BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036592
(519 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
GN=At1g04910 PE=1 SV=1
Length = 519
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 242/444 (54%), Gaps = 32/444 (7%)
Query: 75 EMWGPRLLKGWPSCFSHNSDLSLAAQFSPLPAKIVLPPKRVYKNNGYLMVSCNGGLNQMR 134
E+W GW + SD P P K + NGYL V CNGGLNQ R
Sbjct: 61 ELWESAKSGGWRPSSAPRSDW-------PPPTK---------ETNGYLRVRCNGGLNQQR 104
Query: 135 AAICDMVAIARYLNVTLIVPELDKTSFWNDPSEFKDIFDVDHFIASLRDEVRILKELPPR 194
+AIC+ V AR +N TL++PELD SFW+D S F+ I+DV+HFI +L+ +V+I+ ++P
Sbjct: 105 SAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDV 164
Query: 195 LKT-RVELGMLYSLPPISWSDISYYHNQILPLLQKHKVVHLNKTDARLANNGLPLEFQKL 253
K + + + + P + I +Y L +++H ++L RLA E+Q+L
Sbjct: 165 HKNGKTKKIKAFQIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRL 224
Query: 254 RCRVNFKALKFTSQIEELGRRVVKILREKGPFLVLHLRYEMDMLAFSGCTHGCNIEEVEE 313
RCRVN+ AL+F I +L +V LR +G F+ +HLR+EMDMLAF+GC N EE +
Sbjct: 225 RCRVNYHALRFKPHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKI 284
Query: 314 LTQMRYAYPWWKEKVINSEMKRKEGLCPLTPEETALVLTALGIDHNVQIYIAAGEIYGGQ 373
L + R + +++I +E +R G CPLTPEE L+L A+ D++ +IY+AAGE++GG+
Sbjct: 285 LRKYRKEN-FADKRLIYNE-RRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGE 342
Query: 374 RRMAALAEAFPNLVRKETLLKSDLKFFQNHSSQMAALDYLVSLESDIFIPTYDG--NMAK 431
+ M FP L ++ S+ + +A+DY+V L SDIF+PTYDG N A
Sbjct: 343 QFMKPFRTLFPRLDNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFAN 402
Query: 432 VVEGHRRFLGFKKTILLNRRQLVDLIDQYNNGSMSWDEFASTVKEVHVDL-MGNPKARVV 490
+ GHR + GF+ TI +R+ L + G + F V+ V + G P RV
Sbjct: 403 NLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRAG--FEEAVRRVMLKTNFGGPHKRV- 459
Query: 491 IPDKPKEEDYFYANP-HECLQQLD 513
+ FY N EC Q++
Sbjct: 460 ------SPESFYTNSWPECFCQMN 477
>sp|Q2GFL5|SYA_EHRCR Alanine--tRNA ligase OS=Ehrlichia chaffeensis (strain Arkansas)
GN=alaS PE=3 SV=1
Length = 887
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 264 FTSQIEELGRRVVKILREKGPFLVLHLRYEMDMLAF---SGCTHGCNIEEVEELTQMRYA 320
FT + EE G RVV I K H++Y ++ F S + C I +E +T RYA
Sbjct: 662 FTEKYEEHGVRVVSIKDSKELCCGTHVKYTSEIGCFKIVSEASIACGIRRIEAVTG-RYA 720
Query: 321 YPWWK--EKVINS 331
+++ EK++NS
Sbjct: 721 IDYFRQQEKMLNS 733
>sp|Q48HD9|PSTB1_PSE14 Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=pstB1 PE=3
SV=1
Length = 259
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 342 LTPEETALVLTALGIDHNVQIYIAAGEIYGGQRRMAALAEAFPNLVRKETLLKSDLKFFQ 401
L E+T + + L +N Q + + ++ ++R+ A+ P+ K TLL+ + +
Sbjct: 6 LANEKTKIQVRGLEFFYNNQKSLKSIDMTIPEKRITAIIG--PSGCGKSTLLRVFNRIYA 63
Query: 402 NHSSQMAALDYLVSLESDIFIPTYDGNMAKVVEG--HRRFLGFKKTIL------------ 447
+ Q A + L++ E +I P Y N + G ++ + F +I
Sbjct: 64 MYPKQEARGEVLLNGE-NILAPGYSMNRLRSHVGMVFQKPVPFPMSIFDNISYAIKHHEK 122
Query: 448 LNRRQLVDLIDQYNNGSMSWDEFASTVKEVHVDLMGNPKARVVI 491
L+RR++ D ++Q G+ WDE +K+ L G + R+ I
Sbjct: 123 LSRREMEDRVEQALRGAALWDEVKDKLKQSATGLSGGQQQRLCI 166
>sp|B0G170|PKS28_DICDI Probable polyketide synthase 28 OS=Dictyostelium discoideum GN=pks28
PE=3 SV=1
Length = 2690
Score = 33.9 bits (76), Expect = 2.9, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 107 KIVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELD--------- 157
KI+LP NG L++ ++ +C V++A N + P +
Sbjct: 1259 KIILP-------NGRLLM-------EISRVVCSSVSLANPSNTIICKPPSNEIYTPYLQP 1304
Query: 158 KTSFWNDPSEFKDIFDVDHFIASLRDEVRILKEL 191
K S N P +FK ++ VD FIA D I EL
Sbjct: 1305 KDSIINKPQQFKHLYSVDEFIAKEEDNQIISTEL 1338
>sp|Q4ZRT7|PSTB1_PSEU2 Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=pstB1 PE=3 SV=1
Length = 259
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 342 LTPEETALVLTALGIDHNVQIYIAAGEIYGGQRRMAALAEAFPNLVRKETLLKSDLKFFQ 401
L E+T + + L +N Q + + ++ ++R+ A+ P+ K TLL+ + +
Sbjct: 6 LANEKTKIQVRGLEFFYNNQKSLKSIDMTIPEKRITAIIG--PSGCGKSTLLRVFNRIYA 63
Query: 402 NHSSQMAALDYLVSLESDIFIPTYDGNMAKVVEG--HRRFLGFKKTIL------------ 447
+ Q A + L++ E +I P Y N + G ++ + F +I
Sbjct: 64 MYPKQEARGEVLLNGE-NILAPGYSMNRLRSHVGMVFQKPVPFPMSIYDNISYAIKHHEK 122
Query: 448 LNRRQLVDLIDQYNNGSMSWDEFASTVKEVHVDLMGNPKARVVI 491
L+RR++ D ++Q G+ WDE +K+ L G + R+ I
Sbjct: 123 LSRREMEDRVEQALRGAALWDEVKDKLKQSATGLSGGQQQRLCI 166
>sp|Q880A6|PSTB1_PSESM Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=pstB1 PE=3 SV=1
Length = 259
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 342 LTPEETALVLTALGIDHNVQIYIAAGEIYGGQRRMAALAEAFPNLVRKETLLKSDLKFFQ 401
L E+T + + L +N Q + + ++ ++R+ A+ P+ K TLL+ + +
Sbjct: 6 LANEKTKIQVRGLEFFYNNQKSLKSIDMTIPEKRITAIIG--PSGCGKSTLLRVFNRIYA 63
Query: 402 NHSSQMAALDYLVSLESDIFIPTYDGNMAKVVEG--HRRFLGFKKTIL------------ 447
+ Q A + L++ E +I P Y N + G ++ + F +I
Sbjct: 64 MYPKQEARGEVLLNGE-NILAPGYSMNRLRSHVGMVFQKPVPFPMSIYDNISYAIKHHEK 122
Query: 448 LNRRQLVDLIDQYNNGSMSWDEFASTVKEVHVDLMGNPKARVVI 491
L+RR++ D ++Q G+ WDE +K+ L G + R+ I
Sbjct: 123 LSRREMEDRVEQALRGAALWDEVKDKLKQSATGLSGGQQQRLCI 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,934,556
Number of Sequences: 539616
Number of extensions: 7850119
Number of successful extensions: 18708
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 18701
Number of HSP's gapped (non-prelim): 12
length of query: 519
length of database: 191,569,459
effective HSP length: 122
effective length of query: 397
effective length of database: 125,736,307
effective search space: 49917313879
effective search space used: 49917313879
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)