Query 036597
Match_columns 139
No_of_seqs 117 out of 642
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 05:21:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036597.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036597hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 46.9 3 0.00022 23.1 0.8 18 57-74 1-18 (36)
2 d1z3xa2 a.261.1.1 (A:88-235) G 45.4 0.59 4.3E-05 33.5 -3.0 28 35-63 119-146 (148)
3 d1y6ia2 a.261.1.1 (A:83-233) M 44.7 0.86 6.2E-05 32.7 -2.2 30 34-65 118-148 (151)
4 d2bkfa1 d.15.2.2 (A:1-85) Next 44.2 14 0.00099 23.8 4.0 48 44-93 11-67 (85)
5 d1tjya_ c.93.1.1 (A:) AI-2 rec 34.5 17 0.0013 25.0 3.6 32 46-77 1-35 (316)
6 d2r85a1 c.30.1.8 (A:1-99) 5-fo 34.1 0.87 6.3E-05 30.8 -3.5 21 35-55 66-88 (99)
7 d1o51a_ d.58.5.4 (A:) Hypothet 27.7 21 0.0016 22.9 2.9 27 41-73 6-32 (102)
8 d1fc4a_ c.67.1.4 (A:) 2-amino- 27.3 34 0.0024 26.1 4.5 41 38-79 35-80 (401)
9 d2al3a1 d.15.1.2 (A:10-85) Tet 27.0 31 0.0023 21.6 3.5 37 40-78 2-38 (76)
10 d1yu5x1 a.14.1.1 (X:10-76) Vil 26.3 9.8 0.00071 23.5 0.8 19 56-74 31-49 (67)
11 d2pbza1 c.30.1.8 (A:4-99) 5-fo 24.8 1.5 0.00011 29.4 -3.6 21 35-55 61-83 (96)
12 d2c9wc1 d.42.1.1 (C:17-112) El 23.6 32 0.0023 21.4 3.1 53 46-99 8-62 (96)
13 d1qusa_ d.2.1.6 (A:) 36 kDa so 22.5 24 0.0018 27.3 2.8 24 55-78 13-36 (322)
14 d1ujsa_ a.14.1.1 (A:) Actin-bi 20.6 14 0.00098 24.1 0.7 20 56-75 46-65 (88)
15 d1qzpa_ a.14.1.1 (A:) Dematin 20.4 11 0.00079 23.4 0.1 19 56-74 32-50 (68)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.87 E-value=3 Score=23.14 Aligned_cols=18 Identities=28% Similarity=0.628 Sum_probs=16.7
Q ss_pred ccCcHHHHHHHHhhHHhc
Q 036597 57 YLHTNIFRELFEMSEEEF 74 (139)
Q Consensus 57 yL~hP~F~~LL~~aeeEf 74 (139)
||+...|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999998
No 2
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=45.39 E-value=0.59 Score=33.48 Aligned_cols=28 Identities=25% Similarity=0.384 Sum_probs=17.7
Q ss_pred cCCCCceEEEeccceeEEEeecccCcHHH
Q 036597 35 QANKGHFVVYSTDLRRFVIPLAYLHTNIF 63 (139)
Q Consensus 35 ~vpkG~~~VYVge~~RfvVp~~yL~hP~F 63 (139)
.+|+||+|+.. ..+-+-|=-..|+||.|
T Consensus 119 ~AP~GHLP~~~-~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 119 SAPRGHLPLTN-QLRGVQVLNALLNHPAW 146 (148)
T ss_dssp TSCTTCCSCCC-CTTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCcCC-ccchHHHHHHHhcCccc
Confidence 78999999753 33333333456777765
No 3
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=44.71 E-value=0.86 Score=32.71 Aligned_cols=30 Identities=13% Similarity=0.250 Sum_probs=19.9
Q ss_pred ccCCCCceEEEeccc-eeEEEeecccCcHHHHH
Q 036597 34 KQANKGHFVVYSTDL-RRFVIPLAYLHTNIFRE 65 (139)
Q Consensus 34 s~vpkG~~~VYVge~-~RfvVp~~yL~hP~F~~ 65 (139)
..+|+||+|+...-+ -| +--..|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 378999999865321 11 2334889998864
No 4
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.25 E-value=14 Score=23.77 Aligned_cols=48 Identities=10% Similarity=0.338 Sum_probs=34.1
Q ss_pred EeccceeEEEeecccCcHHHHHHHHhhHHhcCCC---------CCCCeeecCcHHHHHH
Q 036597 44 YSTDLRRFVIPLAYLHTNIFRELFEMSEEEFGLP---------TDGPIILPCNAAFLEY 93 (139)
Q Consensus 44 YVge~~RfvVp~~yL~hP~F~~LL~~aeeEfG~~---------~~G~L~IPC~~~~Fe~ 93 (139)
|-||-.||.++.. +++.|.+|..+-+.-||.+ .+.-++|.|++++=|.
T Consensus 11 f~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 11 FKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp ETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred ECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 3357899998532 4677999999999988853 2344788898775443
No 5
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=34.49 E-value=17 Score=25.00 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=23.5
Q ss_pred ccceeEEEeecccCcHHHHHHHHhh---HHhcCCC
Q 036597 46 TDLRRFVIPLAYLHTNIFRELFEMS---EEEFGLP 77 (139)
Q Consensus 46 ge~~RfvVp~~yL~hP~F~~LL~~a---eeEfG~~ 77 (139)
|..+|..+=+..++||.|..+.+-+ .+++||+
T Consensus 1 G~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 1 GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3456666778899999999986655 4578864
No 6
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=34.09 E-value=0.87 Score=30.79 Aligned_cols=21 Identities=24% Similarity=0.434 Sum_probs=16.6
Q ss_pred cCCCCceEEEec-cc-eeEEEee
Q 036597 35 QANKGHFVVYST-DL-RRFVIPL 55 (139)
Q Consensus 35 ~vpkG~~~VYVg-e~-~RfvVp~ 55 (139)
-+|.|-|++|+| |+ +.|-||+
T Consensus 66 ~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 66 VVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp ECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EecCCCEEEEEcHHHHhcCCCCc
Confidence 689999999999 42 4488874
No 7
>d1o51a_ d.58.5.4 (A:) Hypothetical protein TM0021 {Thermotoga maritima [TaxId: 2336]}
Probab=27.71 E-value=21 Score=22.90 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=22.9
Q ss_pred eEEEeccceeEEEeecccCcHHHHHHHHhhHHh
Q 036597 41 FVVYSTDLRRFVIPLAYLHTNIFRELFEMSEEE 73 (139)
Q Consensus 41 ~~VYVge~~RfvVp~~yL~hP~F~~LL~~aeeE 73 (139)
+-+|+++..|+ =+.|+...|++.+.+.
T Consensus 6 LrIy~~e~~~~------~g~pl~~~iv~~ar~~ 32 (102)
T d1o51a_ 6 LKIYLGEKDKH------SGKPLFEYLVKRAYEL 32 (102)
T ss_dssp EEEEEETTCEE------TTEEHHHHHHHHHHHT
T ss_pred EEEEEcchhcC------CceEHHHHHHHHHHHC
Confidence 56899988775 5899999999999875
No 8
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=27.27 E-value=34 Score=26.11 Aligned_cols=41 Identities=10% Similarity=0.044 Sum_probs=29.3
Q ss_pred CCceEEEeccceeEE--EeecccC---cHHHHHHHHhhHHhcCCCCC
Q 036597 38 KGHFVVYSTDLRRFV--IPLAYLH---TNIFRELFEMSEEEFGLPTD 79 (139)
Q Consensus 38 kG~~~VYVge~~Rfv--Vp~~yL~---hP~F~~LL~~aeeEfG~~~~ 79 (139)
+|.- |.+.|.++|+ .--+||+ ||.+++...++-+.||....
T Consensus 35 ~g~~-v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 35 QQAD-ITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp SSSE-EEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCCe-EEecCCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcc
Confidence 4433 4556777875 2346763 99999999999999997543
No 9
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.00 E-value=31 Score=21.57 Aligned_cols=37 Identities=11% Similarity=0.189 Sum_probs=28.8
Q ss_pred ceEEEeccceeEEEeecccCcHHHHHHHHhhHHhcCCCC
Q 036597 40 HFVVYSTDLRRFVIPLAYLHTNIFRELFEMSEEEFGLPT 78 (139)
Q Consensus 40 ~~~VYVge~~RfvVp~~yL~hP~F~~LL~~aeeEfG~~~ 78 (139)
++.|.....+|..|++.= .-...+.|++|=+.|||+.
T Consensus 2 ~V~Vl~~~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~ 38 (76)
T d2al3a1 2 AVSVLAPNGRRHTVKVTP--STVLLQVLEDTCRRQDFNP 38 (76)
T ss_dssp CEEEECTTSCEEEECCCT--TSBHHHHHHHHHHHTTCCG
T ss_pred cEEEECCCCcEEEEEeCC--CcCHHHHHHHHHHHhCCCh
Confidence 466666778999998753 3367889999999999974
No 10
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=26.26 E-value=9.8 Score=23.54 Aligned_cols=19 Identities=26% Similarity=0.518 Sum_probs=18.0
Q ss_pred cccCcHHHHHHHHhhHHhc
Q 036597 56 AYLHTNIFRELFEMSEEEF 74 (139)
Q Consensus 56 ~yL~hP~F~~LL~~aeeEf 74 (139)
.||+.--|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 5999999999999999998
No 11
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=24.83 E-value=1.5 Score=29.42 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=16.1
Q ss_pred cCCCCceEEEec-cc-eeEEEee
Q 036597 35 QANKGHFVVYST-DL-RRFVIPL 55 (139)
Q Consensus 35 ~vpkG~~~VYVg-e~-~RfvVp~ 55 (139)
-+|.|-|++|+| |+ +.+-||+
T Consensus 61 ~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 61 VVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp CCCBTTHHHHSCHHHHHTCCSCC
T ss_pred EEcCCCEEEEecHHHHhhCCCCc
Confidence 689999999999 32 4566664
No 12
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.63 E-value=32 Score=21.44 Aligned_cols=53 Identities=9% Similarity=0.145 Sum_probs=33.5
Q ss_pred ccceeEEEeecccC-cHHHHHHHHhhHHhcCCCCCCCeeec-CcHHHHHHHHHHHc
Q 036597 46 TDLRRFVIPLAYLH-TNIFRELFEMSEEEFGLPTDGPIILP-CNAAFLEYVIYIVQ 99 (139)
Q Consensus 46 ge~~RfvVp~~yL~-hP~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~li~ 99 (139)
.|+.+|.|+.+... .+.++.+|+... .++=..+++|.+| =+...++.|+...+
T Consensus 8 sDg~~f~V~~~~A~~S~tI~~ml~~~~-~~~e~~~~~IpL~nV~s~iL~kViey~~ 62 (96)
T d2c9wc1 8 SDGHEFIVKREHALTSGTIKAMLSGPG-QFAENETNEVNFREIPSHVLSKVCMYFT 62 (96)
T ss_dssp TTCCEEEEEHHHHTTSHHHHHC-------------CEEECTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEeeHHHHHHhHHHHHHHhccC-ccccCCCCeeECCCCCHHHHHHHHHHHH
Confidence 57899999998875 578889986532 1121356788887 36789999997774
No 13
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=22.51 E-value=24 Score=27.33 Aligned_cols=24 Identities=4% Similarity=0.124 Sum_probs=21.9
Q ss_pred ecccCcHHHHHHHHhhHHhcCCCC
Q 036597 55 LAYLHTNIFRELFEMSEEEFGLPT 78 (139)
Q Consensus 55 ~~yL~hP~F~~LL~~aeeEfG~~~ 78 (139)
-+|.+||-|+.++++..+++||+.
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~ 36 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDR 36 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCH
Confidence 469999999999999999999985
No 14
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.59 E-value=14 Score=24.07 Aligned_cols=20 Identities=30% Similarity=0.469 Sum_probs=18.5
Q ss_pred cccCcHHHHHHHHhhHHhcC
Q 036597 56 AYLHTNIFRELFEMSEEEFG 75 (139)
Q Consensus 56 ~yL~hP~F~~LL~~aeeEfG 75 (139)
.||+.--|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 59999999999999999984
No 15
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.37 E-value=11 Score=23.41 Aligned_cols=19 Identities=42% Similarity=0.613 Sum_probs=17.9
Q ss_pred cccCcHHHHHHHHhhHHhc
Q 036597 56 AYLHTNIFRELFEMSEEEF 74 (139)
Q Consensus 56 ~yL~hP~F~~LL~~aeeEf 74 (139)
.||+.--|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
Done!