032 Sum_probs=96.5
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...|..+...+...|++++|.+.++++.+. . ..+...+..+...+.+.|++++|+..|+++.+.. +.+...+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la 84 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-D-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLG 84 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-C-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHH
Confidence 4678888999999999999999999999876 2 3456788889999999999999999999988643 34678889999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcc
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~ 171 (176)
..+...|++++|.+.|+++.+.... +...+..+-..+...
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 85 NAYYKQGDYDEAIEYYQKALELDPN--NAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHhc
Confidence 9999999999999999999876554 555666665555443
No 50
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.1e-09 Score=84.55 Aligned_cols=152 Identities=11% Similarity=-0.004 Sum_probs=117.3
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+...|++++|...|+.+ ... .|+...|..+..++...|++++|...+++..+. ...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~A~~~~~~~-l~~-----------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~ 303 (514)
T 2gw1_A 238 ISLEHTGIFKFLKNDPLGAHEDIKKA-IEL-----------FPRVNSYIYMALIMADRNDSTEYYNYFDKALKL--DSNN 303 (514)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHH-HHH-----------CCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTT--CTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHH-Hhh-----------CccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhc--CcCC
Confidence 35667778888899999999999987 221 123777888888888899999999988888865 2335
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHH
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKII 166 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~ 166 (176)
...+..+...|...|++++|+..|++..+.. +.+...+..+...+...|++++|.++|+++.+.... +..+|..+..
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la~ 380 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKAKELD-PENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPE--APEVPNFFAE 380 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHHHHTC-SSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTT--CSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccc--CHHHHHHHHH
Confidence 5677888888888999999999888887543 235667888888888888999999888888776443 5677888888
Q ss_pred HhhccccCC
Q 036589 167 MNDSQVRVT 175 (176)
Q Consensus 167 ~~~~~g~~~ 175 (176)
.|.+.|+++
T Consensus 381 ~~~~~~~~~ 389 (514)
T 2gw1_A 381 ILTDKNDFD 389 (514)
T ss_dssp HHHHTTCHH
T ss_pred HHHHCCCHH
Confidence 888877754
No 51
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.04 E-value=1.4e-09 Score=77.34 Aligned_cols=142 Identities=13% Similarity=0.041 Sum_probs=108.8
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC-----
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT----- 81 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~----- 81 (176)
.++..+-..|...|++++|+..|++...... .......+....+|..+...|...|++++|...+++.....
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 120 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIRE---KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 120 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---HHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHH---HHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC
Confidence 3577888999999999999999998721100 00001123356789999999999999999999999987641
Q ss_pred -CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC------C-CCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 82 -RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF------N-VQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 82 -g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~------~-~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
.......++..+...|...|++++|+..|++..+. + ......++..+...|...|++++|.++|++..+.
T Consensus 121 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 121 KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 12345678888999999999999999999988754 1 1224577889999999999999999999988753
No 52
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.03 E-value=1.8e-08 Score=63.24 Aligned_cols=123 Identities=10% Similarity=-0.007 Sum_probs=104.1
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHH
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNT 127 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ 127 (176)
+.+...|..+...+...|++++|...+++.... . ..+...+..+..++...|++++|+..+++..+.. +.+...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~ 85 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL-N-PANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-PAYSKAYGR 85 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc-C-CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-ccCHHHHHH
Confidence 346778888999999999999999999999876 2 3356788889999999999999999999988643 345778889
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 128 LLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 128 ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+...+.+.|++++|.+.|++..+.... +...+..+...+.+.|+++
T Consensus 86 ~~~~~~~~~~~~~A~~~~~~~~~~~p~--~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 86 MGLALSSLNKHVEAVAYYKKALELDPD--NETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCcc--chHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999887554 6778888889998888764
No 53
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.03 E-value=1.5e-09 Score=71.32 Aligned_cols=144 Identities=9% Similarity=-0.022 Sum_probs=112.6
Q ss_pred HHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHH
Q 036589 14 SLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNV 93 (176)
Q Consensus 14 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~l 93 (176)
..+...|++++|+..|+... . ..+-+...+-.+...|.+.|++++|.+.|++..+.. +-+...|..+
T Consensus 5 ~~~~~~~~~e~ai~~~~~a~-~----------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~--p~~~~a~~~l 71 (150)
T 4ga2_A 5 SMRRSKADVERYIASVQGST-P----------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ--ERDPKAHRFL 71 (150)
T ss_dssp --CCCHHHHHHHHHHHHHHS-C----------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHHhc-c----------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHH
Confidence 34556789999999999872 2 112234456678899999999999999999998762 3367788999
Q ss_pred HHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHH-HHHHHhccccccchHHHHHHHHHhhccc
Q 036589 94 ISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKEL-FISFNLKAIAVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 94 i~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l-~~~m~~~~~~~p~~~t~~~li~~~~~~g 172 (176)
-.+|.+.|++++|+..|++..+.. +-+...|..+...|.+.|++++|.+. +++..+..+. +..+|...-..+.+.|
T Consensus 72 g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~--~~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 72 GLLYELEENTDKAVECYRRSVELN-PTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPG--SPAVYKLKEQLLDCEG 148 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTT--CHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCchHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcC--CHHHHHHHHHHHHHhC
Confidence 999999999999999999988654 23577899999999999999877765 5777776554 6777888877777776
Q ss_pred c
Q 036589 173 R 173 (176)
Q Consensus 173 ~ 173 (176)
+
T Consensus 149 ~ 149 (150)
T 4ga2_A 149 E 149 (150)
T ss_dssp C
T ss_pred c
Confidence 4
No 54
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.03 E-value=5.8e-09 Score=72.68 Aligned_cols=153 Identities=6% Similarity=-0.090 Sum_probs=120.6
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
++..+...-..+.+.|++++|+..|+...... + +++...+..+..++...|++++|...|++..+. . +
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~-p 73 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLT--------N--NQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK-N-Y 73 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--------T--TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-T-C
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhcc--------C--CCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh-C-c
Confidence 44567777888999999999999999872221 1 146777777999999999999999999999976 2 2
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccH-------hHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccc
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTV-------KSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLD 157 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~-------~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~ 157 (176)
-+...|..+..+|...|++++|+..|++..+.. +.+. ..|..+-..+...|++++|.+.|++..+.. |+
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---p~ 149 (228)
T 4i17_A 74 NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV-PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT---SK 149 (228)
T ss_dssp SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS---CH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC---CC
Confidence 366788889999999999999999999988543 2233 457778888899999999999999988752 44
Q ss_pred ---hHHHHHHHHHhhcccc
Q 036589 158 ---GLCSNLKIIMNDSQVR 173 (176)
Q Consensus 158 ---~~t~~~li~~~~~~g~ 173 (176)
...|..+-..|...|+
T Consensus 150 ~~~~~~~~~l~~~~~~~~~ 168 (228)
T 4i17_A 150 KWKTDALYSLGVLFYNNGA 168 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHH
Confidence 5677777777665554
No 55
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.01 E-value=2.1e-09 Score=77.67 Aligned_cols=140 Identities=13% Similarity=0.045 Sum_probs=107.2
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC------
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT------ 81 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~------ 81 (176)
.+..+...|...|++++|...|++...... .......+.....|..+...+...|++++|...+++..+..
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 147 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIRE---KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 147 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC
Confidence 467788889999999999999988721100 00001113356788999999999999999999999988651
Q ss_pred CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC------CCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 82 RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF------NVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~------~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
........+..+...|...|++++|++.|++..+. +..| ...++..+...|...|++++|.+.|++..+
T Consensus 148 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 148 DHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 22335567888999999999999999999988753 2123 456788899999999999999999999875
No 56
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.01 E-value=7.8e-09 Score=73.49 Aligned_cols=129 Identities=10% Similarity=-0.136 Sum_probs=82.0
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+...|++++|+..|++.. .. .+.+...|..+...+...|++++|...|++..+. . +.+
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al-~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-~-~~~ 110 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQAL-AI----------RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL-D-PTY 110 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHH-Hc----------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-C-ccc
Confidence 345666777777777777777777762 21 1225667777777777777777777777777765 1 224
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
...+..+..+|.+.|++++|...|+++.+.. |+.......+..+...|++++|...+.+...
T Consensus 111 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 172 (275)
T 1xnf_A 111 NYAHLNRGIALYYGGRDKLAQDDLLAFYQDD--PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFE 172 (275)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5666777777777777777777777776432 4444444444444555666666666655443
No 57
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.01 E-value=7.4e-09 Score=73.63 Aligned_cols=150 Identities=9% Similarity=-0.015 Sum_probs=117.5
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
|+..+...-..+...|++++|+..|++..... +.+...|..+..++...|++++|...+++..+. +..
T Consensus 2 n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----------p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~ 69 (272)
T 3u4t_A 2 NDDVEFRYADFLFKNNNYAEAIEVFNKLEAKK-----------YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK-VNA 69 (272)
T ss_dssp ---CHHHHHHHHHTTTCHHHHHHHHHHHHHTT-----------CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-SCT
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----------CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-cCc
Confidence 34566777889999999999999999972221 124457888899999999999999999999985 432
Q ss_pred Cc--hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHH
Q 036589 85 PE--EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSN 162 (176)
Q Consensus 85 ~~--~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~ 162 (176)
++ ...|..+...|...|++++|+..|++..+.. +.+...|..+...|...|++++|.+.|++..+.... +...|.
T Consensus 70 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~ 146 (272)
T 3u4t_A 70 TKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD-TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT--DPKVFY 146 (272)
T ss_dssp TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC--CHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC--cHHHHH
Confidence 32 3458889999999999999999999988643 336678999999999999999999999998877443 566666
Q ss_pred HHH-HHhh
Q 036589 163 LKI-IMND 169 (176)
Q Consensus 163 ~li-~~~~ 169 (176)
.+. ..|.
T Consensus 147 ~l~~~~~~ 154 (272)
T 3u4t_A 147 ELGQAYYY 154 (272)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 666 4443
No 58
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.00 E-value=7.1e-09 Score=75.84 Aligned_cols=153 Identities=8% Similarity=0.010 Sum_probs=116.5
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC-cHH-HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY-NLL-HYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
..|..+...+.+.|++++|.++|++.. .. .| +.. .|..+...+.+.|++++|..+|++..+. . .
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al-~~-----------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-~-p 165 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLL-AI-----------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-A-R 165 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-TS-----------SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS-T-T
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHH-hc-----------cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-C-C
Confidence 368888999999999999999999972 21 22 233 7888999999999999999999999876 2 2
Q ss_pred CchHHHHHHHHHHH-hccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcc-cccc--chHH
Q 036589 85 PEEIIFCNVISFYG-RARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKA-IAVL--DGLC 160 (176)
Q Consensus 85 ~~~~~~~~li~~~~-~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~-~~~p--~~~t 160 (176)
.+...|........ ..|++++|..+|+...+.. +-+...|..++..+.+.|++++|..+|++..+.. ++ | ....
T Consensus 166 ~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~-p~~~~~l 243 (308)
T 2ond_A 166 TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLP-PEKSGEI 243 (308)
T ss_dssp CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSC-GGGCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCC-HHHHHHH
Confidence 33444443333322 3699999999999887532 2367888899999999999999999999998863 44 5 3667
Q ss_pred HHHHHHHhhccccCC
Q 036589 161 SNLKIIMNDSQVRVT 175 (176)
Q Consensus 161 ~~~li~~~~~~g~~~ 175 (176)
|..++..+.+.|+.+
T Consensus 244 ~~~~~~~~~~~g~~~ 258 (308)
T 2ond_A 244 WARFLAFESNIGDLA 258 (308)
T ss_dssp HHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHcCCHH
Confidence 888888887777653
No 59
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.99 E-value=4.8e-09 Score=79.40 Aligned_cols=150 Identities=7% Similarity=0.008 Sum_probs=125.9
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC-hHHHHHHHHHHhhcCCCCCc
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM-FDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~-~~~a~~~~~~m~~~~g~~~~ 86 (176)
.|+.+-..+.+.|++++|++.|++.... .+-+...|+.+..++...|+ +++|...|++..+. . .-+
T Consensus 99 a~~~lg~~~~~~g~~~~Al~~~~~al~l-----------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l-~-P~~ 165 (382)
T 2h6f_A 99 VYDYFRAVLQRDERSERAFKLTRDAIEL-----------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE-Q-PKN 165 (382)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHh-----------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH-C-CCC
Confidence 4677778888999999999999997221 12368889999999999997 99999999999976 2 236
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHH
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKII 166 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~ 166 (176)
...|+.+-.++.+.|++++|+..|++..+.. +-+...|..+-.++.+.|++++|++.|+++.+.... +...|+.+-.
T Consensus 166 ~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld-P~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~--~~~a~~~lg~ 242 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPSQELEFIADILNQD-AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR--NNSVWNQRYF 242 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--CHHHHHHHHH
Confidence 6788899999999999999999999998654 347788999999999999999999999999988775 7888888888
Q ss_pred Hhhc-ccc
Q 036589 167 MNDS-QVR 173 (176)
Q Consensus 167 ~~~~-~g~ 173 (176)
++.+ .|+
T Consensus 243 ~l~~l~~~ 250 (382)
T 2h6f_A 243 VISNTTGY 250 (382)
T ss_dssp HHHHTTCS
T ss_pred HHHHhcCc
Confidence 8887 454
No 60
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.99 E-value=9.4e-09 Score=69.18 Aligned_cols=133 Identities=11% Similarity=-0.014 Sum_probs=112.0
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
++..+..+...|.+.|++++|+..++... .. .+-+...+..+...+...++++.+...+++..+. .+
T Consensus 38 ~~~~~~~la~~~~~~~~~~~a~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~--~~ 104 (184)
T 3vtx_A 38 NVETLLKLGKTYMDIGLPNDAIESLKKFV-VL----------DTTSAEAYYILGSANFMIDEKQAAIDALQRAIAL--NT 104 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CT
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHH-hc----------CchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--Cc
Confidence 34467788889999999999999999872 21 1236778888889999999999999999998876 23
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
-+...+..+..+|.+.|++++|++.|++..+.. +.+...|..+-..|.+.|++++|.+.|++..+.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 105 VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-PGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-chhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 456778889999999999999999999988654 346788999999999999999999999998874
No 61
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.98 E-value=1.4e-08 Score=68.22 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=115.1
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+.+.|++++|...|++.... .+-+...|..+..++.+.|++++|...++...... |+
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~---p~ 72 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDE-----------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEY---QD 72 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHH-----------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG---CC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc---CC
Confidence 35677788899999999999999998322 13367889999999999999999999999988662 33
Q ss_pred hHHHHHHHHH-HHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 87 EIIFCNVISF-YGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 87 ~~~~~~li~~-~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
...+..+... +...+...+|+..|++..+.. +-+...+..+-..+...|++++|.+.|++..+......+...+..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~-P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~ 151 (176)
T 2r5s_A 73 NSYKSLIAKLELHQQAAESPELKRLEQELAAN-PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFM 151 (176)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccchHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHH
Confidence 3322222111 122223345788888877543 23578889999999999999999999999988765412467899999
Q ss_pred HHhhccccCC
Q 036589 166 IMNDSQVRVT 175 (176)
Q Consensus 166 ~~~~~~g~~~ 175 (176)
..|...|+.+
T Consensus 152 ~~~~~~g~~~ 161 (176)
T 2r5s_A 152 DILSALGQGN 161 (176)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHHhCCCC
Confidence 9999999876
No 62
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.98 E-value=4.5e-09 Score=74.74 Aligned_cols=128 Identities=10% Similarity=-0.042 Sum_probs=105.0
Q ss_pred HHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHH
Q 036589 16 LHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVIS 95 (176)
Q Consensus 16 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~ 95 (176)
+...|++++|+..|+++.... ....+.+...|..+..++...|++++|...|++..+. . +.+...|..+..
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~-~~~~~~~~~la~ 85 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASR-------ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI-R-PDMPEVFNYLGI 85 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-CCCHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHhcc-------cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc-C-CCcHHHHHHHHH
Confidence 445689999999999983221 0111235778999999999999999999999999977 2 346788999999
Q ss_pred HHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 96 FYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 96 ~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
.|...|++++|+..|++..+.. +.+...+..+...|.+.|++++|.+.|+++.+...
T Consensus 86 ~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 142 (275)
T 1xnf_A 86 YLTQAGNFDAAYEAFDSVLELD-PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDP 142 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHccCHHHHHHHHHHHHhcC-ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 9999999999999999988653 33678899999999999999999999999987544
No 63
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.91 E-value=6.3e-08 Score=70.75 Aligned_cols=153 Identities=10% Similarity=-0.006 Sum_probs=115.6
Q ss_pred CCHHHHHHHHH-------hccCh-------hHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHH
Q 036589 7 TSPFRLASLLH-------LQKHP-------KLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQ 72 (176)
Q Consensus 7 ~~~~~l~~~~~-------~~~~~-------~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~ 72 (176)
..|..+...+. +.|++ ++|..+|++....- .+-+...|..++..+.+.|++++|.+
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~----------~p~~~~~~~~~~~~~~~~~~~~~A~~ 120 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL----------LKKNMLLYFAYADYEESRMKYEKVHS 120 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT----------TTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh----------CcccHHHHHHHHHHHHhcCCHHHHHH
Confidence 34556666654 35886 89999999973211 12256789999999999999999999
Q ss_pred HHHHHhhcCCCCCch--HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHH-hcCcHHHHHHHHHHHH
Q 036589 73 ILHQLKHDTRVIPEE--IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALL-TCGKLDRMKELFISFN 149 (176)
Q Consensus 73 ~~~~m~~~~g~~~~~--~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~-~~g~~~~a~~l~~~m~ 149 (176)
+|++..+. .|+. ..|..+...+.+.|++++|..+|++..+.. +++...|........ ..|++++|.++|++..
T Consensus 121 ~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al 196 (308)
T 2ond_A 121 IYNRLLAI---EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 196 (308)
T ss_dssp HHHHHHTS---SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST-TCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHhc---cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999975 3432 279999999999999999999999998654 234444443333322 3699999999999998
Q ss_pred hccccccchHHHHHHHHHhhccccCC
Q 036589 150 LKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 150 ~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+.... +...|..++..+.+.|+++
T Consensus 197 ~~~p~--~~~~~~~~~~~~~~~g~~~ 220 (308)
T 2ond_A 197 KKYGD--IPEYVLAYIDYLSHLNEDN 220 (308)
T ss_dssp HHHTT--CHHHHHHHHHHHHTTCCHH
T ss_pred HhCCC--cHHHHHHHHHHHHHCCCHH
Confidence 76543 6788999999998888754
No 64
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.91 E-value=3e-08 Score=78.36 Aligned_cols=137 Identities=4% Similarity=-0.115 Sum_probs=101.1
Q ss_pred ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHH
Q 036589 19 QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYG 98 (176)
Q Consensus 19 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~ 98 (176)
.|++++|++.|++.. +. .+-+...|..+...+.+.|++++|.+.|++..+.. .-+...+..+..+|.
T Consensus 2 ~g~~~~A~~~~~~al-~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~ 68 (568)
T 2vsy_A 2 TADGPRELLQLRAAV-RH----------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH--PGHPEAVARLGRVRW 68 (568)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS--TTCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHH
Confidence 478899999999872 21 12367889999999999999999999999998762 335678888999999
Q ss_pred hccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcc
Q 036589 99 RARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 99 ~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~ 171 (176)
+.|++++|.+.|++..+.. +-+...+..+...|.+.|++++|.+.|++..+.... +...+..+...+...
T Consensus 69 ~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 69 TQQRHAEAAVLLQQASDAA-PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE--EPYITAQLLNWRRRL 138 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHh
Confidence 9999999999999988653 335778999999999999999999999999887654 677888888888888
No 65
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.89 E-value=1.2e-08 Score=79.27 Aligned_cols=119 Identities=9% Similarity=0.013 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC-----CCccHhHHH
Q 036589 52 LHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN-----VQRTVKSLN 126 (176)
Q Consensus 52 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~-----~~p~~~~~~ 126 (176)
..|..+..++...|++++|...+++..+. ...+...+..+...|.+.|++++|++.|++..+.. .......+.
T Consensus 345 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 422 (537)
T 3fp2_A 345 YPYIQLACLLYKQGKFTESEAFFNETKLK--FPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLI 422 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 34444444444444444444444444433 11223344444444444445444444444443211 000111122
Q ss_pred HHHHHHHhc----------CcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 127 TLLNALLTC----------GKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 127 ~ll~~~~~~----------g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
.+...+.+. |++++|...|++..+.... +...|..+...|.+.|++
T Consensus 423 ~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~--~~~~~~~l~~~~~~~g~~ 478 (537)
T 3fp2_A 423 GKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPR--SEQAKIGLAQLKLQMEKI 478 (537)
T ss_dssp HHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhccH
Confidence 222333333 5555555555554443332 445566666666666554
No 66
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.89 E-value=3.4e-08 Score=70.28 Aligned_cols=155 Identities=7% Similarity=-0.116 Sum_probs=115.4
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC-
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP- 85 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~- 85 (176)
..+..+-..+.+.|++++|+..|+.+.... +..+.....+..+..++.+.|++++|...|++..+...-.|
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~--------p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 87 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTYG--------RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR 87 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--------SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch
Confidence 345566778889999999999999983221 22222267888899999999999999999999998632122
Q ss_pred chHHHHHHHHHHHh--------ccCHHHHHHHHHhcccCCCCcc-HhHH-----------------HHHHHHHHhcCcHH
Q 036589 86 EEIIFCNVISFYGR--------ARLLEHALQVFDEMPSFNVQRT-VKSL-----------------NTLLNALLTCGKLD 139 (176)
Q Consensus 86 ~~~~~~~li~~~~~--------~g~~~~a~~~~~~m~~~~~~p~-~~~~-----------------~~ll~~~~~~g~~~ 139 (176)
....+..+..++.+ .|++++|+..|++..+.. |+ .... ..+...|.+.|+++
T Consensus 88 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 165 (261)
T 3qky_A 88 VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY--PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYE 165 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC--TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC--cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 24566778888888 999999999999988543 33 2333 45578889999999
Q ss_pred HHHHHHHHHHhcccccc-chHHHHHHHHHhhcc
Q 036589 140 RMKELFISFNLKAIAVL-DGLCSNLKIIMNDSQ 171 (176)
Q Consensus 140 ~a~~l~~~m~~~~~~~p-~~~t~~~li~~~~~~ 171 (176)
+|...|++..+.....| ....+..+..+|...
T Consensus 166 ~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 166 AAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 99999999987544312 345677777777665
No 67
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.89 E-value=1.9e-08 Score=73.07 Aligned_cols=152 Identities=12% Similarity=-0.044 Sum_probs=118.9
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchH
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEI 88 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~ 88 (176)
+..+-..+.+.|++++|.+.|++.... .+-+...+..+...+...|++++|...+++.... .|+..
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~-----------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~---~p~~~ 185 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQL-----------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ---DQDTR 185 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG---GCSHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHh-----------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh---hcchH
Confidence 345566788899999999999997222 1236778888999999999999999999998866 24433
Q ss_pred HH-HHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHH
Q 036589 89 IF-CNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIM 167 (176)
Q Consensus 89 ~~-~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~ 167 (176)
.. ......+.+.++.++|+..|++..+.. +.+...+..+-..+...|++++|.+.|.+..+......+...+..+...
T Consensus 186 ~~~~~~~~~l~~~~~~~~a~~~l~~al~~~-P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~ 264 (287)
T 3qou_A 186 YQGLVAQIELLXQAADTPEIQQLQQQVAEN-PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEI 264 (287)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCccHHHHHHHHhcC-CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHH
Confidence 22 223334667788888999998887554 4467889999999999999999999999998876542347889999999
Q ss_pred hhccccCC
Q 036589 168 NDSQVRVT 175 (176)
Q Consensus 168 ~~~~g~~~ 175 (176)
|...|+.+
T Consensus 265 ~~~~g~~~ 272 (287)
T 3qou_A 265 LAALGTGD 272 (287)
T ss_dssp HHHHCTTC
T ss_pred HHHcCCCC
Confidence 99998875
No 68
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.88 E-value=5.2e-08 Score=71.38 Aligned_cols=155 Identities=13% Similarity=0.032 Sum_probs=113.1
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
++..+...+-.++...|++++|++++.+..... + -.-+...+..++..+.+.|+.+.|.+.+++|.+.
T Consensus 98 ~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~--------~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--- 165 (310)
T 3mv2_B 98 NSPYELYLLATAQAILGDLDKSLETCVEGIDND--------E-AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--- 165 (310)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSS--------C-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccC--------C-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---
Confidence 445556677888999999999999999861221 1 0237888999999999999999999999999865
Q ss_pred CC-----chHHHHHHHHHH--Hhcc--CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcc--
Q 036589 84 IP-----EEIIFCNVISFY--GRAR--LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKA-- 152 (176)
Q Consensus 84 ~~-----~~~~~~~li~~~--~~~g--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~-- 152 (176)
.| +..+...|..++ ...| ++.+|..+|+++.+. .|+..+-..++.++.+.|++++|.+.++.+.+..
T Consensus 166 ~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~ 243 (310)
T 3mv2_B 166 IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT--FPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYS 243 (310)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT--SCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHH
T ss_pred CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh--CCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence 45 466666677663 3334 899999999998754 3554455566668999999999999999776531
Q ss_pred -------ccccchHHHHHHHHHhhcccc
Q 036589 153 -------IAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 153 -------~~~p~~~t~~~li~~~~~~g~ 173 (176)
-+ -+..+.-.+|......|+
T Consensus 244 ~~~k~~~~p-~~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 244 VEQKENAVL-YKPTFLANQITLALMQGL 270 (310)
T ss_dssp TTTCHHHHS-SHHHHHHHHHHHHHHTTC
T ss_pred ccccccCCC-CCHHHHHHHHHHHHHhCh
Confidence 13 466677555544444443
No 69
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.87 E-value=2e-07 Score=59.29 Aligned_cols=110 Identities=6% Similarity=-0.010 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
...|......|.+.|++++|...|++..+.. +-+...|..+..+|.+.|++++|+..|++..+.. +.+...|..+-.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~ 89 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD--PENAILYSNRAACLTKLMEFQRALDDCDTCIRLD-SKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh-hhhhHHHHHHHH
Confidence 4578889999999999999999999998762 3467888899999999999999999999988654 346788999999
Q ss_pred HHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+|...|++++|.+.|++..+..+. +...+..|-
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~--~~~a~~~l~ 122 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPS--NEEAREGVR 122 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcC--CHHHHHHHH
Confidence 999999999999999999886554 455555443
No 70
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.86 E-value=1.1e-08 Score=72.75 Aligned_cols=156 Identities=11% Similarity=-0.012 Sum_probs=113.6
Q ss_pred HHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc------CCCCCchHH
Q 036589 16 LHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD------TRVIPEEII 89 (176)
Q Consensus 16 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~------~g~~~~~~~ 89 (176)
....|++++|+.+|++...... .......+....+|..+...+...|++++|...+++..+. ........+
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 87 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLE---KTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAAT 87 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHH---HHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence 3456777777777766521000 0000112335678999999999999999999999998865 122345678
Q ss_pred HHHHHHHHHhccCHHHHHHHHHhcccC------C-CCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc------c-ccc
Q 036589 90 FCNVISFYGRARLLEHALQVFDEMPSF------N-VQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK------A-IAV 155 (176)
Q Consensus 90 ~~~li~~~~~~g~~~~a~~~~~~m~~~------~-~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~------~-~~~ 155 (176)
+..+...|...|++++|++.|++..+. . .+.....+..+...|...|++++|.++|++..+. + .+
T Consensus 88 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~- 166 (283)
T 3edt_B 88 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDP- 166 (283)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCH-
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCH-
Confidence 899999999999999999999988753 1 1335677889999999999999999999998765 1 22
Q ss_pred cchHHHHHHHHHhhccccCC
Q 036589 156 LDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 156 p~~~t~~~li~~~~~~g~~~ 175 (176)
....++..+...|.+.|+++
T Consensus 167 ~~~~~~~~la~~~~~~g~~~ 186 (283)
T 3edt_B 167 NVAKTKNNLASCYLKQGKYQ 186 (283)
T ss_dssp HHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHH
Confidence 34678888999998888764
No 71
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.86 E-value=1.1e-07 Score=68.00 Aligned_cols=124 Identities=10% Similarity=-0.041 Sum_probs=77.3
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----cCChHHHHHHHHHHhhcCCC
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR----AKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~~g~ 83 (176)
.+..+-..+.+.|++++|++.|++. .+.+ +...+..+...|.. .+++++|...|++..+. +
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a-~~~~------------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-~- 72 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKA-CDLK------------ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL-N- 72 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHTT------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-T-
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHH-HHCC------------CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC-C-
Confidence 4455556666667777777777665 2211 44556666666666 66777777777666665 3
Q ss_pred CCchHHHHHHHHHHHh----ccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHhc
Q 036589 84 IPEEIIFCNVISFYGR----ARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT----CGKLDRMKELFISFNLK 151 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~~ 151 (176)
+...+..+-..|.. .+++++|+..|++..+.+ +...+..+-..|.. .+++++|.+.|++..+.
T Consensus 73 --~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 73 --YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp --CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 45556666666666 666777776666666543 55566666666666 66666666666666554
No 72
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.83 E-value=2.5e-07 Score=61.20 Aligned_cols=118 Identities=10% Similarity=-0.089 Sum_probs=95.9
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHH
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNT 127 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ 127 (176)
..+...|..+...+.+.|++++|...|++..+.. .-+...|..+..+|.+.|++++|+..|++..+.. +-+...|..
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~ 84 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA--PANPIYLSNRAAAYSASGQHEKAAEDAELATVVD-PKYSKAWSR 84 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHH
Confidence 4467789999999999999999999999999762 3367788899999999999999999999988654 336788999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHh
Q 036589 128 LLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMN 168 (176)
Q Consensus 128 ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~ 168 (176)
+-.+|...|++++|.+.|++..+.....++......+..+.
T Consensus 85 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999999999999987655424443444444333
No 73
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.81 E-value=3e-07 Score=63.88 Aligned_cols=121 Identities=7% Similarity=-0.142 Sum_probs=99.4
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
|+..|......+...|++++|...|++..+. ...++...+..+..++.+.|++++|+..|++..+.. +-+...|..+-
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~ 83 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKL-TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN-YNLANAYIGKS 83 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-cchHHHHHHHH
Confidence 5688888999999999999999999999987 443677777779999999999999999999988654 33667888999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccch-------HHHHHHHHHhhccccC
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDG-------LCSNLKIIMNDSQVRV 174 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~-------~t~~~li~~~~~~g~~ 174 (176)
..|...|++++|.+.|++..+.... +. ..|..+-..+.+.|++
T Consensus 84 ~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~~~~g~~~~~~~~~ 133 (228)
T 4i17_A 84 AAYRDMKNNQEYIATLTEGIKAVPG--NATIEKLYAIYYLKEGQKFQQAGNI 133 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHcccHHHHHHHHHHHHHHCCC--cHHHHHHHHHHHHHHhHHHHHhccH
Confidence 9999999999999999999876554 34 4466666666666654
No 74
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.80 E-value=8.8e-08 Score=78.01 Aligned_cols=121 Identities=8% Similarity=-0.014 Sum_probs=106.3
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...|+.+...+.+.|++++|.+.|++..+.. .-+...|+.+-.+|.+.|++++|++.|++..+.. +-+...|+.+-
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~--P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~-P~~~~a~~nLg 84 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVF--PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS-PTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Confidence 57789999999999999999999999998762 2346788999999999999999999999988654 23578899999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
..|...|++++|++.|++..+.... +...|+.+-..|.+.|+++
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~--~~~a~~~Lg~~~~~~g~~~ 128 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPA--FADAHSNLASIHKDSGNIP 128 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999887665 7889999999999999875
No 75
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.80 E-value=1.1e-07 Score=62.41 Aligned_cols=129 Identities=8% Similarity=-0.100 Sum_probs=98.3
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+-..+...|++++|...|+..... .+.+...|..+..++...|++++|...+++..+. . ..+.
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~~-----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-~-~~~~ 81 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIEL-----------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL-D-KKYI 81 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh-----------CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-cccH
Confidence 3566677888899999999999986221 1236788888999999999999999999998876 2 3456
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHH--HHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL--NTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~--~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
..+..+..++...|++++|...|++..+.. +.+...+ -.+...+.+.|++++|.+.+....+
T Consensus 82 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 82 KGYYRRAASNMALGKFRAALRDYETVVKVK-PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 678888899999999999999999887543 2233444 3344447788999999999887653
No 76
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.79 E-value=9.6e-08 Score=75.47 Aligned_cols=135 Identities=10% Similarity=-0.113 Sum_probs=113.5
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
...+..+-..+.+.|++++|.+.|++. .+. .+.+...|..+..++...|++++|.+.+++..+. . .-
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-p~ 89 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRG-LAL----------HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDA-A-PE 89 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHH-HTT----------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh----------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-C-CC
Confidence 446778888999999999999999997 231 1236888999999999999999999999999876 2 33
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc---CcHHHHHHHHHHHHhcccc
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC---GKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~---g~~~~a~~l~~~m~~~~~~ 154 (176)
+...+..+..+|.+.|++++|++.|++..+.. +.+...+..+...+... |++++|.+.+++..+.+..
T Consensus 90 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 90 HPGIALWLGHALEDAGQAEAAAAAYTRAHQLL-PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCc
Confidence 56788899999999999999999999988654 33577888999999999 9999999999999876554
No 77
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.78 E-value=5.2e-07 Score=64.36 Aligned_cols=139 Identities=12% Similarity=-0.014 Sum_probs=85.3
Q ss_pred CHHHHHHHHHh----ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----cCChHHHHHHHHHHhh
Q 036589 8 SPFRLASLLHL----QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR----AKMFDEMQQILHQLKH 79 (176)
Q Consensus 8 ~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~ 79 (176)
.+..+-..|.+ .+++++|+..|++. .+. + +...+..+...|.. .+++++|...|++..+
T Consensus 40 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a-~~~---------~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 106 (273)
T 1ouv_A 40 GCFNLGVLYYQGQGVEKNLKKAASFYAKA-CDL---------N---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 106 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHH-HHT---------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCHHHHHHHHHHH-HHC---------C---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHH
Confidence 34555566666 77777777777776 221 1 56666667777777 7777777777777766
Q ss_pred cCCCCCchHHHHHHHHHHHh----ccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHhc
Q 036589 80 DTRVIPEEIIFCNVISFYGR----ARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT----CGKLDRMKELFISFNLK 151 (176)
Q Consensus 80 ~~g~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~~ 151 (176)
. + +...+..+-..|.. .+++++|+..|++..+.+ +...+..+-..|.. .+++++|.+.|++..+.
T Consensus 107 ~-~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 107 L-K---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN---DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp T-T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred c-C---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC---cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 5 3 45566666666666 677777777777666544 44455555566655 66666666666666554
Q ss_pred cccccchHHHHHHHHHhhc
Q 036589 152 AIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 152 ~~~~p~~~t~~~li~~~~~ 170 (176)
+ +...+..+-..|..
T Consensus 180 ~----~~~a~~~lg~~~~~ 194 (273)
T 1ouv_A 180 K----DSPGCFNAGNMYHH 194 (273)
T ss_dssp T----CHHHHHHHHHHHHH
T ss_pred C----CHHHHHHHHHHHHc
Confidence 2 22344444444444
No 78
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.78 E-value=7.6e-07 Score=54.62 Aligned_cols=111 Identities=9% Similarity=-0.048 Sum_probs=91.2
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
....|..+...+...|++++|...|++.... . +.+...+..+..++.+.|++++|...+++..+.. +.+...+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a 79 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL-D-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-C-CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-cccHHHHHHHH
Confidence 5677888999999999999999999999876 2 3356778889999999999999999999988653 33677888999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
..+...|++++|.+.|++..+.... +...+..+-
T Consensus 80 ~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~l~ 113 (118)
T 1elw_A 80 AALEFLNRFEEAKRTYEEGLKHEAN--NPQLKEGLQ 113 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTT--CHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHcCCC--CHHHHHHHH
Confidence 9999999999999999998876554 444444443
No 79
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.77 E-value=3.6e-08 Score=74.59 Aligned_cols=152 Identities=9% Similarity=-0.042 Sum_probs=125.7
Q ss_pred CCCCHHHHHHHHHhccC-hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 5 KPTSPFRLASLLHLQKH-PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~-~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
+...|+.+-..+.+.|+ +++|+..|++.. .. .+-+...|+.+..++.+.|++++|...|++..+..
T Consensus 130 ~~~a~~~~g~~l~~~g~d~~eAl~~~~~al-~l----------~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld-- 196 (382)
T 2h6f_A 130 NYTVWHFRRVLLKSLQKDLHEEMNYITAII-EE----------QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQD-- 196 (382)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHcccCHHHHHHHHHHHH-HH----------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--
Confidence 34567888889999997 999999999972 21 12378899999999999999999999999999762
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh-cCcHHHH-----HHHHHHHHhccccccc
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT-CGKLDRM-----KELFISFNLKAIAVLD 157 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~-~g~~~~a-----~~l~~~m~~~~~~~p~ 157 (176)
.-+...|..+-.++.+.|++++|+..|+++.+.. +-+...|+.+-..+.+ .|..++| ++.|++..+.... +
T Consensus 197 P~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~-P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~--~ 273 (382)
T 2h6f_A 197 AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKED-VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPH--N 273 (382)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTT--C
T ss_pred ccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCC--C
Confidence 3467889999999999999999999999998765 3477889999999999 6666777 5888888876665 6
Q ss_pred hHHHHHHHHHhhccc
Q 036589 158 GLCSNLKIIMNDSQV 172 (176)
Q Consensus 158 ~~t~~~li~~~~~~g 172 (176)
...|..+...+...|
T Consensus 274 ~~a~~~l~~ll~~~g 288 (382)
T 2h6f_A 274 ESAWNYLKGILQDRG 288 (382)
T ss_dssp HHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHccC
Confidence 778888888888766
No 80
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=1.6e-06 Score=55.62 Aligned_cols=115 Identities=10% Similarity=-0.064 Sum_probs=94.3
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc----hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHh
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE----EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVK 123 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~ 123 (176)
+.+...+..+...+...|++++|...|++..+. .|+ ...+..+..+|...|++++|+..|++..+.. +.+..
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~ 100 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGL---DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGDVK 100 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCCHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccCHH
Confidence 457888999999999999999999999999865 344 6788889999999999999999999887643 33677
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHh
Q 036589 124 SLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMN 168 (176)
Q Consensus 124 ~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~ 168 (176)
.+..+..++...|++++|.+.|++..+.... +...+..+....
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~ 143 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEPK--NKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Confidence 8888999999999999999999999876543 455555554443
No 81
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.76 E-value=2.9e-07 Score=66.71 Aligned_cols=153 Identities=11% Similarity=0.003 Sum_probs=112.5
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcH----HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc-
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNL----LHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE- 86 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~----~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~- 86 (176)
.+..+.+.|++++|..+++.. ... ....|+. ..|..+...+...+++++|...|++......-..+
T Consensus 81 ~i~~~~~~~~y~~a~~~~~~~-l~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 151 (293)
T 3u3w_A 81 QVIMLCKQKRYKEIYNKVWNE-LKK--------EEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-HTT--------CCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT
T ss_pred HHHHHHHHhhHHHHHHHHHHH-hcc--------ccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH
Confidence 467788899999999999997 332 2333442 23445677777888999999999999874112223
Q ss_pred ---hHHHHHHHHHHHhccCHHHHHHHHHhccc----C-CCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc----cc
Q 036589 87 ---EIIFCNVISFYGRARLLEHALQVFDEMPS----F-NVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLK----AI 153 (176)
Q Consensus 87 ---~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~-~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~----~~ 153 (176)
..+++.+..+|...|++++|+..|++..+ . +..+ ...+++.+...|.+.|++++|.+.+++..+. +.
T Consensus 152 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~ 231 (293)
T 3u3w_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS 231 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCc
Confidence 33689999999999999999999998873 1 2222 2347889999999999999999999987643 22
Q ss_pred cccchHHHHHHHHHhhcccc
Q 036589 154 AVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 154 ~~p~~~t~~~li~~~~~~g~ 173 (176)
...-..+|..+-.+|.+.|+
T Consensus 232 ~~~~~~~~~~lg~~~~~~g~ 251 (293)
T 3u3w_A 232 MALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp CTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 20126788888888888774
No 82
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.75 E-value=6.9e-07 Score=69.95 Aligned_cols=152 Identities=11% Similarity=-0.002 Sum_probs=106.6
Q ss_pred CCHHHHHHHHHh-------ccChh-------HHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHH
Q 036589 7 TSPFRLASLLHL-------QKHPK-------LALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQ 72 (176)
Q Consensus 7 ~~~~~l~~~~~~-------~~~~~-------~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~ 72 (176)
..|......+.+ .|+++ +|..+|++..... .+-+...|..++..+.+.|++++|..
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~----------~p~~~~l~~~~~~~~~~~g~~~~A~~ 342 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL----------LKKNMLLYFAYADYEESRMKYEKVHS 342 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT----------CSSCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh----------CcccHHHHHHHHHHHHhcCCHHHHHH
Confidence 345566666665 68987 8999999983211 12368889999999999999999999
Q ss_pred HHHHHhhcCCCCCc--hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHH-HHHhcCcHHHHHHHHHHHH
Q 036589 73 ILHQLKHDTRVIPE--EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLN-ALLTCGKLDRMKELFISFN 149 (176)
Q Consensus 73 ~~~~m~~~~g~~~~--~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~-~~~~~g~~~~a~~l~~~m~ 149 (176)
+|++..+. .|+ ...|...+..+.+.|++++|.++|++..+.. +.+...|..... .+...|+.++|..+|+...
T Consensus 343 ~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~-~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al 418 (530)
T 2ooe_A 343 IYNRLLAI---EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAALMEYYCSKDKSVAFKIFELGL 418 (530)
T ss_dssp HHHHHHHS---SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-TCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHhCc---cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHcCChhHHHHHHHHHH
Confidence 99999976 343 3578888888888999999999998887542 112222222111 1235788888888888776
Q ss_pred hccccccchHHHHHHHHHhhccccC
Q 036589 150 LKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 150 ~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
+.... +...|..++..+.+.|+.
T Consensus 419 ~~~p~--~~~~~~~~~~~~~~~g~~ 441 (530)
T 2ooe_A 419 KKYGD--IPEYVLAYIDYLSHLNED 441 (530)
T ss_dssp HHHTT--CHHHHHHHHHHHTTTTCH
T ss_pred HHCCC--CHHHHHHHHHHHHhCCCH
Confidence 65432 567777777777776654
No 83
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.74 E-value=7.7e-07 Score=56.02 Aligned_cols=100 Identities=7% Similarity=-0.033 Sum_probs=86.5
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...|......+.+.|++++|...|++..+.. ..+...|..+..+|.+.|++++|+..|++..+.. +.+...|..+-
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg 79 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA--PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKA 79 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHH
Confidence 45678888899999999999999999998762 3457888999999999999999999999988654 34577889999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhcc
Q 036589 130 NALLTCGKLDRMKELFISFNLKA 152 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~ 152 (176)
.++...|++++|.+.|++..+..
T Consensus 80 ~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 80 TAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHhC
Confidence 99999999999999999988765
No 84
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.73 E-value=2.9e-07 Score=60.58 Aligned_cols=102 Identities=8% Similarity=-0.034 Sum_probs=88.3
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...+..+...+.+.|++++|...|++..... +-+...|..+-.+|.+.|++++|+..|++..+.. +-+...|..+-
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~-P~~~~~~~~lg 111 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD--FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG-KNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-SSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-CCCcHHHHHHH
Confidence 56678889999999999999999999999772 3456788889999999999999999999998654 33678889999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
.+|.+.|++++|.+.|++..+....
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999876443
No 85
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.72 E-value=8e-07 Score=58.07 Aligned_cols=109 Identities=7% Similarity=-0.017 Sum_probs=89.3
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...+..+...+.+.|++++|...|+...... ..+...|..+-.+|...|++++|+..|++..+.. +.+...+..+-
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg 96 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD--HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD-IXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC--cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCchHHHHHH
Confidence 56678888899999999999999999998762 3467778889999999999999999999988654 34677888899
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccchHHH
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDGLCS 161 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~ 161 (176)
.+|...|++++|.+.|+...+.....|+...+
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 128 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXPEFXEL 128 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCCcchHH
Confidence 99999999999999999987654332444333
No 86
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.72 E-value=4.7e-07 Score=59.27 Aligned_cols=119 Identities=12% Similarity=-0.015 Sum_probs=93.8
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
....|..+...+...|++++|...|++..+. ...+...+..+..++...|++++|+..|++..+.. +.+...|..+.
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a 88 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIEL--NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHH
Confidence 4556888888999999999999999999876 23357788889999999999999999999988653 34677888999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccccccchHHH--HHHHHHhhcccc
Q 036589 130 NALLTCGKLDRMKELFISFNLKAIAVLDGLCS--NLKIIMNDSQVR 173 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~--~~li~~~~~~g~ 173 (176)
..+...|++++|.+.|++..+.... +...+ -.+...+.+.|+
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~--~~~~~~~~~~~~~~~~~~~ 132 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPH--DKDAKMKYQECNKIVKQKA 132 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876554 33344 333333544444
No 87
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.72 E-value=2e-07 Score=64.96 Aligned_cols=158 Identities=6% Similarity=-0.128 Sum_probs=111.2
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+...+.+.|++++|+..|+++.... +.-+.....+..+..++.+.|++++|...|+++.+...-.+..
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~--------p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~ 77 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRY--------PFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI 77 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH
Confidence 34556678889999999999999983221 1212235678889999999999999999999998763222221
Q ss_pred -HHHHHHHHHHHh------------------ccCHHHHHHHHHhcccCCCCccHh-HH-----------------HHHHH
Q 036589 88 -IIFCNVISFYGR------------------ARLLEHALQVFDEMPSFNVQRTVK-SL-----------------NTLLN 130 (176)
Q Consensus 88 -~~~~~li~~~~~------------------~g~~~~a~~~~~~m~~~~~~p~~~-~~-----------------~~ll~ 130 (176)
..+..+..++.+ .|++++|+..|+++.+.- |+.. .+ -.+..
T Consensus 78 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--P~~~~a~~a~~~l~~~~~~~~~~~~~~a~ 155 (225)
T 2yhc_A 78 DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY--PNSQYTTDATKRLVFLKDRLAKYEYSVAE 155 (225)
T ss_dssp HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC--TTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC--cCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233334444443 578999999999998643 4332 22 23456
Q ss_pred HHHhcCcHHHHHHHHHHHHhcccccc-chHHHHHHHHHhhccccCC
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIAVL-DGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~~p-~~~t~~~li~~~~~~g~~~ 175 (176)
.|.+.|++++|...|+++.+.....| ....+..+..+|.+.|+.+
T Consensus 156 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 156 YYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 78899999999999999987644311 2367888888998888764
No 88
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.72 E-value=5.9e-08 Score=63.64 Aligned_cols=115 Identities=9% Similarity=-0.118 Sum_probs=91.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC
Q 036589 57 IITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG 136 (176)
Q Consensus 57 li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g 136 (176)
|...+...|++++|...++..... .+-+...+-.+-..|.+.|++++|++.|++..+.. +-+...|..+-..|.+.|
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~--~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPS--PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-ERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCS--HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHcChHHHHHHHHHHhccc--CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcC
Confidence 334455678899999999887755 12234455678999999999999999999988654 347788999999999999
Q ss_pred cHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCCC
Q 036589 137 KLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVTG 176 (176)
Q Consensus 137 ~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~~ 176 (176)
++++|...|++..+.... +...|..+-..|.+.|++++
T Consensus 80 ~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~~~~~~~ 117 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPT--QKDLVLKIAELLCKNDVTDG 117 (150)
T ss_dssp CHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHCSSSS
T ss_pred chHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCChHH
Confidence 999999999999887665 67889999999999988753
No 89
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.71 E-value=9.1e-08 Score=63.97 Aligned_cols=125 Identities=11% Similarity=0.083 Sum_probs=96.9
Q ss_pred HHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHH
Q 036589 16 LHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVIS 95 (176)
Q Consensus 16 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~ 95 (176)
+...|++++|+..|+..... .+.+...|..+..+|...|++++|...|++..+.. ..+...+..+..
T Consensus 20 ~~~~~~~~~A~~~~~~al~~-----------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~la~ 86 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA-----------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR--GENAELYAALAT 86 (177)
T ss_dssp CC-----CCCCHHHHHHHHH-----------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--CSCHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh-----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHH
Confidence 45578888898888876221 12367889999999999999999999999998762 235667777888
Q ss_pred H-HHhccCH--HHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 96 F-YGRARLL--EHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 96 ~-~~~~g~~--~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
+ |...|++ ++|+..|++..+.. +.+...+..+...|...|++++|...|++..+....
T Consensus 87 ~l~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 87 VLYYQASQHMTAQTRAMIDKALALD-SNEITALMLLASDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHhcCCcchHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Confidence 8 7789998 99999999988654 335678888899999999999999999998876554
No 90
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.71 E-value=2.2e-07 Score=57.63 Aligned_cols=113 Identities=11% Similarity=0.062 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+.+.|++++|.+.|+++ ... .+.+...+..+...+.+.|++++|...++++.+. . ..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~-~~~ 76 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKA-LEL----------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-D-PNN 76 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH-HHH----------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-C-Ccc
Confidence 46777888999999999999999997 221 1236788999999999999999999999999876 2 345
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHH
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALL 133 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 133 (176)
..++..+...|...|++++|...|+++.+.. +.+...+..+-..+.
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 77 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHH
Confidence 6788889999999999999999999987543 224444444444443
No 91
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.70 E-value=4.5e-07 Score=56.77 Aligned_cols=116 Identities=9% Similarity=-0.028 Sum_probs=92.2
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCC--Ccc----Hh
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNV--QRT----VK 123 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~--~p~----~~ 123 (176)
....|..+...+...|++++|...|++.... . ..+...+..+...|...|++++|+..|++..+..- .++ ..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL-D-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-C-CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 3567888999999999999999999999876 2 34567788899999999999999999998875431 122 67
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhc
Q 036589 124 SLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 124 ~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~ 170 (176)
.+..+...+.+.|++++|.+.|++..+.. |+...+..+-.....
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~---~~~~~~~~l~~~~~~ 124 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEH---RTPDVLKKCQQAEKI 124 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhC---CCHHHHHHHHHHHHH
Confidence 88889999999999999999999988753 555555555544443
No 92
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.70 E-value=7.2e-08 Score=78.06 Aligned_cols=150 Identities=8% Similarity=-0.092 Sum_probs=115.0
Q ss_pred HhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHH
Q 036589 17 HLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISF 96 (176)
Q Consensus 17 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~ 96 (176)
...|++++|++.|++. ..... .......+.+...|..+..++.+.|++++|.+.|++..+.. .-+...|..+-.+
T Consensus 402 ~~~~~~~~A~~~~~~a-l~~~~--~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~~ 476 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAA-RHGAL--DADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV--GWRWRLVWYRAVA 476 (681)
T ss_dssp TTTCCHHHHHHHHHHH-HTC---------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--CCCHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHh-hhhcc--cccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC--cchHHHHHHHHHH
Confidence 7789999999999987 20000 00001123366788889999999999999999999999762 3356788889999
Q ss_pred HHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 97 YGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 97 ~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
|...|++++|++.|++..+.. +-+...|..+-..|.+.|++++ .+.|++..+.... +...|..+-.+|.+.|+++
T Consensus 477 ~~~~g~~~~A~~~~~~al~l~-P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~--~~~a~~~lg~~~~~~g~~~ 551 (681)
T 2pzi_A 477 ELLTGDYDSATKHFTEVLDTF-PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG--VISAAFGLARARSAEGDRV 551 (681)
T ss_dssp HHHHTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc--hHHHHHHHHHHHHHcCCHH
Confidence 999999999999999988654 2356778888888888999988 8888888876654 6678888888888888764
No 93
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.69 E-value=3.3e-08 Score=80.00 Aligned_cols=151 Identities=8% Similarity=-0.129 Sum_probs=121.2
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
...+..+-..+.+.|++++|++.|++.... .+-+...|..+..++...|++++|.+.|++..+.. .-
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--P~ 499 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAER-----------VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTF--PG 499 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----------HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TT
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhcc-----------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC
Confidence 446777788999999999999999997221 12367899999999999999999999999998762 23
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+...|..+-.+|.+.|++++ ++.|++..+.. +-+...|..+-.++.+.|++++|.+.|++..+.... +...|..+.
T Consensus 500 ~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~--~~~a~~~~~ 575 (681)
T 2pzi_A 500 ELAPKLALAATAELAGNTDE-HKFYQTVWSTN-DGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRH--FTTARLTSA 575 (681)
T ss_dssp CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTT--HHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC-CchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcc--cHHHHHHHH
Confidence 56778889999999999999 99999988654 346778999999999999999999999998776544 567777777
Q ss_pred HHhhcccc
Q 036589 166 IMNDSQVR 173 (176)
Q Consensus 166 ~~~~~~g~ 173 (176)
.++...++
T Consensus 576 ~~~~~~~~ 583 (681)
T 2pzi_A 576 VTLLSGRS 583 (681)
T ss_dssp HHTC----
T ss_pred HHHHccCC
Confidence 77765443
No 94
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.69 E-value=3.8e-07 Score=71.44 Aligned_cols=154 Identities=10% Similarity=0.036 Sum_probs=115.9
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC-c-HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY-N-LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
...|..+...+.+.|++++|..+|+.. ... .| + ...|...+..+.+.|++++|.++|++..+....
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~a-l~~-----------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRL-LAI-----------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHS-----------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHH-hCc-----------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 446788889999999999999999998 221 22 3 358999999999999999999999999976222
Q ss_pred CCchHHHHHHH-HHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccc--hHH
Q 036589 84 IPEEIIFCNVI-SFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLD--GLC 160 (176)
Q Consensus 84 ~~~~~~~~~li-~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~--~~t 160 (176)
+...|.... ..+...|++++|..+|+...+.. +-+...|..++..+.+.|+.++|..+|++..+.+...|+ ...
T Consensus 389 --~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~-p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~l 465 (530)
T 2ooe_A 389 --RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEI 465 (530)
T ss_dssp --CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHH
T ss_pred --chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHC-CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHH
Confidence 222222222 12346899999999999887543 336788999999999999999999999999886432143 457
Q ss_pred HHHHHHHhhccccC
Q 036589 161 SNLKIIMNDSQVRV 174 (176)
Q Consensus 161 ~~~li~~~~~~g~~ 174 (176)
|...+....+.|+.
T Consensus 466 w~~~~~~e~~~G~~ 479 (530)
T 2ooe_A 466 WARFLAFESNIGDL 479 (530)
T ss_dssp HHHHHHHHHHSSCH
T ss_pred HHHHHHHHHHcCCH
Confidence 87777777777764
No 95
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.68 E-value=1.7e-07 Score=59.09 Aligned_cols=116 Identities=4% Similarity=-0.077 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+.+.|++++|...|++. ... .+.+...|..+..++...|++++|...+++..+. . ..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~a-l~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~-~~~ 83 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEA-IKR----------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL-E-PTF 83 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHH-HTT----------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH-HHc----------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-C-CCc
Confidence 35677888899999999999999997 221 1236788999999999999999999999999876 2 335
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG 136 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g 136 (176)
...+..+..+|.+.|++++|++.|++..+.. +.+...+..+...+.+.|
T Consensus 84 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 84 IKGYTRKAAALEAMKDYTKAMDVYQKALDLD-SSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-GGGTHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHhc
Confidence 6788889999999999999999999887543 223455666666665544
No 96
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.68 E-value=1.3e-06 Score=56.33 Aligned_cols=101 Identities=19% Similarity=0.088 Sum_probs=85.5
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...+..+...+.+.|++++|...|++..... +.+...|..+-.+|.+.|++++|+..|+...+.. +.+...+..+-
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg 93 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLD--HYDARYFLGLGACRQSLGLYEQALQSYSYGALMD-INEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCcHHHHHHH
Confidence 55667778888999999999999999998762 3466778889999999999999999999988654 34667788899
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccc
Q 036589 130 NALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
.+|...|++++|.+.|+...+...
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999876544
No 97
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.68 E-value=1.7e-07 Score=68.03 Aligned_cols=161 Identities=7% Similarity=-0.085 Sum_probs=115.0
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC-cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CC-
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY-NLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RV- 83 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~- 83 (176)
|+.....|...|++++|+..|++...-.. ..+.++ ...+|+.+..+|.+.|++++|...|++..+.. |-
T Consensus 40 ~~~a~~~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~ 113 (292)
T 1qqe_A 40 CVQAATIYRLRKELNLAGDSFLKAADYQK------KAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF 113 (292)
T ss_dssp HHHHHHHHHHTTCTHHHHHHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH
Confidence 55566778889999999988887521100 001111 25689999999999999999999999877541 11
Q ss_pred CCchHHHHHHHHHHHhc-cCHHHHHHHHHhcccCC----CCcc-HhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccc
Q 036589 84 IPEEIIFCNVISFYGRA-RLLEHALQVFDEMPSFN----VQRT-VKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLD 157 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~-g~~~~a~~~~~~m~~~~----~~p~-~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~ 157 (176)
..-..+++.+-..|... |++++|+..|++..+.. ..+. ..+++.+...+.+.|++++|.+.|++..+.....+.
T Consensus 114 ~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 11145788899999996 99999999999876421 1111 356888999999999999999999999876544122
Q ss_pred h-----HHHHHHHHHhhccccCC
Q 036589 158 G-----LCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 158 ~-----~t~~~li~~~~~~g~~~ 175 (176)
. ..|..+..++...|+++
T Consensus 194 ~~~~~~~~~~~lg~~~~~~g~~~ 216 (292)
T 1qqe_A 194 SQWSLKDYFLKKGLCQLAATDAV 216 (292)
T ss_dssp TGGGHHHHHHHHHHHHHHTTCHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHH
Confidence 2 15667777777777653
No 98
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.65 E-value=3.1e-07 Score=55.93 Aligned_cols=102 Identities=13% Similarity=-0.038 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc--cHhHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR--TVKSLNT 127 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p--~~~~~~~ 127 (176)
+...|..+...+...|++++|...+++..+. . ..+...+..+..++...|++++|++.|++..+.. +. +...+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~ 81 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQL-D-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVI-EDEYNKDVWAA 81 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHH-C-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-CCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-C-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cccchHHHHHH
Confidence 4556777888899999999999999999876 2 3356778889999999999999999999988653 23 5788899
Q ss_pred HHHHHHhc-CcHHHHHHHHHHHHhcccc
Q 036589 128 LLNALLTC-GKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 128 ll~~~~~~-g~~~~a~~l~~~m~~~~~~ 154 (176)
+...+.+. |++++|.+.|++..+....
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 99999999 9999999999999876554
No 99
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.65 E-value=3.2e-07 Score=57.35 Aligned_cols=118 Identities=6% Similarity=-0.110 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+...|++++|...|++.... .+.+...|..+..++...|++++|...+++..+. . ..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~-~~~ 79 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIEL-----------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI-D-PAY 79 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHc-----------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc-C-ccC
Confidence 35667788889999999999999997222 1236788999999999999999999999999876 2 334
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcH
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKL 138 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~ 138 (176)
...+..+..+|.+.|++++|...|++..+.. +.+...+..+...+.+.|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 80 SKAYGRMGLALSSLNKHVEAVAYYKKALELD-PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHHhcC
Confidence 6778889999999999999999999987653 23566777777777776654
No 100
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.65 E-value=6.1e-07 Score=66.55 Aligned_cols=121 Identities=7% Similarity=-0.058 Sum_probs=101.2
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc--------------hHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE--------------EIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~--------------~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
+...|..+...+.+.|++++|...|++..+. ..... ...|..+..+|.+.|++++|+..|++..+
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~-~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSW-LEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-TTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-hhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567888999999999999999999999876 22211 47889999999999999999999999886
Q ss_pred CCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 116 FNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 116 ~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
.. +.+...|..+-.+|...|++++|.+.|++..+.... +...+..+...+.+.|+.
T Consensus 225 ~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~--~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 225 LD-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN--NKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp HC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS--CHHHHHHHHHHHHHHHHH
T ss_pred hC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHH
Confidence 54 347888999999999999999999999999887654 667788887777776654
No 101
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.64 E-value=3.9e-07 Score=64.72 Aligned_cols=159 Identities=11% Similarity=-0.064 Sum_probs=110.8
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh--------cCChHHHHHHHHHHh
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR--------AKMFDEMQQILHQLK 78 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~--------~g~~~~a~~~~~~m~ 78 (176)
..+..+-..|.+.|++++|+..|+...... +..+.....+..+..++.+ .|++++|...|++..
T Consensus 53 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~--------p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l 124 (261)
T 3qky_A 53 DAQFYLARAYYQNKEYLLAASEYERFIQIY--------QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFI 124 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHC--------CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence 356677788999999999999999983221 2222345678888888888 999999999999999
Q ss_pred hcCCCCCchH-HH--------------HHHHHHHHhccCHHHHHHHHHhcccCCC--CccHhHHHHHHHHHHhc------
Q 036589 79 HDTRVIPEEI-IF--------------CNVISFYGRARLLEHALQVFDEMPSFNV--QRTVKSLNTLLNALLTC------ 135 (176)
Q Consensus 79 ~~~g~~~~~~-~~--------------~~li~~~~~~g~~~~a~~~~~~m~~~~~--~p~~~~~~~ll~~~~~~------ 135 (176)
+...-.+... .. ..+...|.+.|++++|+..|++..+..- ......+..+..+|...
T Consensus 125 ~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~ 204 (261)
T 3qky_A 125 DRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVR 204 (261)
T ss_dssp HHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCG
T ss_pred HHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchh
Confidence 7632112111 11 4567889999999999999999885431 11345677777888766
Q ss_pred ----CcHHHHHHHHHHHHhccccccc-hHHHHHHHHHhhcccc
Q 036589 136 ----GKLDRMKELFISFNLKAIAVLD-GLCSNLKIIMNDSQVR 173 (176)
Q Consensus 136 ----g~~~~a~~l~~~m~~~~~~~p~-~~t~~~li~~~~~~g~ 173 (176)
|++++|...|++..+..+..|. ......+-..+.+.++
T Consensus 205 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~ 247 (261)
T 3qky_A 205 ARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTE 247 (261)
T ss_dssp GGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHH
T ss_pred hcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHH
Confidence 8999999999999876443122 2344444444444443
No 102
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.63 E-value=1.8e-07 Score=63.82 Aligned_cols=149 Identities=11% Similarity=-0.042 Sum_probs=101.6
Q ss_pred HHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc---
Q 036589 10 FRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE--- 86 (176)
Q Consensus 10 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~--- 86 (176)
+.......-.|++++|.+.|+.- .. ........+..+...+.+.|++++|...|++..+...-.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 76 (198)
T 2fbn_A 8 HHHSSGRENLYFQGAKKSIYDYT-DE----------EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDD 76 (198)
T ss_dssp --------------CCCSGGGCC-HH----------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCC
T ss_pred cchhhhhhhhhhccccCchhhCC-HH----------HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccch
Confidence 34445556667777787777654 11 11124556777888889999999999999998875222221
Q ss_pred -----------hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccc
Q 036589 87 -----------EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAV 155 (176)
Q Consensus 87 -----------~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~ 155 (176)
...+..+..+|.+.|++++|+..|+...+.. +.+...+..+-.+|...|++++|.+.|++..+....
T Consensus 77 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~- 154 (198)
T 2fbn_A 77 QILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPN- 154 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-
Confidence 2678889999999999999999999888653 346788888999999999999999999998876544
Q ss_pred cchHHHHHHHHHhhccc
Q 036589 156 LDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 156 p~~~t~~~li~~~~~~g 172 (176)
+...+..+...+...+
T Consensus 155 -~~~~~~~l~~~~~~~~ 170 (198)
T 2fbn_A 155 -NLDIRNSYELCVNKLK 170 (198)
T ss_dssp -CHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHH
Confidence 5666666666665544
No 103
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.63 E-value=4.6e-07 Score=61.41 Aligned_cols=149 Identities=11% Similarity=-0.053 Sum_probs=100.4
Q ss_pred HHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc---CCC-CCchHHHH
Q 036589 16 LHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD---TRV-IPEEIIFC 91 (176)
Q Consensus 16 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~---~g~-~~~~~~~~ 91 (176)
....|++++|.+.++.+ ... + ......+..+...+...|++++|...+++.... .+. ......+.
T Consensus 2 ~~~~g~~~~A~~~~~~~-~~~--------~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 70 (203)
T 3gw4_A 2 AFEAHDYALAERQAQAL-LAH--------P--ATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALH 70 (203)
T ss_dssp -----CHHHHHHHHHHH-HTS--------T--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHh-cCC--------h--HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 34678999999933333 110 1 126778888999999999999999999887762 112 23446777
Q ss_pred HHHHHHHhccCHHHHHHHHHhcccC----CCC--ccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc----cccccchHHH
Q 036589 92 NVISFYGRARLLEHALQVFDEMPSF----NVQ--RTVKSLNTLLNALLTCGKLDRMKELFISFNLK----AIAVLDGLCS 161 (176)
Q Consensus 92 ~li~~~~~~g~~~~a~~~~~~m~~~----~~~--p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~----~~~~p~~~t~ 161 (176)
.+...|...|++++|...|++..+. +-. .....++.+-..+...|++++|.+.+++..+. +....-..++
T Consensus 71 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 150 (203)
T 3gw4_A 71 QVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAF 150 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 8888999999999999998876542 211 12455778888889999999999999887642 2110223456
Q ss_pred HHHHHHhhccccCC
Q 036589 162 NLKIIMNDSQVRVT 175 (176)
Q Consensus 162 ~~li~~~~~~g~~~ 175 (176)
..+-..|...|+++
T Consensus 151 ~~la~~~~~~g~~~ 164 (203)
T 3gw4_A 151 RGLGDLAQQEKNLL 164 (203)
T ss_dssp HHHHHHHHHTTCHH
T ss_pred HHHHHHHHHCcCHH
Confidence 77777787777754
No 104
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.63 E-value=1.2e-06 Score=60.01 Aligned_cols=119 Identities=8% Similarity=-0.074 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
...+..+...+...|++++|...|++.. .|+...+..+..+|.+.|++++|+..|++..+.. +.+...|..+..
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~-----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~lg~ 79 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQ-----DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSS-----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHc-----CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHH
Confidence 4456667888889999999999998774 4577899999999999999999999999988654 346788999999
Q ss_pred HHHhcCcHHHHHHHHHHHHhcccccc--------------chHHHHHHHHHhhccccCC
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIAVL--------------DGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~~p--------------~~~t~~~li~~~~~~g~~~ 175 (176)
.|...|++++|.+.|++..+.....+ ....+..+-.+|...|+++
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 138 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWK 138 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHH
Confidence 99999999999999999987543201 3377888888888888764
No 105
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.62 E-value=1.8e-06 Score=54.80 Aligned_cols=101 Identities=12% Similarity=-0.011 Sum_probs=87.7
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHH
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNT 127 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ 127 (176)
+.+...|..+...+.+.|++++|...|+..... . ..+...|..+..+|...|++++|+..|++..+.. +.+...+..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~ 82 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITR-N-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFF 82 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh-C-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-chhHHHHHH
Confidence 347888999999999999999999999998876 2 3356788899999999999999999999988654 346788999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 128 LLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 128 ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
+..++...|++++|.+.|++..+.
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999998754
No 106
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.62 E-value=3.2e-07 Score=68.09 Aligned_cols=131 Identities=10% Similarity=-0.089 Sum_probs=104.5
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCC---CC---------cHHHHHHHHHHHHhcCChHHHHHHHH
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPF---RY---------NLLHYDLIITKLGRAKMFDEMQQILH 75 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~y~~li~~~~~~g~~~~a~~~~~ 75 (176)
.+..+-..|.+.|++++|+..|++..... +.. .. ....|..+..++.+.|++++|...++
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~--------p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWL--------EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHT--------TTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHh--------hccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46667788899999999999999872211 110 00 05789999999999999999999999
Q ss_pred HHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHH-HHHHHHHH
Q 036589 76 QLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRM-KELFISFN 149 (176)
Q Consensus 76 ~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a-~~l~~~m~ 149 (176)
+..+. . ..+...|..+..+|...|++++|+..|++..+.. +-+...+..+...+.+.|+.++| ..+|+.|.
T Consensus 221 ~al~~-~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 221 KALEL-D-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY-PNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-C-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 2 3467788899999999999999999999988654 33677888899999999999988 45666664
No 107
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.60 E-value=7.8e-07 Score=66.63 Aligned_cols=157 Identities=10% Similarity=-0.072 Sum_probs=115.0
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC-cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-----CC
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY-NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV-----IP 85 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~-----~~ 85 (176)
.-..+...|++++|+..|++...-.. ..+..+ ....|..+...|...|++++|...+++..+...- ..
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 182 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLI------FVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIR 182 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGG------GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHh------hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHH
Confidence 33456778999999999998722110 001111 4567889999999999999999999987754111 11
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCC-ccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh-----ccccc
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQ-RTVKSLNTLLNALLTCGKLDRMKELFISFNL-----KAIAV 155 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~-p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~-----~~~~~ 155 (176)
...+++.+-..|...|++++|+..|++..+. +-. ....+++.+-..|...|++++|.+.|++..+ ...+
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~- 261 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP- 261 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG-
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch-
Confidence 2457888899999999999999999887632 111 1224788899999999999999999999876 3324
Q ss_pred cchHHHHHHHHHhhccccCC
Q 036589 156 LDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 156 p~~~t~~~li~~~~~~g~~~ 175 (176)
....++..+-..|.+.|+++
T Consensus 262 ~~~~~~~~l~~~~~~~g~~~ 281 (383)
T 3ulq_A 262 SLPQAYFLITQIHYKLGKID 281 (383)
T ss_dssp GHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHCCCHH
Confidence 46778888889988888764
No 108
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.58 E-value=3e-06 Score=61.30 Aligned_cols=158 Identities=11% Similarity=-0.013 Sum_probs=112.5
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc----HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN----LLHYDLIITKLGRAKMFDEMQQILHQLKHDTR-- 82 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~----~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g-- 82 (176)
+...+..+...|++++|.+.++...... ...++ ...+..+...+...|++++|...+++..+...
T Consensus 78 l~~~~~~~~~~~~y~~A~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 148 (293)
T 2qfc_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKE---------EYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG 148 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC---------CCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhccc---------cCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC
Confidence 3455777889999999999998652221 11111 23344566677788999999999999875411
Q ss_pred CCC--chHHHHHHHHHHHhccCHHHHHHHHHhccc----CCCCc--cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc-
Q 036589 83 VIP--EEIIFCNVISFYGRARLLEHALQVFDEMPS----FNVQR--TVKSLNTLLNALLTCGKLDRMKELFISFNLKAI- 153 (176)
Q Consensus 83 ~~~--~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~p--~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~- 153 (176)
..+ ...+++.+...|...|++++|+..|++..+ .+-.+ ...+++.+...|.+.|++++|.+.+++..+...
T Consensus 149 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 149 IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 111 145888999999999999999999998762 11111 226889999999999999999999998764321
Q ss_pred ---cccchHHHHHHHHHhhccccCC
Q 036589 154 ---AVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 154 ---~~p~~~t~~~li~~~~~~g~~~ 175 (176)
...-..+|..+-..|.+.|+.+
T Consensus 229 ~~~~~~~~~~~~~lg~~y~~~g~~~ 253 (293)
T 2qfc_A 229 INSMALIGQLYYQRGECLRKLEYEE 253 (293)
T ss_dssp TTBCSSHHHHHHHHHHHHHHTTCCH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCcH
Confidence 1012678888888888888764
No 109
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.57 E-value=3.5e-07 Score=55.69 Aligned_cols=105 Identities=7% Similarity=-0.110 Sum_probs=86.3
Q ss_pred CCCCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 036589 2 NKAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT 81 (176)
Q Consensus 2 ~~p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~ 81 (176)
...+...+..+...+.+.|++++|...|++.. .. .+.+...|..+..++...|++++|...+++..+..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~-~~----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 70 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAI-QL----------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVI 70 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHH-HH----------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHH-Hh----------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 44566788889999999999999999999872 21 12367788999999999999999999999999762
Q ss_pred CCCCchHHHHHHHHHHHhc-cCHHHHHHHHHhcccCC
Q 036589 82 RVIPEEIIFCNVISFYGRA-RLLEHALQVFDEMPSFN 117 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~-g~~~~a~~~~~~m~~~~ 117 (176)
.-..+...+..+..+|.+. |++++|++.|+...+..
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 71 EDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp CCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGC
T ss_pred cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcc
Confidence 1111577888899999999 99999999999988654
No 110
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.56 E-value=2.2e-07 Score=58.04 Aligned_cols=106 Identities=8% Similarity=-0.085 Sum_probs=81.7
Q ss_pred hcCChHHHHHHHHHHhhcCC--CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHH
Q 036589 63 RAKMFDEMQQILHQLKHDTR--VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDR 140 (176)
Q Consensus 63 ~~g~~~~a~~~~~~m~~~~g--~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~ 140 (176)
..|++++|...|++..+. + -+-+...+..+..+|.+.|++++|+..|++..+.. +-+...+..+..++.+.|++++
T Consensus 2 ~~g~~~~A~~~~~~al~~-~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF-PNHQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHHHSS-CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHHHHc-CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHcCCHHH
Confidence 468899999999999876 3 13345778889999999999999999999988654 3357788889999999999999
Q ss_pred HHHHHHHHHhccccccchHHHHHHHHHhhc
Q 036589 141 MKELFISFNLKAIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 141 a~~l~~~m~~~~~~~p~~~t~~~li~~~~~ 170 (176)
|.+.|++..+.....|+...|...+..|..
T Consensus 80 A~~~~~~al~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 80 GVELLLKIIAETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHHHHHHHHHHHCCCHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 999999988765543667777777776654
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.56 E-value=3.6e-06 Score=56.21 Aligned_cols=131 Identities=16% Similarity=0.083 Sum_probs=95.9
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH-HHhcCChHHHHHHHHHHhhcCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITK-LGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~-~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
+..+..+-..+.+.|++++|+..|+.. ... .|+...+...... +.+.+...+|...+++..+.. +
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a-~~~-----------~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~--P 105 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATI-PLE-----------YQDNSYKSLIAKLELHQQAAESPELKRLEQELAAN--P 105 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTC-CGG-----------GCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHS--T
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHh-hhc-----------cCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhC--C
Confidence 345777888999999999999999998 332 2233333322211 223233445788888888651 2
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
-+...+..+..++...|++++|+..|++..+..-.+ +...+..+...+...|+.++|...|++...
T Consensus 106 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 106 DNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 346788889999999999999999999998664222 356889999999999999999999988654
No 112
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.55 E-value=1.4e-06 Score=55.39 Aligned_cols=109 Identities=10% Similarity=0.018 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC--CCcc----HhH
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN--VQRT----VKS 124 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~--~~p~----~~~ 124 (176)
...+..+...+.+.|++++|...|++..+. . +-+...|+.+-.+|.+.|++++|++.|++..+.. ..++ ..+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~-~-p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIEL-D-PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHH
Confidence 456888999999999999999999999876 2 3356788899999999999999999999887432 1111 246
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHH
Q 036589 125 LNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLK 164 (176)
Q Consensus 125 ~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~l 164 (176)
|..+-..+...|++++|++.|++..+.. ||..+...|
T Consensus 86 ~~~lg~~~~~~~~~~~A~~~~~kal~~~---~~~~~~~~l 122 (127)
T 4gcn_A 86 MSRAGNAFQKQNDLSLAVQWFHRSLSEF---RDPELVKKV 122 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS---CCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhC---cCHHHHHHH
Confidence 7778888999999999999999977643 555444433
No 113
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.54 E-value=7.6e-07 Score=64.55 Aligned_cols=139 Identities=6% Similarity=-0.073 Sum_probs=102.8
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCC-CCCcHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcC---
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKP-FRYNLLHYDLIITKLGRA-KMFDEMQQILHQLKHDT--- 81 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~-~~~~~~~y~~li~~~~~~-g~~~~a~~~~~~m~~~~--- 81 (176)
.+|+.+-..|.+.|++++|+..|++...-.. ..+ ...-..+|+.+...|... |++++|...|++..+..
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~------~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~ 151 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFT------HRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH------HcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC
Confidence 3677888899999999999998887621100 001 011245788899999996 99999999999987641
Q ss_pred CCCCc-hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccH------hHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 82 RVIPE-EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTV------KSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 82 g~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~------~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
+-... ..+++.+...|.+.|++++|+..|++..+....... ..|..+..++...|++++|...|++..+.
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 152 QSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 11111 356888999999999999999999998864422221 15677888899999999999999997753
No 114
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.54 E-value=2e-06 Score=59.19 Aligned_cols=115 Identities=8% Similarity=-0.036 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc-hHHHHH----------------HHHHHHhccCHHHHHHHHHhc
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE-EIIFCN----------------VISFYGRARLLEHALQVFDEM 113 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~-~~~~~~----------------li~~~~~~g~~~~a~~~~~~m 113 (176)
...+-.....+...|++++|...|++..+. .|+ ...|.. +..+|.+.|++++|+..|++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 80 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL---NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKEL 80 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 334444556677899999999999998875 233 344555 888899999999999999988
Q ss_pred ccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcc
Q 036589 114 PSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 114 ~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~ 171 (176)
.+.. +-+...+..+-..+...|++++|.+.|++..+..+. +..+|..+-..|...
T Consensus 81 l~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~--~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 81 LQKA-PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD--NLAANIFLGNYYYLT 135 (208)
T ss_dssp HHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHH
T ss_pred HHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHH
Confidence 8654 336788888999999999999999999999887664 566777766665443
No 115
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.53 E-value=5.1e-06 Score=60.11 Aligned_cols=137 Identities=11% Similarity=-0.078 Sum_probs=102.7
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc--hHH
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE--EII 89 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~--~~~ 89 (176)
....+...|++++|.++|+.+ ... .|+......+...+.+.+++++|+..|+...+. . .|. ...
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~-~~~-----------~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~-~-d~~~~~~a 173 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAA-PVA-----------GSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKW-P-DKFLAGAA 173 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSS-CCT-----------TCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGC-S-CHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHH-Hhc-----------CCchHHHHHHHHHHHHcCCHHHHHHHHHHhhcc-C-CcccHHHH
Confidence 467788899999999999999 332 233335566667889999999999999865544 1 221 335
Q ss_pred HHHHHHHHHhccCHHHHHHHHHhcccCCCCcc--HhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 90 FCNVISFYGRARLLEHALQVFDEMPSFNVQRT--VKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 90 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~--~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+..+-.++...|++++|+..|++..+....|. .......-.++.+.|+.++|..+|+++.... |+...+..|.
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~---P~~~~~~aL~ 248 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTH---PEPKVAAALK 248 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS---CCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CcHHHHHHHh
Confidence 66788999999999999999999875433253 3466777788899999999999999998753 5545555443
No 116
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.53 E-value=1.4e-06 Score=65.30 Aligned_cols=155 Identities=10% Similarity=-0.127 Sum_probs=112.3
Q ss_pred HHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC----CC-CchH
Q 036589 14 SLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR----VI-PEEI 88 (176)
Q Consensus 14 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g----~~-~~~~ 88 (176)
..+...|++++|+..|++...-.. ...........|..+..+|...|+++.|...+++..+... .. ....
T Consensus 109 ~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 183 (378)
T 3q15_A 109 MYEFDQKEYVEAIGYYREAEKELP-----FVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQ 183 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTGG-----GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHh-----hCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 345678999999999988722110 0011112355788899999999999999999988765311 11 1356
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccC----CCC-ccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh-----ccccccch
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSF----NVQ-RTVKSLNTLLNALLTCGKLDRMKELFISFNL-----KAIAVLDG 158 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~-p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~-----~~~~~p~~ 158 (176)
+++.+-.+|...|++++|++.|++..+. +-. ....+++.+-..|...|++++|.+.|.+..+ ... ...
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--~~~ 261 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD--LLP 261 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG--GHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh--hHH
Confidence 7788999999999999999999877642 211 1245688888999999999999999998876 333 347
Q ss_pred HHHHHHHHHhhccccCC
Q 036589 159 LCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 159 ~t~~~li~~~~~~g~~~ 175 (176)
.++..+-..|.+.|+++
T Consensus 262 ~~~~~la~~~~~~g~~~ 278 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQ 278 (378)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHCCCHH
Confidence 78888888888888764
No 117
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.52 E-value=3.8e-07 Score=62.86 Aligned_cols=109 Identities=9% Similarity=0.005 Sum_probs=82.9
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHH----------------HHHHHHhcCChHHHHHHHH
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDL----------------IITKLGRAKMFDEMQQILH 75 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~----------------li~~~~~~g~~~~a~~~~~ 75 (176)
.-..+.+.|++++|+..|++.... .+-+...|.. +..++.+.|++++|...|+
T Consensus 10 ~g~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 10 KVSAAIEAGQNGQAVSYFRQTIAL-----------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHh-----------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 345677899999999999997221 1124556666 8899999999999999999
Q ss_pred HHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh
Q 036589 76 QLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT 134 (176)
Q Consensus 76 ~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 134 (176)
+..+.. +-+...+..+..+|...|++++|+..|++..+.. +-+...|..+-..|..
T Consensus 79 ~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~ 134 (208)
T 3urz_A 79 ELLQKA--PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLE-ADNLAANIFLGNYYYL 134 (208)
T ss_dssp HHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 999762 3356788889999999999999999999988654 2345566655555533
No 118
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.50 E-value=3.1e-07 Score=71.57 Aligned_cols=135 Identities=6% Similarity=-0.059 Sum_probs=97.9
Q ss_pred HHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CC--CCCch
Q 036589 14 SLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD----TR--VIPEE 87 (176)
Q Consensus 14 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~----~g--~~~~~ 87 (176)
..+...|++++|..++++........ ..+..+....+++.|...|...|++++|+.++++..+. .| ..-..
T Consensus 317 ~~~~~qg~~~eA~~l~~~aL~~~~~~---lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 317 DKARSEGLYHEVVKLCRECLEKQEPV---FADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHTTT---BCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 34667899999988876642111000 01222335678999999999999999999998886643 12 33345
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhccc-----CC--CCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPS-----FN--VQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~-----~~--~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
.+++.|...|...|++++|+.+|++..+ .| .+.+..+.+.+-.++...+.+++|+.+|..+++.
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999998887653 33 2223455666667888899999999999999763
No 119
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.48 E-value=3.5e-06 Score=60.96 Aligned_cols=132 Identities=8% Similarity=-0.037 Sum_probs=97.2
Q ss_pred HHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC--cHHHHHHHHHHHHhcCChHHHHHHHHHHhh---cCCCCC
Q 036589 11 RLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY--NLLHYDLIITKLGRAKMFDEMQQILHQLKH---DTRVIP 85 (176)
Q Consensus 11 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~--~~~~y~~li~~~~~~g~~~~a~~~~~~m~~---~~g~~~ 85 (176)
.+...+...|++++|+..|++...... ....+ ...+|+.+...|...|++++|...|++..+ ..+-.+
T Consensus 120 ~~~~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~ 192 (293)
T 2qfc_A 120 YVAAYVLKKVDYEYCILELKKLLNQQL-------TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNE 192 (293)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHTTCC-------CSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHh-------cCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccc
Confidence 355667788999999999887522110 11111 255899999999999999999999999873 212122
Q ss_pred --chHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCc-cHhHHHHHHHHHHhcCcHHHH-HHHHHHHH
Q 036589 86 --EEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQR-TVKSLNTLLNALLTCGKLDRM-KELFISFN 149 (176)
Q Consensus 86 --~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p-~~~~~~~ll~~~~~~g~~~~a-~~l~~~m~ 149 (176)
...+++.+..+|.+.|++++|+..|++..+. +... -..+|..+-..|.+.|++++| ...|++..
T Consensus 193 ~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 193 EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 2258889999999999999999999987632 1111 267788899999999999999 77777654
No 120
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.48 E-value=5.3e-07 Score=67.58 Aligned_cols=160 Identities=8% Similarity=-0.087 Sum_probs=104.6
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCC
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD----TRV 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~----~g~ 83 (176)
+++.+-..|...|++++|+..|++...-.. ..........+|..+..+|...|++++|.+.+++..+. ...
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~ 260 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAE-----AEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNIL 260 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-----HcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccc
Confidence 456677788888999998888877621100 00001112347788888888999999999888887762 021
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCccHhHHHHHHHHHHhcCc---HHHHHHHHHHHHhcccccc
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQRTVKSLNTLLNALLTCGK---LDRMKELFISFNLKAIAVL 156 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p~~~~~~~ll~~~~~~g~---~~~a~~l~~~m~~~~~~~p 156 (176)
.....++..+...|.+.|++++|...|++..+. +-......++.+-..+...|+ +++|..++++.. ..+ .
T Consensus 261 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~--~~~-~ 337 (383)
T 3ulq_A 261 PSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESKM--LYA-D 337 (383)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHTT--CHH-H
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCc--CHH-H
Confidence 334567788888889999999998888876532 111223335666677777787 777777776652 222 3
Q ss_pred chHHHHHHHHHhhccccCC
Q 036589 157 DGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 157 ~~~t~~~li~~~~~~g~~~ 175 (176)
....+..+-..|...|+++
T Consensus 338 ~~~~~~~la~~y~~~g~~~ 356 (383)
T 3ulq_A 338 LEDFAIDVAKYYHERKNFQ 356 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHH
Confidence 3456677777887777654
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.47 E-value=1.8e-06 Score=56.71 Aligned_cols=100 Identities=9% Similarity=-0.099 Sum_probs=83.3
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+-..+.+.|++++|+..|+... .. .+-+...|..+..+|.+.|++++|...|++..+.. +-+.
T Consensus 38 ~~~~lg~~~~~~g~~~eA~~~~~~al-~~----------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~--P~~~ 104 (151)
T 3gyz_A 38 DIYSYAYDFYNKGRIEEAEVFFRFLC-IY----------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG--KNDY 104 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--SSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC--CCCc
Confidence 46667788899999999999999982 21 13378899999999999999999999999999772 2356
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccH
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTV 122 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~ 122 (176)
..|..+-.+|.+.|++++|+..|++..+.. |+.
T Consensus 105 ~~~~~lg~~~~~lg~~~eA~~~~~~al~l~--~~~ 137 (151)
T 3gyz_A 105 TPVFHTGQCQLRLKAPLKAKECFELVIQHS--NDE 137 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCH
Confidence 678889999999999999999999988653 554
No 122
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=2.4e-06 Score=54.70 Aligned_cols=97 Identities=7% Similarity=-0.090 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc----HHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN----LLHYDLIITKLGRAKMFDEMQQILHQLKHDT 81 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~----~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~ 81 (176)
...+..+...+.+.|++++|++.|++. ... .|+ ...|..+..++...|++++|...+++..+.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a-~~~-----------~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~- 94 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQA-LGL-----------DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK- 94 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHH-HTS-----------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH-HHH-----------cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh-
Confidence 345677788899999999999999997 221 234 678888999999999999999999998876
Q ss_pred CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 82 RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
. ..+...+..+..+|...|++++|...|++..+.
T Consensus 95 ~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 95 D-GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp T-SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred C-ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 2 235677888999999999999999999988754
No 123
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.44 E-value=2.2e-06 Score=54.41 Aligned_cols=96 Identities=7% Similarity=-0.055 Sum_probs=80.3
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchH
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEI 88 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~ 88 (176)
+...=..|.+.|++++|++.|++.... .+.+...|..+..++.+.|++++|...|++..+. . ..+..
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~-p~~~~ 82 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVKR-----------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL-D-SKFIK 82 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh-h-hhhhH
Confidence 455667889999999999999997222 1337889999999999999999999999999876 2 33567
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccCC
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSFN 117 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 117 (176)
.|..+..+|...|++++|++.|++..+..
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 88889999999999999999999988643
No 124
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.44 E-value=2.1e-05 Score=49.22 Aligned_cols=97 Identities=12% Similarity=-0.027 Sum_probs=77.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHhhcCCCCC-chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc----HhHHHHHH
Q 036589 55 DLIITKLGRAKMFDEMQQILHQLKHDTRVIP-EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT----VKSLNTLL 129 (176)
Q Consensus 55 ~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~----~~~~~~ll 129 (176)
..+...+...|++++|...|+...+...-.+ ....+..+..+|.+.|++++|+..|+...+.. |+ ...+..+.
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~~~~la 83 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY--PTHDKAAGGLLKLG 83 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTSTTHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC--CCCcccHHHHHHHH
Confidence 3466778899999999999999987621111 11467778899999999999999999988643 33 56678888
Q ss_pred HHHHhcCcHHHHHHHHHHHHhccc
Q 036589 130 NALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
.++.+.|++++|...|++..+...
T Consensus 84 ~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 84 LSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCC
Confidence 999999999999999999987644
No 125
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.44 E-value=3.8e-07 Score=68.59 Aligned_cols=163 Identities=12% Similarity=-0.042 Sum_probs=110.7
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---C-C
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---R-V 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g-~ 83 (176)
.+..+...|...|++++|...|++...... ...........|..+...|...|++++|...+++..+.. + .
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 162 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLAK-----SMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDR 162 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-----HccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhch
Confidence 466777888888999988888877521100 001112345678888888889999999998888866541 1 1
Q ss_pred CCchHHHHHHHHHHHhccC-----------------HHHHHHHHHhcccC----CC-CccHhHHHHHHHHHHhcCcHHHH
Q 036589 84 IPEEIIFCNVISFYGRARL-----------------LEHALQVFDEMPSF----NV-QRTVKSLNTLLNALLTCGKLDRM 141 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~-----------------~~~a~~~~~~m~~~----~~-~p~~~~~~~ll~~~~~~g~~~~a 141 (176)
.....++..+...|...|+ +++|++.|++..+. +. ......+..+...|...|++++|
T Consensus 163 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 242 (411)
T 4a1s_A 163 LSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAA 242 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 2234577788888889999 88888888776431 11 12335777888888999999999
Q ss_pred HHHHHHHHhcccccc----chHHHHHHHHHhhccccCC
Q 036589 142 KELFISFNLKAIAVL----DGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 142 ~~l~~~m~~~~~~~p----~~~t~~~li~~~~~~g~~~ 175 (176)
.+.|++..+.....+ ...++..+...|...|+++
T Consensus 243 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 280 (411)
T 4a1s_A 243 IEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFE 280 (411)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHH
Confidence 999988765322101 2347778888888887754
No 126
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.43 E-value=8.4e-06 Score=56.30 Aligned_cols=145 Identities=10% Similarity=-0.014 Sum_probs=112.2
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcC----ChHHHHHHHHHHhhc
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAK----MFDEMQQILHQLKHD 80 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g----~~~~a~~~~~~m~~~ 80 (176)
++..+..|-..|...+++++|++.|+.. .+.+ ++..+..+-..|.. + ++++|.+.|++..+.
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a-~~~g------------~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~ 82 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKA-AAQG------------DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA 82 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHTT------------CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHH-HHcC------------CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC
Confidence 3445667777888899999999999998 3422 67788888888888 6 899999999999876
Q ss_pred CCCCCchHHHHHHHHHHHh----ccCHHHHHHHHHhcccCCCC-ccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHhc
Q 036589 81 TRVIPEEIIFCNVISFYGR----ARLLEHALQVFDEMPSFNVQ-RTVKSLNTLLNALLT----CGKLDRMKELFISFNLK 151 (176)
Q Consensus 81 ~g~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~~ 151 (176)
| +...+..|-..|.. .+++++|+..|++..+.|.. .+...+..|-..|.. .+++++|.+.|++..+.
T Consensus 83 -g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 83 -G---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp -T---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred -C---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 4 55677778888877 78999999999999987622 136788888888888 78999999999998876
Q ss_pred cccccchHHHHHHHHHhhc
Q 036589 152 AIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 152 ~~~~p~~~t~~~li~~~~~ 170 (176)
+ .+...+..|-..|..
T Consensus 159 --~-~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 159 --S-RTGYAEYWAGMMFQQ 174 (212)
T ss_dssp --S-CTTHHHHHHHHHHHH
T ss_pred --C-CCHHHHHHHHHHHHc
Confidence 2 233355556555543
No 127
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.42 E-value=5.8e-06 Score=50.50 Aligned_cols=98 Identities=8% Similarity=-0.087 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+...+...|++++|.+.|+... .. .+.+...|..+..++...|++++|...+++..+. . ..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~----------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-~-~~~ 71 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAI-KL----------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL-K-PDW 71 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHH-HH----------CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh-C-ccc
Confidence 456777888999999999999999972 21 1236788899999999999999999999999876 2 235
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccCC
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSFN 117 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 117 (176)
...+..+..++...|++++|.+.|++..+..
T Consensus 72 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 72 GKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 6778889999999999999999999988654
No 128
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.41 E-value=1.3e-06 Score=56.53 Aligned_cols=138 Identities=11% Similarity=-0.056 Sum_probs=97.8
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---C-C
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---R-V 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g-~ 83 (176)
++..+-..+...|++++|+..|++...... ...........+..+...+...|++++|.+.+++..+.. + .
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAK-----EFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-----HhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 456777788889999999999988621100 000001112478888899999999999999999876541 1 1
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCC-ccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQ-RTVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~-p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
......+..+...+...|++++|.+.+++..+. +.. .....+..+...+...|++++|.+.+++..+
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 112456777888999999999999999876632 211 1245677888889999999999999988765
No 129
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.40 E-value=4.9e-06 Score=62.23 Aligned_cols=159 Identities=12% Similarity=-0.005 Sum_probs=112.6
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCC-CcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CC
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFR-YNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RV 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~ 83 (176)
++..+-..|...|++++|+..+++...-.. ...... ....+++.+..+|...|++++|...|++..+.. +-
T Consensus 143 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 143 FHFKVAEAYYHMKQTHVSMYHILQALDIYQ-----NHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----TSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-----hCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 566778889999999999888877521100 001111 235678899999999999999999998877531 11
Q ss_pred -CCchHHHHHHHHHHHhccCHHHHHHHHHhccc----CCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcc----cc
Q 036589 84 -IPEEIIFCNVISFYGRARLLEHALQVFDEMPS----FNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKA----IA 154 (176)
Q Consensus 84 -~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~----~~ 154 (176)
.....+++.+-.+|...|++++|+..|++..+ .+.+....++..+...+.+.|++++|.+.+++..+.. -+
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 297 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHK 297 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCS
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH
Confidence 12345778899999999999999999998875 1223347778889999999999999999999987532 22
Q ss_pred ccchHHHHHHHHHhhccc
Q 036589 155 VLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 155 ~p~~~t~~~li~~~~~~g 172 (176)
.....+..+-..|...+
T Consensus 298 -~~~~~~~~l~~ly~~~~ 314 (378)
T 3q15_A 298 -FYKELFLFLQAVYKETV 314 (378)
T ss_dssp -CHHHHHHHHHHHHSSSC
T ss_pred -HHHHHHHHHHHHHhCCC
Confidence 22334555544554444
No 130
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.40 E-value=6.5e-06 Score=70.79 Aligned_cols=116 Identities=12% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
+.+|..+-.++...|++++|++.|.... |...|..++.+|.+.|++++|.+.|...++. . +
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKAd----------------D~say~eVa~~~~~lGkyEEAIeyL~mArk~-~--~ 1165 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKAD----------------DPSSYMEVVQAANTSGNWEELVKYLQMARKK-A--R 1165 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhcC----------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-c--c
Confidence 5578889999999999999999997651 6788888999999999999999999877655 2 3
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFIS 147 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~ 147 (176)
+....+.+..+|++.+++++.....+ .++...|..+-..|...|++++|..+|..
T Consensus 1166 e~~Idt~LafaYAKl~rleele~fI~-------~~n~ad~~~iGd~le~eg~YeeA~~~Y~k 1220 (1630)
T 1xi4_A 1166 ESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNN 1220 (1630)
T ss_pred cccccHHHHHHHHhhcCHHHHHHHHh-------CCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 33333346666666666664333321 23334444444444555555555554444
No 131
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.39 E-value=6.3e-07 Score=67.35 Aligned_cols=157 Identities=10% Similarity=-0.070 Sum_probs=115.2
Q ss_pred HHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc--HHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---C-C
Q 036589 10 FRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN--LLHYDLIITKLGRAKMFDEMQQILHQLKHDT---R-V 83 (176)
Q Consensus 10 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g-~ 83 (176)
..+-..+...|++++|+..|++..... +. .+. ...|..+...+...|++++|...+++..+.. + .
T Consensus 52 ~~~g~~~~~~g~~~~A~~~~~~al~~~--------~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 122 (411)
T 4a1s_A 52 ALEGERLCNAGDCRAGVAFFQAAIQAG--------TE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDR 122 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--------CS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhc--------cc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCc
Confidence 345667788999999999999973221 11 111 2578889999999999999999999876531 1 2
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----C-CCccHhHHHHHHHHHHhcCc-----------------HHHH
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----N-VQRTVKSLNTLLNALLTCGK-----------------LDRM 141 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~-~~p~~~~~~~ll~~~~~~g~-----------------~~~a 141 (176)
......+..+...|...|++++|+..|++..+. + ......++..+...|...|+ +++|
T Consensus 123 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 123 LGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 334567888999999999999999999887642 1 12235578888899999999 9999
Q ss_pred HHHHHHHHhc----cccccchHHHHHHHHHhhccccCC
Q 036589 142 KELFISFNLK----AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 142 ~~l~~~m~~~----~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
.+.+.+..+. +.......++..+...|...|+++
T Consensus 203 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 240 (411)
T 4a1s_A 203 VEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQ 240 (411)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChH
Confidence 9999886542 111023567888888888888764
No 132
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.39 E-value=1.1e-06 Score=54.83 Aligned_cols=111 Identities=11% Similarity=0.055 Sum_probs=86.5
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC-CCCc
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR-VIPE 86 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g-~~~~ 86 (176)
.+..+...+...|++++|...|++. ... .+.+...|..+...+...|++++|...+++...... ..++
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a-~~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 74 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKA-KEL----------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED 74 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHH-Hhc----------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh
Confidence 4667788899999999999999997 221 133678889999999999999999999999887621 1122
Q ss_pred ----hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHH
Q 036589 87 ----EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA 131 (176)
Q Consensus 87 ----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 131 (176)
..++..+..+|.+.|++++|.+.|++..+.. |+......+-..
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~l~~~ 121 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH--RTPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence 6778889999999999999999999988653 565555544443
No 133
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.39 E-value=5.5e-06 Score=52.11 Aligned_cols=97 Identities=5% Similarity=-0.076 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHH
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNAL 132 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~ 132 (176)
.+..+...+.+.|++++|...|++..+.. .-+...|..+-.++.+.|++++|+..|++..+.. +-+...+..+...+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKE--PEREEAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAALAVSH 95 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 35557778889999999999999999762 3367778889999999999999999999988654 23667888899999
Q ss_pred HhcCcHHHHHHHHHHHHhcc
Q 036589 133 LTCGKLDRMKELFISFNLKA 152 (176)
Q Consensus 133 ~~~g~~~~a~~l~~~m~~~~ 152 (176)
...|++++|.+.|++..+..
T Consensus 96 ~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999987643
No 134
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.38 E-value=3.4e-06 Score=62.91 Aligned_cols=162 Identities=10% Similarity=-0.131 Sum_probs=115.1
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CC-
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RV- 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~- 83 (176)
.+..+-..+...|++++|.+.|++...... ...........|..+...+...|++++|...+++..... +.
T Consensus 189 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 263 (406)
T 3sf4_A 189 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAK-----EFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 263 (406)
T ss_dssp HHHHHHHHHHHHTBHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHH-----hcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCc
Confidence 466778888999999999999988621100 000111123478889999999999999999999877541 11
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc----ccc
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLK----AIA 154 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~----~~~ 154 (176)
.....++..+...|.+.|++++|...|++..+. +..+ ...++..+...|...|++++|.+.|++..+. +..
T Consensus 264 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 343 (406)
T 3sf4_A 264 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDK 343 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 112567788999999999999999999887642 1111 2567888889999999999999999987643 211
Q ss_pred ccchHHHHHHHHHhhccccC
Q 036589 155 VLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 155 ~p~~~t~~~li~~~~~~g~~ 174 (176)
.....++..+...|...|+.
T Consensus 344 ~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 344 SGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHhhHh
Confidence 03466777777788777764
No 135
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.38 E-value=9.1e-06 Score=59.55 Aligned_cols=121 Identities=7% Similarity=-0.077 Sum_probs=91.6
Q ss_pred CcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-----cH
Q 036589 49 YNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV-IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-----TV 122 (176)
Q Consensus 49 ~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-----~~ 122 (176)
++...+..+..++...|++++|.+++++.... +. .-+...+..++..+.+.|+.+.|.+.+++|.+. .| +-
T Consensus 98 ~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~-~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--~~d~~~~~d 174 (310)
T 3mv2_B 98 NSPYELYLLATAQAILGDLDKSLETCVEGIDN-DEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--IEDTVSGDN 174 (310)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS-SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-CCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--Cccccccch
Confidence 45566668889999999999999999998765 32 347788888999999999999999999999864 35 24
Q ss_pred hHHHHHHHH--HH--hcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 123 KSLNTLLNA--LL--TCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 123 ~~~~~ll~~--~~--~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
.+...|..+ .. ..+++.+|..+|+++.+. . |+..+-..++.++...|+++
T Consensus 175 ~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--~-p~~~~~~lLln~~~~~g~~~ 228 (310)
T 3mv2_B 175 EMILNLAESYIKFATNKETATSNFYYYEELSQT--F-PTWKTQLGLLNLHLQQRNIA 228 (310)
T ss_dssp HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT--S-CSHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh--C-CCcccHHHHHHHHHHcCCHH
Confidence 555555555 22 344899999999998664 2 44445556666788888765
No 136
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.38 E-value=2.4e-06 Score=58.13 Aligned_cols=133 Identities=8% Similarity=-0.104 Sum_probs=94.0
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc-----------HHHHHHHHHHHHhcCChHHHHHHHHHH
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN-----------LLHYDLIITKLGRAKMFDEMQQILHQL 77 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~y~~li~~~~~~g~~~~a~~~~~~m 77 (176)
+..+-..+.+.|++++|+..|++...... ....... ...|..+..+|.+.|++++|...+++.
T Consensus 41 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 114 (198)
T 2fbn_A 41 IKEEGNEFFKKNEINEAIVKYKEALDFFI------HTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTT------TCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHh------cccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45566788899999999999998722110 0010011 378888999999999999999999999
Q ss_pred hhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHH-HHHHHHHh
Q 036589 78 KHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMK-ELFISFNL 150 (176)
Q Consensus 78 ~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~-~l~~~m~~ 150 (176)
.+. ...+...+..+..+|...|++++|+..|++..+.. +-+...+..+...+...++.+++. ..|..|..
T Consensus 115 l~~--~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 115 LKI--DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLN-PNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHH--STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHh--CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 876 23456788889999999999999999999987543 235667777778888877777776 55555544
No 137
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.38 E-value=3e-06 Score=57.28 Aligned_cols=139 Identities=10% Similarity=-0.056 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc---CCC
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD---TRV 83 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~---~g~ 83 (176)
..+..+-..+...|++++|...|++...... ...........+..+...+...|++++|.+.+++..+. .+-
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 101 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQ-----KSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPE 101 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCc
Confidence 3567778888999999999999888622000 00111234567888999999999999999999887654 221
Q ss_pred C--CchHHHHHHHHHHHhccCHHHHHHHHHhccc----CCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 84 I--PEEIIFCNVISFYGRARLLEHALQVFDEMPS----FNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 84 ~--~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
. .....+..+...+...|++++|...|++..+ .+... -..++..+-..+...|++++|.+.+++..+
T Consensus 102 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 175 (203)
T 3gw4_A 102 DPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARD 175 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 2 2345678889999999999999999988763 22111 134467888899999999999999988764
No 138
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.37 E-value=9e-07 Score=64.64 Aligned_cols=161 Identities=7% Similarity=-0.020 Sum_probs=108.5
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CC-
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RV- 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~- 83 (176)
.|+.....|...|++++|...|.+...-.. .......-...|+.+...|.+.|++++|...|++..+.. |-
T Consensus 38 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~ 112 (307)
T 2ifu_A 38 EYAKAAVAFKNAKQLEQAKDAYLQEAEAHA-----NNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP 112 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH
Confidence 355666778888999999888887511100 000101124578889999999999999999998866431 11
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccc---
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAV--- 155 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~--- 155 (176)
..-..+++.+-..|.. |++++|+..|++..+. +-.+ ...+++.+-..|.+.|++++|++.|++..+.....
T Consensus 113 ~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 191 (307)
T 2ifu_A 113 DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENY 191 (307)
T ss_dssp HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh
Confidence 1124677788888888 9999999999877632 1111 14678888999999999999999999887532210
Q ss_pred cc-hHHHHHHHHHhhccccC
Q 036589 156 LD-GLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 156 p~-~~t~~~li~~~~~~g~~ 174 (176)
+. ...+..+...+...|++
T Consensus 192 ~~~~~~~~~~g~~~~~~g~~ 211 (307)
T 2ifu_A 192 PTCYKKCIAQVLVQLHRADY 211 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHHHHcCCH
Confidence 22 23566666666666664
No 139
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.35 E-value=7.6e-06 Score=59.21 Aligned_cols=131 Identities=12% Similarity=-0.026 Sum_probs=101.6
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHH-HHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLH-YDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
+..+..+...+.+.|++++|...|+.. .. ..|+... .......+.+.++.++|.+.+++..+. -+
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~-~~-----------~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~--~P 216 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTI-PL-----------QDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAE--NP 216 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTS-CG-----------GGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--CT
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhC-ch-----------hhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhc--CC
Confidence 345677889999999999999999998 33 2334433 333334466788888899999998876 23
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCC-ccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQ-RTVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
.+...+..+...|...|++++|+..|++..+..-. .+...+..+...|...|+.++|...|++-..
T Consensus 217 ~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 217 EDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 45677888999999999999999999999865411 2367899999999999999999998887543
No 140
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.35 E-value=5.6e-06 Score=63.94 Aligned_cols=121 Identities=11% Similarity=-0.037 Sum_probs=96.1
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc-------------hHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE-------------EIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~-------------~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
....|..+...+.+.|++++|...|++..+...-.++ ...|..+..+|.+.|++++|+..|++..+.
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3457888889999999999999999999875221111 578889999999999999999999998865
Q ss_pred CCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcccc
Q 036589 117 NVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 117 ~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
. +.+...|..+-.+|...|++++|...|++..+.... +...+..+-.++.+.++
T Consensus 347 ~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~--~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 347 D-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ--NKAARLQISMCQKKAKE 400 (457)
T ss_dssp S-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------CHHHHHHHHHHHHHH
T ss_pred C-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHH
Confidence 4 346788999999999999999999999999887554 55677777776665554
No 141
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.34 E-value=2.3e-05 Score=56.53 Aligned_cols=99 Identities=12% Similarity=0.001 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...+..+...+.+.|++++|...|++..+.. .-+...|..+..+|.+.|++++|+..|++..+.. +-+...+..+.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg 79 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFLG 79 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Confidence 56778889999999999999999999998762 2367788899999999999999999999988654 34678888999
Q ss_pred HHHHhcCcHHHHHHHHHHHHhc
Q 036589 130 NALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 130 ~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
.+|...|++++|.+.|.+..+.
T Consensus 80 ~~~~~~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 80 QCQLEMESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHh
Confidence 9999999999999999988764
No 142
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.34 E-value=1.8e-06 Score=54.79 Aligned_cols=100 Identities=5% Similarity=-0.147 Sum_probs=83.5
Q ss_pred CCCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC
Q 036589 3 KAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR 82 (176)
Q Consensus 3 ~p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g 82 (176)
..++..+..+-..+...|++++|+..|+..... .+.+...|..+..++...|++++|...+++..+. .
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~ 73 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITR-----------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-D 73 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh-----------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-C
Confidence 344557788888999999999999999987222 1236788999999999999999999999999976 2
Q ss_pred CCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 83 VIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
.-+...+..+..+|...|++++|+..|++..+
T Consensus 74 -p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 74 -GQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33567888899999999999999999998874
No 143
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.33 E-value=1e-05 Score=56.19 Aligned_cols=137 Identities=7% Similarity=-0.132 Sum_probs=97.8
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh------------------cCChHH
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR------------------AKMFDE 69 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~------------------~g~~~~ 69 (176)
.+..+..+|.+.|++++|+..|+++.... +....-...+..+..++.+ .|++++
T Consensus 43 a~~~lg~~~~~~~~~~~A~~~~~~~l~~~--------P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (225)
T 2yhc_A 43 VQLDLIYAYYKNADLPLAQAAIDRFIRLN--------PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARA 114 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHC--------cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHH
Confidence 46677889999999999999999973221 1211112345445555544 578999
Q ss_pred HHHHHHHHhhcCCCCCchHH---------------HHHHHHHHHhccCHHHHHHHHHhcccCCCCcc----HhHHHHHHH
Q 036589 70 MQQILHQLKHDTRVIPEEII---------------FCNVISFYGRARLLEHALQVFDEMPSFNVQRT----VKSLNTLLN 130 (176)
Q Consensus 70 a~~~~~~m~~~~g~~~~~~~---------------~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~----~~~~~~ll~ 130 (176)
|...|+++.+...-.+.... ...+...|.+.|++++|+..|+++.+.- |+ ...+..+..
T Consensus 115 A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~l~~ 192 (225)
T 2yhc_A 115 AFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY--PDTQATRDALPLMEN 192 (225)
T ss_dssp HHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC--cCCCccHHHHHHHHH
Confidence 99999999976321121110 0235667889999999999999988542 33 256888999
Q ss_pred HHHhcCcHHHHHHHHHHHHhcccc
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
++.+.|+.++|.+.++.+...+..
T Consensus 193 ~~~~~g~~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 193 AYRQMQMNAQAEKVAKIIAANSSN 216 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHCCSC
T ss_pred HHHHcCCcHHHHHHHHHHHhhCCC
Confidence 999999999999999998876543
No 144
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.33 E-value=2.5e-06 Score=63.58 Aligned_cols=163 Identities=10% Similarity=-0.009 Sum_probs=116.1
Q ss_pred CHHHHHHHHHhccC--------------------hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCCh
Q 036589 8 SPFRLASLLHLQKH--------------------PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMF 67 (176)
Q Consensus 8 ~~~~l~~~~~~~~~--------------------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~ 67 (176)
.+..+-..|...|+ +++|.+.|++...-.. ...........|..+...+...|++
T Consensus 129 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~la~~~~~~g~~ 203 (406)
T 3sf4_A 129 ALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVT-----ALGDRAAQGRAFGNLGNTHYLLGNF 203 (406)
T ss_dssp HHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHHTBH
T ss_pred HHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH-----hccCcHHHHHHHHHHHHHHHHccCH
Confidence 56677788888899 8888888876411100 0011122345788899999999999
Q ss_pred HHHHHHHHHHhhcCC----CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCc-cHhHHHHHHHHHHhcCcH
Q 036589 68 DEMQQILHQLKHDTR----VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQR-TVKSLNTLLNALLTCGKL 138 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g----~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p-~~~~~~~ll~~~~~~g~~ 138 (176)
++|...+++..+... ......++..+...|...|++++|...|++..+. +..+ ...++..+...|...|++
T Consensus 204 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 283 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDY 283 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcH
Confidence 999999998875411 1112347888999999999999999999987632 1111 156788899999999999
Q ss_pred HHHHHHHHHHHhccccc----cchHHHHHHHHHhhccccCC
Q 036589 139 DRMKELFISFNLKAIAV----LDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 139 ~~a~~l~~~m~~~~~~~----p~~~t~~~li~~~~~~g~~~ 175 (176)
++|.+.|++..+..... ....++..+...|...|+++
T Consensus 284 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 324 (406)
T 3sf4_A 284 EKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHD 324 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 99999999886532210 22667888888888888754
No 145
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.31 E-value=3e-06 Score=61.17 Aligned_cols=158 Identities=10% Similarity=-0.052 Sum_probs=109.3
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc--HHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---C-
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN--LLHYDLIITKLGRAKMFDEMQQILHQLKHDT---R- 82 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g- 82 (176)
+...-..+.+.|++++|...|++..... +. .+. ...|..+...+...|++++|...+++..... +
T Consensus 8 l~~~g~~~~~~g~~~~A~~~~~~al~~~--------~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 78 (338)
T 3ro2_A 8 LALEGERLCKSGDCRAGVSFFEAAVQVG--------TE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD 78 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--------CS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhC--------cc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccc
Confidence 4455677888999999999999972221 11 111 4678888999999999999999988865431 1
Q ss_pred CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCC-ccHhHHHHHHHHHHhcCc--------------------
Q 036589 83 VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQ-RTVKSLNTLLNALLTCGK-------------------- 137 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~-p~~~~~~~ll~~~~~~g~-------------------- 137 (176)
.......+..+...|...|++++|...|++..+. +-. ....++..+...+...|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 1223567778888999999999999988876532 111 113477788888888888
Q ss_pred HHHHHHHHHHHHhc----cccccchHHHHHHHHHhhccccCC
Q 036589 138 LDRMKELFISFNLK----AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 138 ~~~a~~l~~~m~~~----~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+++|.+.+++..+. +.......++..+...|...|+++
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 200 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFR 200 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Confidence 88888888776532 111023456777777777777653
No 146
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.29 E-value=1.3e-05 Score=60.18 Aligned_cols=120 Identities=8% Similarity=-0.099 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--------------CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDT--------------RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~--------------g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
...|..+...+.+.|++++|.+.|++..+.. --..+...|..+..+|.+.|++++|+..+++..+.
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 3457778889999999999999999988610 01224578888999999999999999999999865
Q ss_pred CCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcccc
Q 036589 117 NVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 117 ~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
. +-+...|..+-.+|...|++++|.+.|++..+.... +...+..+-..+...++
T Consensus 303 ~-p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~--~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 303 D-PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE--DKAIQAELLKVKQKIKA 356 (370)
T ss_dssp C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHH
T ss_pred C-chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHH
Confidence 4 346788899999999999999999999998876543 56666666666655443
No 147
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.29 E-value=2.1e-05 Score=56.79 Aligned_cols=123 Identities=12% Similarity=0.040 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchH----HHHHHHHHHHhccCHHHHHHHHHhcccCCCC-cc----Hh
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEI----IFCNVISFYGRARLLEHALQVFDEMPSFNVQ-RT----VK 123 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~----~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~-p~----~~ 123 (176)
.+...+..+...|++++|..++++........|+.. .+..+...+...|++++|+..|++..+.... ++ ..
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 156 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLY 156 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHH
Confidence 344457788899999999999999987634445532 3345777777888999999999988753222 22 33
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhc-----cccccchHHHHHHHHHhhccccCC
Q 036589 124 SLNTLLNALLTCGKLDRMKELFISFNLK-----AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 124 ~~~~ll~~~~~~g~~~~a~~l~~~m~~~-----~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+++.+-..|...|++++|...|++..+. +...-...+|..+...|.+.|+++
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~ 213 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYE 213 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHH
Confidence 6999999999999999999999998741 222023458888889998888764
No 148
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.28 E-value=2.6e-05 Score=51.16 Aligned_cols=104 Identities=15% Similarity=0.016 Sum_probs=86.1
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--------C--------CCCchHHHHHHHHHHHhccCHHHHHHHHHhc
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDT--------R--------VIPEEIIFCNVISFYGRARLLEHALQVFDEM 113 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~--------g--------~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m 113 (176)
....+......+.+.|++++|...|++..... . -..+...|..+..+|.+.|++++|+..++..
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 46678888999999999999999999987640 0 1123467888999999999999999999998
Q ss_pred ccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 114 PSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 114 ~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
.+.. +.+...|..+-.+|...|++++|.+.|+...+..+.
T Consensus 90 l~~~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 90 LKRE-ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HhcC-CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 8654 446788999999999999999999999998876543
No 149
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.28 E-value=1e-06 Score=63.76 Aligned_cols=164 Identities=13% Similarity=-0.030 Sum_probs=116.0
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC----
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR---- 82 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g---- 82 (176)
..+..+...+...|++++|.+.|++...... .....+.....+..+...+...|++++|...+++..+...
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 118 (338)
T 3ro2_A 44 AIYSQLGNAYFYLHDYAKALEYHHHDLTLAR-----TIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELND 118 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhh-----cccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC
Confidence 3567788899999999999999887511100 0001122356788899999999999999999998765411
Q ss_pred CCCchHHHHHHHHHHHhccC--------------------HHHHHHHHHhcccC----CC-CccHhHHHHHHHHHHhcCc
Q 036589 83 VIPEEIIFCNVISFYGRARL--------------------LEHALQVFDEMPSF----NV-QRTVKSLNTLLNALLTCGK 137 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~g~--------------------~~~a~~~~~~m~~~----~~-~p~~~~~~~ll~~~~~~g~ 137 (176)
......++..+...|...|+ +++|...+++..+. +. ......+..+...+...|+
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 198 (338)
T 3ro2_A 119 KVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGN 198 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Confidence 11124478889999999999 99999998876531 11 1234568888899999999
Q ss_pred HHHHHHHHHHHHhccc----cccchHHHHHHHHHhhccccCC
Q 036589 138 LDRMKELFISFNLKAI----AVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 138 ~~~a~~l~~~m~~~~~----~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+++|.+.+++..+... ......++..+...|...|+++
T Consensus 199 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 240 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFE 240 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHH
Confidence 9999999998764321 1022447788888888877754
No 150
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.28 E-value=7e-06 Score=63.78 Aligned_cols=113 Identities=12% Similarity=-0.013 Sum_probs=88.7
Q ss_pred HHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc
Q 036589 58 ITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK 137 (176)
Q Consensus 58 i~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~ 137 (176)
...+.+.|++++|.+.|++..+. ..-+...|..+..+|.+.|++++|++.|++..+.. +-+...|..+-.+|.+.|+
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIEL--NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALGK 89 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHh--CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCC
Confidence 34556789999999999999876 23357888999999999999999999999988654 3467888999999999999
Q ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHH--hhccccCC
Q 036589 138 LDRMKELFISFNLKAIAVLDGLCSNLKIIM--NDSQVRVT 175 (176)
Q Consensus 138 ~~~a~~l~~~m~~~~~~~p~~~t~~~li~~--~~~~g~~~ 175 (176)
+++|.+.|++..+.... +...+..+-.+ +.+.|+++
T Consensus 90 ~~eA~~~~~~al~~~p~--~~~~~~~l~~~~~~~~~g~~~ 127 (477)
T 1wao_1 90 FRAALRDYETVVKVKPH--DKDAKMKYQECNKIVKQKAFE 127 (477)
T ss_dssp HHHHHHHHHHHHHHSTT--CTTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998876554 33444444444 66666554
No 151
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.25 E-value=1.3e-06 Score=67.82 Aligned_cols=121 Identities=7% Similarity=-0.077 Sum_probs=92.2
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHH
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFC 91 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~ 91 (176)
+-..+.+.|++++|++.|++.... .+-+...|..+..+|.+.|++++|.+.+++..+. . .-+...+.
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~-----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l-~-p~~~~~~~ 78 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIEL-----------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL-D-KKYIKGYY 78 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-C-TTCHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHh-----------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-C-CCCHHHHH
Confidence 344567889999999999987222 1236889999999999999999999999999977 2 34567888
Q ss_pred HHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHH--HHhcCcHHHHHHHHH
Q 036589 92 NVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA--LLTCGKLDRMKELFI 146 (176)
Q Consensus 92 ~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~--~~~~g~~~~a~~l~~ 146 (176)
.+..+|.+.|++++|++.|++..+.. +-+...+..+-.+ +.+.|++++|.++++
T Consensus 79 ~lg~~~~~~g~~~eA~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 79 RRAASNMALGKFRAALRDYETVVKVK-PHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHS-TTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 89999999999999999999987643 2234455555555 888899999999998
No 152
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.24 E-value=6.2e-06 Score=53.77 Aligned_cols=96 Identities=10% Similarity=-0.123 Sum_probs=79.5
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+-..+.+.|++++|+..|+..... .+.+...|..+..+|...|++++|...|++..+.. +-+.
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~ 89 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQALCVL-----------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD--IXEP 89 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHc-----------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCCc
Confidence 4566777889999999999999987221 13378889999999999999999999999998762 2355
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
..+..+..+|...|++++|+..|+...+.
T Consensus 90 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 90 RFPFHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 67788999999999999999999988753
No 153
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.23 E-value=7.9e-06 Score=51.25 Aligned_cols=96 Identities=8% Similarity=-0.071 Sum_probs=80.2
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.|..+-..+.+.|++++|+..|++.... .+.+...|..+..++.+.|++++|...+++..+. . .-+.
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-~-p~~~ 72 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKR-----------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEK-D-PNFV 72 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh-----------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-C-CCcH
Confidence 4566778889999999999999997222 1236889999999999999999999999999976 2 2346
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
..|..+..+|...|++++|+..|++..+.
T Consensus 73 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 73 RAYIRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 77888999999999999999999988753
No 154
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.23 E-value=1.4e-05 Score=52.60 Aligned_cols=97 Identities=5% Similarity=-0.128 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+-..+.+.|++++|++.|++.. .. .+-+...|..+..+|.+.|++++|...|++..+. . .-+
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~-p~~ 78 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQAL-SI----------APANPIYLSNRAAAYSASGQHEKAAEDAELATVV-D-PKY 78 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-Hh----------CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-C-CCC
Confidence 356777888999999999999999972 21 1237889999999999999999999999999977 2 335
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
...|..+..+|.+.|++++|+..|++..+.
T Consensus 79 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 79 SKAWSRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 778888999999999999999999988754
No 155
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.22 E-value=7.5e-06 Score=52.72 Aligned_cols=96 Identities=10% Similarity=-0.090 Sum_probs=79.0
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.+..+-..+.+.|++++|...|+..... .+.+...|..+..++.+.|++++|...|+..... . +-+.
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-p~~~ 86 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCML-----------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALM-D-INEP 86 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCT
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHh-----------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-C-CCCc
Confidence 3455677888999999999999997222 1237888999999999999999999999999977 2 2345
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
..+..+..+|...|++++|+..|+...+.
T Consensus 87 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 87 RFPFHAAECHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 66778999999999999999999988753
No 156
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.21 E-value=8.5e-06 Score=51.21 Aligned_cols=97 Identities=6% Similarity=-0.127 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+-..+.+.|++++|+..|+..... .+-+...|..+..++...|++++|...|++..+. . .-+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-~-P~~ 84 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQK-----------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML-D-PKD 84 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTC
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHH-----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-CCC
Confidence 35666778899999999999999997222 1237888999999999999999999999999876 2 224
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
...+..+..+|.+.|++++|+..|++..+.
T Consensus 85 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 85 IAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 567788999999999999999999998754
No 157
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.20 E-value=5e-06 Score=55.31 Aligned_cols=109 Identities=6% Similarity=-0.034 Sum_probs=85.0
Q ss_pred HhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHH-HHhcCcH--
Q 036589 62 GRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA-LLTCGKL-- 138 (176)
Q Consensus 62 ~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~-~~~~g~~-- 138 (176)
...|++++|...++...+.. ..+...|..+...|...|++++|+..|++..+.. +.+...+..+... +...|++
T Consensus 21 ~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRAN--PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR-GENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp C-----CCCCHHHHHHHHHC--CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhccCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhcCCcch
Confidence 45788999999999888762 3456788889999999999999999999987543 2366777788888 7789998
Q ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 139 DRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 139 ~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
++|...|++..+.... +...+..+...|...|+++
T Consensus 98 ~~A~~~~~~al~~~p~--~~~~~~~la~~~~~~g~~~ 132 (177)
T 2e2e_A 98 AQTRAMIDKALALDSN--EITALMLLASDAFMQANYA 132 (177)
T ss_dssp HHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHcccHH
Confidence 9999999999887654 6778888888888888764
No 158
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.19 E-value=3.8e-05 Score=55.96 Aligned_cols=135 Identities=8% Similarity=-0.058 Sum_probs=98.0
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCC-CCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CC
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKP-FRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RV 83 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~-~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~ 83 (176)
+|+.+...|.+.|++++|+..|++...-.. ..+ ......+|..+...|.. |++++|...|++..... +-
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~------~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~ 150 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYV------ENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER 150 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHH------TTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHH------HcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC
Confidence 466777888889999999888887411100 011 11124678888899988 99999999999877541 11
Q ss_pred C-CchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCcc-HhHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 036589 84 I-PEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQRT-VKSLNTLLNALLTCGKLDRMKELFISFN 149 (176)
Q Consensus 84 ~-~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p~-~~~~~~ll~~~~~~g~~~~a~~l~~~m~ 149 (176)
. ....+++.+...|.+.|++++|+..|++..+. +..++ ...+..+...+...|++++|...|++..
T Consensus 151 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 151 LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 1 12467888999999999999999999987742 22222 2366677778888899999999999987
No 159
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.19 E-value=2.8e-05 Score=48.60 Aligned_cols=101 Identities=10% Similarity=-0.116 Sum_probs=77.5
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc-
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE- 86 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~- 86 (176)
.+..+-..+.+.|++++|...|+...... +........+..+..++.+.|++++|...|++..+...-.+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 75 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELY--------PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKA 75 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHC--------CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCccc
Confidence 45566778889999999999999973221 222222367778899999999999999999999876211111
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
...+..+..+|.+.|++++|...|++..+.
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456777889999999999999999998854
No 160
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.18 E-value=6.4e-05 Score=55.78 Aligned_cols=160 Identities=11% Similarity=-0.052 Sum_probs=107.4
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CCC
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RVI 84 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~~ 84 (176)
.+..+-..+...|++++|...+++...... ..+.......|..+...+...|++++|...+++..... +..
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~ 210 (373)
T 1hz4_A 137 LVRIRAQLLWAWARLDEAEASARSGIEVLS------SYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYH 210 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTT------TSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhh------ccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcc
Confidence 345567788899999999999988521110 01111235678888899999999999999999887541 111
Q ss_pred CchHHHH--HHHHHHHhccCHHHHHHHHHhcccCCCCc---cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc----cccc
Q 036589 85 PEEIIFC--NVISFYGRARLLEHALQVFDEMPSFNVQR---TVKSLNTLLNALLTCGKLDRMKELFISFNLK----AIAV 155 (176)
Q Consensus 85 ~~~~~~~--~li~~~~~~g~~~~a~~~~~~m~~~~~~p---~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~----~~~~ 155 (176)
+...... ..+..+...|++++|...+++..+....+ ....+..+...+...|++++|.+++++.... +..
T Consensus 211 ~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~- 289 (373)
T 1hz4_A 211 SDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLM- 289 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-
T ss_pred hhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcch-
Confidence 1111111 23345789999999999999987543221 1235677788999999999999999987543 222
Q ss_pred cch-HHHHHHHHHhhccccC
Q 036589 156 LDG-LCSNLKIIMNDSQVRV 174 (176)
Q Consensus 156 p~~-~t~~~li~~~~~~g~~ 174 (176)
++. ..+..+-.++...|+.
T Consensus 290 ~~~~~~~~~la~~~~~~g~~ 309 (373)
T 1hz4_A 290 SDLNRNLLLLNQLYWQAGRK 309 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTCH
T ss_pred hhHHHHHHHHHHHHHHhCCH
Confidence 233 3566666777777664
No 161
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.17 E-value=5.5e-05 Score=57.77 Aligned_cols=153 Identities=13% Similarity=-0.022 Sum_probs=96.5
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCC----CCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc--
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPN----ANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD-- 80 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~-- 80 (176)
..||.|-..+...|++++|++.|++...- .. ....+....+|+.+..+|...|++++|...+++..+.
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~------~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~ 125 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHA------DQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCE 125 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSG------GGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCc------cccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhH
Confidence 35788889999999999999998874110 00 0112235778999999999999999999999887642
Q ss_pred --CC-CCC-chHHHHHHHHHHHhc--cCHHHHHHHHHhcccCCCCcc-HhHHHHHHHH---HHhcCcHHHHHHHHHHHHh
Q 036589 81 --TR-VIP-EEIIFCNVISFYGRA--RLLEHALQVFDEMPSFNVQRT-VKSLNTLLNA---LLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 81 --~g-~~~-~~~~~~~li~~~~~~--g~~~~a~~~~~~m~~~~~~p~-~~~~~~ll~~---~~~~g~~~~a~~l~~~m~~ 150 (176)
.+ ..+ ...+++.+-.++.+. +++++|+..|++..+.. |+ ...+..+... +...++.++|++.|++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~--p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~ 203 (472)
T 4g1t_A 126 KFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK--PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIR 203 (472)
T ss_dssp HSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHH
T ss_pred hcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhh
Confidence 01 112 234566555556554 46899999999877543 43 3333333333 3445666677777766655
Q ss_pred ccccccchHHHHHHHHHhh
Q 036589 151 KAIAVLDGLCSNLKIIMND 169 (176)
Q Consensus 151 ~~~~~p~~~t~~~li~~~~ 169 (176)
.... +...+..+...+.
T Consensus 204 l~p~--~~~~~~~l~~~~~ 220 (472)
T 4g1t_A 204 LNPD--NQYLKVLLALKLH 220 (472)
T ss_dssp HCSS--CHHHHHHHHHHHH
T ss_pred cCCc--chHHHHHHHHHHH
Confidence 4432 3444444443333
No 162
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.15 E-value=1.4e-05 Score=61.70 Aligned_cols=130 Identities=6% Similarity=-0.064 Sum_probs=100.0
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCc-------------HHHHHHHHHHHHhcCChHHHHHHH
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYN-------------LLHYDLIITKLGRAKMFDEMQQIL 74 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~y~~li~~~~~~g~~~~a~~~~ 74 (176)
.+..+-..|.+.|++++|+..|++..... +. .++ ...|..+..+|.+.|++++|...+
T Consensus 270 ~~~~~G~~~~~~g~~~~A~~~y~~Al~~~--------p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 340 (457)
T 1kt0_A 270 IVKEKGTVYFKGGKYMQAVIQYGKIVSWL--------EM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 340 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------TT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHh--------cc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 35566778899999999999999872211 11 111 578999999999999999999999
Q ss_pred HHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHH-HHHHHH
Q 036589 75 HQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKE-LFISFN 149 (176)
Q Consensus 75 ~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~-l~~~m~ 149 (176)
++..+. . .-+...|..+-.+|.+.|++++|+..|++..+.. +-+...+..+-..+.+.++.+++.+ ++..|.
T Consensus 341 ~~al~~-~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~-P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 341 DKALGL-D-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN-PQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHHHHH-S-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhc-C-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 2 3467788889999999999999999999998654 3356778888888999999887764 455553
No 163
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.13 E-value=6.6e-06 Score=61.04 Aligned_cols=129 Identities=10% Similarity=-0.042 Sum_probs=76.0
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcH------------------HHHHHHHHHHHhcCChHHH
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNL------------------LHYDLIITKLGRAKMFDEM 70 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~y~~li~~~~~~g~~~~a 70 (176)
+..+-..+.+.|++++|+..|++.. . ..|+. ..|..+..+|.+.|++++|
T Consensus 182 ~~~~g~~~~~~g~~~~A~~~y~~Al-~-----------~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A 249 (338)
T 2if4_A 182 RKMDGNSLFKEEKLEEAMQQYEMAI-A-----------YMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEA 249 (338)
T ss_dssp HHHHHHHTCSSSCCHHHHHHHHHHH-H-----------HSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHH-H-----------HhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4555677788999999999999862 2 12232 2788899999999999999
Q ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-cHhHHHHHHHH-HHhcCcHHHHHHHHHHH
Q 036589 71 QQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-TVKSLNTLLNA-LLTCGKLDRMKELFISF 148 (176)
Q Consensus 71 ~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~-~~~~g~~~~a~~l~~~m 148 (176)
...+++..+. . .-+...|..+..+|...|++++|+..|++..+.. | +...+..+... ....+..+++.++|..|
T Consensus 250 ~~~~~~al~~-~-p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~--p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~ 325 (338)
T 2if4_A 250 IGHCNIVLTE-E-EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA--PDDKAIRRELRALAEQEKALYQKQKEMYKGI 325 (338)
T ss_dssp HHHHHHHHHH-C-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------
T ss_pred HHHHHHHHHh-C-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999876 2 3466788889999999999999999999988643 4 34445544444 23456778888899888
Q ss_pred Hhccc
Q 036589 149 NLKAI 153 (176)
Q Consensus 149 ~~~~~ 153 (176)
.....
T Consensus 326 l~~~p 330 (338)
T 2if4_A 326 FKGKD 330 (338)
T ss_dssp -----
T ss_pred hCCCC
Confidence 76533
No 164
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.13 E-value=1.3e-05 Score=50.83 Aligned_cols=105 Identities=16% Similarity=0.044 Sum_probs=80.1
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC-CCCc
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR-VIPE 86 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g-~~~~ 86 (176)
.+..+=..+.+.|++++|++.|++.. +- .+-+...|..+..+|.+.|++++|.+.+++..+... ..++
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al-~~----------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAI-EL----------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH-Hh----------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 35566778899999999999999972 21 123688899999999999999999999999876411 1111
Q ss_pred ----hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHH
Q 036589 87 ----EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL 125 (176)
Q Consensus 87 ----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~ 125 (176)
..+|..+-.++...|++++|++.|++..+. .||....
T Consensus 79 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~--~~~~~~~ 119 (127)
T 4gcn_A 79 YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE--FRDPELV 119 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CcCHHHH
Confidence 246777888999999999999999987753 3565443
No 165
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.12 E-value=4.3e-05 Score=52.65 Aligned_cols=130 Identities=14% Similarity=-0.054 Sum_probs=102.0
Q ss_pred CHHHHHHHHHhcc----ChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----cCChHHHHHHHHHHhh
Q 036589 8 SPFRLASLLHLQK----HPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR----AKMFDEMQQILHQLKH 79 (176)
Q Consensus 8 ~~~~l~~~~~~~~----~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~ 79 (176)
.+..|-..|.. + ++++|++.|+.. .+.+ ++..+..|...|.. .+++++|...|++..+
T Consensus 52 a~~~lg~~y~~-~g~~~~~~~A~~~~~~A-~~~g------------~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 117 (212)
T 3rjv_A 52 ALALLAQLKIR-NPQQADYPQARQLAEKA-VEAG------------SKSGEIVLARVLVNRQAGATDVAHAITLLQDAAR 117 (212)
T ss_dssp HHHHHHHHTTS-STTSCCHHHHHHHHHHH-HHTT------------CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHc-CCCCCCHHHHHHHHHHH-HHCC------------CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHH
Confidence 44555556666 6 899999999998 4422 67888888888887 8899999999999997
Q ss_pred cCCCC-CchHHHHHHHHHHHh----ccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc-C-----cHHHHHHHHHHH
Q 036589 80 DTRVI-PEEIIFCNVISFYGR----ARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC-G-----KLDRMKELFISF 148 (176)
Q Consensus 80 ~~g~~-~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~-g-----~~~~a~~l~~~m 148 (176)
. |.. .+...+..|-..|.. .+++++|+..|++..+. ..+...+..|-..|... | ++++|.+.|+..
T Consensus 118 ~-~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~--~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 118 D-SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL--SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp S-TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT--SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred c-CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 7 432 136777788888888 78999999999998865 23555677777777654 3 899999999999
Q ss_pred Hhcccc
Q 036589 149 NLKAIA 154 (176)
Q Consensus 149 ~~~~~~ 154 (176)
.+.|.+
T Consensus 195 ~~~g~~ 200 (212)
T 3rjv_A 195 CLEGFD 200 (212)
T ss_dssp HHHTCH
T ss_pred HHcCCH
Confidence 988775
No 166
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.11 E-value=6e-06 Score=51.34 Aligned_cols=89 Identities=4% Similarity=-0.069 Sum_probs=67.6
Q ss_pred hccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHH
Q 036589 18 LQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFY 97 (176)
Q Consensus 18 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~ 97 (176)
..|++++|+..|++..... ..-+-+...|..+..+|.+.|++++|...|++..+. . +-+...+..+..+|
T Consensus 2 ~~g~~~~A~~~~~~al~~~--------~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~-p~~~~~~~~l~~~~ 71 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG--------LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-F-PNHQALRVFYAMVL 71 (117)
T ss_dssp -----CCCHHHHHHHHSSC--------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcC--------CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-CCchHHHHHHHHHH
Confidence 4688999999999972221 011335678899999999999999999999999987 2 23467778899999
Q ss_pred HhccCHHHHHHHHHhcccC
Q 036589 98 GRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 98 ~~~g~~~~a~~~~~~m~~~ 116 (176)
.+.|++++|+..|++..+.
T Consensus 72 ~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 72 YNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 9999999999999988753
No 167
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.07 E-value=0.00015 Score=56.16 Aligned_cols=112 Identities=7% Similarity=-0.014 Sum_probs=56.9
Q ss_pred ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----cCChHHHHHHHHHHhhcCCCCCchHHHHHHH
Q 036589 19 QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR----AKMFDEMQQILHQLKHDTRVIPEEIIFCNVI 94 (176)
Q Consensus 19 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li 94 (176)
.+++++|+..|+.. .+.+ +...+..+...|.. .+++++|.+.|++..+. | +...+..|-
T Consensus 56 ~~~~~~A~~~~~~a-~~~~------------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-~---~~~a~~~Lg 118 (490)
T 2xm6_A 56 TKDLTQAMDWFRRA-AEQG------------YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK-G---LPQAQQNLG 118 (490)
T ss_dssp CCCHHHHHHHHHHH-HHTT------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-T---CHHHHHHHH
T ss_pred CcCHHHHHHHHHHH-HHCC------------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-C---CHHHHHHHH
Confidence 55566666666554 2211 34455555555555 55566666666655544 2 333444444
Q ss_pred HHHHh----ccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHh
Q 036589 95 SFYGR----ARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT----CGKLDRMKELFISFNL 150 (176)
Q Consensus 95 ~~~~~----~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~ 150 (176)
..|.. .+++++|+..|++..+.| +...+..|-..|.. .+++++|.+.|++..+
T Consensus 119 ~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~ 179 (490)
T 2xm6_A 119 VMYHEGNGVKVDKAESVKWFRLAAEQG---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAE 179 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 55544 455555555555554433 33444444444444 4455555555555444
No 168
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.07 E-value=3.1e-05 Score=47.72 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=63.6
Q ss_pred HHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHH
Q 036589 69 EMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISF 148 (176)
Q Consensus 69 ~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m 148 (176)
.|...|++..+. -.-+...+..+...|...|++++|+..|++..+.. +.+...|..+-..|...|++++|.+.|++.
T Consensus 3 ~a~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 3 AITERLEAMLAQ--GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-PTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CHHHHHHHHHTT--TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh--CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 355666666654 12345667777788888888888888888776543 234566777778888888888888888877
Q ss_pred HhccccccchHHHHHHHHHhhc
Q 036589 149 NLKAIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 149 ~~~~~~~p~~~t~~~li~~~~~ 170 (176)
.+......+......+...+.+
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~ 101 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRR 101 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHH
Confidence 6543321344445544444443
No 169
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.07 E-value=2.5e-05 Score=50.24 Aligned_cols=126 Identities=10% Similarity=-0.058 Sum_probs=92.0
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC----CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC----CCCc-
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR----VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF----NVQR- 120 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g----~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----~~~p- 120 (176)
...++..+...+...|++++|...+++..+... ......++..+...|...|++++|...|++..+. +..+
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 87 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHH
Confidence 345788888999999999999999998776411 1111257788999999999999999999987632 1111
Q ss_pred cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc----cccccchHHHHHHHHHhhccccCC
Q 036589 121 TVKSLNTLLNALLTCGKLDRMKELFISFNLK----AIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 121 ~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~----~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
....+..+...+...|++++|.+.+++..+. +.......++..+...|...|+++
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 146 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 146 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHH
Confidence 2456778888999999999999999987643 111023556777777777777653
No 170
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.06 E-value=3.2e-05 Score=59.10 Aligned_cols=156 Identities=13% Similarity=0.004 Sum_probs=107.1
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhc-------------------CC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA-------------------KM 66 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~-------------------g~ 66 (176)
+..+..+-..|.+.|++++|+..|++. .+. .+-+...|..+..+|... +.
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~a-l~~----------~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~ 315 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKA-LEY----------IPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLEL 315 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH----------STTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHH-HHh----------CCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 345777888999999999999999997 221 122566777666665432 33
Q ss_pred hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHh--HHHHHHH-HHHhcCcHHHHHH
Q 036589 67 FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVK--SLNTLLN-ALLTCGKLDRMKE 143 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~--~~~~ll~-~~~~~g~~~~a~~ 143 (176)
++.|...+++..+. -..+...+..+...|.+.|++++|+..|++..+....+... .+..+.. .+...|+.++|+.
T Consensus 316 ~~~A~~~~~~a~~~--~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~ 393 (472)
T 4g1t_A 316 IGHAVAHLKKADEA--NDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIH 393 (472)
T ss_dssp HHHHHHHHHHHHHH--CTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred HHHHHHHHHHHhhc--CCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 56777788877765 23345677889999999999999999999987654333221 2222222 2346789999999
Q ss_pred HHHHHHhccc-----------------------cccchHHHHHHHHHhhccccCC
Q 036589 144 LFISFNLKAI-----------------------AVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 144 l~~~m~~~~~-----------------------~~p~~~t~~~li~~~~~~g~~~ 175 (176)
.|.+..+... + .+..+|..|-..|...|+++
T Consensus 394 ~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p-~~~~~~~~LG~~~~~~g~~~ 447 (472)
T 4g1t_A 394 HFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNG-ADSEALHVLAFLQELNEKMQ 447 (472)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC--CTTHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHH
Confidence 8887654321 2 35678888888888887765
No 171
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.06 E-value=6.7e-05 Score=45.42 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
+...|..+...+.+.|++++|...|++..+. . +.+...+..+..+|.+.|++++|+..|++..+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA-Q-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-C-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 5566777777788888888888888887765 1 234566777777888888888888888877654
No 172
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.05 E-value=0.00029 Score=54.50 Aligned_cols=125 Identities=9% Similarity=-0.100 Sum_probs=86.4
Q ss_pred CHHHHHHHHHh----ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----cCChHHHHHHHHHHhh
Q 036589 8 SPFRLASLLHL----QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR----AKMFDEMQQILHQLKH 79 (176)
Q Consensus 8 ~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~ 79 (176)
.+..|-..|.. .+++++|.+.|++. .+.+ +...+..+...|.. .+++++|...|++..+
T Consensus 77 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a-~~~~------------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 77 AEYVLGLRYMNGEGVPQDYAQAVIWYKKA-ALKG------------LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHH-HHTT------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHH-HHCC------------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 34555566666 78888888888887 3321 56667777777777 6788888888888776
Q ss_pred cCCCCCchHHHHHHHHHHHh----ccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHhc
Q 036589 80 DTRVIPEEIIFCNVISFYGR----ARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT----CGKLDRMKELFISFNLK 151 (176)
Q Consensus 80 ~~g~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~~ 151 (176)
. | +...+..|-..|.. .+++++|++.|++..+.| +...+..|-..|.. .++.++|.+.|++..+.
T Consensus 144 ~-~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 144 Q-G---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG---NVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS 216 (490)
T ss_dssp T-T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred C-C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC
Confidence 6 4 34556666666766 667888888887776653 56666666677766 67777777777776654
Q ss_pred c
Q 036589 152 A 152 (176)
Q Consensus 152 ~ 152 (176)
+
T Consensus 217 ~ 217 (490)
T 2xm6_A 217 G 217 (490)
T ss_dssp T
T ss_pred C
Confidence 3
No 173
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.04 E-value=0.00013 Score=63.11 Aligned_cols=134 Identities=13% Similarity=0.047 Sum_probs=90.1
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
..+.+..+|.+.+++++...+.+.. +...|..+...|...|++++|..+|+..
T Consensus 1169 Idt~LafaYAKl~rleele~fI~~~-----------------n~ad~~~iGd~le~eg~YeeA~~~Y~kA---------- 1221 (1630)
T 1xi4_A 1169 VETELIFALAKTNRLAELEEFINGP-----------------NNAHIQQVGDRCYDEKMYDAAKLLYNNV---------- 1221 (1630)
T ss_pred ccHHHHHHHHhhcCHHHHHHHHhCC-----------------CHHHHHHHHHHHHhcCCHHHHHHHHHhh----------
Confidence 3445788888888877544443211 4456666888888888888888888874
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCC------------------------CCccHhHHHHHHHHHHhcCcHHHHHH
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFN------------------------VQRTVKSLNTLLNALLTCGKLDRMKE 143 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~------------------------~~p~~~~~~~ll~~~~~~g~~~~a~~ 143 (176)
..|..+..+|++.|++++|++.+++..+.. +..+...+..++..|.+.|.+++|+.
T Consensus 1222 ~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~ 1301 (1630)
T 1xi4_A 1222 SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELIT 1301 (1630)
T ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHH
Confidence 267778888888888888887776654211 11244456678888888889999888
Q ss_pred HHHHHHhccccccchHHHHHHHHHhhc
Q 036589 144 LFISFNLKAIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 144 l~~~m~~~~~~~p~~~t~~~li~~~~~ 170 (176)
+++.-.... + -....|+-|-..|++
T Consensus 1302 LlE~aL~Le-r-aH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1302 MLEAALGLE-R-AHMGMFTELAILYSK 1326 (1630)
T ss_pred HHHHHhccC-h-hHhHHHHHHHHHHHh
Confidence 887766544 2 355566666655554
No 174
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.04 E-value=8.2e-05 Score=43.31 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
.+..+...+.+.|++++|+..|++..+.. +.+...+..+-..+.+.|++++|.+.|++..+.
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 33444444444555555555554444321 123344444445555555555555555554443
No 175
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.03 E-value=0.00014 Score=48.00 Aligned_cols=114 Identities=12% Similarity=-0.014 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC-----c-----hHHHHHHHHHHHhccCHHHHHHHHHhcccC----
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP-----E-----EIIFCNVISFYGRARLLEHALQVFDEMPSF---- 116 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~-----~-----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~---- 116 (176)
...+......+.+.|++++|...|++..+...-.| + ...|+.+-.++.+.|++++|+..|+...+.
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 44566677888899999999999999887621111 2 238999999999999999999999988864
Q ss_pred -CCCc-cHhHH----HHHHHHHHhcCcHHHHHHHHHHHHh-----ccccccchHHHHHHH
Q 036589 117 -NVQR-TVKSL----NTLLNALLTCGKLDRMKELFISFNL-----KAIAVLDGLCSNLKI 165 (176)
Q Consensus 117 -~~~p-~~~~~----~~ll~~~~~~g~~~~a~~l~~~m~~-----~~~~~p~~~t~~~li 165 (176)
.+.| +...| ...-.++...|++++|+..|++..+ .++. +........+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~-~~~~~~~~~~ 149 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET-PGKERMMEVA 149 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC-TTHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHH-HHHHHHHHHH
Confidence 1134 45667 8888999999999999999999864 3554 4444444333
No 176
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.03 E-value=5.9e-05 Score=55.98 Aligned_cols=154 Identities=11% Similarity=-0.009 Sum_probs=104.1
Q ss_pred HHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC--cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---CC-CCc
Q 036589 13 ASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY--NLLHYDLIITKLGRAKMFDEMQQILHQLKHDT---RV-IPE 86 (176)
Q Consensus 13 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~--~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~---g~-~~~ 86 (176)
-..+...|++++|...+++..... +...+ -...++.+...+...|++++|.+.+++..... +. ...
T Consensus 21 a~~~~~~g~~~~A~~~~~~al~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 21 AQVAINDGNPDEAERLAKLALEEL--------PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTC--------CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHcC--------CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 445667899999999988852221 11111 12356677788889999999999998877531 11 111
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhccc----CCCC--c-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc----cc
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPS----FNVQ--R-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAI----AV 155 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~--p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~----~~ 155 (176)
..+++.+...+...|++++|...+++..+ .+.. | ....+..+-..+...|++++|.+.+++..+... .
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~- 171 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ- 171 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG-
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH-
Confidence 23456778888999999999999987763 2221 2 344566777888999999999999998765322 2
Q ss_pred cchHHHHHHHHHhhccccCC
Q 036589 156 LDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 156 p~~~t~~~li~~~~~~g~~~ 175 (176)
....+|..+...+...|+++
T Consensus 172 ~~~~~~~~la~~~~~~g~~~ 191 (373)
T 1hz4_A 172 QQLQCLAMLIQCSLARGDLD 191 (373)
T ss_dssp GGHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHH
Confidence 12456777777777777654
No 177
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.02 E-value=3e-05 Score=58.30 Aligned_cols=132 Identities=7% Similarity=-0.064 Sum_probs=95.7
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNAND-----TEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
+..+-..+.+.|++++|++.|++....... .........+.+...|..+..+|.+.|++++|...+++..+. .
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~-~- 303 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI-D- 303 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-C-
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh-C-
Confidence 566778889999999999999987220000 000000011225678889999999999999999999999976 2
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHH
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKE 143 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~ 143 (176)
.-+...+..+..+|.+.|++++|+..|++..+.. +-+...+..+...+.+.++.+++.+
T Consensus 304 p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~-P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 304 PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIA-PEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2356788889999999999999999999988653 2256667777777777777776654
No 178
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.01 E-value=4.6e-05 Score=45.97 Aligned_cols=63 Identities=6% Similarity=0.038 Sum_probs=39.4
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
+...|..+..++.+.|++++|...|++..+. . .-+...|..+-.+|.+.|++++|++.|++..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVET-D-PDYVGTYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-S-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-C-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5556666666666677777777777666655 1 1233455666666666677766666666654
No 179
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.00 E-value=8.3e-05 Score=58.00 Aligned_cols=112 Identities=4% Similarity=-0.062 Sum_probs=82.0
Q ss_pred HHhcCChHHHHHHHHHHhhc----CC--CCCchHHHHHHHHHHHhccCHHHHHHHHHhccc-----CC--CCccHhHHHH
Q 036589 61 LGRAKMFDEMQQILHQLKHD----TR--VIPEEIIFCNVISFYGRARLLEHALQVFDEMPS-----FN--VQRTVKSLNT 127 (176)
Q Consensus 61 ~~~~g~~~~a~~~~~~m~~~----~g--~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~-----~~--~~p~~~~~~~ 127 (176)
+...|++++|+.++++..+. .| ..-...+++.|..+|...|++++|+.++++..+ .| .+-...+++.
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45689999999999887654 11 222457889999999999999999998887653 22 2335678999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHh-----ccccccchHHH-HHHHHHhhccc
Q 036589 128 LLNALLTCGKLDRMKELFISFNL-----KAIAVLDGLCS-NLKIIMNDSQV 172 (176)
Q Consensus 128 ll~~~~~~g~~~~a~~l~~~m~~-----~~~~~p~~~t~-~~li~~~~~~g 172 (176)
|-..|...|++++|+.++++..+ .|..+|++..- +.+-.++...+
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 449 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELR 449 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988753 46666665543 34444444433
No 180
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.00 E-value=9.4e-06 Score=49.36 Aligned_cols=89 Identities=8% Similarity=-0.053 Sum_probs=70.7
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccc----hHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLD----GLCS 161 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~----~~t~ 161 (176)
+...+..+...+.+.|++++|+..|++..+.. +.+...|..+-.++.+.|++++|.+.|++..+.....++ ...+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 45677888999999999999999999988653 346788899999999999999999999999876543011 5667
Q ss_pred HHHHHHhhccccCC
Q 036589 162 NLKIIMNDSQVRVT 175 (176)
Q Consensus 162 ~~li~~~~~~g~~~ 175 (176)
..+-.++...|+++
T Consensus 82 ~~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 82 YRLELAQGAVGSVQ 95 (111)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhHh
Confidence 77777777776654
No 181
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.93 E-value=4.6e-05 Score=56.45 Aligned_cols=109 Identities=12% Similarity=0.030 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchH------------------HHHHHHHHHHhccCHHHHHHHHHh
Q 036589 51 LLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEI------------------IFCNVISFYGRARLLEHALQVFDE 112 (176)
Q Consensus 51 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~------------------~~~~li~~~~~~g~~~~a~~~~~~ 112 (176)
...|..+...+.+.|++++|...|++.... .|+.. .|..+..+|.+.|++++|+..|++
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~---~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAY---MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHH---SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHH---hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445777778888999999999999998765 24433 788899999999999999999999
Q ss_pred cccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 113 MPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 113 m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
..+.. +.+...|..+-.+|...|++++|.+.|++..+.... +...+..+.
T Consensus 256 al~~~-p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~--~~~a~~~L~ 305 (338)
T 2if4_A 256 VLTEE-EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPD--DKAIRRELR 305 (338)
T ss_dssp HHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC--CHHHHHHHH
Confidence 88653 346788999999999999999999999998765433 334444433
No 182
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.90 E-value=0.00025 Score=54.37 Aligned_cols=105 Identities=10% Similarity=-0.090 Sum_probs=79.9
Q ss_pred HHHHHHHhcCChHHHHHHHHHHhhcCC------CCCchHHHHHHHHHHHhccCHHHHHHHHHhccc-----CC--CCccH
Q 036589 56 LIITKLGRAKMFDEMQQILHQLKHDTR------VIPEEIIFCNVISFYGRARLLEHALQVFDEMPS-----FN--VQRTV 122 (176)
Q Consensus 56 ~li~~~~~~g~~~~a~~~~~~m~~~~g------~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~-----~~--~~p~~ 122 (176)
..+..+.+.|++++|+.++++..+... ......+++.|..+|...|++++|+.++++..+ .| .+-..
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 345566678999999999998875411 223457889999999999999999999987653 22 23356
Q ss_pred hHHHHHHHHHHhcCcHHHHHHHHHHHHh-----ccccccchHH
Q 036589 123 KSLNTLLNALLTCGKLDRMKELFISFNL-----KAIAVLDGLC 160 (176)
Q Consensus 123 ~~~~~ll~~~~~~g~~~~a~~l~~~m~~-----~~~~~p~~~t 160 (176)
.+++.|-..|...|++++|+.++++..+ .|..+|.+..
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 7799999999999999999999988753 4655555443
No 183
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.0003 Score=53.10 Aligned_cols=162 Identities=7% Similarity=-0.091 Sum_probs=101.2
Q ss_pred HHHHHhccChhHHHHhhcCCCCCCCCCCCCCC--CCC-----CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 13 ASLLHLQKHPKLALQLFKNPNPNANDTEAPPL--KPF-----RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 13 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
.+.+.+.|++++|++.|........ ...... ... ......+..+...|.+.|++++|.+.++......+-.+
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~ 89 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDS-SQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFA 89 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCC-CSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSC
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCc-ccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc
Confidence 4667889999999999988622210 000000 000 00123477889999999999999999998876422222
Q ss_pred ch----HHHHHHHHHHHhccCHHHHHHHHHhccc----CCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc---
Q 036589 86 EE----IIFCNVISFYGRARLLEHALQVFDEMPS----FNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAI--- 153 (176)
Q Consensus 86 ~~----~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~--- 153 (176)
+. .+.+.+-..+...|++++|..++++... .+..+ -..++..+...|...|++++|..++.+....-.
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~ 169 (434)
T 4b4t_Q 90 KSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD 169 (434)
T ss_dssp HHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS
T ss_pred chHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc
Confidence 22 2233333444456788888888876542 22222 245677888888899999999998888753211
Q ss_pred -cccchHHHHHHHHHhhccccCC
Q 036589 154 -AVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 154 -~~p~~~t~~~li~~~~~~g~~~ 175 (176)
..-...+|..+...|...|+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~ 192 (434)
T 4b4t_Q 170 DKPSLVDVHLLESKVYHKLRNLA 192 (434)
T ss_dssp CSTHHHHHHHHHHHHHHHTTCHH
T ss_pred cchhHHHHHHHHHHHHHHhCcHH
Confidence 1023557777777777777653
No 184
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.84 E-value=5.6e-05 Score=54.47 Aligned_cols=96 Identities=5% Similarity=-0.165 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCc
Q 036589 7 TSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPE 86 (176)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~ 86 (176)
..+..+-..+.+.|++++|+..|+..... .+.+...|..+..++.+.|++++|...+++..+. -.-+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--~p~~ 71 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITR-----------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL--DGQS 71 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--CTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCC
Confidence 45667778899999999999999987221 1237888999999999999999999999999876 2345
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 87 EIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 87 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
...+..+..+|...|++++|+..|++..+
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67888899999999999999999988764
No 185
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.83 E-value=0.00012 Score=47.81 Aligned_cols=105 Identities=13% Similarity=-0.003 Sum_probs=78.2
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCC-CCC-------CCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPP-LKP-------FRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD 80 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~ 80 (176)
+...-..+.+.|++++|+..|+....... ..... .+. .+-+...|..+..+|.+.|++++|...++...+.
T Consensus 14 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 14 LRQKGNELFVQKDYKEAIDAYRDALTRLD-TLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 45566788899999999999988621100 00000 000 1224568889999999999999999999999876
Q ss_pred CCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 81 TRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 81 ~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
. +.+...|..+..+|...|++++|+..|++..+.
T Consensus 93 -~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 93 -E-ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp -S-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -C-CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 2 345678888999999999999999999998865
No 186
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.79 E-value=0.00043 Score=40.11 Aligned_cols=82 Identities=10% Similarity=0.060 Sum_probs=64.3
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLL 129 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 129 (176)
+...|..+...+...|++++|...|++..+. . ..+...+..+..+|.+.|++++|+..|++..+.. +.+...+..+-
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~l~ 84 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-D-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-C-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCHHHHHHHH
Confidence 4667888899999999999999999999876 2 2356778889999999999999999999987643 23455555555
Q ss_pred HHHHh
Q 036589 130 NALLT 134 (176)
Q Consensus 130 ~~~~~ 134 (176)
..+.+
T Consensus 85 ~~~~~ 89 (91)
T 1na3_A 85 NAKQK 89 (91)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55544
No 187
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.78 E-value=0.00012 Score=56.28 Aligned_cols=97 Identities=7% Similarity=-0.126 Sum_probs=74.0
Q ss_pred cCChHHHHHHHHHHhhc----CC--CCCchHHHHHHHHHHHhccCHHHHHHHHHhccc-----CC--CCccHhHHHHHHH
Q 036589 64 AKMFDEMQQILHQLKHD----TR--VIPEEIIFCNVISFYGRARLLEHALQVFDEMPS-----FN--VQRTVKSLNTLLN 130 (176)
Q Consensus 64 ~g~~~~a~~~~~~m~~~----~g--~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~-----~~--~~p~~~~~~~ll~ 130 (176)
.|++++|+.++++..+. .| ......+++.|..+|...|++++|+.++++..+ .| .+-...+++.|-.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 57889999999887653 11 223457899999999999999999999988753 22 2335677999999
Q ss_pred HHHhcCcHHHHHHHHHHHHh-----ccccccchHH
Q 036589 131 ALLTCGKLDRMKELFISFNL-----KAIAVLDGLC 160 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~-----~~~~~p~~~t 160 (176)
.|...|++++|+.++++..+ .|..+|++..
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 99999999999999988753 4555555443
No 188
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.76 E-value=0.00034 Score=50.57 Aligned_cols=118 Identities=8% Similarity=-0.058 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc--HhHHHHHHH
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT--VKSLNTLLN 130 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~--~~~~~~ll~ 130 (176)
.+-.....+...|++++|.++|+.+... + |+......+-..+.+.++|++|+..|+...+.. .|. ...+..+-.
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~-~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-d~~~~~~a~~~LG~ 179 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVA-G--SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP-DKFLAGAAGVAHGV 179 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCT-T--CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc-C--CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC-CcccHHHHHHHHHH
Confidence 3444667788999999999999999865 3 544466667778999999999999999665432 121 235677788
Q ss_pred HHHhcCcHHHHHHHHHHHHhcccccc--chHHHHHHHHHhhccccCC
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIAVL--DGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~~p--~~~t~~~li~~~~~~g~~~ 175 (176)
++...|++++|++.|++....... | ........-.++.+.|+.+
T Consensus 180 al~~LG~~~eAl~~l~~a~~g~~~-P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 180 AAANLALFTEAERRLTEANDSPAG-EACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSTTT-TTTHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHCCCHHHHHHHHHHHhcCCCC-ccccHHHHHHHHHHHHHcCCHH
Confidence 999999999999999998765542 3 3335555566666666654
No 189
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.70 E-value=0.00011 Score=56.36 Aligned_cols=100 Identities=8% Similarity=-0.079 Sum_probs=74.6
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CC--CCC
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD----TR--VIP 85 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~----~g--~~~ 85 (176)
.+..+.+.|++++|+.++++...... ....+..+....+++.+...|...|++++|+.++++...- .| ..-
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~---~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~ 369 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNS---ERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV 369 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSS---CCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhcc---CcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH
Confidence 35667788999999998876522211 0112333345678999999999999999999999987643 12 333
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
...+++.|-..|...|++++|+.+|++..
T Consensus 370 ~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 370 RGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 45778999999999999999999998765
No 190
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00041 Score=52.33 Aligned_cols=157 Identities=9% Similarity=0.018 Sum_probs=106.2
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcH----HHHHHHHHHHHhcCChHHHHHHHHHHhhc----
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNL----LHYDLIITKLGRAKMFDEMQQILHQLKHD---- 80 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~----~~y~~li~~~~~~g~~~~a~~~~~~m~~~---- 80 (176)
+..+...|...|++++|.+++....+-. ..+ ++. .+.+.+-..+...|+++.+..+++.....
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~--------~~~-~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYM--------MQF-AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHH--------HTS-CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH--------HHc-cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 5678899999999999999998872211 111 122 22333334444678899999988887643
Q ss_pred CCCCCchHHHHHHHHHHHhccCHHHHHHHHHhccc----CCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc--cc
Q 036589 81 TRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS----FNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLK--AI 153 (176)
Q Consensus 81 ~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~--~~ 153 (176)
.....-..++..+...|...|++++|..++++... .+-.+ ....+..++..|...|++++|..+++..... .+
T Consensus 129 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 129 KRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp SCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred CccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 12223356778899999999999999999987653 11112 3457888999999999999999999887542 22
Q ss_pred ccc-c--hHHHHHHHHHhhccccC
Q 036589 154 AVL-D--GLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 154 ~~p-~--~~t~~~li~~~~~~g~~ 174 (176)
..| . ...+..+...+...|++
T Consensus 209 ~~~~~~~~~~~~~~g~~~~~~~~y 232 (434)
T 4b4t_Q 209 YCPTQTVAELDLMSGILHCEDKDY 232 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhH
Confidence 212 1 34556666666655554
No 191
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.64 E-value=0.00018 Score=46.15 Aligned_cols=115 Identities=12% Similarity=-0.023 Sum_probs=92.1
Q ss_pred hccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHH
Q 036589 18 LQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFY 97 (176)
Q Consensus 18 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~ 97 (176)
-.+++++|++.|++. .+. + .|+.. +-..|...+.+++|.+.|++..+. | +...+..|-..|
T Consensus 7 ~~~d~~~A~~~~~~a-a~~---------g-~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~-g---~~~a~~~Lg~~y 67 (138)
T 1klx_A 7 VKKDLKKAIQYYVKA-CEL---------N-EMFGC----LSLVSNSQINKQKLFQYLSKACEL-N---SGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHH-HHT---------T-CTTHH----HHHHTCTTSCHHHHHHHHHHHHHT-T---CHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHH-HcC---------C-CHhhh----HHHHHHcCCCHHHHHHHHHHHHcC-C---CHHHHHHHHHHH
Confidence 456788999999987 332 2 22333 667777778899999999999887 4 567777788888
Q ss_pred Hh----ccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHhcccc
Q 036589 98 GR----ARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT----CGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 98 ~~----~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~~~~~ 154 (176)
.. .+++++|++.|++..+.| +...+..|-..|.. .+++++|.+.|++..+.|.+
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HcCCCCCccHHHHHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCH
Confidence 88 889999999999998765 56778888888888 89999999999999888764
No 192
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.61 E-value=0.00029 Score=57.08 Aligned_cols=162 Identities=13% Similarity=0.055 Sum_probs=109.1
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC------------cHHHHHHHHHHHHhcCChHHHHHHHH
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY------------NLLHYDLIITKLGRAKMFDEMQQILH 75 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~y~~li~~~~~~g~~~~a~~~~~ 75 (176)
.|-..+....+.|++++|.++|+.+. ..............| ....|-..+....+.|..+.|.++|.
T Consensus 380 Lwl~~a~~ee~~~~~e~aR~iyek~l-~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~ 458 (679)
T 4e6h_A 380 LAFSLSEQYELNTKIPEIETTILSCI-DRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFG 458 (679)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH-HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH-HHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45667788888999999999999872 210000000000012 23468888888888999999999999
Q ss_pred HHhhc-CCCCCchHHHHHHHHHHHhc-cCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 76 QLKHD-TRVIPEEIIFCNVISFYGRA-RLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 76 ~m~~~-~g~~~~~~~~~~li~~~~~~-g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
...+. ....+......+.+. .+. ++.+.|..+|+...+. ++-+...|..++......|+.+.|..+|++......
T Consensus 459 ~A~~~~~~~~~~lyi~~A~lE--~~~~~d~e~Ar~ife~~Lk~-~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 459 KCRRLKKLVTPDIYLENAYIE--YHISKDTKTACKVLELGLKY-FATDGEYINKYLDFLIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHHTGGGSCTHHHHHHHHHH--HTTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSS
T ss_pred HHHHhcCCCChHHHHHHHHHH--HHhCCCHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 99875 223333333333333 334 4589999999988754 344666677888888889999999999999887654
Q ss_pred ccc--chHHHHHHHHHhhccccC
Q 036589 154 AVL--DGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 154 ~~p--~~~t~~~li~~~~~~g~~ 174 (176)
. + ....|...+..-.+.|..
T Consensus 536 ~-~~~~~~lw~~~~~fE~~~G~~ 557 (679)
T 4e6h_A 536 D-SHLLKMIFQKVIFFESKVGSL 557 (679)
T ss_dssp S-TTHHHHHHHHHHHHHHHTCCS
T ss_pred C-HHHHHHHHHHHHHHHHHcCCH
Confidence 2 2 356777777776666654
No 193
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.60 E-value=0.00032 Score=43.00 Aligned_cols=64 Identities=11% Similarity=-0.063 Sum_probs=56.4
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
+...|..+...+...|++++|...|++..+. . ..+...|..+..+|...|++++|...|++..+
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDF-D-PTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHH-C-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6788999999999999999999999999976 2 23466788899999999999999999998874
No 194
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.59 E-value=0.00062 Score=55.18 Aligned_cols=152 Identities=9% Similarity=-0.038 Sum_probs=104.5
Q ss_pred CHHHHHHHHHhccChhHHH-HhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC-----
Q 036589 8 SPFRLASLLHLQKHPKLAL-QLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT----- 81 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~-~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~----- 81 (176)
.|-.....+.+.|+.++|. ++|++.. . ..+.+...|-..+...-+.|++++|.++|+.+....
T Consensus 345 lW~~ya~~~~~~~~~~~a~r~il~rAi-~----------~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~ 413 (679)
T 4e6h_A 345 IWFNMANYQGEKNTDSTVITKYLKLGQ-Q----------CIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLA 413 (679)
T ss_dssp HHHHHHHHHHHHSCCTTHHHHHHHHHH-H----------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHH-H----------hCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 4556667777889999997 9999872 2 223466677778888889999999999999988641
Q ss_pred ---CCCC------------chHHHHHHHHHHHhccCHHHHHHHHHhcccC-CCCccHhHHHHHHHHHHhc-CcHHHHHHH
Q 036589 82 ---RVIP------------EEIIFCNVISFYGRARLLEHALQVFDEMPSF-NVQRTVKSLNTLLNALLTC-GKLDRMKEL 144 (176)
Q Consensus 82 ---g~~~------------~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~-~~~p~~~~~~~ll~~~~~~-g~~~~a~~l 144 (176)
...| ...+|...++...+.|..+.|..+|....+. + ..+...|-.....-.+. ++.+.|..+
T Consensus 414 ~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~-~~~~~lyi~~A~lE~~~~~d~e~Ar~i 492 (679)
T 4e6h_A 414 ALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKK-LVTPDIYLENAYIEYHISKDTKTACKV 492 (679)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGG-GSCTHHHHHHHHHHHTTTSCCHHHHHH
T ss_pred hhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC-CCChHHHHHHHHHHHHhCCCHHHHHHH
Confidence 0013 2346888888888999999999999998764 2 11222333222222333 559999999
Q ss_pred HHHHHhccccccchHHHHHHHHHhhcccc
Q 036589 145 FISFNLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 145 ~~~m~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
|+...+.-. -+..-|...++...+.|+
T Consensus 493 fe~~Lk~~p--~~~~~w~~y~~fe~~~~~ 519 (679)
T 4e6h_A 493 LELGLKYFA--TDGEYINKYLDFLIYVNE 519 (679)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC--CchHHHHHHHHHHHhCCC
Confidence 999887633 355566666665555554
No 195
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.50 E-value=8.8e-05 Score=56.98 Aligned_cols=94 Identities=6% Similarity=-0.025 Sum_probs=68.1
Q ss_pred ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CC--CCCchHHHHH
Q 036589 19 QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD----TR--VIPEEIIFCN 92 (176)
Q Consensus 19 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~----~g--~~~~~~~~~~ 92 (176)
.|++++|+.++++........ ..+..+....+++.+..+|...|++++|+.++++..+- .| ..-...+++.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~---lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 387 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSV---FEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLK 387 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTT---BCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCc---cChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 467888888877641111000 01233335578999999999999999999999987753 23 3334577899
Q ss_pred HHHHHHhccCHHHHHHHHHhccc
Q 036589 93 VISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 93 li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
|-..|...|++++|+.+|++..+
T Consensus 388 La~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 388 LGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccCHHHHHHHHHHHHH
Confidence 99999999999999999987653
No 196
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.47 E-value=0.00092 Score=40.06 Aligned_cols=87 Identities=9% Similarity=-0.114 Sum_probs=69.7
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+...+..+..+|.+.|++++|+..|++..+.. +-+...|..+-.+|...|++++|.+.|++..+.....++......+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~ 84 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETD-PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQ 84 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHH
Confidence 45678889999999999999999999988654 33567889999999999999999999999876543326777777777
Q ss_pred HHhhcccc
Q 036589 166 IMNDSQVR 173 (176)
Q Consensus 166 ~~~~~~g~ 173 (176)
..+.+.+.
T Consensus 85 ~~l~~~~~ 92 (100)
T 3ma5_A 85 DAKLKAEG 92 (100)
T ss_dssp HHHHHHHT
T ss_pred HHHHHccc
Confidence 76665544
No 197
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.40 E-value=0.0032 Score=49.98 Aligned_cols=151 Identities=10% Similarity=-0.115 Sum_probs=118.4
Q ss_pred CHHHHHHHHHhccC----------hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcC--ChHHHHHHHH
Q 036589 8 SPFRLASLLHLQKH----------PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAK--MFDEMQQILH 75 (176)
Q Consensus 8 ~~~~l~~~~~~~~~----------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g--~~~~a~~~~~ 75 (176)
.|+.--..+.+.++ +++++++++.+. .. .+-+..+|+-=.-.+.+.+ +++++.+.++
T Consensus 65 aW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l-~~----------~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~ 133 (567)
T 1dce_A 65 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCL-RV----------NPKSYGTWHHRCWLLSRLPEPNWARELELCA 133 (567)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 56665566666666 899999999983 22 1336778887778888889 6799999999
Q ss_pred HHhhcCCCCCchHHHHHHHHHHHhcc-CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc--------------CcHHH
Q 036589 76 QLKHDTRVIPEEIIFCNVISFYGRAR-LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC--------------GKLDR 140 (176)
Q Consensus 76 ~m~~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~--------------g~~~~ 140 (176)
++.+. -.-+...|+.--.++.+.| .++++++.++++.+.. .-|...|+..-..+.+. +.+++
T Consensus 134 k~l~~--d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~-p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~e 210 (567)
T 1dce_A 134 RFLEA--DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRN-FSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLK 210 (567)
T ss_dssp HHHHH--CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTT-CCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHH
T ss_pred HHHhh--ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHC-CCCccHHHHHHHHHHhhcccccccccccccHHHHHH
Confidence 99987 2457889998888888899 8999999999999765 44778888777776663 56799
Q ss_pred HHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 141 MKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 141 a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
+.+.+.+.....+. |...|..+-..+.+.++.
T Consensus 211 el~~~~~ai~~~P~--~~saW~y~~~ll~~~~~~ 242 (567)
T 1dce_A 211 ELELVQNAFFTDPN--DQSAWFYHRWLLGRAEPH 242 (567)
T ss_dssp HHHHHHHHHHHCSS--CSHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHhhCCC--CccHHHHHHHHHhcCCCc
Confidence 99999998887765 788888888777776663
No 198
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.40 E-value=0.0022 Score=46.92 Aligned_cols=152 Identities=9% Similarity=-0.049 Sum_probs=113.6
Q ss_pred CCCHHHHHHHHHhcc--ChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH----Hhc---CChHHHHHHHHH
Q 036589 6 PTSPFRLASLLHLQK--HPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKL----GRA---KMFDEMQQILHQ 76 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~--~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~----~~~---g~~~~a~~~~~~ 76 (176)
...|+.--..+...+ ++++++++++.+.... + -+..+|+.=-..+ ... ++++++.++++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~n---------P--k~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~ 135 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDN---------E--KNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEA 135 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHC---------T--TCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHC---------c--ccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHH
Confidence 345677777777788 9999999999873221 1 1333444333333 444 789999999999
Q ss_pred HhhcCCCCCchHHHHHHHHHHHhccCHH--HHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc------HHHHHHHHHHH
Q 036589 77 LKHDTRVIPEEIIFCNVISFYGRARLLE--HALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK------LDRMKELFISF 148 (176)
Q Consensus 77 m~~~~g~~~~~~~~~~li~~~~~~g~~~--~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~------~~~a~~l~~~m 148 (176)
+.+. -.-+-..|+.--.++.+.|.++ ++++.++++.+.. ..|-..|+.--..+.+.+. ++++++.++++
T Consensus 136 ~l~~--~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d-~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~a 212 (306)
T 3dra_A 136 MLSS--DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTD-LKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDK 212 (306)
T ss_dssp HHHH--CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHH
T ss_pred HHHh--CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 9976 3557888888888888889888 9999999998655 4477788877666667666 88999999999
Q ss_pred HhccccccchHHHHHHHHHhhcccc
Q 036589 149 NLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 149 ~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
.+..+. |...|+.+-..+.+.|+
T Consensus 213 I~~~p~--n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 213 IVKCPQ--NPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHCSS--CHHHHHHHHHHHHHTTC
T ss_pred HHhCCC--CccHHHHHHHHHHhcCC
Confidence 888776 88888887777777665
No 199
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.38 E-value=0.0038 Score=47.93 Aligned_cols=125 Identities=12% Similarity=0.096 Sum_probs=65.4
Q ss_pred CCCCHHHHHHHHHhcc---ChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhc----CChHHHHHHHHHH
Q 036589 5 KPTSPFRLASLLHLQK---HPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA----KMFDEMQQILHQL 77 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~----g~~~~a~~~~~~m 77 (176)
++..+..|-..|...| +.++|++.|+.. .+.+ .++...+..+...|... +++++|.+.|++.
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~a-a~~g----------~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~a 243 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAG-VSRG----------TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKI 243 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHH-HHTT----------CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHH-HHCC----------CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 3446666667777777 777777777776 2221 23444444455555443 5666666666665
Q ss_pred hhcCCCCCchHHHHHHHHH-H--HhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC-----cHHHHHHHHHHHH
Q 036589 78 KHDTRVIPEEIIFCNVISF-Y--GRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG-----KLDRMKELFISFN 149 (176)
Q Consensus 78 ~~~~g~~~~~~~~~~li~~-~--~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g-----~~~~a~~l~~~m~ 149 (176)
. . | +...+..|-.. | ...+++++|+..|++..+.| +...+..|-..|. .| ++++|.+.|++..
T Consensus 244 a-~-g---~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 244 A-P-G---YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp G-G-G---STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred c-C-C---CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 5 3 2 22233333333 2 23555666666666555443 3444444444444 22 5555555555544
No 200
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.34 E-value=0.0098 Score=45.64 Aligned_cols=122 Identities=11% Similarity=-0.044 Sum_probs=88.5
Q ss_pred HHHHHHHHhc----cChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH-H--HhcCChHHHHHHHHHHhhcCC
Q 036589 10 FRLASLLHLQ----KHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITK-L--GRAKMFDEMQQILHQLKHDTR 82 (176)
Q Consensus 10 ~~l~~~~~~~----~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~-~--~~~g~~~~a~~~~~~m~~~~g 82 (176)
..|-..|... +++++|++.|+... .+ ++..+..+... + ...+++++|.+.|++..+. |
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa--~g------------~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~-g 281 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA--PG------------YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA-D 281 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG--GG------------STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc--CC------------CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC-C
Confidence 4455555443 68899999999882 21 56666667666 4 4688999999999998877 5
Q ss_pred CCCchHHHHHHHHHHHhcc-----CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHh----cCcHHHHHHHHHHHHhccc
Q 036589 83 VIPEEIIFCNVISFYGRAR-----LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLT----CGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~g-----~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~g~~~~a~~l~~~m~~~~~ 153 (176)
+...+..|-..|. .| ++++|+..|++.. . -+...+..|-..|.. ..++++|.+.|+...+.|.
T Consensus 282 ---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-~---g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 353 (452)
T 3e4b_A 282 ---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV-G---REVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQ 353 (452)
T ss_dssp ---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-T---TCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTC
T ss_pred ---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-C---CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhCh
Confidence 5666666777776 55 8999999999887 3 356666777666665 3488999999988877655
Q ss_pred c
Q 036589 154 A 154 (176)
Q Consensus 154 ~ 154 (176)
+
T Consensus 354 ~ 354 (452)
T 3e4b_A 354 N 354 (452)
T ss_dssp T
T ss_pred H
Confidence 3
No 201
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.33 E-value=0.0012 Score=43.48 Aligned_cols=84 Identities=12% Similarity=-0.107 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc-------------HhHHHHHHHHHHhcCcHHHHHHHHHHHHhc---
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT-------------VKSLNTLLNALLTCGKLDRMKELFISFNLK--- 151 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~-------------~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~--- 151 (176)
..+...-..+.+.|++++|+..|++..+.. |+ ...|+.+-.++.+.|++++|+..+++.++.
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~--p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEIS--HTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--TTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--CCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 445667778889999999999999887543 33 238999999999999999999999998876
Q ss_pred ----cccccchHHH----HHHHHHhhccccCC
Q 036589 152 ----AIAVLDGLCS----NLKIIMNDSQVRVT 175 (176)
Q Consensus 152 ----~~~~p~~~t~----~~li~~~~~~g~~~ 175 (176)
... +...| ...-.++...|+++
T Consensus 90 ~~e~~pd--~~~A~~~~~~~rG~aL~~lgr~e 119 (159)
T 2hr2_A 90 RGELNQD--EGKLWISAVYSRALALDGLGRGA 119 (159)
T ss_dssp HCCTTST--HHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cccCCCc--hHHHHHHHHHhHHHHHHHCCCHH
Confidence 443 56777 78888888888765
No 202
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.28 E-value=0.0033 Score=37.02 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=39.5
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCCCchH-HHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 57 IITKLGRAKMFDEMQQILHQLKHDTRVIPEEI-IFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 57 li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~-~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
....+.+.|++++|.+.|++..+. . .-+.. .+..+-.+|.+.|++++|++.|++..+.
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~-~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQT-E-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-C-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH-C-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 345566777788888877777765 1 22334 6666777777778888888777777654
No 203
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.24 E-value=0.0049 Score=45.08 Aligned_cols=149 Identities=9% Similarity=-0.052 Sum_probs=108.0
Q ss_pred CCCCHHHHHHHHHhccChh--HHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC------hHHHHHHHHH
Q 036589 5 KPTSPFRLASLLHLQKHPK--LALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM------FDEMQQILHQ 76 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~--~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~------~~~a~~~~~~ 76 (176)
+...|+.---.+.+.|+++ +++++++.+. +. .+-+-..|+--...+.+.++ ++++.+.+++
T Consensus 143 ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i-~~----------d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~ 211 (306)
T 3dra_A 143 NHHVWSYRKWLVDTFDLHNDAKELSFVDKVI-DT----------DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKD 211 (306)
T ss_dssp CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHH-HH----------CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccChHHHHHHHHHHH-Hh----------CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHH
Confidence 3445666666677778887 8899888873 21 12367777766666666666 8888888888
Q ss_pred HhhcCCCCCchHHHHHHHHHHHhccCHH-HHHHHHHhcccCC--CCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 77 LKHDTRVIPEEIIFCNVISFYGRARLLE-HALQVFDEMPSFN--VQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 77 m~~~~g~~~~~~~~~~li~~~~~~g~~~-~a~~~~~~m~~~~--~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
.... -.-|...|+.+-..+.+.|+.. .+..+.+++.+.+ -..++..+..+...|.+.|+.++|.++++.+.+.--
T Consensus 212 aI~~--~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~~~D 289 (306)
T 3dra_A 212 KIVK--CPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKSKYN 289 (306)
T ss_dssp HHHH--CSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHh--CCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhccC
Confidence 8876 3568889998888888888844 4556777776543 234778899999999999999999999999986322
Q ss_pred cccchHHHHHHHHH
Q 036589 154 AVLDGLCSNLKIIM 167 (176)
Q Consensus 154 ~~p~~~t~~~li~~ 167 (176)
+ ....-|+.....
T Consensus 290 p-ir~~yW~~~~~~ 302 (306)
T 3dra_A 290 P-IRSNFWDYQISK 302 (306)
T ss_dssp G-GGHHHHHHHHHT
T ss_pred h-HHHHHHHHHHhh
Confidence 2 366666655543
No 204
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.19 E-value=0.0021 Score=42.34 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=77.6
Q ss_pred HhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCH----------HHHHHHHHhcccCCCCccHhHHHHHHHH
Q 036589 62 GRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLL----------EHALQVFDEMPSFNVQRTVKSLNTLLNA 131 (176)
Q Consensus 62 ~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~----------~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 131 (176)
.+.+.+++|.+.++...+.. .-+...|+.+-.++...+++ ++|+..|++..+.. +-+...|+.+-.+
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~--P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld-P~~~~A~~~LG~a 89 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSN--PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID-PKKDEAVWCIGNA 89 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC-cCcHHHHHHHHHH
Confidence 46677899999999988772 33666777777788777664 59999999988654 2356788899999
Q ss_pred HHhcC-----------cHHHHHHHHHHHHhccccccchHHHHHHHHHhhc
Q 036589 132 LLTCG-----------KLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 132 ~~~~g-----------~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~ 170 (176)
|...| ++++|++.|++..+. . |+...|..-+....+
T Consensus 90 y~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l--~-P~~~~y~~al~~~~k 136 (158)
T 1zu2_A 90 YTSFAFLTPDETEAKHNFDLATQFFQQAVDE--Q-PDNTHYLKSLEMTAK 136 (158)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--C-TTCHHHHHHHHHHHT
T ss_pred HHHhcccCcchhhhhccHHHHHHHHHHHHHh--C-CCCHHHHHHHHHHHh
Confidence 98764 899999999998775 3 666677666655443
No 205
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.12 E-value=0.0016 Score=38.52 Aligned_cols=61 Identities=16% Similarity=0.037 Sum_probs=51.2
Q ss_pred HHHHHHhccCHHHHHHHHHhcccCCCCccHh-HHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 93 VISFYGRARLLEHALQVFDEMPSFNVQRTVK-SLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 93 li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~-~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
....+.+.|++++|+..|++..+.. +.+.. .+..+-.+|...|++++|.+.|++..+....
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTE-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 4567788999999999999988653 23556 8888899999999999999999999887655
No 206
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.10 E-value=0.0085 Score=44.64 Aligned_cols=149 Identities=11% Similarity=-0.105 Sum_probs=83.1
Q ss_pred CHHHHHHHHHhcc-ChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhc-C-ChHHHHHHHHHHhhcCCCC
Q 036589 8 SPFRLASLLHLQK-HPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRA-K-MFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 8 ~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~-g-~~~~a~~~~~~m~~~~g~~ 84 (176)
.|+.--..+...+ ++++++++++.+... .+-+..+|+.-...+.+. + +++++.++++.+.+. -.
T Consensus 90 aWn~R~~iL~~l~~~l~eEL~~~~~~L~~-----------nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~--dp 156 (349)
T 3q7a_A 90 VWQYRFSLLTSLNKSLEDELRLMNEFAVQ-----------NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP--DP 156 (349)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHT-----------TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS--CT
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHh-----------CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh--CC
Confidence 3444444555555 366666666665211 122455555555555544 4 566666666666654 23
Q ss_pred CchHHHHHHHHHHHhccCHH--------HHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc-------HHHHHHHHHHHH
Q 036589 85 PEEIIFCNVISFYGRARLLE--------HALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK-------LDRMKELFISFN 149 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~--------~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~-------~~~a~~l~~~m~ 149 (176)
-|-..|+.--.++.+.|.++ ++++.++++.+.. ..|...|+.--..+.+.+. ++++++.+++..
T Consensus 157 kNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d-p~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI 235 (349)
T 3q7a_A 157 KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVD-GRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSI 235 (349)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence 35556655544444444444 6666666666543 3366666666666655554 566777777766
Q ss_pred hccccccchHHHHHHHHHhhccc
Q 036589 150 LKAIAVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 150 ~~~~~~p~~~t~~~li~~~~~~g 172 (176)
...+. |...|+.+-..+.+.|
T Consensus 236 ~~~P~--n~SaW~Ylr~Ll~~~~ 256 (349)
T 3q7a_A 236 HLIPH--NVSAWNYLRGFLKHFS 256 (349)
T ss_dssp HHCTT--CHHHHHHHHHHHHHTT
T ss_pred HhCCC--CHHHHHHHHHHHHhcC
Confidence 66554 5666655555554444
No 207
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.07 E-value=0.0088 Score=48.74 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=55.6
Q ss_pred HHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHH
Q 036589 15 LLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVI 94 (176)
Q Consensus 15 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li 94 (176)
.....|++++|+++.+.+. +...|..+...+.+.++++.|++.|..+..- ..+.
T Consensus 661 ~~l~~~~~~~A~~~~~~~~----------------~~~~W~~la~~al~~~~~~~A~~~y~~~~d~----------~~l~ 714 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTDES----------------AEMKWRALGDASLQRFNFKLAIEAFTNAHDL----------ESLF 714 (814)
T ss_dssp HHHHHTCHHHHHHHHTTCC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCH----------HHHH
T ss_pred hhhhcCCHHHHHHHHHhhC----------------cHhHHHHHHHHHHHcCCHHHHHHHHHHccCh----------hhhH
Confidence 3345566666666655551 4667777777778888888888777776543 2333
Q ss_pred HHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHH
Q 036589 95 SFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISF 148 (176)
Q Consensus 95 ~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m 148 (176)
..|...|+.+...++-+.....| -++.-..+|.+.|++++|.+++.++
T Consensus 715 ~l~~~~~~~~~~~~~~~~a~~~~------~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 715 LLHSSFNNKEGLVTLAKDAETTG------KFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTT------CHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHcC------chHHHHHHHHHcCCHHHHHHHHHHc
Confidence 33444444444333333333222 1233334455556666666655554
No 208
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.025 Score=37.81 Aligned_cols=55 Identities=13% Similarity=-0.027 Sum_probs=46.5
Q ss_pred HHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 036589 10 FRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHD 80 (176)
Q Consensus 10 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~ 80 (176)
..-++.-...|+++.|.++-+.+. +...|..|.......|+++-|++.|+....-
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~----------------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLN----------------DSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhC----------------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 344667788999999999988772 6889999999999999999999999988754
No 209
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.85 E-value=0.045 Score=42.64 Aligned_cols=125 Identities=13% Similarity=0.075 Sum_probs=90.3
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.|...++.+.+.++++.|..+|+.. .. ++..+.+....+.+.... .++.+.|..+|+...+..+-.|
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~---------~~~~~~v~i~~A~lE~~~-~~d~~~ar~ife~al~~~~~~~-- 354 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GN---------EGVGPHVFIYCAFIEYYA-TGSRATPYNIFSSGLLKHPDST-- 354 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TT---------SCCCHHHHHHHHHHHHHH-HCCSHHHHHHHHHHHHHCTTCH--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hC---------CCCChHHHHHHHHHHHHH-CCChHHHHHHHHHHHHHCCCCH--
Confidence 3555666777788999999999988 33 222233333333343333 3369999999999988733223
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
..+...++...+.|+.+.|..+|+...+ ....|...+..=...|+.+.+.+++++..+
T Consensus 355 ~~~~~yid~e~~~~~~~~aR~l~er~~k-----~~~lw~~~~~fE~~~G~~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 355 LLKEEFFLFLLRIGDEENARALFKRLEK-----TSRMWDSMIEYEFMVGSMELFRELVDQKMD 412 (493)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHSCC-----BHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3456677778889999999999999852 567788888877888999999999888764
No 210
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.80 E-value=0.029 Score=36.57 Aligned_cols=86 Identities=5% Similarity=-0.026 Sum_probs=63.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhcc---CHHHHHHHHHhcccCCCCc--cHhHHHHHHHHHHhcCcHHH
Q 036589 66 MFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRAR---LLEHALQVFDEMPSFNVQR--TVKSLNTLLNALLTCGKLDR 140 (176)
Q Consensus 66 ~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g---~~~~a~~~~~~m~~~~~~p--~~~~~~~ll~~~~~~g~~~~ 140 (176)
....+++-|.+.... +. ++..+.-.+-.++++.. +.++++.+|++..+.. .| ....+-.|--++.+.|++++
T Consensus 13 ~l~~~~~~y~~e~~~-~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAA-GS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHT-TC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHcc-CC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHH
Confidence 355667777777665 44 55666666888888888 6779999999888654 24 35556666677799999999
Q ss_pred HHHHHHHHHhcccc
Q 036589 141 MKELFISFNLKAIA 154 (176)
Q Consensus 141 a~~l~~~m~~~~~~ 154 (176)
|.+.++.+.+..+.
T Consensus 90 A~~y~~~lL~ieP~ 103 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQ 103 (152)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999876543
No 211
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.67 E-value=0.017 Score=43.23 Aligned_cols=142 Identities=6% Similarity=-0.142 Sum_probs=90.2
Q ss_pred CCCCHHHHHHHHHh-----ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh---cC--ChHHHH---
Q 036589 5 KPTSPFRLASLLHL-----QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR---AK--MFDEMQ--- 71 (176)
Q Consensus 5 ~~~~~~~l~~~~~~-----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~---~g--~~~~a~--- 71 (176)
++..|...+++... ..+..+|..+|++. .+.. ++ ....|..+..+|.- .+ .-....
T Consensus 193 ~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~A-l~lD-------P~---~a~A~A~la~a~~~~~~~~~~~~~~~~~l~ 261 (372)
T 3ly7_A 193 RGALLTNFYQAHDYLLHGDDKSLNRASELLGEI-VQSS-------PE---FTYARAEKALVDIVRHSQHPLDEKQLAALN 261 (372)
T ss_dssp SGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHH-HHHC-------TT---CHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHhC-------CC---CHHHHHHHHHHHHHHhccCCCchhhHHHHH
Confidence 44566666655443 23457899999997 3221 22 34455544444431 11 111111
Q ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 72 QILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 72 ~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
+-++.......-..+..+|..+...+...|++++|+..+++..+.+ |+...|..+-..+.-.|++++|.+.|.+....
T Consensus 262 ~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 262 TEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 1222222211335677788877777777899999999999999876 78777877778889999999999999987765
Q ss_pred cccccchHHHH
Q 036589 152 AIAVLDGLCSN 162 (176)
Q Consensus 152 ~~~~p~~~t~~ 162 (176)
. |...||.
T Consensus 340 ~---P~~~t~~ 347 (372)
T 3ly7_A 340 R---PGANTLY 347 (372)
T ss_dssp S---CSHHHHH
T ss_pred C---CCcChHH
Confidence 4 4444553
No 212
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.59 E-value=0.003 Score=41.54 Aligned_cols=100 Identities=12% Similarity=-0.069 Sum_probs=74.2
Q ss_pred HHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCCh----------HHHHHHHHHHhhcCCCCC
Q 036589 16 LHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMF----------DEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 16 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~----------~~a~~~~~~m~~~~g~~~ 85 (176)
..+.+.+++|.+.++..... -+-+...|..+..++...+++ ++|...|++..+. .|
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l-----------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l---dP 77 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKS-----------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI---DP 77 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH---CT
T ss_pred HHHHhHHHHHHHHHHHHHHH-----------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh---Cc
Confidence 45677888999998886222 123788888888888887765 5999999999876 33
Q ss_pred -chHHHHHHHHHHHhcc-----------CHHHHHHHHHhcccCCCCccHhHHHHHHHH
Q 036589 86 -EEIIFCNVISFYGRAR-----------LLEHALQVFDEMPSFNVQRTVKSLNTLLNA 131 (176)
Q Consensus 86 -~~~~~~~li~~~~~~g-----------~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 131 (176)
+...|..+-.+|...| ++++|++.|++..+. .|+...|..-+..
T Consensus 78 ~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l--~P~~~~y~~al~~ 133 (158)
T 1zu2_A 78 KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLEM 133 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh--CCCCHHHHHHHHH
Confidence 4567888999998774 899999999998865 3776555444443
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.57 E-value=0.12 Score=38.47 Aligned_cols=141 Identities=6% Similarity=-0.029 Sum_probs=103.5
Q ss_pred HhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcC-ChHHHHHHHHHHhhcCCCCCchHHHHHHHH
Q 036589 17 HLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAK-MFDEMQQILHQLKHDTRVIPEEIIFCNVIS 95 (176)
Q Consensus 17 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~~~~~m~~~~g~~~~~~~~~~li~ 95 (176)
.+....++|+++++.+... .+-+..+|+.--..+...| .++++.++++.+... ..-+..+|+.--.
T Consensus 65 ~~~e~se~AL~lt~~~L~~-----------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~--nPKny~aW~hR~w 131 (349)
T 3q7a_A 65 AKEEKSERALELTEIIVRM-----------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ--NLKSYQVWHHRLL 131 (349)
T ss_dssp HTTCCSHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT--TCCCHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHh-----------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--CCCcHHHHHHHHH
Confidence 3344556899999997222 1225667777777777788 599999999999976 3456677887777
Q ss_pred HHHhc-c-CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHH--------HHHHHHHHHHhccccccchHHHHHHH
Q 036589 96 FYGRA-R-LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLD--------RMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 96 ~~~~~-g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~--------~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
.+.+. + ++++++++++.+.+.. +-|...|+----.+.+.|.++ ++++.++++.+..+. |...|+..-
T Consensus 132 lL~~l~~~~~~~EL~~~~k~L~~d-pkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~--N~SAW~~R~ 208 (349)
T 3q7a_A 132 LLDRISPQDPVSEIEYIHGSLLPD-PKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGR--NNSAWGWRW 208 (349)
T ss_dssp HHHHHCCSCCHHHHHHHHHHTSSC-TTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTT--CHHHHHHHH
T ss_pred HHHHhcCCChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCC--CHHHHHHHH
Confidence 77776 7 8899999999999654 447777876555555555555 899999999998776 777887777
Q ss_pred HHhhcccc
Q 036589 166 IMNDSQVR 173 (176)
Q Consensus 166 ~~~~~~g~ 173 (176)
..+.+.++
T Consensus 209 ~lL~~l~~ 216 (349)
T 3q7a_A 209 YLRVSRPG 216 (349)
T ss_dssp HHHTTSTT
T ss_pred HHHHhccc
Confidence 66666554
No 214
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.55 E-value=0.039 Score=33.17 Aligned_cols=66 Identities=8% Similarity=-0.086 Sum_probs=41.4
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC-----CCCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQLKHDT-----RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~-----g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
+...+-.|...+.+.|+++.|...|+...+.. +-.+....+..+..+|.+.|+++.|...+++..+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 44455566677777777777777777665531 1123445566667777777777777777776654
No 215
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.36 E-value=0.072 Score=39.36 Aligned_cols=132 Identities=11% Similarity=-0.093 Sum_probs=99.7
Q ss_pred hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC--hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHh
Q 036589 22 PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM--FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGR 99 (176)
Q Consensus 22 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~--~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~ 99 (176)
+++++.+++.+... .+-+..+|+-=...+.+.++ ++++..+++.+.+. -.-|-..|+.--.++..
T Consensus 90 l~~EL~~~~~~L~~-----------~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~--dprNy~AW~~R~~vl~~ 156 (331)
T 3dss_A 90 VKAELGFLESCLRV-----------NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA--DERNFHCWDYRRFVAAQ 156 (331)
T ss_dssp HHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----------CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 67888988887222 23367777777777777774 89999999999987 35688889888888888
Q ss_pred ccC-HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc--------------CcHHHHHHHHHHHHhccccccchHHHHHH
Q 036589 100 ARL-LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC--------------GKLDRMKELFISFNLKAIAVLDGLCSNLK 164 (176)
Q Consensus 100 ~g~-~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~--------------g~~~~a~~l~~~m~~~~~~~p~~~t~~~l 164 (176)
.|. ++++++.++++.+.. +-|...|+..-..+.+. +.++++++.+.......+. |...|+-+
T Consensus 157 l~~~~~eel~~~~~~I~~~-p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~--d~SaW~Y~ 233 (331)
T 3dss_A 157 AAVAPAEELAFTDSLITRN-FSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPN--DQSAWFYH 233 (331)
T ss_dssp TTCCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTT--CHHHHHHH
T ss_pred hCcCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCC--CHHHHHHH
Confidence 888 699999999998655 45777888766666554 4588999999999887776 77777654
Q ss_pred HHHhh
Q 036589 165 IIMND 169 (176)
Q Consensus 165 i~~~~ 169 (176)
-..+.
T Consensus 234 r~ll~ 238 (331)
T 3dss_A 234 RWLLG 238 (331)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 216
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.20 E-value=0.14 Score=40.58 Aligned_cols=138 Identities=6% Similarity=-0.103 Sum_probs=104.9
Q ss_pred HhccCh-hHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC----------hHHHHHHHHHHhhcCCCCC
Q 036589 17 HLQKHP-KLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM----------FDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 17 ~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~----------~~~a~~~~~~m~~~~g~~~ 85 (176)
.+.|.+ ++|++.++.+... .+-+..+|+.=-.++...|+ ++++.+.++.+.+. -.-
T Consensus 39 ~~~~~~~eeal~~~~~~l~~-----------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~--~pK 105 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGA-----------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--NPK 105 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--CTT
T ss_pred HHcCCCCHHHHHHHHHHHHH-----------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--CCC
Confidence 344544 4678888887221 12245667666666666666 89999999999987 244
Q ss_pred chHHHHHHHHHHHhcc--CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC-cHHHHHHHHHHHHhccccccchHHHH
Q 036589 86 EEIIFCNVISFYGRAR--LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG-KLDRMKELFISFNLKAIAVLDGLCSN 162 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g-~~~~a~~l~~~m~~~~~~~p~~~t~~ 162 (176)
+...|+.--.++.+.| +++++++.++++.+.. ..|..+|+.---.+.+.| .++++.+.++++.+..+. +...|+
T Consensus 106 ~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d-~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~--n~saW~ 182 (567)
T 1dce_A 106 SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS--NYSSWH 182 (567)
T ss_dssp CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC--CHHHHH
T ss_pred CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc-cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC--CccHHH
Confidence 6778888888888999 7899999999999765 458888988888888888 899999999999988776 777777
Q ss_pred HHHHHhhc
Q 036589 163 LKIIMNDS 170 (176)
Q Consensus 163 ~li~~~~~ 170 (176)
..-..+.+
T Consensus 183 ~r~~ll~~ 190 (567)
T 1dce_A 183 YRSCLLPQ 190 (567)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666554
No 217
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.19 E-value=0.082 Score=31.20 Aligned_cols=66 Identities=12% Similarity=-0.049 Sum_probs=39.6
Q ss_pred CcHHHHHHHHHHHHhcCC---hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 49 YNLLHYDLIITKLGRAKM---FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 49 ~~~~~y~~li~~~~~~g~---~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
.++..+..+..++...++ .++|..++++..+.. .-+......+-..+.+.|++++|+..|+.+.+.
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d--p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE--PYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC--cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 455566666666654433 567777777766551 223344455566666777777777777776644
No 218
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.09 E-value=0.048 Score=32.72 Aligned_cols=69 Identities=13% Similarity=-0.055 Sum_probs=55.3
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccC------CCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSF------NVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~------~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
+..-...|-..+.+.|++..|...|+...+. .-.+....+..|..++.+.|++++|..++++..+..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 3444556888999999999999999886642 12346778899999999999999999999999876544
No 219
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=96.04 E-value=0.15 Score=32.78 Aligned_cols=134 Identities=13% Similarity=0.038 Sum_probs=97.1
Q ss_pred CCHHHHHHHH--HhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 7 TSPFRLASLL--HLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 7 ~~~~~l~~~~--~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
.+...||++- .-.|.+++..+++.+..+.. +..-||.+|--....-+-+-..++++.+-+...+.
T Consensus 6 el~kkLmeAK~~ildG~v~qGveii~k~~~ss-------------ni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis 72 (172)
T 1wy6_A 6 EIIRKLMDAKKFLLDGYIDEGVKIVLEITKSS-------------TKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLD 72 (172)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-------------CHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGG
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHcCCC-------------CccccceeeeecchhhchhHHHHHHHHHhhhcCcH
Confidence 3445566654 34688999999998873222 56778888877777777777777777766553322
Q ss_pred C----------------chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHH
Q 036589 85 P----------------EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISF 148 (176)
Q Consensus 85 ~----------------~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m 148 (176)
+ +...+..-+..+...|.-++-..++..+.. +.+|++...-.+-.+|.+.|+..+|.+++.+.
T Consensus 73 ~C~NlKrVi~C~~~~n~~se~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~A 151 (172)
T 1wy6_A 73 KCQNLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVGDERDATTLLIEA 151 (172)
T ss_dssp GCSCTHHHHHHHHHTTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhcHHHHHHHHHHhcchHHHHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 2 223344456777777888888888888543 34688888889999999999999999999999
Q ss_pred Hhcccc
Q 036589 149 NLKAIA 154 (176)
Q Consensus 149 ~~~~~~ 154 (176)
-+.|++
T Consensus 152 C~kG~k 157 (172)
T 1wy6_A 152 CKKGEK 157 (172)
T ss_dssp HHTTCH
T ss_pred HHhhhH
Confidence 999886
No 220
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.82 E-value=0.064 Score=33.96 Aligned_cols=90 Identities=9% Similarity=-0.058 Sum_probs=73.6
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHh----cCChHHHHHHHHHHhhcCCCCCch
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGR----AKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
|-..|...+.+++|++.|+.. .+.+ ++..+..|-..|.. .+++++|.+.|++..+. | +.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~A-a~~g------------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-g---~~ 93 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKA-CELN------------SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-N---DQ 93 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHH-HHTT------------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-T---CH
T ss_pred HHHHHHcCCCHHHHHHHHHHH-HcCC------------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-C---CH
Confidence 555566667788899999997 3422 78888889999988 89999999999999887 4 46
Q ss_pred HHHHHHHHHHHh----ccCHHHHHHHHHhcccCCC
Q 036589 88 IIFCNVISFYGR----ARLLEHALQVFDEMPSFNV 118 (176)
Q Consensus 88 ~~~~~li~~~~~----~g~~~~a~~~~~~m~~~~~ 118 (176)
..+..|-..|.. .+++++|...|++..+.|.
T Consensus 94 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 94 DGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 667778888888 8999999999999887763
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.77 E-value=0.18 Score=31.68 Aligned_cols=106 Identities=7% Similarity=-0.018 Sum_probs=71.7
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHH---HHHHHHhcccCCCCc--cHhHHHHHHHH
Q 036589 57 IITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEH---ALQVFDEMPSFNVQR--TVKSLNTLLNA 131 (176)
Q Consensus 57 li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~---a~~~~~~m~~~~~~p--~~~~~~~ll~~ 131 (176)
++..-.....+..+++-|+..... |. ++..+--.+..++.+.....+ ++.+++++...+ .| .....-.|--+
T Consensus 7 ~l~~~~~~~~l~~~~~~y~~e~~~-~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg 83 (126)
T 1nzn_A 7 VLNELVSVEDLLKFEKKFQSEKAA-GS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVG 83 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHHHHHhcc-CC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHH
Confidence 334444455566777777777665 44 444444458888888887665 999999988654 23 44455566688
Q ss_pred HHhcCcHHHHHHHHHHHHhccccccchHHHHHHH
Q 036589 132 LLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKI 165 (176)
Q Consensus 132 ~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li 165 (176)
+.+.|++++|.+.++.+.+..+..+...+-..+|
T Consensus 84 ~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 84 NYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 8999999999999999988655422344433333
No 222
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.75 E-value=0.22 Score=36.14 Aligned_cols=113 Identities=12% Similarity=-0.018 Sum_probs=80.7
Q ss_pred CcHHHHHHHHHHH-Hhc--CC------hHHHHHHHHHHhhcCCCCCc---hHHHHHHHHHHHhc-----cCHHHHHHHHH
Q 036589 49 YNLLHYDLIITKL-GRA--KM------FDEMQQILHQLKHDTRVIPE---EIIFCNVISFYGRA-----RLLEHALQVFD 111 (176)
Q Consensus 49 ~~~~~y~~li~~~-~~~--g~------~~~a~~~~~~m~~~~g~~~~---~~~~~~li~~~~~~-----g~~~~a~~~~~ 111 (176)
+....|..++.+- ... |. ...|...+++..+- .|+ -..|..+...|.+. |+.++|.++|+
T Consensus 152 ve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL---DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fe 228 (301)
T 3u64_A 152 VGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL---WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFE 228 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH---CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh---CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHH
Confidence 3555666666533 332 32 45666677777655 454 67888899999994 99999999999
Q ss_pred hcccCCCCccHhHHHHHHHHHHhc-CcHHHHHHHHHHHHhccccc-cchHHHHHH
Q 036589 112 EMPSFNVQRTVKSLNTLLNALLTC-GKLDRMKELFISFNLKAIAV-LDGLCSNLK 164 (176)
Q Consensus 112 ~m~~~~~~p~~~~~~~ll~~~~~~-g~~~~a~~l~~~m~~~~~~~-p~~~t~~~l 164 (176)
+..+.+-.-+..++..+...++.. |+.+++.+.+++.....+.. |+....|.+
T Consensus 229 rAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~ 283 (301)
T 3u64_A 229 HLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVIL 283 (301)
T ss_dssp HHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHH
T ss_pred HHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHH
Confidence 998765212478888888999885 99999999999998865542 555555544
No 223
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.39 E-value=0.2 Score=40.79 Aligned_cols=101 Identities=15% Similarity=0.081 Sum_probs=56.1
Q ss_pred HHHHHhccChhHHHH-hhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHH
Q 036589 13 ASLLHLQKHPKLALQ-LFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFC 91 (176)
Q Consensus 13 ~~~~~~~~~~~~A~~-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~ 91 (176)
.......+++++|.+ ++..+ + +......++..+.+.|..++|.++.++-..
T Consensus 606 ~~~~~~~~~~~~a~~~~l~~i-~---------------~~~~~~~~~~~l~~~~~~~~a~~~~~~~~~------------ 657 (814)
T 3mkq_A 606 FQTLTLRGEIEEAIENVLPNV-E---------------GKDSLTKIARFLEGQEYYEEALNISPDQDQ------------ 657 (814)
T ss_dssp HHHHHHTTCHHHHHHHTGGGC-C---------------CHHHHHHHHHHHHHTTCHHHHHHHCCCHHH------------
T ss_pred HhHHHHhCCHHHHHHHHHhcC-C---------------chHHHHHHHHHHHhCCChHHheecCCCcch------------
Confidence 344455788888888 76655 2 022236677777777777777654421111
Q ss_pred HHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHH
Q 036589 92 NVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISF 148 (176)
Q Consensus 92 ~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m 148 (176)
-.......|++++|.++.+.+. +...|..+-..+.+.|+++.|++.|..+
T Consensus 658 -~f~~~l~~~~~~~A~~~~~~~~------~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 658 -KFELALKVGQLTLARDLLTDES------AEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp -HHHHHHHHTCHHHHHHHHTTCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -heehhhhcCCHHHHHHHHHhhC------cHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 0122334556666655554443 3455555556666666666665555554
No 224
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.36 E-value=0.2 Score=29.46 Aligned_cols=68 Identities=3% Similarity=-0.031 Sum_probs=52.2
Q ss_pred CchHHHHHHHHHHHhccC---HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 85 PEEIIFCNVISFYGRARL---LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~---~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
.+...+..+..++...++ .++|..+|++..+.. +-+......+-..+.+.|++++|.+.|+.+.+...
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d-p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE-PYNEAALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 455566666677755554 799999999988654 33566677777899999999999999999987644
No 225
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.35 E-value=0.11 Score=38.94 Aligned_cols=74 Identities=9% Similarity=-0.023 Sum_probs=62.1
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHH
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLN 126 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~ 126 (176)
+.+...|..+...+...|++++|...+++.... . |+...|..+-..+.-.|++++|.+.|++....+ |...+|.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L-n--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~--P~~~t~~ 347 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDL-E--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNLR--PGANTLY 347 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-C--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CSHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc-C--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CCcChHH
Confidence 457888988888888889999999999999988 4 788888888889999999999999999887653 6665543
No 226
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.13 E-value=0.12 Score=38.89 Aligned_cols=115 Identities=9% Similarity=-0.036 Sum_probs=81.1
Q ss_pred CCCcHHHHHHHHHHHH---hcCChHHHHHHHHHHhhcC-C-CCCch------------------HHHHHHHHHHHhccCH
Q 036589 47 FRYNLLHYDLIITKLG---RAKMFDEMQQILHQLKHDT-R-VIPEE------------------IIFCNVISFYGRARLL 103 (176)
Q Consensus 47 ~~~~~~~y~~li~~~~---~~g~~~~a~~~~~~m~~~~-g-~~~~~------------------~~~~~li~~~~~~g~~ 103 (176)
...|...|..++.... ..|+.+.|.+.+.+..... | +-++. .....++.++.+.|++
T Consensus 108 ~~~D~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~ 187 (388)
T 2ff4_A 108 NTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRA 187 (388)
T ss_dssp GGBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 3456666766665443 3578888888887776542 2 22221 1112356777789999
Q ss_pred HHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHH-----hccccccchHHHHH
Q 036589 104 EHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFN-----LKAIAVLDGLCSNL 163 (176)
Q Consensus 104 ~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~-----~~~~~~p~~~t~~~ 163 (176)
++++..++.+.... +.+...|-.+|.++.+.|+..+|++.|+... +.|+. |+..+-..
T Consensus 188 ~~a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~-P~~~l~~l 250 (388)
T 2ff4_A 188 SAVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGID-PGPTLRAL 250 (388)
T ss_dssp HHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCC-CCHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHH
Confidence 99999988887443 4578899999999999999999999998875 46888 88766443
No 227
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=95.11 E-value=0.2 Score=30.18 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 69 EMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 69 ~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
++++-++.+... ...|......+.+++|.|..++..|+++|+..+
T Consensus 28 e~rrglN~l~~~-DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK 72 (109)
T 1v54_E 28 ELRKGMNTLVGY-DLVPEPKIIDAALRACRRLNDFASAVRILEVVK 72 (109)
T ss_dssp HHHHHHHHHTTS-SBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc-ccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 344444444444 444555555555555555555555555554444
No 228
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.04 E-value=0.13 Score=38.77 Aligned_cols=71 Identities=10% Similarity=0.010 Sum_probs=58.0
Q ss_pred HHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc-----cCCCCccHhHHHHH
Q 036589 56 LIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP-----SFNVQRTVKSLNTL 128 (176)
Q Consensus 56 ~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~-----~~~~~p~~~~~~~l 128 (176)
.++..+...|+++++...+..+... ...+...+..+|.+|.+.|+..+|++.|+... +.|+.|+..+-...
T Consensus 176 ~~~~~~l~~g~~~~a~~~l~~~~~~--~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~ 251 (388)
T 2ff4_A 176 AKAEAEIACGRASAVIAELEALTFE--HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALN 251 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 4456666789999999999988866 45688899999999999999999999999865 46999987754433
No 229
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.71 E-value=0.74 Score=39.69 Aligned_cols=147 Identities=11% Similarity=-0.013 Sum_probs=92.9
Q ss_pred HHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC------
Q 036589 10 FRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV------ 83 (176)
Q Consensus 10 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~------ 83 (176)
..++..+...+.++.|.++.... +. ++..--.+..++...|++++|.+.|++.....+.
T Consensus 816 ~~l~~~l~~~~~~~~~~~l~~~~-~~--------------~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~ 880 (1139)
T 4fhn_B 816 TELVEKLFLFKQYNACMQLIGWL-NS--------------DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFA 880 (1139)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHS-CC--------------CHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCS
T ss_pred HHHHHHHHHhhhHHHHHHHhhhc-cC--------------CcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhh
Confidence 34666777788888888877766 33 3444445667777888899988888765322000
Q ss_pred ---------------CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC--CCcc--HhHHHHHHHHHHhcCcHHHHHHH
Q 036589 84 ---------------IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN--VQRT--VKSLNTLLNALLTCGKLDRMKEL 144 (176)
Q Consensus 84 ---------------~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~--~~p~--~~~~~~ll~~~~~~g~~~~a~~l 144 (176)
..-..-|..++..+.+.+.++.++++-+...+.. -.++ ...|..+.+++...|++++|...
T Consensus 881 ~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~a 960 (1139)
T 4fhn_B 881 VLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVA 960 (1139)
T ss_dssp SHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHH
T ss_pred hhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 0011235667777777788777776655443211 1122 22578888888888999988888
Q ss_pred HHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 145 FISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 145 ~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
+-.+...... ......||...|..|++
T Consensus 961 L~~~pd~~~r---~~cLr~LV~~lce~~~~ 987 (1139)
T 4fhn_B 961 LMVLSTTPLK---KSCLLDFVNQLTKQGKI 987 (1139)
T ss_dssp HHHHHHSSSC---HHHHHHHHHHHHHHCCH
T ss_pred HHhCCCHHHH---HHHHHHHHHHHHhCCCh
Confidence 8777654332 45666777777766654
No 230
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=94.68 E-value=0.91 Score=33.46 Aligned_cols=140 Identities=6% Similarity=-0.102 Sum_probs=99.2
Q ss_pred HHHhccChh-HHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC----------hHHHHHHHHHHhhcCCC
Q 036589 15 LLHLQKHPK-LALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM----------FDEMQQILHQLKHDTRV 83 (176)
Q Consensus 15 ~~~~~~~~~-~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~----------~~~a~~~~~~m~~~~g~ 83 (176)
...+.|.++ +|+++++.+ ... .+-+..+|+.=-..+...+. ++++..+++.+... .
T Consensus 38 ~~~~~~e~s~eaL~~t~~~-L~~----------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~--~ 104 (331)
T 3dss_A 38 QKRQAGELDESVLELTSQI-LGA----------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--N 104 (331)
T ss_dssp HHHHTTCCSHHHHHHHHHH-HTT----------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--C
T ss_pred HHHHcCCCCHHHHHHHHHH-HHH----------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--C
Confidence 344567776 789999997 221 11234445543333333332 67888999998876 3
Q ss_pred CCchHHHHHHHHHHHhcc--CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc-HHHHHHHHHHHHhccccccchHH
Q 036589 84 IPEEIIFCNVISFYGRAR--LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK-LDRMKELFISFNLKAIAVLDGLC 160 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~-~~~a~~l~~~m~~~~~~~p~~~t 160 (176)
+-+..+|+.--..+.+.| .+++++.+++.+.+.. +-|..+|+.---.+.+.|. ++++++.+..+.+..+. |...
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d-prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~--N~SA 181 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS--NYSS 181 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC--CHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC--CHHH
Confidence 457778888777777888 4899999999999655 4588888877777778888 69999999999998876 7777
Q ss_pred HHHHHHHhhc
Q 036589 161 SNLKIIMNDS 170 (176)
Q Consensus 161 ~~~li~~~~~ 170 (176)
|+..-..+.+
T Consensus 182 W~~R~~ll~~ 191 (331)
T 3dss_A 182 WHYRSCLLPQ 191 (331)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7665555443
No 231
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.48 E-value=0.51 Score=36.68 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhcc-CHHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 52 LHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRAR-LLEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 52 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
..|-..+....+.+.++.|..+|+.. +..+ .+...|......-...+ +.+.|..+|+...+.- .-+...|...++
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~--~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~-~~~~~~~~~yid 362 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GNEG--VGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH-PDSTLLKEEFFL 362 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TTSC--CCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hCCC--CChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC-CCCHHHHHHHHH
Confidence 34555566666678899999999999 3312 23344432222222234 6999999999877532 123445677888
Q ss_pred HHHhcCcHHHHHHHHHHH
Q 036589 131 ALLTCGKLDRMKELFISF 148 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m 148 (176)
...+.|+.+.|..+|+..
T Consensus 363 ~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 363 FLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHTCHHHHHHHHHHS
T ss_pred HHHHcCCHHHHHHHHHHH
Confidence 888899999999888875
No 232
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=94.30 E-value=0.44 Score=30.62 Aligned_cols=84 Identities=11% Similarity=-0.041 Sum_probs=66.4
Q ss_pred ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHH
Q 036589 19 QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYG 98 (176)
Q Consensus 19 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~ 98 (176)
+|++......+-.+ .. +....+..++.+...|.-++..+++.++... -+|+....-.+..+|.
T Consensus 74 C~NlKrVi~C~~~~-n~--------------~se~vd~ALd~lv~~~KkDqLdki~~~~l~n--~~~~~~~l~kia~Ay~ 136 (172)
T 1wy6_A 74 CQNLKSVVECGVIN-NT--------------LNEHVNKALDILVIQGKRDKLEEIGREILKN--NEVSASILVAIANALR 136 (172)
T ss_dssp CSCTHHHHHHHHHT-TC--------------CCHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCSCHHHHHHHHHHHH
T ss_pred hhcHHHHHHHHHHh-cc--------------hHHHHHHHHHHHHHhccHhHHHHHHHHHhcc--CCCChHHHHHHHHHHH
Confidence 55666666666666 22 4566788899999999999999999996544 4677778888999999
Q ss_pred hccCHHHHHHHHHhcccCCCC
Q 036589 99 RARLLEHALQVFDEMPSFNVQ 119 (176)
Q Consensus 99 ~~g~~~~a~~~~~~m~~~~~~ 119 (176)
+.|+..+|.+++.+.=+.|++
T Consensus 137 Klg~~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 137 RVGDERDATTLLIEACKKGEK 157 (172)
T ss_dssp HTTCHHHHHHHHHHHHHTTCH
T ss_pred HhcchhhHHHHHHHHHHhhhH
Confidence 999999999999988777754
No 233
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=93.97 E-value=0.17 Score=32.88 Aligned_cols=66 Identities=14% Similarity=-0.079 Sum_probs=53.2
Q ss_pred CcHHHHHHHHHHHHhcC---ChHHHHHHHHHHhhcCCCCC--chHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 49 YNLLHYDLIITKLGRAK---MFDEMQQILHQLKHDTRVIP--EEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 49 ~~~~~y~~li~~~~~~g---~~~~a~~~~~~m~~~~g~~~--~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
++..+.-.+..++++.+ +++++..++++..+. . .| ....+-.|--+|.+.|++++|.+.++.+.+.
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-~-~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-G-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-S-CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-C-CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 57777777888888888 777999999999988 4 23 3444455788889999999999999999864
No 234
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.70 E-value=0.16 Score=33.01 Aligned_cols=107 Identities=8% Similarity=0.062 Sum_probs=64.6
Q ss_pred CCCCCCCCHHHHHHHHHhccCh------hHHHHhhcCCCCCCCCCCCCCCCCCCCc----HHHHHHHHHHH---HhcCCh
Q 036589 1 MNKAKPTSPFRLASLLHLQKHP------KLALQLFKNPNPNANDTEAPPLKPFRYN----LLHYDLIITKL---GRAKMF 67 (176)
Q Consensus 1 ~~~p~~~~~~~l~~~~~~~~~~------~~A~~~~~~~~~~~~~~~~~~~~~~~~~----~~~y~~li~~~---~~~g~~ 67 (176)
|+.-|+.+|-..+..+-+.|++ ++..++|++.. . .++|+ -..|--+---| ...++.
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAi-a----------~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~ 76 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAI-E----------ALPPDKYGQNESFARIQVRFAELKAIQEP 76 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHH-H----------HSCGGGGTTCHHHHHHHHHHHHHHHHHCG
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHH-H----------cCCccccccHHHHHHHHHHHHHHHHhcCH
Confidence 3455667888888888888998 77778888762 2 22222 11222121111 134677
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR 120 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p 120 (176)
++|.++|+.+.+. +-+. ...|-.-.+.=.+.|++..|.+++......+.+|
T Consensus 77 d~aR~vy~~a~~~-hKkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 77 DDARDYFQMARAN-CKKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp GGCHHHHHHHHHH-CTTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc
Confidence 7778888777654 3333 5566656666666777777777777776655443
No 235
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.70 E-value=0.89 Score=29.61 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=80.3
Q ss_pred cHHHHHHHHHHHHhcCCh------HHHHHHHHHHhhcCCCCCchHH----HHHHH---HHHHhccCHHHHHHHHHhcccC
Q 036589 50 NLLHYDLIITKLGRAKMF------DEMQQILHQLKHDTRVIPEEII----FCNVI---SFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~------~~a~~~~~~m~~~~g~~~~~~~----~~~li---~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
|..+|=..+.-.-+.|+. ++..++|++.... ++|+... |--|- ..+...++.++|.++|+.+.+.
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~--~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~ 89 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEA--LPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN 89 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHH--SCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHc--CCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 677787788888888999 8999999988876 4554311 11111 1113458899999999999765
Q ss_pred CCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHh
Q 036589 117 NVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMN 168 (176)
Q Consensus 117 ~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~ 168 (176)
.-.. ...|-....-=.+.|++++|.+++......+.. +.....+.|..+
T Consensus 90 hKkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k--~~~~le~a~~nl 138 (161)
T 4h7y_A 90 CKKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERGAV--PLEMLEIALRNL 138 (161)
T ss_dssp CTTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB--CHHHHHHHHHHH
T ss_pred hHHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC--cHHHHHHHHHhh
Confidence 3233 666666667678899999999999999988876 445555555443
No 236
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=93.27 E-value=0.0029 Score=49.24 Aligned_cols=143 Identities=10% Similarity=0.033 Sum_probs=107.4
Q ss_pred CCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCC
Q 036589 5 KPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVI 84 (176)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~ 84 (176)
.+..|+.|-.+....+++.+|++-|-+. . |+..|..+|.+..+.|.+++..+.++..++. .-.
T Consensus 53 ~p~VWs~LgkAqL~~~~v~eAIdsyIkA-~---------------Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~-~ke 115 (624)
T 3lvg_A 53 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-D---------------DPSSYMEVVQAANTSGNWEELVKYLQMARKK-ARE 115 (624)
T ss_dssp CCCCSSSHHHHTTTSSSCTTTTTSSCCC-S---------------CCCSSSHHHHHTTTSSCCTTHHHHHHTTSTT-CCS
T ss_pred CccHHHHHHHHHHccCchHHHHHHHHhC-C---------------ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-hcc
Confidence 4567888999999999999998877666 1 5667888999999999999999999887766 333
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh--------------
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNL-------------- 150 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~-------------- 150 (176)
| ..=+.|+.+|++.+++.+ |.+.=-.||..-...+-+-|...|.++.|.-+|.....
T Consensus 116 ~--~IDteLi~ayAk~~rL~e-------lEefl~~~N~A~iq~VGDrcf~e~lYeAAKilys~isN~akLAstLV~L~~y 186 (624)
T 3lvg_A 116 S--YVETELIFALAKTNRLAE-------LEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEY 186 (624)
T ss_dssp T--TTTHHHHHHHHTSCSSST-------TTSTTSCCSSSCTHHHHHHHHHSCCSTTSSTTGGGSCCCTTTSSSSSSCSGG
T ss_pred c--ccHHHHHHHHHhhCcHHH-------HHHHHcCCCcccHHHHHHHHHHccCHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 3 444789999999999654 33332347777777888888888888888777755421
Q ss_pred ------ccccccchHHHHHHHHHhhccccC
Q 036589 151 ------KAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 151 ------~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
..-. -++.||-.+-.+|...+.+
T Consensus 187 q~AVdaArKA-ns~ktWKeV~~ACvd~~Ef 215 (624)
T 3lvg_A 187 QAAVDGARKA-NSTRTWKEVCFACVDGKEF 215 (624)
T ss_dssp GSSTTTTTTC-CSSCSHHHHTHHHHHSCTT
T ss_pred HHHHHHHHhc-CChhHHHHHHHHHhCchHH
Confidence 1112 5678898888888887765
No 237
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=93.07 E-value=0.74 Score=29.33 Aligned_cols=61 Identities=10% Similarity=0.005 Sum_probs=39.8
Q ss_pred HHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHH
Q 036589 105 HALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIM 167 (176)
Q Consensus 105 ~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~ 167 (176)
+..+-++.+....+.|++.....-|++|.+.+++..|.++|+..+.+.- +...+|..+++-
T Consensus 71 ElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K~~--~~~~iY~y~lqE 131 (152)
T 2y69_E 71 ELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAG--PHKEIYPYVIQE 131 (152)
T ss_dssp HHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT--TCTTHHHHHHHH
T ss_pred HHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC--CchhhHHHHHHH
Confidence 4445555556666777777777777777777777777777777655432 345556666553
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.48 E-value=1.7 Score=35.79 Aligned_cols=120 Identities=11% Similarity=-0.003 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhcCC-hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC-HHHHHHHHHhcccC------CCCc-cHh
Q 036589 53 HYDLIITKLGRAKM-FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL-LEHALQVFDEMPSF------NVQR-TVK 123 (176)
Q Consensus 53 ~y~~li~~~~~~g~-~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~-~~~a~~~~~~m~~~------~~~p-~~~ 123 (176)
--..++..+...++ .+.|..+++++... ....+......++..+...++ --+|++++.+..+. ...+ +..
T Consensus 250 L~~~Ll~~~~~t~~~~~~a~~~le~L~~~-~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~ 328 (754)
T 4gns_B 250 LMYSLKSFIAITPSLVDFTIDYLKGLTKK-DPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDAD 328 (754)
T ss_dssp HHHHHHHHHHTCGGGHHHHHHHHHHHHHH-CGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHH
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHhh-CCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 34556666666666 57899999999887 332233223334444333332 22444444433210 0111 110
Q ss_pred ---HH---HHHH----HHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 124 ---SL---NTLL----NALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 124 ---~~---~~ll----~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
.. ..|| .-|...|+++-|+++-++....-+. +-.||-.|..+|...|+++
T Consensus 329 ~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs--eF~tW~~La~vYi~l~d~e 388 (754)
T 4gns_B 329 SARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALD--SFESWYNLARCHIKKEEYE 388 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS--CHHHHHHHHHHHHHTTCHH
T ss_pred cccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCch--hhHHHHHHHHHHHHhccHH
Confidence 01 1233 3455689999999999998776554 7889999999999999875
No 239
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=92.28 E-value=0.69 Score=27.86 Aligned_cols=64 Identities=9% Similarity=-0.031 Sum_probs=50.8
Q ss_pred CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHH
Q 036589 102 LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIM 167 (176)
Q Consensus 102 ~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~ 167 (176)
+.=+..+-+..+-...+.|++....+.|++|.+.+++..|.++|+..+.+.-. ...+|..+++-
T Consensus 25 D~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K~~~--~~~iY~~~lqE 88 (109)
T 1v54_E 25 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGP--HKEIYPYVIQE 88 (109)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT--CTTHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--chhhHHHHHHH
Confidence 34466777778888888999999999999999999999999999988765433 45578777764
No 240
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.39 E-value=4.5 Score=34.95 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=84.9
Q ss_pred HHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCC-------------CCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHH
Q 036589 10 FRLASLLHLQKHPKLALQLFKNPNPNANDTEAPP-------------LKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQ 76 (176)
Q Consensus 10 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~ 76 (176)
-.+-..|...|++++|.+.|++. ...-...... ......-..-|..++..+-+.+.++.+.++-+.
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~ka-a~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTT-SLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTC-CCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHH-hhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34556788899999999999987 3221111000 000111234577888889999999998887776
Q ss_pred HhhcCCCCCc---hHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHH
Q 036589 77 LKHDTRVIPE---EIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLD 139 (176)
Q Consensus 77 m~~~~g~~~~---~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~ 139 (176)
..+..+...+ ...|..+.+++...|++++|...+-.+.....+ ..+...|+..+|..|..+
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~r--~~cLr~LV~~lce~~~~~ 988 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPLK--KSCLLDFVNQLTKQGKIN 988 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSSC--HHHHHHHHHHHHHHCCHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHhCCChh
Confidence 6654222222 236888999999999999999999888754433 456677777777666543
No 241
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.17 E-value=4 Score=31.08 Aligned_cols=96 Identities=4% Similarity=-0.089 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhc-CCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc---cCCCCccHh----H
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHD-TRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP---SFNVQRTVK----S 124 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~-~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~---~~~~~p~~~----~ 124 (176)
++..+...|.+.|+++.|.+.|.++... .+..--...+-.+|+.+...+++..+...+++.. ..+-.|+.. .
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 4556788888999999999999999875 1233344567778999999999999998888764 233223222 1
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 125 LNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 125 ~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
|..+ .+...+++..|.+.|-+...
T Consensus 213 ~~gl--~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 213 YYGI--HCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHH--GGGGTSCHHHHHHHHHHHHH
T ss_pred HHHH--HHHHhChHHHHHHHHHHHhc
Confidence 2222 22356889999999888654
No 242
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.52 E-value=1.9 Score=32.91 Aligned_cols=99 Identities=6% Similarity=-0.218 Sum_probs=70.3
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
....+.+.|.+.|+++.|.+.|.++ ... ..+...-...+-.+|..+...+++..+...+++......-.++.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~-~~~-------~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~ 204 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKS-LSK-------AISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDW 204 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHH-HHH-------HTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HHh-------cCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCH
Confidence 5677889999999999999999998 332 13344567788889999999999999999999987542222333
Q ss_pred HHHHHH----HHHHHhccCHHHHHHHHHhcc
Q 036589 88 IIFCNV----ISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 88 ~~~~~l----i~~~~~~g~~~~a~~~~~~m~ 114 (176)
...+.+ ...+...+++.+|.+.|-+..
T Consensus 205 ~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~ 235 (429)
T 4b4t_R 205 ERRNRYKTYYGIHCLAVRNFKEAAKLLVDSL 235 (429)
T ss_dssp HHHHHHHHHHHHGGGGTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHh
Confidence 322221 112234678988888877654
No 243
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=90.33 E-value=1.7 Score=31.48 Aligned_cols=78 Identities=8% Similarity=-0.032 Sum_probs=59.7
Q ss_pred cHHHHHHHHHHHHhc-----CChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhc-cCHHHHHHHHHhcccCCCC--cc
Q 036589 50 NLLHYDLIITKLGRA-----KMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRA-RLLEHALQVFDEMPSFNVQ--RT 121 (176)
Q Consensus 50 ~~~~y~~li~~~~~~-----g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~-g~~~~a~~~~~~m~~~~~~--p~ 121 (176)
+-..|..+...|.+. |+.++|.+.|++..+- ...-+..++....+.+++. |+.+++.+.+++..+.... |+
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L-nP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~ 276 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY-CSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPH 276 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH-CCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSS
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh-CCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCC
Confidence 356889999999995 9999999999999977 3222356666677888884 9999999999999977655 55
Q ss_pred HhHHHHH
Q 036589 122 VKSLNTL 128 (176)
Q Consensus 122 ~~~~~~l 128 (176)
....|.+
T Consensus 277 ~~lan~~ 283 (301)
T 3u64_A 277 NKLLVIL 283 (301)
T ss_dssp CHHHHHH
T ss_pred hhHHHHH
Confidence 4444433
No 244
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=87.49 E-value=2.7 Score=26.28 Aligned_cols=67 Identities=13% Similarity=-0.069 Sum_probs=49.8
Q ss_pred CcHHHHHHHHHHHHhcCChHH---HHHHHHHHhhcCC-CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 49 YNLLHYDLIITKLGRAKMFDE---MQQILHQLKHDTR-VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 49 ~~~~~y~~li~~~~~~g~~~~---a~~~~~~m~~~~g-~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
++..+--.+..++.+...... +..+++++.+. + ..-.....-.|.-++.+.|++++|.+.++.+.+.
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~-~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK-GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT-SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 456665567777887776655 88999998887 4 2123344455788999999999999999999864
No 245
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=86.31 E-value=3.8 Score=29.24 Aligned_cols=55 Identities=7% Similarity=-0.023 Sum_probs=37.6
Q ss_pred HHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 59 TKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 59 ~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
....+.|.++++..-...-.+. -..|...-..+++.+|-.|+|+.|.+-++...+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~--~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~ 59 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKA--SPKDASLRSSFIELLCIDGDFERADEQLMQSIK 59 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHT--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHh--CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3455677777777666665555 244556666778888888888888877776664
No 246
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=85.90 E-value=3.2 Score=24.96 Aligned_cols=89 Identities=12% Similarity=-0.049 Sum_probs=56.4
Q ss_pred cCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHH
Q 036589 64 AKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKE 143 (176)
Q Consensus 64 ~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~ 143 (176)
....++|.-|=+.+... +- ....--+-+..+...|++++|..+.+.+- .||..+|-+|-. .|.|..+++..
T Consensus 20 ~H~HqEA~tIAdwL~~~-~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce--~rlGl~s~le~ 90 (116)
T 2p58_C 20 NHYHEEANCIAEWLHLK-GE--EEAVQLIRLSSLMNRGDYASALQQGNKLA----YPDLEPWLALCE--YRLGLGSALES 90 (116)
T ss_dssp TTCHHHHHHHHHHHHHT-TC--HHHHHHHHHHHHHHTTCHHHHHHHHTTSC----CGGGHHHHHHHH--HHHTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhC-Cc--HHHHHHHHHHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHH--HhcccHHHHHH
Confidence 34467777777777766 33 22222223344556788888888877776 588877776643 46677777777
Q ss_pred HHHHHHhccccccchHHHHH
Q 036589 144 LFISFNLKAIAVLDGLCSNL 163 (176)
Q Consensus 144 l~~~m~~~~~~~p~~~t~~~ 163 (176)
-+.++...|- |....|..
T Consensus 91 rL~~la~sg~--p~~q~Fa~ 108 (116)
T 2p58_C 91 RLNRLARSQD--PRIQTFVN 108 (116)
T ss_dssp HHHHHTTCCC--HHHHHHHH
T ss_pred HHHHHHhCCC--HHHHHHHH
Confidence 7777776665 35555543
No 247
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=84.49 E-value=4.4 Score=26.15 Aligned_cols=66 Identities=9% Similarity=0.183 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC--HHHHHHHHHhcccCCCCc
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL--LEHALQVFDEMPSFNVQR 120 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~~~~p 120 (176)
..+.+|.-|...|+.++|.+.++++... .+ -...+...+..++-+.++ -+.+..++..+...++.+
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p-~f-~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is 78 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVP-HF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTIT 78 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCG-GG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCC-cc-hHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcC
Confidence 4566788888888888888888888643 22 234455556666655322 455667777776555443
No 248
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=84.27 E-value=5.7 Score=24.80 Aligned_cols=65 Identities=9% Similarity=0.187 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC--HHHHHHHHHhcccCCCC
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL--LEHALQVFDEMPSFNVQ 119 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~~~~ 119 (176)
....++.-|...|+.++|.+.++++... .+ -.......+..++-+.++ -+....++..+...|+.
T Consensus 9 ki~~ll~EY~~~~D~~Ea~~cl~eL~~p-~f-~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~i 75 (129)
T 2nsz_A 9 EIDMLLKEYLLSGDISEAEHCLKELEVP-HF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 75 (129)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCG-GG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCC-cc-HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCc
Confidence 3456777788888888888888887643 22 234444555556555432 35566667666654433
No 249
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=83.32 E-value=6.8 Score=24.99 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=49.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHH
Q 036589 66 MFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA 131 (176)
Q Consensus 66 ~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 131 (176)
+.-+..+-++.+... .+.|+.....+-+++|.+..++..|+++|+-.+.. +.+....|..++.-
T Consensus 68 D~wElrrglN~l~~~-DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K-~~~~~~iY~y~lqE 131 (152)
T 2y69_E 68 DAWELRKGMNTLVGY-DLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQE 131 (152)
T ss_dssp CHHHHHHHHHHHTTS-SBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHHH
T ss_pred cHHHHHHHHHHHhcc-ccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCchhhHHHHHHH
Confidence 455677777777777 89999999999999999999999999999988832 12334456666543
No 250
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=81.77 E-value=2.9 Score=25.11 Aligned_cols=89 Identities=12% Similarity=-0.033 Sum_probs=58.7
Q ss_pred cCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHH
Q 036589 64 AKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKE 143 (176)
Q Consensus 64 ~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~ 143 (176)
....++|.-|=+.+... +- ....--+-+..+...|++++|..+.+.+- .||..+|-+|-. .|.|..+++..
T Consensus 19 ~H~HqEA~tIAdwL~~~-~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce--~rlGl~s~le~ 89 (115)
T 2uwj_G 19 QHCHEEALCIAEWLERL-GQ--DEAARLIRISSLANQGRYQEALAFAHGNP----WPALEPWFALCE--WHLGLGAALDR 89 (115)
T ss_dssp TTCHHHHHHHHHHHHHT-TC--HHHHHHHHHHHHHHTTCHHHHHGGGTTCC----CGGGHHHHHHHH--HHTTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhC-Cc--HHHHHHHHHHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHH--HhcccHHHHHH
Confidence 34567787777777766 33 22222233444556788888888777766 588888776643 57788888888
Q ss_pred HHHHHHhccccccchHHHHH
Q 036589 144 LFISFNLKAIAVLDGLCSNL 163 (176)
Q Consensus 144 l~~~m~~~~~~~p~~~t~~~ 163 (176)
-+.++..+|-+ ....|..
T Consensus 90 rL~~la~sg~p--~~q~Fa~ 107 (115)
T 2uwj_G 90 RLAGLGGSSDP--ALADFAA 107 (115)
T ss_dssp HHHHHHTCSSH--HHHHHHH
T ss_pred HHHHHHhCCCH--HHHHHHH
Confidence 88787777663 5555543
No 251
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=81.68 E-value=4.4 Score=25.96 Aligned_cols=47 Identities=9% Similarity=-0.077 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
.++..+++++.+. +..-.....-.|.-++.|.|++++|.+..+.+.+
T Consensus 59 ~~GI~LLe~l~~~-~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 59 RLGVKILTDIYKE-AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHHHH-CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 3455555555544 2222222223344555555555555555555553
No 252
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=81.58 E-value=3.8 Score=25.89 Aligned_cols=59 Identities=8% Similarity=-0.045 Sum_probs=27.8
Q ss_pred HHHHHHhccC---HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 93 VISFYGRARL---LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 93 li~~~~~~g~---~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
...++.+... ..+++.+++++.+.+-.-...+.--|--++.+.|++++|.+..+.+.+.
T Consensus 46 yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 46 YAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3444444433 3345555555543331112334444445555555555555555555543
No 253
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=80.88 E-value=11 Score=25.65 Aligned_cols=85 Identities=8% Similarity=-0.086 Sum_probs=58.1
Q ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHh--ccCHHHHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHH
Q 036589 72 QILHQLKHDTRVIPEEIIFCNVISFYGR--ARLLEHALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISF 148 (176)
Q Consensus 72 ~~~~~m~~~~g~~~~~~~~~~li~~~~~--~g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m 148 (176)
+...........+=|..-....|..--- ++...++..+|..|.+.|+-. -...|......+...|++.+|.++|+.-
T Consensus 62 rc~~~F~~~~rYkND~RYLklWl~Ya~~~~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~G 141 (202)
T 3esl_A 62 RCLIYIQDMETYRNDPRFLKIWIWYINLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELG 141 (202)
T ss_dssp HHHHHHTTCGGGTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcccccccCCHHHHHHHHHHHHhhcccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3333333332344455444444443333 455779999999999877644 4566788889999999999999999998
Q ss_pred Hhccccccc
Q 036589 149 NLKAIAVLD 157 (176)
Q Consensus 149 ~~~~~~~p~ 157 (176)
++.+-. |-
T Consensus 142 I~~~A~-P~ 149 (202)
T 3esl_A 142 AENNCR-PY 149 (202)
T ss_dssp HHTTCB-SH
T ss_pred HHcCCc-cH
Confidence 877666 64
No 254
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=80.57 E-value=13 Score=27.25 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=55.4
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcC-ChHHHHHHHHHHhhcCCCCCch
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAK-MFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
...++.-|...|+.++|.+.++++ .. +.+.| ..++..+..++-+.. .-+.+-+++..+.+. ++-...
T Consensus 14 ~~~ll~Ey~~~~d~~Ea~~ci~el-~~---------p~~~~-~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~-~~is~~ 81 (339)
T 1ug3_A 14 SKAIIEEYLHLNDMKEAVQCVQEL-AS---------PSLLF-IFVRHGVESTLERSAIAREHMGQLLHQLLCA-GHLSTA 81 (339)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTT-CC---------GGGHH-HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHT-TSSCHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHc-CC---------cccHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHC-CCCCHH
Confidence 356788999999999999999999 33 22322 334444444443322 234566788888877 544333
Q ss_pred HHHHHHHHHHHhccC----HHHHHHHHHh----cccCCCCc
Q 036589 88 IIFCNVISFYGRARL----LEHALQVFDE----MPSFNVQR 120 (176)
Q Consensus 88 ~~~~~li~~~~~~g~----~~~a~~~~~~----m~~~~~~p 120 (176)
.....+-+.+....+ ...|...+.. +...|+.|
T Consensus 82 ~~~~Gf~~~~~~l~Dl~lDiP~a~~~La~~v~~~i~~g~l~ 122 (339)
T 1ug3_A 82 QYYQGLYEILELAEDMEIDIPHVWLYLAELVTPILQEGGVP 122 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHGGGGSTTSCC
T ss_pred HHHHHHHHHHhhChHhhcCccchHHHHHHHHHHHHHCCCCC
Confidence 332333333333332 3344444444 44556544
No 255
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=80.23 E-value=8.3 Score=27.53 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=58.0
Q ss_pred CCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCC-CccHhHH
Q 036589 48 RYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDT-RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNV-QRTVKSL 125 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~-g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~-~p~~~~~ 125 (176)
+-|...-..+++-+|-.|++++|.+-++...+-. ...|...+|-.+|.+ .... .++|.-=..=++ .....-.
T Consensus 28 P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~a----E~~R--~~vfaG~~~P~~~g~~~~w~ 101 (273)
T 1zbp_A 28 PKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKA----AQAR--KDFAQGAATAKVLGENEELT 101 (273)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH----HHHH--HHHTTSCCCEECCCSCHHHH
T ss_pred CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHH----HHHH--HHHHcCCCCCCCCCCCHHHH
Confidence 3467777789999999999999998888777551 134444455555554 1111 123332111001 1122234
Q ss_pred HHHHHHHHh--cCcHHHHHHHHHHHHhc
Q 036589 126 NTLLNALLT--CGKLDRMKELFISFNLK 151 (176)
Q Consensus 126 ~~ll~~~~~--~g~~~~a~~l~~~m~~~ 151 (176)
..++.++.. .|+.++|.++-....+.
T Consensus 102 ~~ll~Al~~~~~G~~~~A~~lr~~A~e~ 129 (273)
T 1zbp_A 102 KSLVSFNLSMVSQDYEQVSELALQIEEL 129 (273)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHhc
Confidence 456666543 59999999988887654
No 256
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=79.94 E-value=9 Score=24.18 Aligned_cols=72 Identities=8% Similarity=-0.119 Sum_probs=51.3
Q ss_pred CCcHHHHHHHHHHHHhcCC---hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccH
Q 036589 48 RYNLLHYDLIITKLGRAKM---FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTV 122 (176)
Q Consensus 48 ~~~~~~y~~li~~~~~~g~---~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~ 122 (176)
.|+..+--....++.+... ..++..+++++.+. +..-....+--|.-++.+.|++++|.+..+.+.+. .|+-
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~--eP~N 111 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH--ERNN 111 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--CTTC
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh--CCCC
Confidence 4455554445556666554 56788899999987 53334555566888999999999999999999864 3553
No 257
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=79.84 E-value=10 Score=24.83 Aligned_cols=18 Identities=11% Similarity=-0.066 Sum_probs=7.9
Q ss_pred cHHHHHHHHHHHHhcCCh
Q 036589 50 NLLHYDLIITKLGRAKMF 67 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~ 67 (176)
+...-...+.++.+.+..
T Consensus 58 ~~~vr~~a~~~L~~~~~~ 75 (201)
T 3ltj_A 58 DAWVRRAAADALGQIGDE 75 (201)
T ss_dssp SHHHHHHHHHHHHHHCCG
T ss_pred CHHHHHHHHHHHHhhCCH
Confidence 334444444444444443
No 258
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=79.16 E-value=18 Score=27.26 Aligned_cols=136 Identities=10% Similarity=-0.010 Sum_probs=86.8
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC-hHHHHHHHHHHh----hcCCC
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM-FDEMQQILHQLK----HDTRV 83 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~-~~~a~~~~~~m~----~~~g~ 83 (176)
...|.+.|...|+.++..+++... ..-- ..-+-.-.......+|+.+....+ .+.-.++..+.. .....
T Consensus 22 ~~~l~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~ 95 (394)
T 3txn_A 22 ILQQGELYKQEGKAKELADLIKVT-RPFL-----SSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRT 95 (394)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT-TTGG-----GGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHHH-----HHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999998887 2210 000111244457788888887543 344344444444 33111
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-----cHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-----TVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-----~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
-....+=.-+...|...|++.+|..++.++.+.--.. -...+-.-+..|...+++.++...+.....
T Consensus 96 flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~ 167 (394)
T 3txn_A 96 FLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSART 167 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 1111222358899999999999999888887421111 233456667888899999999999988753
No 259
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=78.98 E-value=12 Score=24.90 Aligned_cols=108 Identities=10% Similarity=0.014 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC
Q 036589 6 PTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP 85 (176)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~ 85 (176)
...|..|-+...+.|+++-|.+.|... .+ +..+.-.|.-.|+.+...++-+..... |
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~-~D------------------~~~L~~Ly~~tg~~e~L~kla~iA~~~-g--- 90 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQ-HS------------------FDKLSFLYLVTGDVNKLSKMQNIAQTR-E--- 90 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHT-TC------------------HHHHHHHHHHHTCHHHHHHHHHHHHHT-T---
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHh-CC------------------HHHHHHHHHHhCCHHHHHHHHHHHHHC-c---
Confidence 346899999999999999999999998 33 334555666778887776665555444 2
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISF 148 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m 148 (176)
-+|.-..++.-.|++++++++|.+..+ .|-. .-.....|.-+.|.++..++
T Consensus 91 ---~~n~af~~~l~lGdv~~~i~lL~~~~r---~~eA------~~~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 91 ---DFGSMLLNTFYNNSTKERSSIFAEGGS---LPLA------YAVAKANGDEAAASAFLEQA 141 (177)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHHTTC---HHHH------HHHHHHTTCHHHHHHHHHHT
T ss_pred ---cHHHHHHHHHHcCCHHHHHHHHHHCCC---hHHH------HHHHHHcCcHHHHHHHHHHh
Confidence 346666667788999999999977663 1211 11223367788888888776
No 260
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=77.74 E-value=8.3 Score=31.81 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=43.5
Q ss_pred HHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 60 KLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 60 ~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
.|...|+++-|.++=++.... ..-+-.+|..|..+|.+.|+++.|+-.+..++
T Consensus 346 FLl~K~~~elAL~~Ak~AV~~--aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 346 FLLNRGDYELALGVSNTSTEL--ALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHhccCcHHHHHHHHHHHHhc--CchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 344678999999988888765 34456889999999999999999999998885
No 261
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=77.36 E-value=1.4 Score=23.52 Aligned_cols=28 Identities=11% Similarity=-0.078 Sum_probs=11.6
Q ss_pred HHHHHHHHHHhccccccchHHHHHHHHHh
Q 036589 140 RMKELFISFNLKAIAVLDGLCSNLKIIMN 168 (176)
Q Consensus 140 ~a~~l~~~m~~~~~~~p~~~t~~~li~~~ 168 (176)
+|.+.|.+|++..-. +...||...+..+
T Consensus 4 Eae~aF~~lL~~~~V-~s~wsweqamr~i 31 (59)
T 2b7e_A 4 EAEKEFITMLKENQV-DSTWSFSRIISEL 31 (59)
T ss_dssp HHHHHHHHHHHHTTC-CSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-CCCCcHHHHHHHh
Confidence 444444444332222 3444444444444
No 262
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=76.68 E-value=15 Score=27.69 Aligned_cols=93 Identities=11% Similarity=-0.040 Sum_probs=62.0
Q ss_pred HHHHHHHhcCChHHHHHHHHHHhhcCCCCCc-----hHHHHHHHHHHHhccCHHHHHHHHHhccc--CC--CCccHhHHH
Q 036589 56 LIITKLGRAKMFDEMQQILHQLKHDTRVIPE-----EIIFCNVISFYGRARLLEHALQVFDEMPS--FN--VQRTVKSLN 126 (176)
Q Consensus 56 ~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~-----~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~~--~~p~~~~~~ 126 (176)
.+...|...|++.+|.+++..+.+. -.+.| ...+..-++.|...+++.++...+..... .. +.|.....-
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~-~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRE-LKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-HTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-HhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 5788889999999999998888875 12222 34455678889999999999999887652 11 222222211
Q ss_pred HHH--HHHH-hcCcHHHHHHHHHHHH
Q 036589 127 TLL--NALL-TCGKLDRMKELFISFN 149 (176)
Q Consensus 127 ~ll--~~~~-~~g~~~~a~~l~~~m~ 149 (176)
-.. ..+. ..+++++|...|-+..
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf 208 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAF 208 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHH
Confidence 122 1223 6788999988876653
No 263
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=76.01 E-value=16 Score=24.85 Aligned_cols=75 Identities=9% Similarity=0.134 Sum_probs=55.1
Q ss_pred CCCCcHHHHHHHHHHHHh--cCChHHHHHHHHHHhhcCCC-CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc
Q 036589 46 PFRYNLLHYDLIITKLGR--AKMFDEMQQILHQLKHDTRV-IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT 121 (176)
Q Consensus 46 ~~~~~~~~y~~li~~~~~--~g~~~~a~~~~~~m~~~~g~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~ 121 (176)
.++-|+.-...-|..--. .+...++..+|..|... |+ .--...|-.....+...|++.+|.++|+.=.+.+-.|-
T Consensus 72 rYkND~RYLklWl~Ya~~~~~~~~~~p~~if~~L~~~-~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~ 149 (202)
T 3esl_A 72 TYRNDPRFLKIWIWYINLFLSNNFHESENTFKYMFNK-GIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPY 149 (202)
T ss_dssp GGTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH-TSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred cccCCHHHHHHHHHHHHhhcccccCCHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 444476654444433333 44577999999999999 65 44556677888899999999999999998887776774
No 264
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=75.51 E-value=15 Score=24.20 Aligned_cols=97 Identities=6% Similarity=-0.031 Sum_probs=65.9
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch-------HHHHHHHHHHHhccCHHHHHHHHHhcccC-C--------
Q 036589 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE-------IIFCNVISFYGRARLLEHALQVFDEMPSF-N-------- 117 (176)
Q Consensus 54 y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~-------~~~~~li~~~~~~g~~~~a~~~~~~m~~~-~-------- 117 (176)
+-.=+..+...|.++.|+-+...+....+-.|+. .++..+.+++...|++..|...|++..+. .
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3344677788999999998888766542233332 35566788999999999999999874210 0
Q ss_pred --------CCc-------cHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 118 --------VQR-------TVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 118 --------~~p-------~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
..| +...---+-.+|.+.+++++|+.+++....
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~ 150 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS 150 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc
Confidence 000 112223367888999999999999887643
No 265
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=73.02 E-value=8.7 Score=28.62 Aligned_cols=78 Identities=8% Similarity=0.110 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC--HHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL--LEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
..+.+|.-|...|+.++|.+.++++... .+. ..+....+..++-+.++ -+...+++..+...|+.+.......+..
T Consensus 219 ki~~lL~EY~~s~D~~EA~~ci~EL~~p-~fh-he~V~~av~~aLE~~~~~~re~~~~LL~~L~~~glls~~q~~~Gf~~ 296 (358)
T 3eiq_C 219 EIDMLLKEYLLSGDISEAEHCLKELEVP-HFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYER 296 (358)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCT-TCH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHccCC-cch-HHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 3577788888888888888888888754 333 34445556666655433 4567777777776665554444444333
Q ss_pred HH
Q 036589 131 AL 132 (176)
Q Consensus 131 ~~ 132 (176)
.+
T Consensus 297 vl 298 (358)
T 3eiq_C 297 IY 298 (358)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 266
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=72.84 E-value=16 Score=23.39 Aligned_cols=82 Identities=7% Similarity=-0.121 Sum_probs=55.6
Q ss_pred CCchHHHHHHHHHHHhccC---HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHH
Q 036589 84 IPEEIIFCNVISFYGRARL---LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLC 160 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~---~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t 160 (176)
.|+..+--....++.+... ..+++.+++++...+-.-...+.-.|--++.+.|++++|.+..+.+.+..+......+
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 3455444447777777765 5578889998886442234555666778999999999999999999886554223344
Q ss_pred HHHHH
Q 036589 161 SNLKI 165 (176)
Q Consensus 161 ~~~li 165 (176)
-..+|
T Consensus 116 Lk~~I 120 (144)
T 1y8m_A 116 LKSMV 120 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 267
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=72.27 E-value=15 Score=22.84 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc--HHHHHHHHHHHHhcccc
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK--LDRMKELFISFNLKAIA 154 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~--~~~a~~l~~~m~~~~~~ 154 (176)
..+.++.=|...|+.++|.+.++++..- .-........+..++-+.++ .+.+..++..+...|+-
T Consensus 9 ki~~ll~EY~~~~D~~Ea~~cl~eL~~p-~f~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~i 75 (129)
T 2nsz_A 9 EIDMLLKEYLLSGDISEAEHCLKELEVP-HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 75 (129)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCG-GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCc
Confidence 3467899999999999999999999731 11233445566666666542 46677888888776665
No 268
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=72.21 E-value=18 Score=23.82 Aligned_cols=18 Identities=17% Similarity=-0.021 Sum_probs=8.1
Q ss_pred ccHhHHHHHHHHHHhcCc
Q 036589 120 RTVKSLNTLLNALLTCGK 137 (176)
Q Consensus 120 p~~~~~~~ll~~~~~~g~ 137 (176)
++...-...+.++.+.+.
T Consensus 155 ~~~~vr~~a~~aL~~~~~ 172 (211)
T 3ltm_A 155 EDGWVRQSAADALGEIGG 172 (211)
T ss_dssp SSHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 344444444444444444
No 269
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=69.54 E-value=21 Score=23.45 Aligned_cols=101 Identities=12% Similarity=0.011 Sum_probs=64.6
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCC--CCCCCCCCCCCCCCCCc--HHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPN--PNANDTEAPPLKPFRYN--LLHYDLIITKLGRAKMFDEMQQILHQLKHDTR-- 82 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g-- 82 (176)
+-.=++.+...+.++.|.-+.+-+. .+.. ..-+.|. ..++..+.+++-..|++.+|...|++..+...
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~------~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNN------PELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS------TTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCC------cccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 3444777788888888877766631 1100 0111221 22455677888899999999999999532201
Q ss_pred ---------------------CCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 83 ---------------------VIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 83 ---------------------~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
...+...---+-.||.+.+++++|+.+++.+..
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~ 150 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS 150 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc
Confidence 011112222378999999999999999999874
No 270
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=69.52 E-value=19 Score=23.08 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc--HHHHHHHHHHHHhcccc
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK--LDRMKELFISFNLKAIA 154 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~--~~~a~~l~~~m~~~~~~ 154 (176)
..+.+|.=|...|+.++|.+.++++..- .-........+..++-+.++ .+.+..++..+...++.
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p-~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~i 77 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVP-HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 77 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCG-GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCC-cchHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCc
Confidence 4467899999999999999999999731 11233445556666666432 45677777777766655
No 271
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=69.27 E-value=7.5 Score=25.26 Aligned_cols=70 Identities=7% Similarity=0.035 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC--CCCccHhHHHHHHHHHHhcCcH
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF--NVQRTVKSLNTLLNALLTCGKL 138 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~--~~~p~~~~~~~ll~~~~~~g~~ 138 (176)
+.+.+-+.+..+..|++++..= ..+++.+...+..-.|.++++.+.+. +...+..|.---|+.+...|-+
T Consensus 14 ~~~~~~~~~~L~~~g~r~T~qR-~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv 85 (162)
T 4ets_A 14 DVLLERFKKILRQGGLKYTKQR-EVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMV 85 (162)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHcCCCCCHHH-HHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCE
Confidence 3444444443333366664433 34566666666667777777777655 4445555655556666666544
No 272
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=68.62 E-value=19 Score=22.68 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=29.1
Q ss_pred HhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc
Q 036589 77 LKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK 137 (176)
Q Consensus 77 m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~ 137 (176)
+++. |++++..=.. ++..+...+..-.|.++++.+.+.+...+..|.---|+.+...|-
T Consensus 13 l~~~-g~r~T~qR~~-Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Gl 71 (145)
T 2fe3_A 13 LKET-GVRITPQRHA-ILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGL 71 (145)
T ss_dssp HHHT-TCCCCHHHHH-HHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTS
T ss_pred HHHc-CCCCCHHHHH-HHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCC
Confidence 3334 5544443322 444444445555566666666555444455555555555555443
No 273
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=67.77 E-value=19 Score=22.73 Aligned_cols=61 Identities=10% Similarity=0.038 Sum_probs=42.7
Q ss_pred hcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 112 EMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 112 ~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
.+.+.|++++.. --.++..+...+..-.|.++++.+.+.+.. .+..|.---++.+...|-+
T Consensus 12 ~l~~~g~r~T~q-R~~Il~~L~~~~~~~sa~ei~~~l~~~~~~-is~aTVYR~L~~L~e~Glv 72 (145)
T 2fe3_A 12 TLKETGVRITPQ-RHAILEYLVNSMAHPTADDIYKALEGKFPN-MSVATVYNNLRVFRESGLV 72 (145)
T ss_dssp HHHHTTCCCCHH-HHHHHHHHHHCSSCCCHHHHHHHHGGGCTT-CCHHHHHHHHHHHHHTTSE
T ss_pred HHHHcCCCCCHH-HHHHHHHHHhCCCCCCHHHHHHHHHHhCCC-CChhhHHHHHHHHHHCCCE
Confidence 355677766654 455666776777777899999999888766 6666666666777766643
No 274
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=66.41 E-value=16 Score=23.31 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=24.0
Q ss_pred CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC
Q 036589 82 RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG 136 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g 136 (176)
|++++..=. .++..+...+..-.|.++++.+.+.+...+..|.--.|+.+...|
T Consensus 22 g~r~T~qR~-~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~G 75 (150)
T 2xig_A 22 GLKNSKQRE-EVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKEN 75 (150)
T ss_dssp C--CHHHHH-HHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHH-HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCC
Confidence 444443322 244444444445555555555554443344444444444444444
No 275
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=66.32 E-value=0.21 Score=39.20 Aligned_cols=56 Identities=11% Similarity=0.113 Sum_probs=40.9
Q ss_pred CCCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHH
Q 036589 3 KAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEM 70 (176)
Q Consensus 3 ~p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a 70 (176)
.-|+-.|.-++.+..+.|.+++-++.+....+.. .++..=+.|+.+|++.++..+.
T Consensus 80 A~Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~~------------ke~~IDteLi~ayAk~~rL~el 135 (624)
T 3lvg_A 80 ADDPSSYMEVVQAANTSGNWEELVKYLQMARKKA------------RESYVETELIFALAKTNRLAEL 135 (624)
T ss_dssp CSCCCSSSHHHHHTTTSSCCTTHHHHHHTTSTTC------------CSTTTTHHHHHHHHTSCSSSTT
T ss_pred CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh------------cccccHHHHHHHHHhhCcHHHH
Confidence 4567788899999999999999999988873221 1334445688888888776553
No 276
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=65.83 E-value=19 Score=21.62 Aligned_cols=60 Identities=8% Similarity=0.085 Sum_probs=40.6
Q ss_pred HHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHH
Q 036589 59 TKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLN 126 (176)
Q Consensus 59 ~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~ 126 (176)
..+...|++++|..+.+. -..||...|-+|-.. |.|..+++..-+..+.+.| .|....|.
T Consensus 47 sSLmNrG~Yq~Al~l~~~-----~c~pdlepw~ALce~--rlGl~s~le~rL~~la~sg-~p~~q~Fa 106 (115)
T 2uwj_G 47 SSLANQGRYQEALAFAHG-----NPWPALEPWFALCEW--HLGLGAALDRRLAGLGGSS-DPALADFA 106 (115)
T ss_dssp HHHHHTTCHHHHHGGGTT-----CCCGGGHHHHHHHHH--HTTCHHHHHHHHHHHHTCS-SHHHHHHH
T ss_pred HHHHcchhHHHHHHhcCC-----CCCchHHHHHHHHHH--hcccHHHHHHHHHHHHhCC-CHHHHHHH
Confidence 445567778877655433 346888888777554 7888888888887777666 45555443
No 277
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=65.81 E-value=28 Score=25.93 Aligned_cols=65 Identities=11% Similarity=0.068 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc--HHHHHHHHHHHHhcccc
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK--LDRMKELFISFNLKAIA 154 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~--~~~a~~l~~~m~~~~~~ 154 (176)
..+.+|.=|...|+.++|.+.++++..-. -........+..++-+.++ .+.+.+++..+...|+.
T Consensus 219 ki~~lL~EY~~s~D~~EA~~ci~EL~~p~-fhhe~V~~av~~aLE~~~~~~re~~~~LL~~L~~~gll 285 (358)
T 3eiq_C 219 EIDMLLKEYLLSGDISEAEHCLKELEVPH-FHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 285 (358)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCTT-CHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHccCCc-chHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCC
Confidence 35778999999999999999999998422 1123445566666666543 45677888888777665
No 278
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=65.59 E-value=22 Score=22.58 Aligned_cols=61 Identities=8% Similarity=0.007 Sum_probs=41.0
Q ss_pred hcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccC
Q 036589 112 EMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRV 174 (176)
Q Consensus 112 ~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~ 174 (176)
.+.+.|.+++. .--.++..+...+..-.|.++++.+.+.+.. .+..|.--.++.+...|-+
T Consensus 17 ~l~~~g~r~T~-qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~-is~aTVYR~L~~L~e~Glv 77 (150)
T 2xig_A 17 SIKKNGLKNSK-QREEVVSVLYRSGTHLSPEEITHSIRQKDKN-TSISSVYRILNFLEKENFI 77 (150)
T ss_dssp HHHHCC--CHH-HHHHHHHHHHHCSSCBCHHHHHHHHHHHSTT-CCHHHHHHHHHHHHHTTSE
T ss_pred HHHHcCCCCCH-HHHHHHHHHHhCCCCCCHHHHHHHHHHhCCC-CCHhhHHHHHHHHHHCCcE
Confidence 35567766554 4556677777777788899999999887766 6666655566666666643
No 279
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=65.25 E-value=14 Score=20.55 Aligned_cols=11 Identities=9% Similarity=0.117 Sum_probs=4.6
Q ss_pred HHHHHHHHHhc
Q 036589 141 MKELFISFNLK 151 (176)
Q Consensus 141 a~~l~~~m~~~ 151 (176)
+.++++.+.+.
T Consensus 36 ~~el~~~l~~~ 46 (83)
T 2fu4_A 36 AEDLYKRLIDM 46 (83)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 44444444433
No 280
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=64.83 E-value=19 Score=23.35 Aligned_cols=69 Identities=10% Similarity=0.107 Sum_probs=47.5
Q ss_pred HHHHHHHHHh-cccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhc--cccccchHHHHHHHHHhhcccc
Q 036589 103 LEHALQVFDE-MPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLK--AIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 103 ~~~a~~~~~~-m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~--~~~~p~~~t~~~li~~~~~~g~ 173 (176)
.+.+++-+.+ +.+.|.+++. .-..++..+...+..-.|.++++.+.+. +.. .+..|.=--++.+...|-
T Consensus 13 ~~~~~~~~~~~L~~~g~r~T~-qR~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~-is~aTVYRtL~~L~e~Gl 84 (162)
T 4ets_A 13 YDVLLERFKKILRQGGLKYTK-QREVLLKTLYHSDTHYTPESLYMEIKQAEPDLN-VGIATVYRTLNLLEEAEM 84 (162)
T ss_dssp HHHHHHHHHHHHHHHTCCCCH-HHHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGC-CCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCCCH-HHHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHHHCCC
Confidence 3455555554 4467777754 4667788888888888899999999887 665 665555555566666664
No 281
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=64.29 E-value=21 Score=21.50 Aligned_cols=60 Identities=10% Similarity=0.112 Sum_probs=40.6
Q ss_pred HHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHH
Q 036589 59 TKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLN 126 (176)
Q Consensus 59 ~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~ 126 (176)
..+...|++++|..+.+.+ ..||...|-+|-.. |.|..+++..-+..+.+.| .|....|.
T Consensus 48 sSLmNrG~Yq~Al~l~~~~-----c~pdlepw~ALce~--rlGl~s~le~rL~~la~sg-~p~~q~Fa 107 (116)
T 2p58_C 48 SSLMNRGDYASALQQGNKL-----AYPDLEPWLALCEY--RLGLGSALESRLNRLARSQ-DPRIQTFV 107 (116)
T ss_dssp HHHHHTTCHHHHHHHHTTS-----CCGGGHHHHHHHHH--HHTCHHHHHHHHHHHTTCC-CHHHHHHH
T ss_pred HHHHcchhHHHHHHhcCCC-----CCchHHHHHHHHHH--hcccHHHHHHHHHHHHhCC-CHHHHHHH
Confidence 4455778888887665433 36888888777554 7788888888887777666 45554443
No 282
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=64.19 E-value=17 Score=23.00 Aligned_cols=30 Identities=10% Similarity=0.098 Sum_probs=11.6
Q ss_pred HHHHHHHHhcccCCCCccHhHHHHHHHHHH
Q 036589 104 EHALQVFDEMPSFNVQRTVKSLNTLLNALL 133 (176)
Q Consensus 104 ~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 133 (176)
-.|.++++.+.+.+...+..|.---|+.+.
T Consensus 34 ~ta~ei~~~l~~~~~~is~~TVYR~L~~L~ 63 (145)
T 3eyy_A 34 ATPDDILGEVRKTASGINISTVYRTLELLE 63 (145)
T ss_dssp BCHHHHHHHHHTTCTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhCCCCCHhHHHHHHHHHH
Confidence 344444444443333333333333333333
No 283
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=62.46 E-value=30 Score=22.71 Aligned_cols=139 Identities=12% Similarity=-0.040 Sum_probs=82.7
Q ss_pred CCCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC
Q 036589 3 KAKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTR 82 (176)
Q Consensus 3 ~p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g 82 (176)
.|++..-...+..+.+.++....-.+.+.+ .+ ++...-...+.++.+.+..+....+.+.+ ..
T Consensus 30 ~~~~~vR~~A~~~L~~~~~~~~~~~L~~~l-~~-------------~~~~vr~~a~~aL~~~~~~~~~~~L~~~l-~~-- 92 (211)
T 3ltm_A 30 DDSYYVRRAAAYALGKIGDERAVEPLIKAL-KD-------------EDAWVRRAAADALGQIGDERAVEPLIKAL-KD-- 92 (211)
T ss_dssp CSSHHHHHHHHHHHHHHCCGGGHHHHHHHT-TC-------------SCHHHHHHHHHHHHHHCCGGGHHHHHHHT-TC--
T ss_pred CCCHHHHHHHHHHHHHhCCccHHHHHHHHH-cC-------------CCHHHHHHHHHHHHhhCCHHHHHHHHHHH-cC--
Confidence 455555566678888888765555555555 33 26777777888888888755444444433 33
Q ss_pred CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHH
Q 036589 83 VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSN 162 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~ 162 (176)
++...-...+.++.+.|+.+ +...+.++.+ .++...-...+.++.+.|..+ +...+..+.+. ++..+-.
T Consensus 93 --~~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~---d~~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~d----~~~~vr~ 161 (211)
T 3ltm_A 93 --EDGWVRQSAAVALGQIGDER-AVEPLIKALK---DEDWFVRIAAAFALGEIGDER-AVEPLIKALKD----EDGWVRQ 161 (211)
T ss_dssp --SSHHHHHHHHHHHHHHCCGG-GHHHHHHHTT---CSSHHHHHHHHHHHHHHCCGG-GHHHHHHHTTC----SSHHHHH
T ss_pred --CCHHHHHHHHHHHHHhCcHH-HHHHHHHHHh---CCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHcC----CCHHHHH
Confidence 45566667788888888754 3344444443 367777777788888777644 34444444432 4444434
Q ss_pred HHHHHhh
Q 036589 163 LKIIMND 169 (176)
Q Consensus 163 ~li~~~~ 169 (176)
..+.++.
T Consensus 162 ~a~~aL~ 168 (211)
T 3ltm_A 162 SAADALG 168 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 284
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=62.23 E-value=33 Score=24.88 Aligned_cols=63 Identities=11% Similarity=0.084 Sum_probs=40.3
Q ss_pred HHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCc--HHHHHHHHHHHHhcccc
Q 036589 91 CNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGK--LDRMKELFISFNLKAIA 154 (176)
Q Consensus 91 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~--~~~a~~l~~~m~~~~~~ 154 (176)
+.++.=|...|+.++|.+.++++..-. -........+..++-+.++ .+.+.+++..+.+.|+.
T Consensus 170 ~~lL~EY~~~~D~~EA~~ci~EL~~p~-f~~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~l 234 (307)
T 2zu6_B 170 DMLLKEYLLSGDISEAEHCLKELEVPH-FHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTI 234 (307)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHCCGG-GHHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHcCCCc-chHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCC
Confidence 457888888899999999999987311 1122334455555555433 45566777777766555
No 285
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=62.05 E-value=29 Score=22.37 Aligned_cols=71 Identities=8% Similarity=0.024 Sum_probs=50.7
Q ss_pred CCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccc
Q 036589 83 VIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLD 157 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~ 157 (176)
.+=|..-....|..---+ +++..+|..|.+.|+-. -...|......+...|++.+|.++|+.-++.+-. |-
T Consensus 64 YknD~RyLklWl~ya~~~---~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~-P~ 135 (152)
T 4a1g_A 64 YHNDPRFISYCLKFAEYN---SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE-PR 135 (152)
T ss_dssp GTTCHHHHHHHHHHHTTB---SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB-SH
T ss_pred ccCCHHHHHHHHHHHHhc---CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-cH
Confidence 444554444444443333 34788999998877644 4566788888999999999999999998887766 64
No 286
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=61.38 E-value=18 Score=20.05 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=35.4
Q ss_pred HHhhcCCCCCchHHHHHHHHHHHhcc-CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcH
Q 036589 76 QLKHDTRVIPEEIIFCNVISFYGRAR-LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKL 138 (176)
Q Consensus 76 ~m~~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~ 138 (176)
.+++. |++.+..-. .++..+...+ ..-.+.++++.+.+.+...+..|..-.|+.+...|-+
T Consensus 7 ~l~~~-g~~~t~~r~-~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv 68 (83)
T 2fu4_A 7 ALKKA-GLKVTLPRL-KILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIV 68 (83)
T ss_dssp HHHHT-TCCCCHHHH-HHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSE
T ss_pred HHHHc-CCCcCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCe
Confidence 34555 666665443 4556665554 4555666777766555445666666666666665543
No 287
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=60.97 E-value=77 Score=26.91 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=72.1
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc----------------
Q 036589 57 IITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR---------------- 120 (176)
Q Consensus 57 li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p---------------- 120 (176)
++..|...|..+-|.++....... | ..+| .+-.+|..+|++++|.++|++.. .|+..
T Consensus 816 l~~~L~~~~~~~~a~eL~~~~~~t----~-~~~y-v~gr~~L~~ge~~~A~~~F~kAA-~gl~~~~~~~~~~~~~~~ll~ 888 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQLIGWLNSD----P-IAVY-LKALIYLKSKEAVKAVRCFKTTS-LVLYSHTSQFAVLREFQEIAE 888 (950)
T ss_dssp HHHHHHHTTCHHHHHHHGGGCCSS----H-HHHH-HHHHHHHHTTCHHHHHHHHHTCC-CTTCSSCCSCGGGHHHHHHHH
T ss_pred HHHHHHHhcHHHHHHHHHhhcCCC----h-HHHH-HHHHHHHHcCCHHHHHHHHHHHh-hhcccCcccccchhhhhhccC
Confidence 556666777777666544433322 1 2333 47788999999999999999865 22211
Q ss_pred -------cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc---ccchHHHHHHHHHhhccc
Q 036589 121 -------TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA---VLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 121 -------~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~---~p~~~t~~~li~~~~~~g 172 (176)
...-|..++..|-+.+.++-+.++-+...+.--+ .-....|..++.+.+..|
T Consensus 889 ~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 889 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp HTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhhCC
Confidence 1125778888899999999998887776653211 012347788888887665
No 288
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=60.81 E-value=77 Score=26.89 Aligned_cols=110 Identities=11% Similarity=-0.020 Sum_probs=71.1
Q ss_pred HHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC----
Q 036589 10 FRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP---- 85 (176)
Q Consensus 10 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~---- 85 (176)
--++..|...+.++-|.++..+. +. ++..--.+..+|...|++++|...|++.-. |+..
T Consensus 814 ~~l~~~L~~~~~~~~a~eL~~~~-~~--------------t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~--gl~~~~~~ 876 (950)
T 4gq2_M 814 TELVEKLFLFKQYNACMQLIGWL-NS--------------DPIAVYLKALIYLKSKEAVKAVRCFKTTSL--VLYSHTSQ 876 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHGGGC-CS--------------SHHHHHHHHHHHHHTTCHHHHHHHHHTCCC--TTCSSCCS
T ss_pred HHHHHHHHHhcHHHHHHHHHhhc-CC--------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHhh--hcccCccc
Confidence 34677788889999998888887 33 333334577888899999999999987552 2211
Q ss_pred -------------------chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc----HhHHHHHHHHHHhcC
Q 036589 86 -------------------EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT----VKSLNTLLNALLTCG 136 (176)
Q Consensus 86 -------------------~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~----~~~~~~ll~~~~~~g 136 (176)
...-|..++..+-+.+.++.++++-+...+.--.-| +..|+.+.++.+..|
T Consensus 877 ~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 877 FAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp CGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhhCC
Confidence 112456677777888888877776665543211112 234666666655443
No 289
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=60.63 E-value=12 Score=27.57 Aligned_cols=100 Identities=15% Similarity=0.054 Sum_probs=48.3
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhcc-CHHHHHHHHHhcccCCCCccHhHHHHHHHHH
Q 036589 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRAR-LLEHALQVFDEMPSFNVQRTVKSLNTLLNAL 132 (176)
Q Consensus 54 y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~ 132 (176)
...++.-|...|+.++|.+.++++... .+ ........+..++-+.. .-+.+..++..+.+.|+ .+-..+..+|
T Consensus 14 ~~~ll~Ey~~~~d~~Ea~~ci~el~~p-~~-~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~----is~~~~~~Gf 87 (339)
T 1ug3_A 14 SKAIIEEYLHLNDMKEAVQCVQELASP-SL-LFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGH----LSTAQYYQGL 87 (339)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTCCG-GG-HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTS----SCHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCc-cc-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCC----CCHHHHHHHH
Confidence 455677777778888888877777644 22 12233333333333221 12344455555554332 2223333332
Q ss_pred HhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHh
Q 036589 133 LTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMN 168 (176)
Q Consensus 133 ~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~ 168 (176)
. ++++.+.+..+..|....+-.-+-+-
T Consensus 88 ~---------~~~~~l~Dl~lDiP~a~~~La~~v~~ 114 (339)
T 1ug3_A 88 Y---------EILELAEDMEIDIPHVWLYLAELVTP 114 (339)
T ss_dssp H---------HHHHHHHHHTTTCTTHHHHHHHHHGG
T ss_pred H---------HHHhhChHhhcCccchHHHHHHHHHH
Confidence 2 34444444444336666665544443
No 290
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=60.55 E-value=19 Score=22.80 Aligned_cols=59 Identities=8% Similarity=-0.030 Sum_probs=39.7
Q ss_pred hcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhcccc
Q 036589 112 EMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVR 173 (176)
Q Consensus 112 ~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~ 173 (176)
.+.+.|++++.. -..++..+...+ .-.|.++++.+.+.+.. .+..|.=--++.+...|-
T Consensus 9 ~L~~~g~r~T~q-R~~Il~~l~~~~-h~ta~ei~~~l~~~~~~-is~~TVYR~L~~L~e~Gl 67 (145)
T 3eyy_A 9 DLRQRGYRLTPQ-RQLVLEAVDTLE-HATPDDILGEVRKTASG-INISTVYRTLELLEELGL 67 (145)
T ss_dssp HHHTTTCCCCHH-HHHHHHHHHHHS-SBCHHHHHHHHHTTCTT-CCHHHHHHHHHHHHHHTS
T ss_pred HHHHcCCCcCHH-HHHHHHHHHhcC-CCCHHHHHHHHHhhCCC-CCHhHHHHHHHHHHHCCc
Confidence 445677776654 445566666666 66899999999887776 666665555666666654
No 291
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=60.27 E-value=16 Score=22.75 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=15.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhcc
Q 036589 66 MFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRAR 101 (176)
Q Consensus 66 ~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g 101 (176)
..-.|.++++.+++. +...+..|...-|+.+.+.|
T Consensus 33 ~~~sa~ei~~~l~~~-~~~is~aTVYR~L~~L~e~G 67 (136)
T 1mzb_A 33 RHMSAEDVYKALMEA-GEDVGLATVYRVLTQFEAAG 67 (136)
T ss_dssp CSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhh-CCCCCHHHHHHHHHHHHHCC
Confidence 344455555555444 33334444333444444443
No 292
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=60.13 E-value=40 Score=23.36 Aligned_cols=91 Identities=15% Similarity=0.163 Sum_probs=58.3
Q ss_pred HHHHHHHhcCChHHHHHHHHHHhhcC-CCCC----chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 56 LIITKLGRAKMFDEMQQILHQLKHDT-RVIP----EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 56 ~li~~~~~~g~~~~a~~~~~~m~~~~-g~~~----~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
.-++.+....+|++|..++++.++.. +.+. +.......+..-.....-.-+..+.+++.. .+....-...+.
T Consensus 23 deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~---~~~~~~~r~~v~ 99 (235)
T 2d2s_A 23 EEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS---SNEIVHLKSGTE 99 (235)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT---CSSHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHH
Confidence 45778888999999999988877541 1221 112223334444443444444555555533 455666777889
Q ss_pred HHHhcCcHHHHHHHHHHHH
Q 036589 131 ALLTCGKLDRMKELFISFN 149 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~ 149 (176)
.+.+.|+-++|.++|=+..
T Consensus 100 ~L~rLg~~~~A~~lfL~~r 118 (235)
T 2d2s_A 100 NMIKLGLPEQALDLFLQNR 118 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCChhHHHHHHHHHH
Confidence 9999999999999986654
No 293
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=59.90 E-value=16 Score=23.80 Aligned_cols=60 Identities=12% Similarity=0.069 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC-HHHHHHHHHhcc
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL-LEHALQVFDEMP 114 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~-~~~a~~~~~~m~ 114 (176)
....+|.-|...++.++|...++++... .+.|. +.-..+-.++-+... -+.+..++..+.
T Consensus 12 k~~~ii~EYf~~~D~~Ea~~~l~eL~~p-~~~~~-~V~~~I~~aldrk~~ere~~s~LL~~L~ 72 (165)
T 2rg8_A 12 TLTPIIQEYFEHGDTNEVAEMLRDLNLG-EMKSG-VPVLAVSLALEGKASHREMTSKLLSDLC 72 (165)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCS-GGGGH-HHHHHHHHHHTSCHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCc-ccHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3455777888888888888888887754 33222 222222233322211 334556666664
No 294
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=59.51 E-value=17 Score=22.48 Aligned_cols=49 Identities=14% Similarity=0.085 Sum_probs=37.6
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCH
Q 036589 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLL 103 (176)
Q Consensus 54 y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~ 103 (176)
--.++..+...+..-.|.++++.+++. +...+..|.-..|+.+.+.|-+
T Consensus 13 R~~Il~~l~~~~~~~sa~ei~~~l~~~-~~~is~~TVYR~L~~L~e~Glv 61 (131)
T 2o03_A 13 RAAISTLLETLDDFRSAQELHDELRRR-GENIGLTTVYRTLQSMASSGLV 61 (131)
T ss_dssp HHHHHHHHHHCCSCEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHTTTSE
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHh-CCCCCHhhHHHHHHHHHHCCCE
Confidence 344677777777788899999999888 6677777777778888777764
No 295
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.50 E-value=56 Score=24.89 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcC-CCCCc---hHHHHHHHHHHHhccCHHHHHHHHHhcc----cCCCCcc--H
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDT-RVIPE---EIIFCNVISFYGRARLLEHALQVFDEMP----SFNVQRT--V 122 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~-g~~~~---~~~~~~li~~~~~~g~~~~a~~~~~~m~----~~~~~p~--~ 122 (176)
....|...+-..|++.+|.+++.++.... +.... ...+...++.|...+++..|..++.+.. +....|+ .
T Consensus 139 l~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~ 218 (445)
T 4b4t_P 139 VTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKL 218 (445)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHH
Confidence 44567788888999999999999987651 22111 3466678899999999999999988763 2222232 2
Q ss_pred hHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 123 KSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 123 ~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
..+...+..+...+++.+|.+.|.+.-+
T Consensus 219 ~~~~~~~~~~~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 219 EYYNLLVKISLHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 4566777888889999999888877754
No 296
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=59.23 E-value=15 Score=23.11 Aligned_cols=56 Identities=14% Similarity=0.068 Sum_probs=41.4
Q ss_pred CCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCH
Q 036589 46 PFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLL 103 (176)
Q Consensus 46 ~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~ 103 (176)
+++++ .--..++..+...+..-.|.++++.+++. +...+..|.-.-|+.+.+.|-+
T Consensus 9 g~r~T-~qR~~Il~~L~~~~~h~sa~eI~~~l~~~-~~~is~aTVYR~L~~L~e~Glv 64 (139)
T 3mwm_A 9 KGRAT-RQRAAVSAALQEVEEFRSAQELHDMLKHK-GDAVGLTTVYRTLQSLADAGEV 64 (139)
T ss_dssp -CHHH-HHHHHHHHHHTTCSSCEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHTTSS
T ss_pred CCccC-HHHHHHHHHHHhCCCCCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHCCCE
Confidence 44443 33455777887777788899999999988 7777777777788888888764
No 297
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=59.05 E-value=13 Score=19.74 Aligned_cols=22 Identities=9% Similarity=-0.050 Sum_probs=10.7
Q ss_pred ccCHHHHHHHHHhcccCCCCcc
Q 036589 100 ARLLEHALQVFDEMPSFNVQRT 121 (176)
Q Consensus 100 ~g~~~~a~~~~~~m~~~~~~p~ 121 (176)
.|+++.|+..+-+|...+..|+
T Consensus 36 ~gdvd~aI~~LL~m~~~~~~~~ 57 (59)
T 1wgl_A 36 RGNKDAAINSLLQMGEEPSGPS 57 (59)
T ss_dssp TTCHHHHHHHHHHSSCCCCSCC
T ss_pred CCCHHHHHHHHHcCcCCCCCCC
Confidence 4445555555555554444443
No 298
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=58.73 E-value=18 Score=22.98 Aligned_cols=34 Identities=9% Similarity=-0.000 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhcc
Q 036589 67 FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRAR 101 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g 101 (176)
.-.|.++++.+++. +...+..|...-|+.+.+.|
T Consensus 33 h~sa~ei~~~l~~~-~~~is~aTVYR~L~~L~e~G 66 (150)
T 2w57_A 33 HISAEELYKKLIDL-GEEIGLATVYRVLNQFDDAG 66 (150)
T ss_dssp SEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHCC
Confidence 33444444444444 33333333333344444443
No 299
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=58.04 E-value=12 Score=27.82 Aligned_cols=83 Identities=11% Similarity=0.116 Sum_probs=48.3
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCC-hHHHHHHHHHHhhcCCCCCch
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKM-FDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~-~~~a~~~~~~m~~~~g~~~~~ 87 (176)
...++.-|...|+.++|.+.++++ ... ..+.| ...+..+..++-+... -+.+-.++..+... ++-+..
T Consensus 15 ~~~ii~EY~~~~D~~Ea~~~l~eL-~~p--------~~~~~-~~v~~~i~~aLer~~~~re~~~~LL~~L~~~-~~ls~~ 83 (364)
T 3l6a_A 15 TETVVTEYLNSGNANEAVNGVREM-RAP--------KHFLP-EMLSKVIILSLDRSDEDKEKASSLISLLKQE-GIATSD 83 (364)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHH-TCC--------GGGHH-HHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT-TSSCHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHh-CCc--------hhhHH-HHHHHHHHHHHCCChHHHHHHHHHHHHHHHC-CCCCHH
Confidence 357889999999999999999999 321 01222 3344444444433322 23455677778776 554444
Q ss_pred HHHHHHHHHHHhccC
Q 036589 88 IIFCNVISFYGRARL 102 (176)
Q Consensus 88 ~~~~~li~~~~~~g~ 102 (176)
.....+...+....+
T Consensus 84 ~~~~Gf~~lle~l~D 98 (364)
T 3l6a_A 84 NFMQAFLNVLDQCPK 98 (364)
T ss_dssp HHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHhhChH
Confidence 444444444444443
No 300
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=57.94 E-value=20 Score=19.48 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcH
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKL 138 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~ 138 (176)
.++.+++.+++---+++++..+++..+.| ..+...|---.+.+++...+
T Consensus 4 l~~Qll~l~Aed~AieDaiy~L~~aL~~g-~I~l~~ylK~vR~LaReQF~ 52 (65)
T 2f6m_A 4 GLNQLYNLVAQDYALTDTIEALSRMLHRG-TIPLDTFVKQGRELARQQFL 52 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 45566666666666777777777776665 34555555555555554333
No 301
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=57.09 E-value=88 Score=26.40 Aligned_cols=94 Identities=15% Similarity=-0.036 Sum_probs=57.5
Q ss_pred HHHHHHHhccCh---hHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 11 RLASLLHLQKHP---KLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 11 ~l~~~~~~~~~~---~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.++...|+.|+. +.|.+.|+....... ...++|+.... +...-.+.|.-++-..+++..+.. . +.
T Consensus 691 ~~l~~ac~~g~~~c~~~a~~~f~~~~~~~~------~~~i~~dlr~~--vy~~~~~~g~~~~~~~l~~~~~~~-~---~~ 758 (909)
T 4fke_A 691 NAISTACSNGLPQCENLAKTLFDQWMSDPE------NNPIHPNLRST--IYCNAIAQGGQDQWDFAWGQLQQA-Q---LV 758 (909)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTCTT------SCCSCTTTHHH--HHHHHHHHSCHHHHHHHHHHHHHC-C---SH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHhhCCC------CCcCCHHHHHH--HHHHHHHhCCHHHHHHHHHHHHcc-C---CH
Confidence 356667777664 468888887523211 13456665432 333334567666666677777665 1 33
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccC
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSF 116 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 116 (176)
.--..++.+++...+.....++++.....
T Consensus 759 ~ek~~ll~aL~~~~d~~~l~~~L~~~l~~ 787 (909)
T 4fke_A 759 NEADKLRSALACSNEVWLLNRYLGYTLNP 787 (909)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 34466788888888888888888777653
No 302
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=56.91 E-value=38 Score=22.11 Aligned_cols=83 Identities=5% Similarity=0.019 Sum_probs=55.5
Q ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 72 QILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 72 ~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
+...........+=|..-....|..--.++ +...+|..|.+.|+-. -...|......+...|++.+|.++|..-++
T Consensus 48 rc~~~f~~~~~YknD~RyLklWl~ya~~~~---~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~ 124 (164)
T 2wvi_A 48 RAVEALQGEKRYYSDPRFLNLWLKLGRLCN---EPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQ 124 (164)
T ss_dssp HHHHHTTTCGGGTTCHHHHHHHHHHHHHCS---CHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhhccCHHHHHHHHHHHHhcC---CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 333333333334555555555554433333 4677899998877654 455677888888999999999999999888
Q ss_pred ccccccch
Q 036589 151 KAIAVLDG 158 (176)
Q Consensus 151 ~~~~~p~~ 158 (176)
.+-. |-.
T Consensus 125 ~~A~-P~~ 131 (164)
T 2wvi_A 125 QKAE-PLE 131 (164)
T ss_dssp TTCB-SHH
T ss_pred cCCC-cHH
Confidence 7766 653
No 303
>2ko4_A Mediator of RNA polymerase II transcription subun; GAL11, mediator, activator, CO-activator, MED15, trans nucleus, phosphoprotein, transcription regulation; NMR {Saccharomyces cerevisiae} PDB: 2lpb_A
Probab=56.51 E-value=10 Score=21.44 Aligned_cols=35 Identities=3% Similarity=0.022 Sum_probs=24.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 036589 44 LKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLK 78 (176)
Q Consensus 44 ~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~ 78 (176)
.++++|++.+|+-+....-+.--..+++.+.+++-
T Consensus 29 IPnLPpgVnTW~qI~el~qkk~i~~~~m~iik~iy 63 (81)
T 2ko4_A 29 IPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVY 63 (81)
T ss_dssp SSSCCTTTCBHHHHHHHHTTTSSCHHHHHHHHHHH
T ss_pred CCCCCCCcchHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 37788899999988777666655666666665554
No 304
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=55.41 E-value=64 Score=24.26 Aligned_cols=142 Identities=9% Similarity=-0.004 Sum_probs=75.7
Q ss_pred HHHHHHHhccC---hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 11 RLASLLHLQKH---PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 11 ~l~~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.++...|+.|+ ..+|.+.|+....... ...++||.... +.+.+ .+.-++-..+++..+.. .+.
T Consensus 202 ~~l~~ac~~g~~~c~~~A~~~f~~~~~~~~------~~~i~~dlr~~---Vy~~~-~~~~~~~~~l~~~y~~s----~~~ 267 (419)
T 3rjo_A 202 QLLLLACVHNYQPCVQRAEGYFRKWKESNG------NLSLPVDVTLA---VFAVG-AQSTEGWDFLYSKYQFS----LSS 267 (419)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTT------CSCCCGGGHHH---HHHHH-TTSHHHHHHHHHHHHHC----CCH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhCCC------CCCCCCCccee---EEeee-eCCHHHHHHHHHHHhcC----CCH
Confidence 45667777776 4578888887622221 01467776642 22222 22233344555555554 244
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC-cHHHHHHHHHH----HHhccccccchHHHH
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG-KLDRMKELFIS----FNLKAIAVLDGLCSN 162 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g-~~~~a~~l~~~----m~~~~~~~p~~~t~~ 162 (176)
.--..++.+++...+.....++++......+.+..... .++.+...+. ..+.|.+.+.+ +.+ ... ++...+.
T Consensus 268 ~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~qD~~-~~~~~v~~n~~g~~~aw~fl~~nw~~l~~-~~~-~~~~~~~ 344 (419)
T 3rjo_A 268 TEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQEFP-QILTLIGRNPVGYPLAWQFLRKNWNKLVQ-KFE-LGSSSIA 344 (419)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGGGHH-HHHHHHHTSTTTHHHHHHHHHHHHHHHHH-HHC-TTCHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchhHHH-HHHHHHhcCcchHHHHHHHHHHHHHHHHH-HhC-cCchhHH
Confidence 55677889998888888888888877754432223323 3344444432 23445555433 222 122 2334556
Q ss_pred HHHHHhh
Q 036589 163 LKIIMND 169 (176)
Q Consensus 163 ~li~~~~ 169 (176)
.+|.+..
T Consensus 345 ~~i~~~~ 351 (419)
T 3rjo_A 345 HMVMGTT 351 (419)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 6665443
No 305
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=55.38 E-value=48 Score=22.86 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=52.1
Q ss_pred CChHHHHHHHHHHhhcCCCCCchHH--HHHHHHHHHhc--cC--------------HHHHHHHHHhcccCCCCccHh--H
Q 036589 65 KMFDEMQQILHQLKHDTRVIPEEII--FCNVISFYGRA--RL--------------LEHALQVFDEMPSFNVQRTVK--S 124 (176)
Q Consensus 65 g~~~~a~~~~~~m~~~~g~~~~~~~--~~~li~~~~~~--g~--------------~~~a~~~~~~m~~~~~~p~~~--~ 124 (176)
++|.+-..+++.+... +....... ---++.++.|. |+ ++-|+.+|+.+...-..++.. .
T Consensus 33 ~dFrq~rdi~eall~~-~l~~~~~~~k~iri~QfLsRI~eG~~LD~~Fd~~~~lTPLESAl~v~~~I~~e~~l~~~l~e~ 111 (235)
T 3bu8_A 33 GDFRQIRDIMQALLVR-PLGKEHTVSRLLRVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVES 111 (235)
T ss_dssp HHHHHHHHHHHHHTTS-CCCCCHHHHHHHHHHHHHHHHHTTTCTTEECSSSTTCCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-cccccccchhHHHHHHHHHHHHcCCCCCcccCCCCCCChHHHHHHHHHHHHHhhcCcHHHHHH
Confidence 4455666677776645 44444332 22234444442 22 688999999988543222221 1
Q ss_pred -----HHHHHHHHHhcCcHHHHHHHHHHHHhc
Q 036589 125 -----LNTLLNALLTCGKLDRMKELFISFNLK 151 (176)
Q Consensus 125 -----~~~ll~~~~~~g~~~~a~~l~~~m~~~ 151 (176)
--..+-.|.+.|.+++|.++|++....
T Consensus 112 i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~ 143 (235)
T 3bu8_A 112 SRKLVKEAAVIICIKNKEFEKASKILKKHMSK 143 (235)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHhcC
Confidence 123456788999999999999998764
No 306
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=55.26 E-value=41 Score=26.78 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=10.6
Q ss_pred HHHHHHhccCHHHHHHHHHhcc
Q 036589 93 VISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 93 li~~~~~~g~~~~a~~~~~~m~ 114 (176)
++..|.+.|-.++|.++++.+-
T Consensus 522 vL~iCa~l~L~~~ar~I~k~~g 543 (570)
T 3f3f_C 522 MLSICVEWRLPEIAKEIYTTLG 543 (570)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCChHHHHHHHHHHH
Confidence 4444444555555555544443
No 307
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=55.18 E-value=39 Score=21.74 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHhhcCCC-CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc
Q 036589 67 FDEMQQILHQLKHDTRV-IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT 121 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~ 121 (176)
.+++..+|..|... |+ .--...|-.....+...|++.+|.++|+.=.+.+-.|-
T Consensus 81 ~~dp~~if~~L~~~-~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 135 (152)
T 4a1g_A 81 NSDLHQFFEFLYNH-GIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPR 135 (152)
T ss_dssp BSCHHHHHHHHHTT-TTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred cCCHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 34588899999988 65 44556677888889999999999999998887766664
No 308
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=54.12 E-value=22 Score=22.13 Aligned_cols=61 Identities=10% Similarity=0.081 Sum_probs=42.0
Q ss_pred HhhcCCCCCchHHHHHHHHHHHhcc-CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHH
Q 036589 77 LKHDTRVIPEEIIFCNVISFYGRAR-LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLD 139 (176)
Q Consensus 77 m~~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~ 139 (176)
+++. |++++..=.. ++..+...+ ..-.|.++++.+.+.+...+..|.---|+.+...|-+.
T Consensus 9 l~~~-g~r~T~qR~~-Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 70 (136)
T 1mzb_A 9 LRKA-GLKVTLPRVK-ILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 70 (136)
T ss_dssp HHHT-TCCCCHHHHH-HHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHC-CCCCCHHHHH-HHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEE
Confidence 4555 7766654443 566666666 67788888888887766677777777788888777653
No 309
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=53.15 E-value=25 Score=21.69 Aligned_cols=24 Identities=17% Similarity=0.134 Sum_probs=10.0
Q ss_pred HHHHHhcCcHHHHHHHHHHHHhcc
Q 036589 129 LNALLTCGKLDRMKELFISFNLKA 152 (176)
Q Consensus 129 l~~~~~~g~~~~a~~l~~~m~~~~ 152 (176)
+..+...+..-.|.++++.+.+.+
T Consensus 17 l~~l~~~~~~~sa~ei~~~l~~~~ 40 (131)
T 2o03_A 17 STLLETLDDFRSAQELHDELRRRG 40 (131)
T ss_dssp HHHHHHCCSCEEHHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCHHHHHHHHHHhC
Confidence 333333333344444444444443
No 310
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=53.03 E-value=15 Score=20.31 Aligned_cols=12 Identities=42% Similarity=0.462 Sum_probs=5.7
Q ss_pred HHHHHHHHHhcc
Q 036589 103 LEHALQVFDEMP 114 (176)
Q Consensus 103 ~~~a~~~~~~m~ 114 (176)
.++|.+.|.+|+
T Consensus 14 ~eea~~~F~~LL 25 (71)
T 1uzc_A 14 KEEAKQAFKELL 25 (71)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444554444
No 311
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=51.79 E-value=56 Score=22.53 Aligned_cols=50 Identities=8% Similarity=0.145 Sum_probs=23.8
Q ss_pred HHHHHHHhcccCCCCc-cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 105 HALQVFDEMPSFNVQR-TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 105 ~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
+...+|..|.+.|+-. -...|......+...|++.+|.++|+.-++.+-.
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 3444555555444322 2333444555555555555555555555444433
No 312
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=49.90 E-value=50 Score=21.39 Aligned_cols=141 Identities=10% Similarity=-0.001 Sum_probs=83.4
Q ss_pred CCCCCHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 036589 4 AKPTSPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV 83 (176)
Q Consensus 4 p~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~ 83 (176)
+++..-...+.++.+.++....-.+.+.+ .. ++..+-...+.++.+.+..+....+.+ +...
T Consensus 57 ~~~~vr~~a~~~L~~~~~~~~~~~L~~~l-~d-------------~~~~vr~~a~~aL~~~~~~~~~~~L~~-~l~d--- 118 (201)
T 3ltj_A 57 EDAWVRRAAADALGQIGDERAVEPLIKAL-KD-------------EDGWVRQSAAVALGQIGDERAVEPLIK-ALKD--- 118 (201)
T ss_dssp SSHHHHHHHHHHHHHHCCGGGHHHHHHHT-TC-------------SSHHHHHHHHHHHHHHCCGGGHHHHHH-HTTC---
T ss_pred CCHHHHHHHHHHHHhhCCHHHHHHHHHHH-cC-------------CCHHHHHHHHHHHHHhCcHHHHHHHHH-HHcC---
Confidence 33333444556666666654444444434 22 367777788888888887654444444 3333
Q ss_pred CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHH
Q 036589 84 IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNL 163 (176)
Q Consensus 84 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~ 163 (176)
++...-...+.++.+.|+.+ +...+..+.. .++...-...+.++.+.|.. ++...+..+.+. ++...-..
T Consensus 119 -~~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~---d~~~~vr~~A~~aL~~~~~~-~~~~~L~~~l~d----~~~~vr~~ 188 (201)
T 3ltj_A 119 -EDWFVRIAAAFALGEIGDER-AVEPLIKALK---DEDGWVRQSAADALGEIGGE-RVRAAMEKLAET----GTGFARKV 188 (201)
T ss_dssp -SSHHHHHHHHHHHHHHTCGG-GHHHHHHHTT---CSSHHHHHHHHHHHHHHCSH-HHHHHHHHHHHH----CCHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhCCHH-HHHHHHHHHc---CCCHHHHHHHHHHHHHhCch-hHHHHHHHHHhC----CCHHHHHH
Confidence 45566666778888777643 4444444443 36777778888888888764 456666666543 45555555
Q ss_pred HHHHhhccc
Q 036589 164 KIIMNDSQV 172 (176)
Q Consensus 164 li~~~~~~g 172 (176)
.+.++.+.+
T Consensus 189 A~~aL~~l~ 197 (201)
T 3ltj_A 189 AVNYLETHK 197 (201)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHH
Confidence 555555443
No 313
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=49.61 E-value=19 Score=20.56 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcc-cCCCCccHhHHHHHHHHHHhcCcH
Q 036589 103 LEHALQVFDEMP-SFNVQRTVKSLNTLLNALLTCGKL 138 (176)
Q Consensus 103 ~~~a~~~~~~m~-~~~~~p~~~~~~~ll~~~~~~g~~ 138 (176)
.++|...|.+|+ +.++.|+ .+|...|...+.-..+
T Consensus 16 ~eea~~~Fk~LL~e~~V~p~-~tWe~~~~~i~~DpRY 51 (82)
T 2dod_A 16 LEARMKQFKDMLLERGVSAF-STWEKELHKIVFDPRY 51 (82)
T ss_dssp HHHHHHHHHHHHHHTTCCSS-SCHHHHHHHHHTCSGG
T ss_pred HHHHHHHHHHHHHHcCcCCC-CCHHHHHHHHccCCcc
Confidence 456666666665 3443333 4455555555444444
No 314
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=48.73 E-value=70 Score=23.17 Aligned_cols=95 Identities=8% Similarity=0.092 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC--HHHHHHHHHhcccCCCCccHhHHHHHHH
Q 036589 53 HYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL--LEHALQVFDEMPSFNVQRTVKSLNTLLN 130 (176)
Q Consensus 53 ~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 130 (176)
....++.-|...|+.++|.+.++++... .+. .......+..++-+.++ -+....++..+.+.|+.+.......+-.
T Consensus 168 ki~~lL~EY~~~~D~~EA~~ci~EL~~p-~f~-~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~~~Gf~~ 245 (307)
T 2zu6_B 168 EIDMLLKEYLLSGDISEAEHCLKELEVP-HFH-HELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRGYER 245 (307)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCG-GGH-HHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCCC-cch-HHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 3556777777888888888888888754 232 34555566666665433 4566678888876666555554444444
Q ss_pred HHHhcCc----HHHHHHHHHHHH
Q 036589 131 ALLTCGK----LDRMKELFISFN 149 (176)
Q Consensus 131 ~~~~~g~----~~~a~~l~~~m~ 149 (176)
.+....+ +-.|..++.++.
T Consensus 246 vl~~l~Dl~lDiP~A~~~la~~v 268 (307)
T 2zu6_B 246 IYNEIPDINLDVPHSYSVLERFV 268 (307)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHH
T ss_pred HHHhccHhhcccccHHHHHHHHH
Confidence 4443333 234555554443
No 315
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=48.49 E-value=18 Score=19.19 Aligned_cols=25 Identities=12% Similarity=0.098 Sum_probs=19.4
Q ss_pred cCChHHHHHHHHHHhhcCCCCCchH
Q 036589 64 AKMFDEMQQILHQLKHDTRVIPEEI 88 (176)
Q Consensus 64 ~g~~~~a~~~~~~m~~~~g~~~~~~ 88 (176)
.-+++.|...|.+++....+.|+..
T Consensus 33 ~Wd~~~A~~~F~~l~~~~~IP~eAF 57 (59)
T 1oai_A 33 NWDYTRSAQAFTHLKAKGEIPEVAF 57 (59)
T ss_dssp TTCHHHHHHHHHHHHHTTCSCGGGG
T ss_pred CCCHHHHHHHHHHHHHcCCCCHHHh
Confidence 4689999999999988745666543
No 316
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=48.32 E-value=39 Score=19.69 Aligned_cols=40 Identities=15% Similarity=0.103 Sum_probs=28.3
Q ss_pred cCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHH
Q 036589 101 RLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKEL 144 (176)
Q Consensus 101 g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l 144 (176)
...++|.++++.+... ....|..++.++...|...-|..+
T Consensus 51 t~~~~ar~Lld~L~~r----G~~Af~~F~~aL~et~~~~La~lL 90 (97)
T 3ygs_P 51 SRRDQARQLIIDLETR----GSQALPLFISCLEDTGQDMLASFL 90 (97)
T ss_dssp CHHHHHHHHHHHHTTS----CTTHHHHHHHHHHTTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHc----ChHHHHHHHHHHHHcCcHHHHHHH
Confidence 4678888888888854 346788888888776766555443
No 317
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=48.11 E-value=90 Score=23.83 Aligned_cols=45 Identities=11% Similarity=-0.055 Sum_probs=32.0
Q ss_pred HHHHHHH---hcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccc
Q 036589 127 TLLNALL---TCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 127 ~ll~~~~---~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g 172 (176)
.+|.++. +..+.+.|+.++.+|.+.|.. |....=..++.+.-.-|
T Consensus 257 d~isal~ksirgsd~daAl~~la~ml~~Ged-p~~i~rrl~~~a~edig 304 (447)
T 3pvs_A 257 DLISALHKSVRGSAPDAALYWYARIITAGGD-PLYVARRCLAIASEDVG 304 (447)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHhccc
Confidence 3455553 468899999999999999988 77666666655554433
No 318
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=47.71 E-value=93 Score=24.81 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=26.4
Q ss_pred cHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccccCC
Q 036589 121 TVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQVRVT 175 (176)
Q Consensus 121 ~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g~~~ 175 (176)
+..--.-++..|.+.|..+.|.++++.|-..-.. +...| .-+..|+|+|+++
T Consensus 515 Tndd~e~vL~iCa~l~L~~~ar~I~k~~g~k~l~--~g~~g-eAL~~f~rA~~~~ 566 (570)
T 3f3f_C 515 TNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLS--AHNII-ESIANFSRAGKYE 566 (570)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHHHHHHHC-------------------------
T ss_pred CHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH--CccHH-HHHHHHHHcCChh
Confidence 4455778999999999999999999999877665 66677 5567788888864
No 319
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=47.59 E-value=56 Score=21.31 Aligned_cols=74 Identities=9% Similarity=0.081 Sum_probs=52.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHh
Q 036589 46 PFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRV-IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVK 123 (176)
Q Consensus 46 ~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~ 123 (176)
.++-|+.-...-|..--.. +....+|..|... |+ .--...|-.....+...|++.+|.++|+.=.+.+-.|...
T Consensus 58 ~YknD~RyLklWl~ya~~~---~~p~~if~~L~~~-~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~ 132 (164)
T 2wvi_A 58 RYYSDPRFLNLWLKLGRLC---NEPLDMYSYLHNQ-GIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLER 132 (164)
T ss_dssp GGTTCHHHHHHHHHHHHHC---SCHHHHHHHHHHT-TSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred hhccCHHHHHHHHHHHHhc---CCHHHHHHHHHHC-CcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHH
Confidence 4444666555444322222 4477899999998 65 4445566778888899999999999999988877777543
No 320
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=47.29 E-value=85 Score=23.31 Aligned_cols=65 Identities=11% Similarity=0.062 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC-HHHHHHHHHhcccCC
Q 036589 52 LHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL-LEHALQVFDEMPSFN 117 (176)
Q Consensus 52 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~-~~~a~~~~~~m~~~~ 117 (176)
..-..+|.-|...|+.++|.+.++++... ..--..+.+..+..++-+... -+.+..++..+...+
T Consensus 13 k~~~~ii~EY~~~~D~~Ea~~~l~eL~~p-~~~~~~~v~~~i~~aLer~~~~re~~~~LL~~L~~~~ 78 (364)
T 3l6a_A 13 KLTETVVTEYLNSGNANEAVNGVREMRAP-KHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEG 78 (364)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHTCC-GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhCCc-hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHCC
Confidence 34566777888888888888888887643 111113333334444333211 233445555555443
No 321
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=47.16 E-value=26 Score=21.88 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=17.2
Q ss_pred HHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhc
Q 036589 93 VISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTC 135 (176)
Q Consensus 93 li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 135 (176)
+++.+...+..-.|.++++.+.+.+...+..|.---|+.+...
T Consensus 19 Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~ 61 (139)
T 3mwm_A 19 VSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADA 61 (139)
T ss_dssp HHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHC
Confidence 3333333334444444444444333333333333333333333
No 322
>1wty_A Hypothetical protein TTHA0048; structural genomics, riken structural genomics/proteomics in RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: a.24.16.2 PDB: 2ywa_A
Probab=47.00 E-value=45 Score=20.14 Aligned_cols=75 Identities=12% Similarity=0.138 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc-cCCCCccHhHHHHHHHHHHhcCcHHHHHHHH
Q 036589 67 FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP-SFNVQRTVKSLNTLLNALLTCGKLDRMKELF 145 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~-~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~ 145 (176)
+.+|..-+++.... .+|......++..+..+ ++.|+.+.+... ..|+ .+.++...+..+.+.|-++.. +.+
T Consensus 4 ~~~al~~L~e~~~~---~~~~~~~dg~i~~fe~t--~Elawk~~k~~l~~~g~--~~~s~rd~~r~a~~~glI~~~-~~w 75 (119)
T 1wty_A 4 LARAVERLKAALER---PKDEFIRDSAIQRFEFT--FELAWKTLKTFLELQGL--EARSPRAAIRGAFQVGLLPED-PFW 75 (119)
T ss_dssp HHHHHHHHHHHHSS---CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTC--CCSSHHHHHHHHHHHTSSCCC-HHH
T ss_pred HHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHcCC--CCCCHHHHHHHHHHcCCCCcH-HHH
Confidence 45555555555433 34555555555554332 344444444433 2454 466677777777777776555 455
Q ss_pred HHHH
Q 036589 146 ISFN 149 (176)
Q Consensus 146 ~~m~ 149 (176)
.+|.
T Consensus 76 ~~m~ 79 (119)
T 1wty_A 76 LEML 79 (119)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 323
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=46.66 E-value=27 Score=22.17 Aligned_cols=63 Identities=10% Similarity=0.130 Sum_probs=43.9
Q ss_pred HHHhhcCCCCCchHHHHHHHHHHHhcc-CHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHH
Q 036589 75 HQLKHDTRVIPEEIIFCNVISFYGRAR-LLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLD 139 (176)
Q Consensus 75 ~~m~~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~ 139 (176)
+.+++. |++++..=.. ++..+...+ ..-.|.++++.+.+.+...+..|.---|+.+...|-+.
T Consensus 6 ~~l~~~-g~r~T~qR~~-Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 69 (150)
T 2w57_A 6 QALKDA-GLKVTLPRLK-ILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVT 69 (150)
T ss_dssp HHHHHT-TCCCCHHHHH-HHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHc-CCCCCHHHHH-HHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcEE
Confidence 345555 7776655443 556666666 67788888888887766667778777888888877654
No 324
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=45.92 E-value=1.5e+02 Score=26.47 Aligned_cols=81 Identities=12% Similarity=0.069 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhccC---------------HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 89 IFCNVISFYGRARL---------------LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 89 ~~~~li~~~~~~g~---------------~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
.=+.|+.++++.|. .++-.+.|.++.+-=-.-|....-..+....+++++.+|++++.++.+..
T Consensus 1236 ~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k- 1314 (1354)
T 3lxu_X 1236 QKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEK- 1314 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 34578888888554 33444555555532111233333334445557899999999999998653
Q ss_pred cccchHHHHHHHHHhhccc
Q 036589 154 AVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 154 ~~p~~~t~~~li~~~~~~g 172 (176)
|+...|..++..+...|
T Consensus 1315 --~~~~~~~~~~~~~~~l~ 1331 (1354)
T 3lxu_X 1315 --RTRDHFVELAAINGALG 1331 (1354)
T ss_dssp --CCHHHHHHHHHHHHHHS
T ss_pred --ccHHHHHHHHHHHHHcC
Confidence 67778888887765443
No 325
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=45.19 E-value=71 Score=21.83 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=8.9
Q ss_pred HHHHHHHHHHhcCcHHHHHHHH
Q 036589 124 SLNTLLNALLTCGKLDRMKELF 145 (176)
Q Consensus 124 ~~~~ll~~~~~~g~~~~a~~l~ 145 (176)
+|.-++..+.+...+-++...|
T Consensus 231 s~~Ef~~~~~~~~~l~~~l~~~ 252 (256)
T 2jul_A 231 TIDEFLETCQKDENIMNSMQLF 252 (256)
T ss_dssp CHHHHHHHHHHCSSHHHHHHHH
T ss_pred eHHHHHHHHHhCHHHHHHHHhh
Confidence 3444444444444444433333
No 326
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=44.69 E-value=65 Score=21.25 Aligned_cols=86 Identities=5% Similarity=-0.108 Sum_probs=45.3
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCCCchHH--HHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhH--HHHHHHHH
Q 036589 57 IITKLGRAKMFDEMQQILHQLKHDTRVIPEEII--FCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKS--LNTLLNAL 132 (176)
Q Consensus 57 li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~--~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~--~~~ll~~~ 132 (176)
.+...++.|+.+.+..+++.+.+. |..++... ..+.+...+..|+.+-+..+++ .|..++... -.+.+...
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQG-GRELDIYNNLRQTPLHLAVITTLPSVVRLLVT----AGASPMALDRHGQTAAHLA 86 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhc-CCCCCcccccCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHH
Confidence 345556778888888888876665 54444321 1234445556777765554444 333332211 11233444
Q ss_pred HhcCcHHHHHHHHHH
Q 036589 133 LTCGKLDRMKELFIS 147 (176)
Q Consensus 133 ~~~g~~~~a~~l~~~ 147 (176)
+..|+.+-+..+++.
T Consensus 87 ~~~~~~~~~~~Ll~~ 101 (241)
T 1k1a_A 87 CEHRSPTCLRALLDS 101 (241)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHc
Confidence 556666555555444
No 327
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=43.38 E-value=57 Score=20.16 Aligned_cols=115 Identities=10% Similarity=-0.123 Sum_probs=57.6
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHH-
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIF- 90 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~- 90 (176)
.+...++.|+.+.+..+++.- ... ....+...+ +.+...+..|+.+-+..+++ . |..++....
T Consensus 11 ~l~~A~~~g~~~~v~~ll~~~-~~~---------~~~~~~~g~-t~L~~A~~~~~~~~v~~Ll~----~-g~~~~~~~~~ 74 (165)
T 3twr_A 11 QLLEAAKAGDVETVKKLCTVQ-SVN---------CRDIEGRQS-TPLHFAAGYNRVSVVEYLLQ----H-GADVHAKDKG 74 (165)
T ss_dssp HHHHHHHHTCHHHHHHHCCTT-TTT---------CCCTTTTCC-CHHHHHHHTTCHHHHHHHHH----T-TCCTTCCCTT
T ss_pred HHHHHHHhCCHHHHHHHHHcC-CCC---------ccccccCCC-CHHHHHHHcChHHHHHHHHh----c-CCCCCccCCC
Confidence 344556688998888888754 111 111111111 23444556777665544443 4 444433221
Q ss_pred -HHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHH--HHHHHHHHhcCcHHHHHHHHH
Q 036589 91 -CNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSL--NTLLNALLTCGKLDRMKELFI 146 (176)
Q Consensus 91 -~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~--~~ll~~~~~~g~~~~a~~l~~ 146 (176)
.+.+...+..|+.+-+..+++ .|..++.... .+-+...+..|+.+-+..+++
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 75 GLVPLHNACSYGHYEVAELLVK----HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 234445567788776655554 3433332211 133455566777765554443
No 328
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=42.78 E-value=33 Score=17.36 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 036589 103 LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFN 149 (176)
Q Consensus 103 ~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~ 149 (176)
.+.-.+.+.+|- |+...+.+-=..-...|++++|..++-.|.
T Consensus 4 ~e~~v~~L~EMF-----P~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~~ 45 (49)
T 1otr_A 4 HESKLSILMDMF-----PAISKSKLQVHLLENNNDLDLTIGLLLKEN 45 (49)
T ss_dssp HHHHHHHHHHHC-----SSSCHHHHHHHHHHTTTCSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHC-----CCCCHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 445566666665 555444333333345788888888876663
No 329
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.23 E-value=1.3e+02 Score=23.81 Aligned_cols=64 Identities=3% Similarity=-0.142 Sum_probs=44.1
Q ss_pred CHHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHH--H-HHHHHHHHHhcCChHHHHHHHHHHhhc
Q 036589 8 SPFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLL--H-YDLIITKLGRAKMFDEMQQILHQLKHD 80 (176)
Q Consensus 8 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-y~~li~~~~~~g~~~~a~~~~~~m~~~ 80 (176)
.+|.+++.|...+.++.|..+.... .-. ....++.. . +--+...+.-.+++.+|.+.+.+..+.
T Consensus 233 l~nllLRnYL~~~~y~qA~~lvsk~-~fP--------~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 233 LINLILRDFLNNGEVDSASDFISKL-EYP--------HTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHHHHH-CSC--------TTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHccCcHHHHHHHHhcC-cCC--------cccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 5788899999999999999999887 221 11122222 1 222445566788999999988887764
No 330
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.15 E-value=1.1e+02 Score=23.23 Aligned_cols=126 Identities=10% Similarity=0.117 Sum_probs=75.9
Q ss_pred ccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchH----------
Q 036589 19 QKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEI---------- 88 (176)
Q Consensus 19 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~---------- 88 (176)
.+++++|++-+-.+++... .......+......++..|.+.|+++...+.+.-+.+..|..+...
T Consensus 29 ~~~~~~a~e~ll~lEK~~r-----~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~ 103 (445)
T 4b4t_P 29 QNDCNSALDQLLVLEKKTR-----QASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEY 103 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHS-----SSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhh-----hccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3678888777655421100 0123344677788899999999999888776665554433222111
Q ss_pred -----------------------------------HHHHHHHHHHhccCHHHHHHHHHhccc--CCCCcc---HhHHHHH
Q 036589 89 -----------------------------------IFCNVISFYGRARLLEHALQVFDEMPS--FNVQRT---VKSLNTL 128 (176)
Q Consensus 89 -----------------------------------~~~~li~~~~~~g~~~~a~~~~~~m~~--~~~~p~---~~~~~~l 128 (176)
....|...|...|++.+|..++.++.. .|.... ...+..-
T Consensus 104 l~~~~~~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q 183 (445)
T 4b4t_P 104 LKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQ 183 (445)
T ss_dssp HHHHCTTHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHH
T ss_pred HhcCCchhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 112355666777778888777777652 222111 2345566
Q ss_pred HHHHHhcCcHHHHHHHHHHHH
Q 036589 129 LNALLTCGKLDRMKELFISFN 149 (176)
Q Consensus 129 l~~~~~~g~~~~a~~l~~~m~ 149 (176)
+..|...+++.+|..++++..
T Consensus 184 ~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 184 MELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHH
Confidence 677777788888877777653
No 331
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=42.11 E-value=14 Score=25.76 Aligned_cols=90 Identities=10% Similarity=-0.046 Sum_probs=52.8
Q ss_pred HHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCC----cHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 12 LASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRY----NLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 12 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~----~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
-++.+....++++|+.++++. +... .+.++ +...-...+..-.....-.-+..+.+++.. .+..
T Consensus 24 eLDv~IA~r~feeAv~lle~~-~~~l-------~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~----~~~~ 91 (235)
T 2d2s_A 24 EIDIELARLRFESAVETLLDI-ESQL-------EDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS----SNEI 91 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-HHHH-------HHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT----CSSH
T ss_pred HHHHHHHHHhHHHHHHHHHHH-HHHH-------HhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCH
Confidence 377888999999999998876 2210 11111 111112233333333334445555555633 2344
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhc
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEM 113 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m 113 (176)
..-...+..+.+.|+-++|.++|=+.
T Consensus 92 ~~~r~~v~~L~rLg~~~~A~~lfL~~ 117 (235)
T 2d2s_A 92 VHLKSGTENMIKLGLPEQALDLFLQN 117 (235)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChhHHHHHHHHH
Confidence 55566678889999999999888554
No 332
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=41.69 E-value=53 Score=22.30 Aligned_cols=21 Identities=10% Similarity=0.154 Sum_probs=12.1
Q ss_pred HHHHhcCChHHHHHHHHHHhh
Q 036589 59 TKLGRAKMFDEMQQILHQLKH 79 (176)
Q Consensus 59 ~~~~~~g~~~~a~~~~~~m~~ 79 (176)
..|.+.|.+++|.+++++...
T Consensus 125 ~VCiekg~Fk~A~eiLkr~f~ 145 (211)
T 3bqo_A 125 AVCMENGNFKEAEEVFERIFG 145 (211)
T ss_dssp HHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHccchHHHHHHHHHHhc
Confidence 445566666666666666443
No 333
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=41.03 E-value=24 Score=18.01 Aligned_cols=22 Identities=14% Similarity=0.154 Sum_probs=14.4
Q ss_pred CcHHHHHHHHHHHHhccccccch
Q 036589 136 GKLDRMKELFISFNLKAIAVLDG 158 (176)
Q Consensus 136 g~~~~a~~l~~~m~~~~~~~p~~ 158 (176)
.++.+|.++++.+...|-. |..
T Consensus 7 RDv~RaiELle~lq~sgev-p~~ 28 (53)
T 1zl8_A 7 RDVQRILELMEHVQKTGEV-NNA 28 (53)
T ss_dssp HHHHHHHHHHHHHGGGSSS-THH
T ss_pred HHHHHHHHHHHHHHHcCCC-CcH
Confidence 4566777777777766665 543
No 334
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=39.45 E-value=86 Score=21.15 Aligned_cols=89 Identities=2% Similarity=-0.155 Sum_probs=48.1
Q ss_pred CCCCchHHHHHHHHHHHhccCHHHHHH-----------HHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 82 RVIPEEIIFCNVISFYGRARLLEHALQ-----------VFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~g~~~~a~~-----------~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
...|....|...+...+..|++.+++. +-+.+.+.+..+....|..-|..|...+-.+.+..+.+.+.+
T Consensus 108 ~~~p~~~aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~~~~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~ 187 (221)
T 3ibx_A 108 CPTLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALEHAFYGHWIKGYSSKEFQACVNWNINLLDS 187 (221)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCHHHHHHHTHHHHHHHHHHHHHHTCSSSTTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 345667788888877777888776542 223333332112245677888888753322233333333333
Q ss_pred ccccccchHHHHHHHHHhhcc
Q 036589 151 KAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 151 ~~~~~p~~~t~~~li~~~~~~ 171 (176)
.... .+......+...|.++
T Consensus 188 ~~~~-~~~~~~~~~~~~F~~a 207 (221)
T 3ibx_A 188 LTLA-SSKQEIEKLKEIFITT 207 (221)
T ss_dssp HCTT-CCHHHHHHHHHHHHHH
T ss_pred HHhh-CCHHHHHHHHHHHHHH
Confidence 3333 4555566666665544
No 335
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=38.32 E-value=76 Score=20.21 Aligned_cols=93 Identities=6% Similarity=0.074 Sum_probs=51.5
Q ss_pred HHHHHHHHHhccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH--------------hcC--ChHHHHH
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLG--------------RAK--MFDEMQQ 72 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~--------------~~g--~~~~a~~ 72 (176)
++.+...+...|-+++.+.-+.+|..+. +...+..++..|. ..+ +++.+.+
T Consensus 10 ~~~~~~~l~~~g~LD~~f~qL~~L~~~~-------------~~~~~~ell~~Fl~d~~~~l~~L~~al~~~~~D~~~l~~ 76 (153)
T 3us6_A 10 WVDYIKSMFMEGFLDGQFLQLQQLQDEN-------------NPEFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDA 76 (153)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHTCBTT-------------BTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHH
T ss_pred HHHHHHhcccccchHHHHHHHHHhhcCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHH
Confidence 4566777788888887777777772221 3334444444443 233 5666666
Q ss_pred HHHHHhhcCC-C-CCchHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 73 ILHQLKHDTR-V-IPEEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 73 ~~~~m~~~~g-~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
.-+.++.+.+ + -........-+..+++.|+.+.+...+..+.
T Consensus 77 ~aH~LKGss~~lGa~~l~~~c~~lE~~~~~~~~~~~~~~l~~l~ 120 (153)
T 3us6_A 77 HVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRCLQQVK 120 (153)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 6666664411 0 0111222334566667777777666666665
No 336
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=37.91 E-value=84 Score=24.21 Aligned_cols=63 Identities=11% Similarity=0.054 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc--------HhHHHHHH-HHHHhcCcHHHHHHHHHHHHh
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT--------VKSLNTLL-NALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~--------~~~~~~ll-~~~~~~g~~~~a~~l~~~m~~ 150 (176)
...|.|.+.|.+.++...|..+++.+...+..|+ .++|.-.+ ..++-.+++.+|.+-|.....
T Consensus 177 ~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~ 248 (455)
T 3t5v_B 177 YLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQ 248 (455)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 4567899999999999999999999886655332 34555554 445668888888877766544
No 337
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=37.68 E-value=99 Score=21.31 Aligned_cols=54 Identities=15% Similarity=0.316 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHhhcCCC-CCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc
Q 036589 67 FDEMQQILHQLKHDTRV-IPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT 121 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~ 121 (176)
.++...+|..|... |+ .--...|-.....+...|++.+|.++|+.=.+.+-.|-
T Consensus 130 ~~~p~~if~~L~~~-~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 184 (223)
T 4aez_C 130 IDEPVELFSFLAHH-HIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPF 184 (223)
T ss_dssp CSCHHHHHHHHHHT-TCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSH
T ss_pred cCCHHHHHHHHHHC-CcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 34667788888888 65 44455667788888999999999999998777665663
No 338
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=37.44 E-value=39 Score=22.34 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=34.0
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDR 140 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~ 140 (176)
....++.++..+++---+++++..+.+....| ..+..+|---.+.+++...+.+
T Consensus 110 ~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g-~I~ld~ylK~vR~LaReQF~~r 163 (174)
T 2p22_A 110 KTDGLNQLYNLVAQDYALTDTIECLSRMLHRG-TIPLDTFVKQGRELARQQFLVR 163 (174)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777777777777777666 3455555555555555444433
No 339
>1dp3_A TRAM protein; helix-loop-helix, DNA binding protein; NMR {Escherichia coli} SCOP: a.55.1.2
Probab=37.02 E-value=8.3 Score=20.10 Aligned_cols=39 Identities=8% Similarity=0.241 Sum_probs=27.4
Q ss_pred hcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC
Q 036589 63 RAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL 102 (176)
Q Consensus 63 ~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~ 102 (176)
+..=.++...+.++=++. |..+..+.|+++...+.+.|.
T Consensus 8 s~~v~~~I~~ive~r~qe-GA~~~dvs~Ssv~smLleLGL 46 (55)
T 1dp3_A 8 SDEIVYKINKIVERRRAE-GAKSTDVSFSSISTMLLELGL 46 (55)
T ss_dssp CCTHHHHHHHHHHHHHHH-TCCSTTCCHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHc-CCCcccccHHHHHHHHHHHhH
Confidence 333456666777777777 888888888888887766653
No 340
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=36.61 E-value=34 Score=15.66 Aligned_cols=22 Identities=18% Similarity=0.179 Sum_probs=15.9
Q ss_pred HHHHHhcCChHHHHHHHHHHhh
Q 036589 58 ITKLGRAKMFDEMQQILHQLKH 79 (176)
Q Consensus 58 i~~~~~~g~~~~a~~~~~~m~~ 79 (176)
+..|...|..++|+.+-++++.
T Consensus 9 ~eYYrsiG~~~eAeaIe~q~k~ 30 (33)
T 2bn5_A 9 AEYYRSVGKIEEAEAIEKTLKN 30 (33)
T ss_dssp HHHHHHHTCHHHHHHHHHHHTC
T ss_pred HHHHHHcccHHHHHHHHHHHHh
Confidence 5566777888888877777764
No 341
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=36.33 E-value=87 Score=20.27 Aligned_cols=26 Identities=8% Similarity=0.100 Sum_probs=22.6
Q ss_pred HHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 90 FCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 90 ~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
...+|+=|...|+.++|.+.++++..
T Consensus 13 ~~~ii~EYf~~~D~~Ea~~~l~eL~~ 38 (165)
T 2rg8_A 13 LTPIIQEYFEHGDTNEVAEMLRDLNL 38 (165)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCC
Confidence 35688899999999999999999874
No 342
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=36.09 E-value=81 Score=19.86 Aligned_cols=65 Identities=11% Similarity=0.028 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 50 NLLHYDLIITKLGRA-KMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 50 ~~~~y~~li~~~~~~-g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
+..-+..++..+... .....+..+|+.+-....-..+..-|..++.........++...+|+.+-
T Consensus 37 ~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D 102 (183)
T 1s6c_A 37 NEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYD 102 (183)
T ss_dssp CHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhC
Confidence 445555555544433 23455666776665542234455555555554444444455666666655
No 343
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=35.74 E-value=1.1e+02 Score=21.24 Aligned_cols=86 Identities=5% Similarity=-0.134 Sum_probs=43.9
Q ss_pred CCCchHHHHHHHHHHHhc-cCHHHHHH-----------HHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHH-HHHHHH
Q 036589 83 VIPEEIIFCNVISFYGRA-RLLEHALQ-----------VFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKE-LFISFN 149 (176)
Q Consensus 83 ~~~~~~~~~~li~~~~~~-g~~~~a~~-----------~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~-l~~~m~ 149 (176)
..|....|+..+...+.. |++.+++. +-+.+.+.+..+....|..-|..|. ..+.++.+ +.+.+.
T Consensus 125 ~~p~~~aYt~~ll~~a~~~g~~~~~laAl~PC~w~Y~eig~~l~~~~~~~~~~~Y~~WI~~Y~--~ef~~~v~~~~~~ld 202 (248)
T 3no6_A 125 WPPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVYAVIGKRAMEDPKLNKESVTSKWFQFYS--TEMDELVDVFDQLMD 202 (248)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSTHHHHHHHTHHHHHHHHHHHHHHHCTTCCTTSTTHHHHHHHH--HHTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 345566777777766666 77665542 2233333322113356778888887 34444333 333333
Q ss_pred hccccccchHHHHHHHHHhhcc
Q 036589 150 LKAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 150 ~~~~~~p~~~t~~~li~~~~~~ 171 (176)
+.... .+......+...|.++
T Consensus 203 ~~~~~-~s~~~~~~l~~~F~~a 223 (248)
T 3no6_A 203 RLTKH-CSETEKKEIKENFLQS 223 (248)
T ss_dssp HHTTT-CCHHHHHHHHHHHHHH
T ss_pred HHhhh-CCHHHHHHHHHHHHHH
Confidence 33333 4444555555555543
No 344
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=33.34 E-value=1.1e+02 Score=20.55 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=35.1
Q ss_pred HHHhccCHHHHHHHHHhcccCCCCc----------------c-HhHHHHHHHHHHhcCcHHHHHHHHHH
Q 036589 96 FYGRARLLEHALQVFDEMPSFNVQR----------------T-VKSLNTLLNALLTCGKLDRMKELFIS 147 (176)
Q Consensus 96 ~~~~~g~~~~a~~~~~~m~~~~~~p----------------~-~~~~~~ll~~~~~~g~~~~a~~l~~~ 147 (176)
+|-+..++..|+..++.+....+.. | ...|+.+...|...|+.++|+..|..
T Consensus 71 Cy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~ 139 (242)
T 3kae_A 71 CYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVR 139 (242)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhh
Confidence 5556667777777776666433331 1 24466777788889999999988865
No 345
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=33.29 E-value=1.4e+02 Score=21.86 Aligned_cols=66 Identities=8% Similarity=-0.066 Sum_probs=41.5
Q ss_pred HHHHHhcccCCCCcc--HhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhccc
Q 036589 107 LQVFDEMPSFNVQRT--VKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDSQV 172 (176)
Q Consensus 107 ~~~~~~m~~~~~~p~--~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~~g 172 (176)
.++-.-+-...++|. .-+...-|..+.|.+++..|..+-+++.+.+...+-...-..++..+.+.+
T Consensus 190 lELAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~qArkil~~ce~~~ 257 (325)
T 3mv2_A 190 LELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADSMA 257 (325)
T ss_dssp HHHHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCC
Confidence 333333333334443 344667778888999999999999999988765133444455666665543
No 346
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=32.91 E-value=1.2e+02 Score=21.06 Aligned_cols=87 Identities=14% Similarity=0.197 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC--CC----------ccHhHHHHHHHHHHhc
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN--VQ----------RTVKSLNTLLNALLTC 135 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~--~~----------p~~~~~~~ll~~~~~~ 135 (176)
++..+++....+..|+..+......+... -.|++..+...++.....+ +. +.......++.+...
T Consensus 164 ~~~~~~l~~~~~~~~~~i~~~~l~~l~~~--~~G~~r~~~~~l~~~~~~~~~i~~~~v~~~~~~~~~~~~~~l~~~~~~- 240 (319)
T 2chq_A 164 EAMKKRLLEICEKEGVKITEDGLEALIYI--SGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALK- 240 (319)
T ss_dssp HHHHHHHHHHHHTTCCCBCHHHHHHHHHT--TTTCHHHHHHHHHHHHHSSSCBCHHHHHHHTTCCCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHCCCCHHHHHHHHHHHHh-
Confidence 44445555554443666665555555432 2667777777666544221 11 112234455555543
Q ss_pred CcHHHHHHHHHHHHh-ccccccch
Q 036589 136 GKLDRMKELFISFNL-KAIAVLDG 158 (176)
Q Consensus 136 g~~~~a~~l~~~m~~-~~~~~p~~ 158 (176)
|+.++|.+++.++.. .|.. |..
T Consensus 241 ~~~~~a~~~l~~l~~~~g~~-~~~ 263 (319)
T 2chq_A 241 GNFMEARELLDRLMVEYGMS-GED 263 (319)
T ss_dssp TCHHHHHHHHHHHHHHSCCC-HHH
T ss_pred CCHHHHHHHHHHHHHHcCCC-HHH
Confidence 788899999988876 7776 543
No 347
>1wxp_A THO complex subunit 1; death domain, structural genomics, nuclear matrix, riken structural genomics/proteomics initiative, RSGI, transport protein; NMR {Homo sapiens}
Probab=32.82 E-value=77 Score=18.86 Aligned_cols=25 Identities=16% Similarity=0.119 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHhc
Q 036589 89 IFCNVISFYGRARLLEHALQVFDEM 113 (176)
Q Consensus 89 ~~~~li~~~~~~g~~~~a~~~~~~m 113 (176)
|...|+.++.+++.-+.|..+....
T Consensus 76 T~~~L~~AL~~~~~~dvae~l~~~~ 100 (110)
T 1wxp_A 76 TPENLINALNKSGLSDLAESLTNDN 100 (110)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHh
Confidence 4444555555555544444444433
No 348
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=32.39 E-value=78 Score=18.55 Aligned_cols=24 Identities=13% Similarity=-0.051 Sum_probs=16.7
Q ss_pred HHHHHHHHHhccCHHHHHHHHHhc
Q 036589 90 FCNVISFYGRARLLEHALQVFDEM 113 (176)
Q Consensus 90 ~~~li~~~~~~g~~~~a~~~~~~m 113 (176)
+.-..+.+.+.|++++|++..++.
T Consensus 18 ~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHH
Confidence 344567778888888887766543
No 349
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=32.06 E-value=1.2e+02 Score=20.59 Aligned_cols=87 Identities=8% Similarity=-0.064 Sum_probs=49.9
Q ss_pred CCCCchHHHHHHHHHHHhc-cCHHHHHH-----------HHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHH-HHHHH
Q 036589 82 RVIPEEIIFCNVISFYGRA-RLLEHALQ-----------VFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKE-LFISF 148 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~-g~~~~a~~-----------~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~-l~~~m 148 (176)
...|....|...+...+.. |++.+++. +-+.+.+.+..+....|..-|..|. ..+..+.+ +.+.+
T Consensus 105 ~~~p~~~aY~~~l~~~a~~~~~~~~~~aAl~pC~~~Y~~ig~~l~~~~~~~~~~~y~~WI~~y~--~~f~~~v~~~~~~l 182 (229)
T 4fn6_A 105 VWPPSGDHYIKHMYFQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYS--TEMDDIINVFESLM 182 (229)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCSHHHHHHHHTHHHHHHHHHHHHHHTCTTCCTTSTHHHHHHHHT--TTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCChHHHHHHHHh--HHHHHHHHHHHHHH
Confidence 4567778888888877777 88777643 2233333332113457889999999 44444433 33333
Q ss_pred HhccccccchHHHHHHHHHhhcc
Q 036589 149 NLKAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 149 ~~~~~~~p~~~t~~~li~~~~~~ 171 (176)
.+.+.. .+......+...|.++
T Consensus 183 d~~~~~-~~~~~~~~~~~~F~~a 204 (229)
T 4fn6_A 183 NKLAES-MSDKELEQVKQVFLES 204 (229)
T ss_dssp HHHHTT-SCHHHHHHHHHHHHHH
T ss_pred HHHHhh-CCHHHHHHHHHHHHHH
Confidence 333333 4455566666655544
No 350
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=31.91 E-value=16 Score=19.21 Aligned_cols=12 Identities=25% Similarity=0.243 Sum_probs=6.1
Q ss_pred CHHHHHHHHHhc
Q 036589 102 LLEHALQVFDEM 113 (176)
Q Consensus 102 ~~~~a~~~~~~m 113 (176)
+++.|...|.+.
T Consensus 34 d~~~A~~~F~~~ 45 (57)
T 2jp7_A 34 NYEVAIKGFQSS 45 (57)
T ss_dssp CSHHHHHHHHHS
T ss_pred CHHHHHHHHHHH
Confidence 445555555554
No 351
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=31.80 E-value=88 Score=22.56 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=16.9
Q ss_pred CCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC
Q 036589 82 RVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN 117 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 117 (176)
|+.|...++.-++..+.+.=.++.+.++++.+...|
T Consensus 218 ~i~~~~~~~~W~l~lF~~~lp~~~~lrlwD~~l~~g 253 (331)
T 3qye_A 218 EIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQG 253 (331)
T ss_dssp TCCGGGTSHHHHHSTTTTTSCHHHHHHHHHHHHHHC
T ss_pred CCChHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHCC
Confidence 444444444444444444444455555555444433
No 352
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=31.33 E-value=1.2e+02 Score=20.54 Aligned_cols=85 Identities=13% Similarity=0.128 Sum_probs=49.5
Q ss_pred CChHHHHHHHHHHhhcCCCCCchHHHHH--HHHHHHhc--cC--------------HHHHHHHHHhcccCCCCccHh---
Q 036589 65 KMFDEMQQILHQLKHDTRVIPEEIIFCN--VISFYGRA--RL--------------LEHALQVFDEMPSFNVQRTVK--- 123 (176)
Q Consensus 65 g~~~~a~~~~~~m~~~~g~~~~~~~~~~--li~~~~~~--g~--------------~~~a~~~~~~m~~~~~~p~~~--- 123 (176)
++|.+...+.+.+... ....+...--. +++.+.|. |+ ++-|+.+|+.+...--.+-..
T Consensus 39 ~dFrq~rdi~eall~~-~~~~~a~~~k~i~icQfL~RI~eG~~LD~~Fd~d~~lTPLESAl~v~~~I~~e~~~lheei~~ 117 (211)
T 3bqo_A 39 EDFRRTRNSAEAIIHG-LSSLTACQLRTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQN 117 (211)
T ss_dssp HHHHHHHHHHHHHHHT-CSCCCHHHHHHHHHHHHHHHHHTTTCTTEECSSSTTCCHHHHHHHHHTTSCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-cccccccccchHHHHHHHHHHHcCCCCCCccCCCCCCChHHHHHHHHHHHHHhcccHHHHHHH
Confidence 4456666666666643 33334432222 44444442 22 688999999998543111111
Q ss_pred -HHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 124 -SLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 124 -~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
.--..+-.|.+.|.+++|.++|++.-.
T Consensus 118 Llk~qAV~VCiekg~Fk~A~eiLkr~f~ 145 (211)
T 3bqo_A 118 LIKIQAIAVCMENGNFKEAEEVFERIFG 145 (211)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhc
Confidence 112344678899999999999999543
No 353
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=29.88 E-value=1.6e+02 Score=21.36 Aligned_cols=23 Identities=17% Similarity=0.007 Sum_probs=10.8
Q ss_pred cHhHHHHHHHHHHhcCcHHHHHH
Q 036589 121 TVKSLNTLLNALLTCGKLDRMKE 143 (176)
Q Consensus 121 ~~~~~~~ll~~~~~~g~~~~a~~ 143 (176)
++.....+-..|.+.|++.+|..
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~ 155 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAER 155 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHH
Confidence 33344444445555555555444
No 354
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=29.24 E-value=87 Score=20.67 Aligned_cols=50 Identities=12% Similarity=-0.128 Sum_probs=41.6
Q ss_pred CccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhhc
Q 036589 119 QRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMNDS 170 (176)
Q Consensus 119 ~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~~ 170 (176)
.|....++-|+..++...-++.++-.+.+....|.. +..+|---+..++|
T Consensus 108 ~~~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g~I--~ld~ylK~vR~LaR 157 (174)
T 2p22_A 108 VAKTDGLNQLYNLVAQDYALTDTIECLSRMLHRGTI--PLDTFVKQGRELAR 157 (174)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHH
Confidence 345567899999999999999999999999999875 78888777766665
No 355
>3cqc_A Nuclear pore complex protein NUP107; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3i4r_A 3cqg_A
Probab=29.07 E-value=30 Score=24.62 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=28.9
Q ss_pred HHHHHHhhcCCCCCchHHH-HHHHHHHHhccCHHHHHHHHHhcc
Q 036589 72 QILHQLKHDTRVIPEEIIF-CNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 72 ~~~~~m~~~~g~~~~~~~~-~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
+-++++.-..+..++.... |.|++.+..+|++..|.++|+.+.
T Consensus 18 rslEWL~~~~~q~~eal~~~n~l~R~FL~~gkl~AAr~l~~rlp 61 (270)
T 3cqc_A 18 DVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIP 61 (270)
T ss_dssp HHHHHHHHSGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHhHHhcChhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHCC
Confidence 3444553221334444433 778899999999999999999876
No 356
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=29.02 E-value=1.6e+02 Score=20.98 Aligned_cols=96 Identities=13% Similarity=0.146 Sum_probs=51.5
Q ss_pred HHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccC--------CCCcc----------HhHHHHHHH
Q 036589 69 EMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSF--------NVQRT----------VKSLNTLLN 130 (176)
Q Consensus 69 ~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~--------~~~p~----------~~~~~~ll~ 130 (176)
+...++.......++..+......++... .|++..+..+++..... .+.++ ......++.
T Consensus 196 ~~~~~l~~~~~~~~~~i~~~~l~~l~~~~--~G~~r~~~~~l~~~~~~~~~~~~~~~It~~~v~~~~~~~~~~~~~~l~~ 273 (353)
T 1sxj_D 196 NAIDRLRFISEQENVKCDDGVLERILDIS--AGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE 273 (353)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHT--SSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHTCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCHHHHHHHHHHHHHhcCCCccCccccHHHHHHHhCCCCHHHHHHHHH
Confidence 33344444333335555555555444432 36777776666554311 12111 112334444
Q ss_pred HHHhcCcHHHHHHHHHHHHhccccccchHHHHHHHHHhh
Q 036589 131 ALLTCGKLDRMKELFISFNLKAIAVLDGLCSNLKIIMND 169 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~~~~~~p~~~t~~~li~~~~ 169 (176)
++ ..++.++|..++.++...|.. |... +..++....
T Consensus 274 ~~-~~~~~~~a~~~l~~l~~~g~~-~~~i-~~~l~~~~~ 309 (353)
T 1sxj_D 274 KV-KSGDFDEIKKYVNTFMKSGWS-AASV-VNQLHEYYI 309 (353)
T ss_dssp HH-HSCCHHHHHHHHHHHHHTSCC-CTTH-HHHHHHHHH
T ss_pred HH-hcCCHHHHHHHHHHHHHhCCC-HHHH-HHHHHHHHH
Confidence 44 468899999999999988887 6543 344444433
No 357
>3cqc_A Nuclear pore complex protein NUP107; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3i4r_A 3cqg_A
Probab=28.50 E-value=33 Score=24.37 Aligned_cols=24 Identities=13% Similarity=0.052 Sum_probs=22.2
Q ss_pred HHHHHHHHHhccChhHHHHhhcCC
Q 036589 9 PFRLASLLHLQKHPKLALQLFKNP 32 (176)
Q Consensus 9 ~~~l~~~~~~~~~~~~A~~~~~~~ 32 (176)
-|.|++.|...|++..|.++|+.+
T Consensus 37 ~n~l~R~FL~~gkl~AAr~l~~rl 60 (270)
T 3cqc_A 37 GNAIMRKFLASKKHEAAKEVFVKI 60 (270)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHC
Confidence 378999999999999999999987
No 358
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=28.19 E-value=1.2e+02 Score=19.50 Aligned_cols=92 Identities=9% Similarity=0.056 Sum_probs=52.0
Q ss_pred HHHhcCChHHHHHHHHHHhhcCCCC-CchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHh---HHHHHHHHHHh-
Q 036589 60 KLGRAKMFDEMQQILHQLKHDTRVI-PEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVK---SLNTLLNALLT- 134 (176)
Q Consensus 60 ~~~~~g~~~~a~~~~~~m~~~~g~~-~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~---~~~~ll~~~~~- 134 (176)
..++.|+++....++.. +.. .+...-.+.+...+..|+.+.-.++.+.+.+.|..++.. -++.|..++..
T Consensus 12 ~Aa~~g~~~~~~~l~~~-----~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 12 AAAMLGTYEDFLELFEK-----GYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGG 86 (186)
T ss_dssp HHHHHSCHHHHHHHHHH-----SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhc-----CcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 34577888886666543 221 221222345556667787776677777777777666543 23344433333
Q ss_pred cCcHHHHHHHHHHHHhccccccc
Q 036589 135 CGKLDRMKELFISFNLKAIAVLD 157 (176)
Q Consensus 135 ~g~~~~a~~l~~~m~~~~~~~p~ 157 (176)
..+.....++.+.+.+.|.. ++
T Consensus 87 ~~~~~~~~~iv~~Ll~~Gad-in 108 (186)
T 3t8k_A 87 GNDITGTTELCKIFLEKGAD-IT 108 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCC-SS
T ss_pred CcchhhHHHHHHHHHHCCCC-CC
Confidence 33455556677777776655 44
No 359
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=28.06 E-value=65 Score=21.46 Aligned_cols=24 Identities=25% Similarity=0.283 Sum_probs=17.4
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHH
Q 036589 126 NTLLNALLTCGKLDRMKELFISFN 149 (176)
Q Consensus 126 ~~ll~~~~~~g~~~~a~~l~~~m~ 149 (176)
-.+|.++...|++++|.+++.++.
T Consensus 36 LqvI~GLlql~~ydea~~yI~~~~ 59 (192)
T 1ixm_A 36 LQLIKGNLSLQKYDRVFEMIEEMV 59 (192)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 356777777888888877776654
No 360
>2ve8_A FTSK, DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA-binding, winged helix, bacterial cell division; HET: DNA; 1.4A {Pseudomonas aeruginosa} SCOP: a.4.5.67 PDB: 2ve9_A* 2j5o_A*
Probab=27.96 E-value=55 Score=18.18 Aligned_cols=43 Identities=12% Similarity=0.272 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 103 LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 103 ~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
+++|.++.-+-.. .+ .++|.--.+-| +.+|.++.+.|.+.|+.
T Consensus 12 y~~A~~~V~~~~~----aS----~S~lQR~lrIG-YnRAArlid~lE~~GiV 54 (73)
T 2ve8_A 12 YDEAVRFVTESRR----AS----ISAVQRKLKIG-YNRAARMIEAMEMAGVV 54 (73)
T ss_dssp HHHHHHHHHHHCC----CC----HHHHHHHHTCC-HHHHHHHHHHHHHTTSB
T ss_pred HHHHHHHHHhcCC----cc----HHHHHHHHccC-hHHHHHHHHHHHHCCcC
Confidence 5666666655442 12 23333333333 66788899999888875
No 361
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=27.94 E-value=39 Score=20.95 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHH
Q 036589 54 YDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQV 109 (176)
Q Consensus 54 y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~ 109 (176)
|-..|...+..++.+-|+++++...+. | +...|.+.+..|...=+++.++++
T Consensus 35 ykDAietAa~S~d~elaEeLL~yFVe~-g---~kEcF~A~LytCYdLlrpDvVLEl 86 (125)
T 3qil_A 35 YKDAMQYASESKDTELAEELLQWFLQE-E---KRECFGACLFTCYDLLRPDVVLEL 86 (125)
T ss_dssp SSHHHHTTTSSCCSHHHHHHHHHHTTS-C---SHHHHHHHHHHHTTCSCTTHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc-C---chHHHHHHHHHHHhccChHHHHHH
Confidence 445777888899999999999999987 4 677788888887777777766654
No 362
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=27.90 E-value=1.2e+02 Score=19.25 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=10.4
Q ss_pred HhccChhHHHHhhcCC
Q 036589 17 HLQKHPKLALQLFKNP 32 (176)
Q Consensus 17 ~~~~~~~~A~~~~~~~ 32 (176)
+..|+.+....++..-
T Consensus 13 ~~~g~~~~v~~ll~~~ 28 (201)
T 3hra_A 13 ANQRDTKKVKEILQDT 28 (201)
T ss_dssp HHTTCHHHHHHHHTCT
T ss_pred HHhccHHHHHHHHHcC
Confidence 3467777777776654
No 363
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=27.66 E-value=1e+02 Score=18.30 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=15.0
Q ss_pred HHHHHhcccCCCCccHhHHHHHHHHHHhcC
Q 036589 107 LQVFDEMPSFNVQRTVKSLNTLLNALLTCG 136 (176)
Q Consensus 107 ~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g 136 (176)
.++-+++...|+.|+.....-++..|...+
T Consensus 29 e~L~eEfdefGi~~~d~VldKc~ELC~~y~ 58 (101)
T 2keb_A 29 QQLAEELQIFGLDCEEALIEKLVELCVQYG 58 (101)
T ss_dssp HHHHHHHHHHTCBCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHcC
Confidence 344444445555555555555555554443
No 364
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=27.39 E-value=93 Score=22.10 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhc
Q 036589 65 KMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEM 113 (176)
Q Consensus 65 g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m 113 (176)
.+|...-.++..|.....-.|+......++++|.+.-+-..|.+.++.-
T Consensus 187 eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL~~~ 235 (268)
T 2fv2_A 187 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQC 235 (268)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHHHHh
Confidence 4455555555555554334555566666666666666655555555543
No 365
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=27.26 E-value=1.6e+02 Score=20.55 Aligned_cols=84 Identities=5% Similarity=-0.129 Sum_probs=45.0
Q ss_pred CCCCchHHHHHHHHHHHhccCHHHHHHHH-----------HhcccCCCCccHhHHHHHHHHHHhcCc---HHHHHHHHHH
Q 036589 82 RVIPEEIIFCNVISFYGRARLLEHALQVF-----------DEMPSFNVQRTVKSLNTLLNALLTCGK---LDRMKELFIS 147 (176)
Q Consensus 82 g~~~~~~~~~~li~~~~~~g~~~~a~~~~-----------~~m~~~~~~p~~~~~~~ll~~~~~~g~---~~~a~~l~~~ 147 (176)
...|....|...+...+..|++.+++..+ +.+.+. ..|+ ..|...|+.|...+. .....+++++
T Consensus 131 ~~~pat~aYt~~l~~~a~~g~~~~~laAl~pC~w~Y~~ig~~l~~~-~~~~-~~Y~~WI~~y~~~df~~~v~~~~~lld~ 208 (263)
T 2qcx_A 131 KPSPTAYSFTSHMYRSVLSGNFAEILAALLPCYWLYYEVGEKLLHC-DPGH-PIYQKWIGTYGGDWFRQQVEEQINRFDE 208 (263)
T ss_dssp CCCHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHTTC-CCCS-HHHHHHHHHHSSHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC-cHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 34466777888877778888876654322 222222 1244 667788887766432 3333344444
Q ss_pred HHhccccccchHHHHHHHHHhhcc
Q 036589 148 FNLKAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 148 m~~~~~~~p~~~t~~~li~~~~~~ 171 (176)
+.+ . ++......+...+.+.
T Consensus 209 l~~---~-~s~~~~~~l~~~F~~a 228 (263)
T 2qcx_A 209 LAE---N-STEEVRAKMKENFVIS 228 (263)
T ss_dssp HHH---T-SCHHHHHHHHHHHHHH
T ss_pred HHh---h-CCHHHHHHHHHHHHHH
Confidence 332 2 3444445555555443
No 366
>4f52_E Glomulin; cullin-ring E3 ligase, inhibitor, cell cycle-ligase-signalin complex; 3.00A {Homo sapiens}
Probab=27.08 E-value=1.4e+02 Score=23.99 Aligned_cols=27 Identities=11% Similarity=0.164 Sum_probs=12.0
Q ss_pred cHHHHHHHHHHHHhcCChHHHHHHHHH
Q 036589 50 NLLHYDLIITKLGRAKMFDEMQQILHQ 76 (176)
Q Consensus 50 ~~~~y~~li~~~~~~g~~~~a~~~~~~ 76 (176)
|..+|-..++.|...|....+.+++++
T Consensus 27 d~~~f~~~~~~~l~~g~~~~l~eilqD 53 (596)
T 4f52_E 27 DFGLFQLAGQRCIEEGHTDQLLEIIQN 53 (596)
T ss_dssp --CHHHHHHHHHHSSSCSHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHhC
Confidence 333444444555555555544444444
No 367
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=26.97 E-value=1.5e+02 Score=19.96 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=53.9
Q ss_pred hccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCC------------
Q 036589 18 LQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIP------------ 85 (176)
Q Consensus 18 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~------------ 85 (176)
-.|.+.+++-++... .. .+..-|- --+|-+.+++..|...++.+... .+..
T Consensus 45 yngEY~R~Lf~L~~l-NT-------------~Ts~YYk--~LCy~klKdYkkA~~~le~il~~-kvd~d~~~d~~~~~ff 107 (242)
T 3kae_A 45 LNGEYTRALFHLHKL-NT-------------CTSKYYE--SLCYKKKKDYKKAIKSLESILEG-KVERDPDVDARIQEMF 107 (242)
T ss_dssp HTTCHHHHHHHHHTC-CB-------------HHHHHHH--HHHHHHTTCHHHHHHHHHHHHTT-CSBCCCCCCHHHHTTS
T ss_pred hcchHhHHHHHHHhc-ch-------------HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhc-ccccCcccccccceee
Confidence 368888888888777 11 1233333 23677899999999999999865 3331
Q ss_pred ----c-hHHHHHHHHHHHhccCHHHHHHHHH
Q 036589 86 ----E-EIIFCNVISFYGRARLLEHALQVFD 111 (176)
Q Consensus 86 ----~-~~~~~~li~~~~~~g~~~~a~~~~~ 111 (176)
| ...|+-+...+...|+-++|+..|.
T Consensus 108 vd~~DkEfFy~l~a~lltq~g~r~EaI~y~~ 138 (242)
T 3kae_A 108 VDPGDEEFFESLLGDLCTLSGYREEGIGHYV 138 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHhcCHHHhhhHhh
Confidence 2 2455667777888999999998774
No 368
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=26.32 E-value=91 Score=17.40 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=23.9
Q ss_pred hcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcc
Q 036589 63 RAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMP 114 (176)
Q Consensus 63 ~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 114 (176)
.....++..++|+.+-....-..+..-+..++..+...-.-+++.++|+.+-
T Consensus 24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D 75 (94)
T 2kz2_A 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 75 (94)
T ss_dssp CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 3344555666666664442223344444444443322223445555555554
No 369
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=25.95 E-value=1.7e+02 Score=20.42 Aligned_cols=86 Identities=7% Similarity=0.154 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCC------------CccHhHHHHHHHHHHhc
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNV------------QRTVKSLNTLLNALLTC 135 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~------------~p~~~~~~~ll~~~~~~ 135 (176)
++..+++....+..|+..+......+.... .|++..+..+++......- .+.......++.... .
T Consensus 172 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~--~g~~r~~~~~l~~~~~~~~~i~~~~v~~~~~~~~~~~i~~l~~~~~-~ 248 (327)
T 1iqp_A 172 EDIAKRLRYIAENEGLELTEEGLQAILYIA--EGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLAL-K 248 (327)
T ss_dssp HHHHHHHHHHHHTTTCEECHHHHHHHHHHH--TTCHHHHHHHHHHHHTTCSEECHHHHHHHTTCCCHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHC--CCCHHHHHHHHHHHHhcCCCCCHHHHHHHHCCCCHHHHHHHHHHHH-c
Confidence 444455555544436555555555555432 6788888877766542221 112223334455443 3
Q ss_pred CcHHHHHHHHHHHH-hccccccc
Q 036589 136 GKLDRMKELFISFN-LKAIAVLD 157 (176)
Q Consensus 136 g~~~~a~~l~~~m~-~~~~~~p~ 157 (176)
++++++.+.++++. ..|.. |.
T Consensus 249 ~~~~~~~~~~~~ll~~~g~~-~~ 270 (327)
T 1iqp_A 249 GNFLKAREKLREILLKQGLS-GE 270 (327)
T ss_dssp TCHHHHHHHHHHHHHHHCCC-HH
T ss_pred CCHHHHHHHHHHHHHHcCCC-HH
Confidence 78899999998887 77776 54
No 370
>1rw2_A ATP-dependent DNA helicase II, 80 kDa subunit; KU80, NHEJ, structure, DNA-PK, DNA binding protein; NMR {Homo sapiens} SCOP: a.118.19.1
Probab=25.91 E-value=24 Score=22.77 Aligned_cols=50 Identities=12% Similarity=0.204 Sum_probs=31.6
Q ss_pred cCHHHHHHHHHhcccCCCC-ccHhHHHHHHHHHHh---cCcHHHHHHHHHHHHhccc
Q 036589 101 RLLEHALQVFDEMPSFNVQ-RTVKSLNTLLNALLT---CGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 101 g~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~~~~~---~g~~~~a~~l~~~m~~~~~ 153 (176)
..+++|.+++..|++.-+. -.+..||.+|..+-. .++. .+++..+++.++
T Consensus 72 ~~y~KA~ecL~~lR~~~i~~~ep~~yN~Fl~~LK~~l~~~~l---~~FW~~Iv~~~l 125 (152)
T 1rw2_A 72 PYFMKSIDCIRAFREEAIKFSEEQRFNNFLKALQEKVEIKQL---NHFWEIVVQDGI 125 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHSCC---HHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhH---HHHHHHHHHCCc
Confidence 3588899999888854332 367789999987753 3444 344444555444
No 371
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=24.95 E-value=3.3e+02 Score=23.40 Aligned_cols=118 Identities=12% Similarity=0.049 Sum_probs=67.2
Q ss_pred hccChhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHH---HHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHH
Q 036589 18 LQKHPKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYD---LIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVI 94 (176)
Q Consensus 18 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~---~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li 94 (176)
-.|+.+.+..+++.+ ... ..| ..-|. ++.-+|+..|+.....++++.+... ...++.-...+-
T Consensus 536 ~~g~~e~~~~li~~L-~~~----------~dp-~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d--~~d~VRraAVia 601 (963)
T 4ady_A 536 NYGRQELADDLITKM-LAS----------DES-LLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSD--SNDDVRRAAVIA 601 (963)
T ss_dssp TTTCGGGGHHHHHHH-HHC----------SCH-HHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHC--SCHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHH-HhC----------CCH-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccC--CcHHHHHHHHHH
Confidence 456666666666665 221 011 22233 2334566778888887888888865 223333333333
Q ss_pred HHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcH-HHHHHHHHHHHh
Q 036589 95 SFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKL-DRMKELFISFNL 150 (176)
Q Consensus 95 ~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~-~~a~~l~~~m~~ 150 (176)
-++...|+.+.+.++++.+.+.+ .|....--.+.-+....|.. .+|.+++..+..
T Consensus 602 LGlI~~g~~e~v~rlv~~L~~~~-d~~VR~gAalALGli~aGn~~~~aid~L~~L~~ 657 (963)
T 4ady_A 602 LGFVLLRDYTTVPRIVQLLSKSH-NAHVRCGTAFALGIACAGKGLQSAIDVLDPLTK 657 (963)
T ss_dssp HHHHTSSSCSSHHHHTTTGGGCS-CHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHT
T ss_pred HHhhccCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhccCCCcHHHHHHHHHHcc
Confidence 44445677777777777666544 35554444454555555543 567778877764
No 372
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.87 E-value=78 Score=17.46 Aligned_cols=38 Identities=21% Similarity=0.368 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHH
Q 036589 71 QQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFD 111 (176)
Q Consensus 71 ~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~ 111 (176)
+++|++|++...-.|+.+.-..+.. .+.+.+.+.+++.
T Consensus 11 ~qvfheLkQrFPEvPd~VVsqc~~q---N~~Nl~aC~~~L~ 48 (75)
T 2dae_A 11 FQVLHDLRQKFPEVPEVVVSRCMLQ---NNNNLDACCAVLS 48 (75)
T ss_dssp HHHHHHHHHHSSSSCHHHHHHHHTT---TTSCSHHHHHHHH
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHH---hccCHHHHHHHHH
Confidence 4677777777555566554443332 2344555555554
No 373
>4f52_E Glomulin; cullin-ring E3 ligase, inhibitor, cell cycle-ligase-signalin complex; 3.00A {Homo sapiens}
Probab=24.62 E-value=1.5e+02 Score=23.78 Aligned_cols=66 Identities=9% Similarity=0.107 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHhhcCCCCCch-HHHHHHHHHHHhccCHHHHHH-HHHhcccCCCCccHhHHHHHHHHHH
Q 036589 67 FDEMQQILHQLKHDTRVIPEE-IIFCNVISFYGRARLLEHALQ-VFDEMPSFNVQRTVKSLNTLLNALL 133 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~~~~~-~~~~~li~~~~~~g~~~~a~~-~~~~m~~~~~~p~~~~~~~ll~~~~ 133 (176)
|+-..-+...+... ...++. ...-.++...++.|++.+.+- +.+.+.+..-.-...+|+.|+.++.
T Consensus 65 WdLv~~lv~~l~~~-~~~~~~~~~s~~iL~~la~lcnPrEvil~llE~le~~~~~~~~~~f~~LL~~Lq 132 (596)
T 4f52_E 65 WNLVGPVVRCLLCK-DKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQSILLLLQPLQ 132 (596)
T ss_dssp GGGHHHHHHHHHTS-CCCSSSTHHHHHHHHHHHHHSCGGGHHHHHGGGGTSCCGGGHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhhc-cccccchhHHHHHHHHHHHhCCHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 44444444544433 233332 456667788888888877654 3344433322223455666676553
No 374
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=24.42 E-value=2.2e+02 Score=21.22 Aligned_cols=63 Identities=11% Similarity=0.057 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhcCC--hHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC
Q 036589 53 HYDLIITKLGRAKM--FDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN 117 (176)
Q Consensus 53 ~y~~li~~~~~~g~--~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 117 (176)
+|..+|..+....+ .+++..+++.+..- -.++...=..|+-.+.|--..++...+.+.|.+.+
T Consensus 25 t~~~il~~l~~g~~Ls~eEa~~~~~~i~~G--~~~~~QiaAfL~Alr~kGet~eEi~g~~~am~~~~ 89 (377)
T 3r88_A 25 SWPQILGRLTDNRDLARGQAAWAMDQIMTG--NARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHA 89 (377)
T ss_dssp CHHHHHHHHHTTCCCCTTHHHHHHHHHHTT--CSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhC
Confidence 45555555554444 34555555555543 22333333333333334334555555555554433
No 375
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=24.32 E-value=2e+02 Score=20.55 Aligned_cols=88 Identities=15% Similarity=0.178 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhhcCCCCCc-hHHHHHHHHHHHhccCHHHHHHHHHhcccCC---C-------CccH-hHHHHHHHHHHhc
Q 036589 68 DEMQQILHQLKHDTRVIPE-EIIFCNVISFYGRARLLEHALQVFDEMPSFN---V-------QRTV-KSLNTLLNALLTC 135 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~---~-------~p~~-~~~~~ll~~~~~~ 135 (176)
++..++++...+..|+..+ ......++... .|++..|...++.....+ + .++. .....+++.....
T Consensus 196 ~~~~~~l~~~~~~~~~~~~~~~~l~~i~~~~--~G~~r~a~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~i~~~ 273 (354)
T 1sxj_E 196 SEISTILSDVVTNERIQLETKDILKRIAQAS--NGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKE 273 (354)
T ss_dssp HHHHHHHHHHHHHHTCEECCSHHHHHHHHHH--TTCHHHHHHHHTHHHHTTTTEECSSCCCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCCCcHHHHHHHHHHc--CCCHHHHHHHHHHHHHhCCCCcCcCcCCCCccHHHHHHHHHHHHHHh
Confidence 3455555554433366544 44455555432 789999999888665322 1 1211 2234566766654
Q ss_pred ---CcHHHHHHHHHHHHhccccccch
Q 036589 136 ---GKLDRMKELFISFNLKAIAVLDG 158 (176)
Q Consensus 136 ---g~~~~a~~l~~~m~~~~~~~p~~ 158 (176)
+.++.+.+.+.++...|++ |..
T Consensus 274 ~~~~~~~~~~~~l~~l~~~g~~-~~~ 298 (354)
T 1sxj_E 274 RSVNSLIECRAVLYDLLAHCIP-ANI 298 (354)
T ss_dssp CSHHHHHHHHHHHHHHHTTTCC-HHH
T ss_pred cchhHHHHHHHHHHHHHHcCCC-HHH
Confidence 4566777777777777876 554
No 376
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=24.29 E-value=2e+02 Score=20.75 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=47.0
Q ss_pred HHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCcc-HhHH--HHHHHH----HHhcCcHHHHHHHH
Q 036589 73 ILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRT-VKSL--NTLLNA----LLTCGKLDRMKELF 145 (176)
Q Consensus 73 ~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~-~~~~--~~ll~~----~~~~g~~~~a~~l~ 145 (176)
+++.+.+. |+.|...++.-++-.+.+.=.++.+..+++.+...|.... ...| -+++.. +....+++++..++
T Consensus 231 L~~hL~~~-~i~~~~f~~~W~~~lF~~~~p~~~~lrlWD~~l~~g~~~~~~~~~v~~AiL~~~~~~ll~~~d~~~il~~L 309 (345)
T 2qfz_A 231 VHRHLDQH-EVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFL 309 (345)
T ss_dssp HHHHHHHT-TCCHHHHHHHHHHTTTTTTSCHHHHHHHHHHHTTSTTTTTTHHHHHHHHHHHHTHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHc-CCchhhHHHHHHHHHHcccCCHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 44445555 7777777777777777777778888888888887664332 2112 122222 22346677777666
Q ss_pred HHHHh
Q 036589 146 ISFNL 150 (176)
Q Consensus 146 ~~m~~ 150 (176)
..+..
T Consensus 310 ~~~p~ 314 (345)
T 2qfz_A 310 QNLPT 314 (345)
T ss_dssp TSCSC
T ss_pred HcCCC
Confidence 65433
No 377
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=23.98 E-value=1.3e+02 Score=18.19 Aligned_cols=19 Identities=16% Similarity=0.364 Sum_probs=11.2
Q ss_pred HHHHHhcCChHHHHHHHHH
Q 036589 58 ITKLGRAKMFDEMQQILHQ 76 (176)
Q Consensus 58 i~~~~~~g~~~~a~~~~~~ 76 (176)
+...++.|+.+.+..+++.
T Consensus 6 L~~A~~~g~~~~v~~ll~~ 24 (156)
T 1bd8_A 6 LSGAAARGDVQEVRRLLHR 24 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHh
Confidence 4444556666666666655
No 378
>1q2z_A ATP-dependent DNA helicase II, 80 kDa subunit; KU, DNA repair, protein structure, spectroscopy, DNA-PK, KU86, KU80, protein binding; NMR {Homo sapiens} SCOP: a.118.19.1
Probab=23.84 E-value=1.3e+02 Score=18.29 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=18.1
Q ss_pred CHHHHHHHHHhcccCCCC-ccHhHHHHHHHHHHh
Q 036589 102 LLEHALQVFDEMPSFNVQ-RTVKSLNTLLNALLT 134 (176)
Q Consensus 102 ~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~~~~~ 134 (176)
.+++|.+++..|++.-+. -.+..||..|..+-.
T Consensus 42 ~y~ka~ecl~~~R~~~i~~~ep~~yN~Fl~~Lk~ 75 (120)
T 1q2z_A 42 YFMKSIDCIRAFREEAIKFSEEQRFNNFLKALQE 75 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Confidence 456666666666643222 245566666665554
No 379
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=23.65 E-value=1.3e+02 Score=18.31 Aligned_cols=62 Identities=5% Similarity=-0.047 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhcC--C-hHHHHH----HHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhccc
Q 036589 53 HYDLIITKLGRAK--M-FDEMQQ----ILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPS 115 (176)
Q Consensus 53 ~y~~li~~~~~~g--~-~~~a~~----~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 115 (176)
++..++..|...- + .+++.+ +|+.+... .+.|++..--.-|-.+...++++.|.++...+..
T Consensus 21 ~l~~~l~~~~~~~~k~~~~D~~KRL~~LfdkLn~~-~Ls~~v~~~L~~l~~al~~~dy~~A~~ih~~l~t 89 (118)
T 2yru_A 21 PLEQALEDCHGHTKKQVCDDISRRLALLREQWAGG-KLSIPVKKRMALLVQELLHHQWDAADDIHRSLMV 89 (118)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT-CSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4555666554321 1 333332 56666655 6766666555555556678899999998888774
No 380
>1jog_A Hypothetical protein HI0074; structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: a.24.16.2
Probab=23.23 E-value=95 Score=19.60 Aligned_cols=59 Identities=7% Similarity=0.095 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHhhcCCCCC---chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHH
Q 036589 67 FDEMQQILHQLKHDTRVIP---EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNT 127 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~g~~~---~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ 127 (176)
++.+.++.+...+..|+.+ +..++..+++...+.|-+++. +.+..|.... -..+++|+.
T Consensus 54 ~Elawk~~k~~L~~~g~~~~~~~~~s~rd~~r~a~~~GlI~d~-~~w~~m~~~R-N~tvH~Y~e 115 (146)
T 1jog_A 54 YELSLKMMKRQLQQDAINTDDIGAYGFKDILREALRFGLIGDM-SKWVAYRDMR-NITSHTYDQ 115 (146)
T ss_dssp HHHHHHHHHHHHHHHTCSCCCTTSCCHHHHHHHHHHTTSCSCH-HHHHHHHHHH-TTGGGTTSH
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCHHHHHHHHHHcCCCCcH-HHHHHHHHHh-hHhcccccH
Confidence 4556666666665546654 467788888888888887666 5566665322 135555554
No 381
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=23.21 E-value=3.2e+02 Score=22.59 Aligned_cols=46 Identities=11% Similarity=0.174 Sum_probs=26.3
Q ss_pred chHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHH
Q 036589 86 EEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALL 133 (176)
Q Consensus 86 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 133 (176)
+..--..++.+++...+.....++++.... +.. ...-...++.++.
T Consensus 648 ~~~~~~~~l~al~~~~~~~~~~~~l~~~~~-~~i-~~qd~~~~~~~~~ 693 (780)
T 1z5h_A 648 RDEDRVRIISAFGKLKSNTDLSTVYGMVEK-TEI-KKQDMISFFSSAL 693 (780)
T ss_dssp SHHHHHHHHHHHTTCCCHHHHHHHHHHHHT-TSS-CHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCHHHHHHHHHHHhc-CCC-CHHHHHHHHHHHH
Confidence 344456677777777777777777776665 322 2233344444443
No 382
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=23.18 E-value=86 Score=22.77 Aligned_cols=45 Identities=11% Similarity=0.117 Sum_probs=32.3
Q ss_pred HHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhccc
Q 036589 109 VFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAI 153 (176)
Q Consensus 109 ~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~ 153 (176)
+++.+.+.|+.|...++.-++..|.+.=.++.+.++++-+...|.
T Consensus 215 L~~hL~~~~i~~~~~~~~W~ltlF~~~lp~~~~lriWD~~l~eg~ 259 (334)
T 2qq8_A 215 LFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGE 259 (334)
T ss_dssp HHHHHHHTTCCGGGTHHHHHHTTTTTTSCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHcCCCccchHHHHHHHHhcccCCHHHHHHHHHHHHHcCC
Confidence 444555667778888888888877777777888888877766543
No 383
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=23.14 E-value=4.1e+02 Score=23.87 Aligned_cols=80 Identities=8% Similarity=-0.010 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhcC---------------ChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC
Q 036589 53 HYDLIITKLGRAK---------------MFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN 117 (176)
Q Consensus 53 ~y~~li~~~~~~g---------------~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 117 (176)
-=+.|+.++++.| ..+...+.|.++.+..... |.......+....+++++..|++++.++.+..
T Consensus 1236 ~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~-d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k 1314 (1354)
T 3lxu_X 1236 QKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDAN-DSKAIQFALWHAYAHGHYGRMYKYVVKLIEEK 1314 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTT-STTTHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccC-CceeehhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3567888888743 2455667888888773222 22222223334447899999999999998653
Q ss_pred CCccHhHHHHHHHHHHhc
Q 036589 118 VQRTVKSLNTLLNALLTC 135 (176)
Q Consensus 118 ~~p~~~~~~~ll~~~~~~ 135 (176)
|+...|..++..+...
T Consensus 1315 --~~~~~~~~~~~~~~~l 1330 (1354)
T 3lxu_X 1315 --RTRDHFVELAAINGAL 1330 (1354)
T ss_dssp --CCHHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHHc
Confidence 6777776666555433
No 384
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=23.07 E-value=57 Score=22.99 Aligned_cols=84 Identities=10% Similarity=0.138 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHhhcC------CCCCchHHHHHHHHHHHhccC---------HHHHHHHHHhcccCCCCc-cHhHHHHHHH
Q 036589 67 FDEMQQILHQLKHDT------RVIPEEIIFCNVISFYGRARL---------LEHALQVFDEMPSFNVQR-TVKSLNTLLN 130 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~------g~~~~~~~~~~li~~~~~~g~---------~~~a~~~~~~m~~~~~~p-~~~~~~~ll~ 130 (176)
.+.|..++.+|--.. +-.-...-|..+.++|.+.|= .+.-.++++..++.|++- -+..|+++|+
T Consensus 170 vetAiaml~dmG~~SvKffPM~Gl~~leEl~avAkAca~~g~~lEPTGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIID 249 (275)
T 3m6y_A 170 IKTAIALVRDMGGNSLKYFPMKGLAHEEEYRAVAKACAEEGFALEPTGGIDKENFETIVRIALEANVEQVIPHVYSSIID 249 (275)
T ss_dssp HHHHHHHHHHHTCCEEEECCCTTTTTHHHHHHHHHHHHHHTCEEEEBSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBC
T ss_pred HHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCCCccHhHHHHHHHHHHHcCCCeecccccceecc
Confidence 577888888887650 111345677889999988773 455566777777777643 4566788887
Q ss_pred HHHhcCcHHHHHHHHHHHHh
Q 036589 131 ALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~ 150 (176)
--...=+.+++.++|..+++
T Consensus 250 k~TG~TrpedV~~ll~~~K~ 269 (275)
T 3m6y_A 250 KETGNTKVEAVRELLAVVKK 269 (275)
T ss_dssp TTTCCBCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 76667778999999888765
No 385
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=22.67 E-value=1.6e+02 Score=19.03 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=22.3
Q ss_pred cCHHHHHHHHHhcccCCCCc--cHhHHHHHHH-H-----HHhcCcHHHHHHHHHHHH
Q 036589 101 RLLEHALQVFDEMPSFNVQR--TVKSLNTLLN-A-----LLTCGKLDRMKELFISFN 149 (176)
Q Consensus 101 g~~~~a~~~~~~m~~~~~~p--~~~~~~~ll~-~-----~~~~g~~~~a~~l~~~m~ 149 (176)
|++=+|-++|+..-...-.+ ....|-.||. . ..+.|+...|..++.+..
T Consensus 46 g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 46 GEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp TCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 55555555555544322223 2333444444 1 123456666666655543
No 386
>3hfh_A Transcription elongation regulator 1; helix bundle, activator, alternative splicing, coiled coil, nucleus, phosphoprotein, repressor; HET: MLY; 2.70A {Homo sapiens} PDB: 2kis_A 2e71_A 2kiq_A
Probab=22.56 E-value=64 Score=21.36 Aligned_cols=27 Identities=4% Similarity=-0.036 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHH
Q 036589 68 DEMQQILHQLKHDTRVIPEEIIFCNVIS 95 (176)
Q Consensus 68 ~~a~~~~~~m~~~~g~~~~~~~~~~li~ 95 (176)
+++...|.+|....++.|+. +|...+.
T Consensus 5 ee~~~~F~~lL~~~~V~~~~-~We~~~~ 31 (190)
T 3hfh_A 5 SARMXQFXDMLLERGVSAFS-TWEXELH 31 (190)
T ss_dssp CHHHHHHHHHHHHTTCCSSS-CHHHHGG
T ss_pred HHHHHHHHHHHHHcCcCCCC-chhhhhh
Confidence 46777788888776666643 4444443
No 387
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.55 E-value=1e+02 Score=16.68 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=23.1
Q ss_pred HHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 036589 103 LEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 103 ~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~ 150 (176)
++++++.+.+|- |+.....+---.-...|+++.|.+-+-.|..
T Consensus 18 ~~~~v~~L~~MF-----P~lD~~vI~~vL~a~~G~vd~aId~LL~ms~ 60 (67)
T 2dhy_A 18 FNQAMDDFKTMF-----PNMDYDIIECVLRANSGAVDATIDQLLQMNL 60 (67)
T ss_dssp SHHHHHHHHHHC-----SSSCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC-----CCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Confidence 455555566664 4444333222223455677777777666654
No 388
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=22.54 E-value=3e+02 Score=22.08 Aligned_cols=95 Identities=11% Similarity=-0.019 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHH
Q 036589 52 LHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNA 131 (176)
Q Consensus 52 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 131 (176)
..+..+.......+...++...+...... ..+.....-.+....+.|+++.|...|+.|......-+...|..-- +
T Consensus 253 ~~~~~ia~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~r-a 328 (618)
T 1qsa_A 253 ELRDIVAWRLMGNDVTDEQAKWRDDAIMR---SQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQAD-L 328 (618)
T ss_dssp HHHHHHHHTSCSTTCCHHHHHHHHHHHHT---CCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHhcccc---CCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHH-H
Q ss_pred HHhcCcHHHHHHHHHHHHh
Q 036589 132 LLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 132 ~~~~g~~~~a~~l~~~m~~ 150 (176)
+...|+.++|..+|..+.+
T Consensus 329 ~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 329 LLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHTTCHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHhc
No 389
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=21.74 E-value=95 Score=22.39 Aligned_cols=47 Identities=9% Similarity=0.150 Sum_probs=36.9
Q ss_pred HHHHhcccCCCCccHhHHHHHHHHHHhcCcHHHHHHHHHHHHhcccc
Q 036589 108 QVFDEMPSFNVQRTVKSLNTLLNALLTCGKLDRMKELFISFNLKAIA 154 (176)
Q Consensus 108 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~a~~l~~~m~~~~~~ 154 (176)
++++.+.+.|+.|...++.-++..|.+.=.++.+.++++-+...|..
T Consensus 209 ~L~~hL~~~~i~~~~~~~~W~l~lF~~~lp~~~~lrlwD~~l~~g~~ 255 (331)
T 3qye_A 209 DLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQGTE 255 (331)
T ss_dssp HHHHHHHHTTCCGGGTSHHHHHSTTTTTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHCCcH
Confidence 45556667788888888888888888887788888888888766543
No 390
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=21.72 E-value=1.9e+02 Score=19.56 Aligned_cols=61 Identities=11% Similarity=0.066 Sum_probs=46.7
Q ss_pred HHHHHHHh---cCChHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccC-----HHHHHHHHHhcccCCC
Q 036589 56 LIITKLGR---AKMFDEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARL-----LEHALQVFDEMPSFNV 118 (176)
Q Consensus 56 ~li~~~~~---~g~~~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~-----~~~a~~~~~~m~~~~~ 118 (176)
.+|+++.| ..+.+.|.-.+-+|.+. | .|.-+.--.++.+.-..|. +..|...++.....|.
T Consensus 16 d~iSAf~KSiRGSDpDAAly~LaRml~~-G-Dp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~iG~ 84 (204)
T 2r9g_A 16 DVISAFQKSIRGSDVDAALHYLARLVEA-G-DLASICRRLMVIGYEDIGLGNPAAAARTVNAVLAAEKLGL 84 (204)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhCC
Confidence 36777764 57899999999999999 8 8888888888888888876 4556666666655554
No 391
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=21.63 E-value=2.5e+02 Score=20.92 Aligned_cols=66 Identities=14% Similarity=0.045 Sum_probs=44.2
Q ss_pred CchHHHHHHHHHHHhccC--HHHHHHHHHhcccCCCCccHhHHHHHHHH-HHhcCcHHHHHHHHHHHHhcc
Q 036589 85 PEEIIFCNVISFYGRARL--LEHALQVFDEMPSFNVQRTVKSLNTLLNA-LLTCGKLDRMKELFISFNLKA 152 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~~~~p~~~~~~~ll~~-~~~~g~~~~a~~l~~~m~~~~ 152 (176)
++..+|..+|+......+ .+++..+++.+.+-. . +......++-+ ..|.-..++...+.+.|++.+
T Consensus 21 ~~~~t~~~il~~l~~g~~Ls~eEa~~~~~~i~~G~-~-~~~QiaAfL~Alr~kGet~eEi~g~~~am~~~~ 89 (377)
T 3r88_A 21 ASVPSWPQILGRLTDNRDLARGQAAWAMDQIMTGN-A-RPAQIAAFAVAMTMKAPTADEVGELAGVMLSHA 89 (377)
T ss_dssp ---CCHHHHHHHHHTTCCCCTTHHHHHHHHHHTTC-S-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC-C-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhC
Confidence 344578889988877776 578999999998543 3 34444455544 455556788888888887654
No 392
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=21.35 E-value=1.4e+02 Score=17.78 Aligned_cols=15 Identities=13% Similarity=0.353 Sum_probs=7.1
Q ss_pred HhcCcHHHHHHHHHH
Q 036589 133 LTCGKLDRMKELFIS 147 (176)
Q Consensus 133 ~~~g~~~~a~~l~~~ 147 (176)
++.|++++|.+++++
T Consensus 31 Ak~g~fe~A~~~l~e 45 (105)
T 2e2a_A 31 AENGDFAKADSLVVE 45 (105)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHH
Confidence 344455554444444
No 393
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=21.17 E-value=2.5e+02 Score=20.64 Aligned_cols=18 Identities=17% Similarity=0.052 Sum_probs=8.6
Q ss_pred HHHHHHHhccChhHHHHh
Q 036589 11 RLASLLHLQKHPKLALQL 28 (176)
Q Consensus 11 ~l~~~~~~~~~~~~A~~~ 28 (176)
.+..=|.+.+++++|+++
T Consensus 40 Ti~~Ry~~~k~y~eAidL 57 (336)
T 3lpz_A 40 LVAARYSKQGNWAAAVDI 57 (336)
T ss_dssp HHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhhcCHHHHHHH
Confidence 344444455555555443
No 394
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=20.89 E-value=2e+02 Score=19.29 Aligned_cols=81 Identities=6% Similarity=-0.015 Sum_probs=44.6
Q ss_pred CchHHHHHHHHHHHhccCHHHHHHHH-----------HhcccCCCCccHhHHHHHHHHHHhcCc---HHHHHHHHHHHHh
Q 036589 85 PEEIIFCNVISFYGRARLLEHALQVF-----------DEMPSFNVQRTVKSLNTLLNALLTCGK---LDRMKELFISFNL 150 (176)
Q Consensus 85 ~~~~~~~~li~~~~~~g~~~~a~~~~-----------~~m~~~~~~p~~~~~~~ll~~~~~~g~---~~~a~~l~~~m~~ 150 (176)
|....|+..+...+..|++.+++..+ +.+.+.. .|+ ..|...|..|..... .+...++++++.+
T Consensus 100 p~t~aY~~~l~~~a~~~~~~~~laAl~pc~~~Y~~i~~~l~~~~-~~~-~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~ 177 (220)
T 1rtw_A 100 WRAKSYVNYLLSVASLGSFLEGFTALYCEEKAYYEAWKWVRENL-KER-SPYQEFINHWSSQEFGEYVKRIEKILNSLAE 177 (220)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHC-SSC-CTTHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhcc-CCC-chHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 56777888887778888876654322 2222221 244 467788888877532 3344444444432
Q ss_pred ccccccchHHHHHHHHHhhcc
Q 036589 151 KAIAVLDGLCSNLKIIMNDSQ 171 (176)
Q Consensus 151 ~~~~~p~~~t~~~li~~~~~~ 171 (176)
. ++......+...+.+.
T Consensus 178 ~----~~~~~~~~~~~~f~~a 194 (220)
T 1rtw_A 178 K----HGEFEKERAREVFKEV 194 (220)
T ss_dssp T----SCHHHHHHHHHHHHHH
T ss_pred h----CCHHHHHHHHHHHHHH
Confidence 2 3444445555555443
No 395
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=20.74 E-value=4e+02 Score=22.80 Aligned_cols=142 Identities=14% Similarity=0.067 Sum_probs=76.4
Q ss_pred HHHHHHHhccC---hhHHHHhhcCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCCCch
Q 036589 11 RLASLLHLQKH---PKLALQLFKNPNPNANDTEAPPLKPFRYNLLHYDLIITKLGRAKMFDEMQQILHQLKHDTRVIPEE 87 (176)
Q Consensus 11 ~l~~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~~g~~~~~ 87 (176)
.++...|+.|+ .++|.+.|+....... ...++|+.... +.+.+ .+.-++-..+++..+.. .+.
T Consensus 753 ~il~~ac~~g~~~c~~~A~~~f~~~~~~~~------~~~i~~~lr~~---Vyc~~-~~~~~~~~~l~~~y~~s----~~~ 818 (967)
T 3se6_A 753 ALLKLACDLNHAPCIQKAAELFSQWMESSG------KLNIPTDVLKI---VYSVG-AQTTAGWNYLLEQYELS----MSS 818 (967)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTT------CSCCCHHHHHH---HHHHH-TTSHHHHHHHHHHHHHC----SCH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhcCCC------cccCChhhhhH---hHhhh-hccHHHHHHHHHHHhcc----CCH
Confidence 45666677776 5578888888623221 01356665542 22222 23333334455555544 234
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHhcccCCCCccHhHHHHHHHHHHhcC-cHHHHHHHHHH----HHhccccccchHHHH
Q 036589 88 IIFCNVISFYGRARLLEHALQVFDEMPSFNVQRTVKSLNTLLNALLTCG-KLDRMKELFIS----FNLKAIAVLDGLCSN 162 (176)
Q Consensus 88 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g-~~~~a~~l~~~----m~~~~~~~p~~~t~~ 162 (176)
.--..++.+++...+.....++++........+..... .++.+.+.+. ..+.|.+.+.+ +.+ ... ++...+.
T Consensus 819 ~ek~~ll~aL~ct~d~~ll~~~L~~~l~~~~i~~qd~~-~~~~~v~~n~~g~~~~w~f~~~nw~~i~~-~~~-~~~~~~~ 895 (967)
T 3se6_A 819 AEQNKILYALSTSKHQEKLLKLIELGMEGKVIKTQNLA-ALLHAIARRPKGQQLAWDFVRENWTHLLK-KFD-LGSYDIR 895 (967)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCSSSCGGGHH-HHHHHHHHSTTHHHHHHHHHHHHHHHHHH-HSC-TTSHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCcCcCcHhHHH-HHHHHHHcChhHHHHHHHHHHHHHHHHHH-HhC-CCchHHH
Confidence 44578899999999988888888877654322333333 3444555443 24445555543 222 222 3445666
Q ss_pred HHHHHhh
Q 036589 163 LKIIMND 169 (176)
Q Consensus 163 ~li~~~~ 169 (176)
.+|.+..
T Consensus 896 ~~i~~~~ 902 (967)
T 3se6_A 896 MIISGTT 902 (967)
T ss_dssp HHHHTTT
T ss_pred HHHHHHH
Confidence 6666544
No 396
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=20.66 E-value=83 Score=22.85 Aligned_cols=44 Identities=14% Similarity=0.339 Sum_probs=34.6
Q ss_pred HHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC
Q 036589 73 ILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN 117 (176)
Q Consensus 73 ~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 117 (176)
+++.+.+. |+.|...++.-++..+.+.=.++.+..+++.+...|
T Consensus 215 L~~hL~~~-~i~~~~~~~~W~ltlF~~~lp~~~~lriWD~~l~eg 258 (334)
T 2qq8_A 215 LFAHFKKN-NLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDG 258 (334)
T ss_dssp HHHHHHHT-TCCGGGTHHHHHHTTTTTTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHc-CCCccchHHHHHHHHhcccCCHHHHHHHHHHHHHcC
Confidence 44555555 888888888888888887778899999999888666
No 397
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.54 E-value=54 Score=22.80 Aligned_cols=84 Identities=8% Similarity=0.088 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHhhcC------CCCCchHHHHHHHHHHHhccC---------HHHHHHHHHhcccCCCC-ccHhHHHHHHH
Q 036589 67 FDEMQQILHQLKHDT------RVIPEEIIFCNVISFYGRARL---------LEHALQVFDEMPSFNVQ-RTVKSLNTLLN 130 (176)
Q Consensus 67 ~~~a~~~~~~m~~~~------g~~~~~~~~~~li~~~~~~g~---------~~~a~~~~~~m~~~~~~-p~~~~~~~ll~ 130 (176)
.+.|..++.+|--.. +-.-...-|..+..+|.+.|= .+.-.++++..++.|++ .-++.|+++|+
T Consensus 147 vetAiaml~dmG~~SvKffPm~Gl~~l~E~~avAka~a~~g~~lEPTGGIdl~N~~~I~~i~l~aGv~~viPHIYssIID 226 (249)
T 3m0z_A 147 LETAIALLKDMGGSSIKYFPMGGLKHRAEFEAVAKACAAHDFWLEPTGGIDLENYSEILKIALDAGVSKIIPHIYSSIID 226 (249)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTTTHHHHHHHHHHHHHTTCEEEEBSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBC
T ss_pred HHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCCCccHhhHHHHHHHHHHcCCCeecccccceecc
Confidence 577888888887550 111345667888899988773 35556666666666653 24466788887
Q ss_pred HHHhcCcHHHHHHHHHHHHh
Q 036589 131 ALLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 131 ~~~~~g~~~~a~~l~~~m~~ 150 (176)
--...=+.+++.++|..+++
T Consensus 227 k~TG~TrpedV~~ll~~~K~ 246 (249)
T 3m0z_A 227 KASGNTRPADVRQLLEMTKQ 246 (249)
T ss_dssp TTTCCBCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 76677788999999988765
No 398
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=20.33 E-value=2e+02 Score=19.12 Aligned_cols=84 Identities=12% Similarity=0.009 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHHHHhcCCh-HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHhccCHHHHHHHHHhcccCC-CCccHhHHH
Q 036589 49 YNLLHYDLIITKLGRAKMF-DEMQQILHQLKHDTRVIPEEIIFCNVISFYGRARLLEHALQVFDEMPSFN-VQRTVKSLN 126 (176)
Q Consensus 49 ~~~~~y~~li~~~~~~g~~-~~a~~~~~~m~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~-~~p~~~~~~ 126 (176)
.+..-+..++..+...+.. ..+.++|+.+-....-..+..-|..++..+.+...-++...+|+.+-..| -..+..-+.
T Consensus 82 Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~ 161 (229)
T 3dd4_A 82 VNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEML 161 (229)
T ss_dssp CCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHH
T ss_pred cCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHH
Confidence 3455555555554333332 33445666655442334455555555555544444455555666554222 123433444
Q ss_pred HHHHHH
Q 036589 127 TLLNAL 132 (176)
Q Consensus 127 ~ll~~~ 132 (176)
.++..+
T Consensus 162 ~~l~~~ 167 (229)
T 3dd4_A 162 DIMKAI 167 (229)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 399
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=20.24 E-value=97 Score=18.41 Aligned_cols=19 Identities=11% Similarity=0.120 Sum_probs=14.2
Q ss_pred HHhcCcHHHHHHHHHHHHh
Q 036589 132 LLTCGKLDRMKELFISFNL 150 (176)
Q Consensus 132 ~~~~g~~~~a~~l~~~m~~ 150 (176)
.++.|++++|.+++++-.+
T Consensus 28 ~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 28 QAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 4678888888888877543
Done!