BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036595
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKVEI--- 57
M C CER V R++ KGV T + H+V V G +DP KV+ ++ +TGKKVE+
Sbjct: 34 MDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPY 93
Query: 58 VDNNNNNEESPKGCRNNEENEDSYRALLDKTNEDLAILFDC-CKYNDEVLMMFSDENPNA 116
V + G + + R + D LA +Y FSDENP A
Sbjct: 94 VPYDVVAHPYAAGVYDKKAPSGYVRRVDDPGVSQLARASSTEVRYTTA----FSDENPAA 149
Query: 117 CSIM 120
C +M
Sbjct: 150 CVVM 153
>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CCS1 PE=3 SV=1
Length = 238
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGK 53
M+C C ++RA+ GV++ T D+ + V V G P +++ L TG+
Sbjct: 16 MHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQAL-AATGR 67
>sp|P94186|MERP_ALCSP Mercuric transport protein periplasmic component OS=Alcaligenes
sp. GN=merP PE=3 SV=1
Length = 91
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTG 52
M C+ C TV +AISK +GV K VVT D + ++KL K TG
Sbjct: 31 MTCSTCPITVKKAISKVEGVSKIDVTFETREAVVTFD-DAKTSVQKLTKATG 81
>sp|P13113|MERP_SERMA Mercuric transport protein periplasmic component OS=Serratia
marcescens GN=merP PE=1 SV=1
Length = 91
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKT 51
M C+AC TV +AISK +GV K VVT D + ++KL K T
Sbjct: 31 MTCSACPITVKKAISKVEGVSKVNVTFETREAVVTFD-DAKTSVQKLTKAT 80
>sp|P04129|MERP_SHIFL Mercuric transport protein periplasmic component OS=Shigella
flexneri GN=merP PE=1 SV=1
Length = 91
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTG 52
M C AC TV +A+SK +GV K K VVT D + ++KL K T
Sbjct: 31 MTCAACPITVKKALSKVEGVSKVDVGFEKREAVVTFD-DTKASVQKLTKATA 81
>sp|Q51770|MERP_PSEFL Mercuric transport protein periplasmic component OS=Pseudomonas
fluorescens GN=merP PE=3 SV=1
Length = 91
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKT 51
M C+AC TV +AISK GV K VVT D + ++KL K T
Sbjct: 31 MTCSACPITVKKAISKVDGVSKVDVTFETREAVVTFD-DAKTSVQKLTKAT 80
>sp|P04131|MERP_PSEAI Mercuric transport protein periplasmic component OS=Pseudomonas
aeruginosa GN=merP PE=4 SV=1
Length = 91
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTG 52
M C+AC TV +AIS+ +GV K + VVT D + ++KL K T
Sbjct: 31 MTCSACPITVKKAISEVEGVSKVDVTFETRQAVVTFD-DAKTSVQKLTKATA 81
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVV-TGRIDPQKVLKKLKKKTGKKVEIV 58
M C C + V +SK GV D+ +V + ++ ++LK + +KTGKK I+
Sbjct: 9 MTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCESSKMGADELLKNI-QKTGKKCSII 66
>sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=copA PE=3
SV=1
Length = 915
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRI-DPQKVLKKLKKKTGKKVEIVD 59
M C +C +V +A+ +GV+ ++ + +V G +PQ +L + + +G + EI+D
Sbjct: 181 MTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRGIFANPQPLLNAI-QSSGYQAEILD 239
Query: 60 N 60
+
Sbjct: 240 D 240
>sp|P0A216|MERP_SALTI Mercuric transport protein periplasmic component OS=Salmonella
typhi GN=merP PE=3 SV=1
Length = 91
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT 35
M C +C TV A+SK +GV K +K + VVT
Sbjct: 31 MTCASCPITVKHALSKVEGVSKTDVSFDKRQAVVT 65
>sp|P0A218|MERP_ENTCL Mercuric transport protein periplasmic component OS=Enterobacter
cloacae GN=merP PE=3 SV=1
Length = 91
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT 35
M C +C TV A+SK +GV K +K + VVT
Sbjct: 31 MTCASCPITVKHALSKVEGVSKTDVSFDKRQAVVT 65
>sp|P0A217|MERP_ENTAG Mercuric transport protein periplasmic component OS=Enterobacter
agglomerans GN=merP PE=3 SV=1
Length = 91
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT 35
M C +C TV A+SK +GV K +K + VVT
Sbjct: 31 MTCASCPITVKHALSKVEGVSKTDVSFDKRQAVVT 65
>sp|Q52107|MERP_ACICA Mercuric transport protein periplasmic component OS=Acinetobacter
calcoaceticus GN=merP PE=3 SV=1
Length = 91
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT 35
M C +C TV A+SK +GV K +K + VVT
Sbjct: 31 MTCASCPITVKHALSKVEGVSKTDVSFDKRQAVVT 65
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKVEIV 58
M C C V+R ++K GVE F D+ +V + +L L KTGK V +
Sbjct: 10 MTCEGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIDSEHSSDTLLATL-NKTGKAVSYL 65
>sp|Q7A3E6|COPA_STAAN Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
N315) GN=copA PE=1 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q99R80|COPA_STAAM Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|A5IVY3|COPA_STAA9 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
JH9) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|A6U4T8|COPA_STAA2 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
JH1) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|A7X6S1|COPA_STAA1 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKV 55
M C C V+R ++K GVE F D+ +V + +L L KTGK V
Sbjct: 10 MTCGGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIESEHSSDILLATL-NKTGKAV 62
>sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MW2) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q6G6B7|COPA_STAAS Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MSSA476) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Newman) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
COL) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
NCTC 8325) GN=copA PE=1 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q2FDV0|COPA_STAA3 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300) GN=copA PE=3 SV=1
Length = 802
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNKD 145
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKV 55
M C C V+R ++K GVE F D+ +V + +L+ L +KTGK V
Sbjct: 10 MTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETL-EKTGKAV 62
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MRSA252) GN=copA PE=3 SV=1
Length = 802
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVT---GRIDPQKVLKKLKKKTGKKVEI 57
M C AC + + ++K GV+ T ++ + V D K++ ++ +K G I
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRI-QKLGYDASI 139
Query: 58 VDNNNN 63
DNN +
Sbjct: 140 KDNNRD 145
>sp|E4TJ18|SECD_CALNY Protein translocase subunit SecD OS=Calditerrivibrio nitroreducens
(strain DSM 19672 / NBRC 101217 / Yu37-1) GN=secD PE=3
SV=1
Length = 517
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 32 VVVTGRIDPQKVLKKLKKKTGKKVEIVDNNNNNEESPK 69
V + G DP++ +K + K K ++D N NNEE+ K
Sbjct: 167 VQLAGITDPERAVKLIGKTAQLKFYLLDENANNEETIK 204
>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1
Length = 68
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 1 MYCNACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKV 55
M C C V+R ++K GV K+ D+ +V + +L L KKTGK V
Sbjct: 10 MTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATL-KKTGKTV 62
>sp|P21623|DIT1_YEAST Spore wall maturation protein DIT1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DIT1 PE=1 SV=2
Length = 536
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 34 VTGRIDPQKVLKKLKKKTGKKVEIVDNNNNNEESPKGCRNNEENEDSY 81
V+ RI P + K G ++I + ++E +GC ENE+S+
Sbjct: 96 VSERILPASLANKFTNNLGVAIKISEYTRDDERQIRGCVTTVENENSF 143
>sp|P21538|REB1_YEAST DNA-binding protein REB1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=REB1 PE=1 SV=2
Length = 810
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 4 NACERTVARAISKFKGVEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKVEIVDNN-- 61
NA + +V A+ K+ GV D H DPQ K L+ K KK IV+++
Sbjct: 9 NANQESVEEAVLKYVGV---GLDHQNH--------DPQLHTKDLENKHSKKQNIVESSSD 57
Query: 62 ---NNNEESPKGCRNNEENE 78
NNN++S + NN+++E
Sbjct: 58 VDVNNNDDSNRNEDNNDDSE 77
>sp|A6QCC6|RIMO_SULNB Ribosomal protein S12 methylthiotransferase RimO OS=Sulfurovum sp.
(strain NBC37-1) GN=rimO PE=3 SV=1
Length = 439
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 20 VEKFTTDMNKHRVVVTGRIDPQKVLKKLKKKTGKKVEIVDNNNNNE 65
+E+ D+ R + G I + L+ L+K GK VE+V + ++E
Sbjct: 338 MEQIPQDIINERAEILGEIAERSTLRSLEKMVGKTVELVIDGESDE 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,548,729
Number of Sequences: 539616
Number of extensions: 1929933
Number of successful extensions: 29756
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 26562
Number of HSP's gapped (non-prelim): 3034
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)