Query 036598
Match_columns 212
No_of_seqs 108 out of 1252
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 03:38:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036598.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036598hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02992 coniferyl-alcohol glu 100.0 1.6E-37 3.5E-42 279.6 20.6 184 1-197 266-471 (481)
2 PLN02534 UDP-glycosyltransfera 100.0 1.7E-37 3.7E-42 280.2 20.5 196 1-197 286-488 (491)
3 PLN03015 UDP-glucosyl transfer 100.0 1.5E-37 3.3E-42 278.6 19.9 183 1-193 270-466 (470)
4 PLN00164 glucosyltransferase; 100.0 1.9E-37 4E-42 280.1 20.2 189 1-198 275-476 (480)
5 PLN02207 UDP-glycosyltransfera 100.0 1.8E-37 3.8E-42 278.6 20.0 185 1-195 278-465 (468)
6 PLN02410 UDP-glucoronosyl/UDP- 100.0 2E-37 4.4E-42 277.7 19.8 178 1-195 267-450 (451)
7 PLN02555 limonoid glucosyltran 100.0 3.1E-37 6.6E-42 278.0 20.8 185 1-196 280-470 (480)
8 PLN02173 UDP-glucosyl transfer 100.0 3.7E-37 8E-42 275.5 19.9 181 1-194 267-447 (449)
9 PLN02554 UDP-glycosyltransfera 100.0 3.6E-37 7.8E-42 278.5 19.0 187 1-195 277-478 (481)
10 PLN02863 UDP-glucoronosyl/UDP- 100.0 8.2E-37 1.8E-41 275.5 19.8 182 1-196 286-472 (477)
11 PLN03007 UDP-glucosyltransfera 100.0 8.1E-37 1.8E-41 276.4 19.8 188 1-195 288-480 (482)
12 PLN02210 UDP-glucosyl transfer 100.0 1.1E-36 2.4E-41 273.6 20.0 184 1-195 272-455 (456)
13 PLN02167 UDP-glycosyltransfera 100.0 1.2E-36 2.7E-41 274.7 18.8 186 1-197 283-474 (475)
14 PLN03004 UDP-glycosyltransfera 100.0 1.5E-36 3.4E-41 271.6 17.6 168 1-183 273-449 (451)
15 PLN02764 glycosyltransferase f 100.0 5.9E-36 1.3E-40 267.5 19.5 184 1-199 260-449 (453)
16 PLN02152 indole-3-acetate beta 100.0 6.5E-36 1.4E-40 267.9 19.5 179 1-193 264-454 (455)
17 PLN02208 glycosyltransferase f 100.0 8.2E-36 1.8E-40 266.7 19.7 181 1-196 254-440 (442)
18 PLN02562 UDP-glycosyltransfera 100.0 7.7E-36 1.7E-40 267.6 19.0 171 1-193 276-447 (448)
19 PLN02448 UDP-glycosyltransfera 100.0 1.2E-35 2.7E-40 267.3 19.5 181 1-196 277-458 (459)
20 PLN00414 glycosyltransferase f 100.0 5.8E-35 1.3E-39 261.6 19.8 182 1-197 255-442 (446)
21 PLN02670 transferase, transfer 100.0 3E-34 6.6E-39 258.0 19.1 181 1-197 281-467 (472)
22 PF00201 UDPGT: UDP-glucoronos 100.0 8.3E-35 1.8E-39 263.8 14.0 180 1-211 279-462 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 8.9E-33 1.9E-37 251.2 18.6 181 1-211 299-486 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 1.4E-28 3E-33 222.5 15.8 186 1-211 280-473 (496)
25 COG1819 Glycosyl transferases, 99.9 1.9E-25 4.1E-30 198.3 16.5 163 1-197 240-402 (406)
26 TIGR01426 MGT glycosyltransfer 99.9 1.1E-23 2.3E-28 185.8 18.2 163 1-194 228-390 (392)
27 cd03784 GT1_Gtf_like This fami 99.9 1.4E-23 3E-28 185.1 14.9 158 1-192 242-400 (401)
28 COG0707 MurG UDP-N-acetylgluco 99.6 2.4E-15 5.3E-20 131.4 12.1 148 1-170 186-340 (357)
29 PF04101 Glyco_tran_28_C: Glyc 99.6 1.7E-17 3.6E-22 130.1 -2.9 135 1-154 2-144 (167)
30 PRK12446 undecaprenyldiphospho 99.6 8.1E-14 1.8E-18 121.9 14.9 130 1-154 188-325 (352)
31 PF13528 Glyco_trans_1_3: Glyc 99.4 5.9E-13 1.3E-17 113.9 10.2 118 1-150 195-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 4E-12 8.7E-17 109.6 10.0 70 52-124 228-301 (321)
33 PRK00726 murG undecaprenyldiph 99.3 1.6E-10 3.5E-15 100.4 14.4 116 29-165 214-335 (357)
34 cd03785 GT1_MurG MurG is an N- 99.2 1.1E-10 2.3E-15 100.8 11.6 131 18-167 202-337 (350)
35 PRK13608 diacylglycerol glucos 99.2 3.4E-10 7.4E-15 100.2 12.5 143 2-169 206-353 (391)
36 PLN02605 monogalactosyldiacylg 99.0 8.7E-09 1.9E-13 90.8 15.3 119 26-167 240-361 (382)
37 TIGR01133 murG undecaprenyldip 99.0 2.7E-09 5.9E-14 91.9 10.4 88 62-166 243-333 (348)
38 PRK13609 diacylglycerol glucos 99.0 9.2E-09 2E-13 90.3 13.8 141 2-167 206-351 (380)
39 TIGR03590 PseG pseudaminic aci 98.8 1.2E-08 2.5E-13 86.7 8.6 102 1-109 173-278 (279)
40 TIGR03492 conserved hypothetic 98.8 1.7E-07 3.7E-12 83.3 13.6 133 2-155 209-365 (396)
41 TIGR00215 lpxB lipid-A-disacch 98.6 2.1E-07 4.5E-12 82.4 9.9 92 64-173 262-370 (385)
42 COG4671 Predicted glycosyl tra 98.5 1.2E-06 2.6E-11 75.6 10.9 130 2-153 223-364 (400)
43 PRK00025 lpxB lipid-A-disaccha 98.5 9.9E-07 2.1E-11 77.2 9.9 106 64-193 256-374 (380)
44 KOG3349 Predicted glycosyltran 98.4 1.3E-06 2.7E-11 66.9 8.0 107 1-112 6-125 (170)
45 cd03795 GT1_like_4 This family 98.2 1.5E-05 3.3E-10 68.0 11.7 148 2-171 194-349 (357)
46 cd03814 GT1_like_2 This family 98.2 7E-05 1.5E-09 63.5 14.9 139 2-169 200-347 (364)
47 cd03817 GT1_UGDG_like This fam 98.2 5.6E-05 1.2E-09 64.1 13.2 146 2-171 205-360 (374)
48 cd03820 GT1_amsD_like This fam 98.1 0.0001 2.2E-09 61.6 12.6 147 2-171 181-336 (348)
49 cd03801 GT1_YqgM_like This fam 98.0 0.00025 5.3E-09 59.4 14.3 93 51-166 254-353 (374)
50 PF00534 Glycos_transf_1: Glyc 98.0 8.5E-05 1.8E-09 57.4 10.3 142 2-167 18-171 (172)
51 cd03794 GT1_wbuB_like This fam 98.0 0.0002 4.4E-09 60.7 13.3 146 2-170 223-381 (394)
52 cd05844 GT1_like_7 Glycosyltra 98.0 0.00012 2.6E-09 63.1 11.6 93 52-167 244-349 (367)
53 cd03808 GT1_cap1E_like This fa 98.0 0.00029 6.3E-09 59.1 13.7 144 2-168 191-343 (359)
54 PF13844 Glyco_transf_41: Glyc 97.9 0.00028 6E-09 63.9 13.9 147 1-165 287-441 (468)
55 PRK05749 3-deoxy-D-manno-octul 97.9 0.00046 1E-08 61.5 15.4 85 65-170 315-404 (425)
56 cd04946 GT1_AmsK_like This fam 97.9 0.00037 8E-09 62.1 14.4 97 52-168 288-391 (407)
57 cd03798 GT1_wlbH_like This fam 97.9 0.00037 8E-09 58.6 13.5 83 52-155 258-345 (377)
58 cd03823 GT1_ExpE7_like This fa 97.9 0.00029 6.3E-09 59.5 12.9 142 2-167 194-342 (359)
59 cd03799 GT1_amsK_like This is 97.9 0.0003 6.5E-09 59.9 13.0 145 2-167 182-340 (355)
60 cd03821 GT1_Bme6_like This fam 97.9 0.00049 1.1E-08 58.2 13.7 95 51-168 260-359 (375)
61 PLN02871 UDP-sulfoquinovose:DA 97.9 0.0004 8.7E-09 62.8 13.6 139 2-169 266-415 (465)
62 cd03804 GT1_wbaZ_like This fam 97.9 0.00014 3E-09 62.8 10.1 137 2-166 198-339 (351)
63 cd03800 GT1_Sucrose_synthase T 97.8 0.00055 1.2E-08 59.4 13.9 94 52-168 282-382 (398)
64 cd04949 GT1_gtfA_like This fam 97.8 0.00026 5.6E-09 61.5 11.7 101 52-172 260-363 (372)
65 PRK09922 UDP-D-galactose:(gluc 97.8 0.00059 1.3E-08 59.4 13.7 146 2-171 183-343 (359)
66 COG3980 spsG Spore coat polysa 97.8 0.00031 6.8E-09 59.2 11.0 142 1-169 161-304 (318)
67 PRK15427 colanic acid biosynth 97.8 0.00099 2.1E-08 59.4 15.0 96 52-168 278-385 (406)
68 cd03807 GT1_WbnK_like This fam 97.8 0.00068 1.5E-08 57.0 13.0 89 53-166 251-344 (365)
69 cd04962 GT1_like_5 This family 97.8 0.001 2.3E-08 57.2 14.3 96 52-168 252-350 (371)
70 COG5017 Uncharacterized conser 97.7 0.0002 4.4E-09 54.0 7.7 107 1-120 2-121 (161)
71 cd03822 GT1_ecORF704_like This 97.7 0.001 2.2E-08 56.5 12.9 97 52-170 246-350 (366)
72 PRK10307 putative glycosyl tra 97.7 0.0031 6.7E-08 55.8 16.3 97 53-170 284-389 (412)
73 TIGR03088 stp2 sugar transfera 97.6 0.0025 5.5E-08 55.3 14.4 92 53-167 255-351 (374)
74 cd03786 GT1_UDP-GlcNAc_2-Epime 97.6 0.00041 8.9E-09 60.1 9.4 128 2-154 202-337 (363)
75 TIGR03087 stp1 sugar transfera 97.6 0.0024 5.2E-08 56.3 14.3 139 2-168 227-376 (397)
76 cd03811 GT1_WabH_like This fam 97.6 0.0013 2.8E-08 54.8 12.0 91 52-163 245-341 (353)
77 cd03816 GT1_ALG1_like This fam 97.6 0.0016 3.4E-08 58.2 13.2 92 53-169 294-399 (415)
78 TIGR00236 wecB UDP-N-acetylglu 97.6 0.0016 3.6E-08 56.7 12.7 112 16-154 214-334 (365)
79 PRK14089 ipid-A-disaccharide s 97.6 0.00046 9.9E-09 60.5 8.9 95 64-172 230-332 (347)
80 TIGR03449 mycothiol_MshA UDP-N 97.4 0.0031 6.8E-08 55.4 12.9 94 52-168 282-382 (405)
81 cd03809 GT1_mtfB_like This fam 97.4 0.0014 3E-08 55.7 9.8 142 2-167 198-349 (365)
82 cd03819 GT1_WavL_like This fam 97.4 0.0066 1.4E-07 51.8 13.8 148 2-170 188-347 (355)
83 cd03805 GT1_ALG2_like This fam 97.4 0.004 8.7E-08 54.2 12.6 93 52-168 279-378 (392)
84 cd04951 GT1_WbdM_like This fam 97.4 0.003 6.5E-08 53.8 11.6 128 2-154 191-326 (360)
85 cd03812 GT1_CapH_like This fam 97.3 0.0029 6.3E-08 54.0 11.2 89 52-164 248-341 (358)
86 TIGR02149 glgA_Coryne glycogen 97.3 0.0077 1.7E-07 52.4 13.9 97 55-168 262-366 (388)
87 COG1519 KdtA 3-deoxy-D-manno-o 97.3 0.0097 2.1E-07 53.0 14.1 100 54-173 301-405 (419)
88 cd03825 GT1_wcfI_like This fam 97.3 0.0062 1.3E-07 52.0 12.8 94 52-168 243-344 (365)
89 PF02350 Epimerase_2: UDP-N-ac 97.3 0.0012 2.6E-08 57.8 7.9 112 14-154 200-318 (346)
90 PRK15484 lipopolysaccharide 1, 97.2 0.039 8.4E-07 48.6 16.6 81 52-154 256-344 (380)
91 cd03813 GT1_like_3 This family 97.1 0.014 2.9E-07 53.1 13.5 93 52-167 353-455 (475)
92 cd03796 GT1_PIG-A_like This fa 97.1 0.013 2.9E-07 51.6 13.1 78 52-154 249-333 (398)
93 cd03818 GT1_ExpC_like This fam 97.1 0.0081 1.8E-07 52.9 11.4 97 52-169 280-381 (396)
94 PF13692 Glyco_trans_1_4: Glyc 97.0 0.0018 3.9E-08 47.9 5.9 80 52-154 52-135 (135)
95 TIGR02918 accessory Sec system 97.0 0.011 2.4E-07 54.3 12.1 103 52-171 375-483 (500)
96 cd04955 GT1_like_6 This family 96.9 0.034 7.4E-07 47.4 13.9 136 2-167 196-343 (363)
97 KOG4626 O-linked N-acetylgluco 96.8 0.017 3.7E-07 53.8 10.8 118 2-122 762-889 (966)
98 PRK15179 Vi polysaccharide bio 96.6 0.077 1.7E-06 50.8 14.5 95 52-167 573-672 (694)
99 PRK09814 beta-1,6-galactofuran 96.6 0.015 3.3E-07 50.3 9.1 96 52-173 206-317 (333)
100 TIGR02472 sucr_P_syn_N sucrose 96.5 0.11 2.3E-06 46.7 14.0 95 52-167 316-419 (439)
101 cd03802 GT1_AviGT4_like This f 96.4 0.057 1.2E-06 45.5 11.6 124 3-151 175-306 (335)
102 cd03792 GT1_Trehalose_phosphor 96.3 0.25 5.5E-06 42.9 15.2 92 52-168 251-351 (372)
103 COG3914 Spy Predicted O-linked 96.2 0.16 3.5E-06 47.0 13.5 116 1-120 432-560 (620)
104 PRK10017 colanic acid biosynth 95.8 0.45 9.7E-06 43.0 14.6 137 16-173 262-412 (426)
105 PRK15490 Vi polysaccharide bio 95.8 0.33 7.2E-06 45.3 14.0 64 52-122 454-522 (578)
106 PF13524 Glyco_trans_1_2: Glyc 95.6 0.15 3.3E-06 35.2 8.6 65 78-166 9-74 (92)
107 PLN02949 transferase, transfer 95.5 0.1 2.2E-06 47.6 9.5 95 52-169 334-438 (463)
108 cd04950 GT1_like_1 Glycosyltra 95.5 0.52 1.1E-05 41.3 13.7 120 2-151 208-338 (373)
109 cd03791 GT1_Glycogen_synthase_ 95.3 0.42 9E-06 43.1 12.7 82 52-151 350-440 (476)
110 TIGR03568 NeuC_NnaA UDP-N-acet 95.3 0.28 6E-06 43.2 11.0 114 11-151 217-337 (365)
111 TIGR02468 sucrsPsyn_pln sucros 95.1 0.18 3.8E-06 50.2 10.1 97 52-169 547-652 (1050)
112 PRK14098 glycogen synthase; Pr 94.9 0.83 1.8E-05 41.9 13.4 80 52-151 361-449 (489)
113 TIGR02095 glgA glycogen/starch 94.8 1.2 2.5E-05 40.4 14.1 130 3-153 295-436 (473)
114 PHA01633 putative glycosyl tra 94.7 0.41 8.8E-06 41.9 10.5 83 52-151 200-305 (335)
115 PLN02275 transferase, transfer 94.6 0.53 1.2E-05 41.2 11.0 75 53-151 286-371 (371)
116 cd03806 GT1_ALG11_like This fa 93.9 0.68 1.5E-05 41.4 10.4 80 52-155 304-393 (419)
117 PLN02316 synthase/transferase 93.8 2.3 4.9E-05 42.6 14.4 113 53-189 900-1027(1036)
118 PF04007 DUF354: Protein of un 93.5 0.82 1.8E-05 40.0 9.9 74 14-97 199-273 (335)
119 PRK00654 glgA glycogen synthas 93.5 2 4.4E-05 38.9 12.9 69 65-151 352-426 (466)
120 PLN02939 transferase, transfer 92.8 3 6.6E-05 41.4 13.4 83 52-151 836-929 (977)
121 PLN02846 digalactosyldiacylgly 92.0 1.2 2.6E-05 40.7 9.2 72 57-154 288-363 (462)
122 COG0381 WecB UDP-N-acetylgluco 92.0 2.1 4.6E-05 38.0 10.3 83 53-164 262-347 (383)
123 cd01635 Glycosyltransferase_GT 91.8 0.99 2.1E-05 35.1 7.6 50 51-102 159-216 (229)
124 PF02684 LpxB: Lipid-A-disacch 91.8 2.8 6E-05 37.3 11.0 109 63-183 254-365 (373)
125 TIGR03713 acc_sec_asp1 accesso 91.5 1.6 3.4E-05 40.5 9.5 92 53-172 409-506 (519)
126 PRK10125 putative glycosyl tra 90.1 10 0.00022 33.8 13.1 89 16-122 258-355 (405)
127 PRK14099 glycogen synthase; Pr 88.7 5.5 0.00012 36.5 10.6 78 69-164 369-457 (485)
128 COG0763 LpxB Lipid A disacchar 88.4 4.8 0.0001 35.7 9.5 95 66-173 261-363 (381)
129 PHA01630 putative group 1 glyc 87.7 0.84 1.8E-05 39.7 4.4 35 65-99 205-241 (331)
130 TIGR02400 trehalose_OtsA alpha 87.5 5.2 0.00011 36.4 9.6 103 59-194 342-455 (456)
131 PRK01021 lpxB lipid-A-disaccha 87.0 21 0.00046 33.8 13.3 97 64-173 483-590 (608)
132 PLN02501 digalactosyldiacylgly 85.7 5.4 0.00012 38.5 8.8 75 55-155 603-682 (794)
133 TIGR02919 accessory Sec system 85.0 16 0.00034 33.2 11.3 92 53-170 328-424 (438)
134 PF06258 Mito_fiss_Elm1: Mitoc 84.6 25 0.00055 30.4 11.9 90 11-101 162-259 (311)
135 TIGR02470 sucr_synth sucrose s 84.2 9.9 0.00021 37.1 10.1 65 81-165 657-724 (784)
136 TIGR02193 heptsyl_trn_I lipopo 83.2 3.7 8.1E-05 35.0 6.3 84 11-97 195-279 (319)
137 PRK07313 phosphopantothenoylcy 83.0 21 0.00047 28.2 11.1 133 16-151 17-178 (182)
138 PLN00142 sucrose synthase 82.8 14 0.00031 36.2 10.5 70 75-165 670-747 (815)
139 PLN03063 alpha,alpha-trehalose 82.7 7.1 0.00015 38.2 8.6 100 65-197 371-479 (797)
140 cd03789 GT1_LPS_heptosyltransf 81.5 6.4 0.00014 32.8 7.0 92 2-97 125-223 (279)
141 PF06722 DUF1205: Protein of u 79.3 1.8 3.9E-05 30.9 2.4 38 1-38 43-85 (97)
142 cd03793 GT1_Glycogen_synthase_ 77.2 22 0.00049 33.5 9.5 78 64-154 469-552 (590)
143 PRK05579 bifunctional phosphop 76.9 41 0.00089 30.2 10.9 134 15-151 21-181 (399)
144 PRK02797 4-alpha-L-fucosyltran 76.4 51 0.0011 28.7 10.8 128 3-150 149-291 (322)
145 PRK10964 ADP-heptose:LPS hepto 75.5 7.1 0.00015 33.4 5.6 82 11-97 194-278 (322)
146 TIGR00521 coaBC_dfp phosphopan 74.7 50 0.0011 29.6 10.8 133 16-151 19-177 (390)
147 PF05159 Capsule_synth: Capsul 74.4 15 0.00033 30.6 7.2 82 15-99 141-226 (269)
148 PRK13982 bifunctional SbtC-lik 73.6 75 0.0016 29.3 11.9 133 16-151 86-246 (475)
149 TIGR02201 heptsyl_trn_III lipo 73.3 12 0.00025 32.3 6.4 93 2-97 185-285 (344)
150 cd03788 GT1_TPS Trehalose-6-Ph 72.6 12 0.00026 34.0 6.6 103 58-193 346-459 (460)
151 COG4370 Uncharacterized protei 71.9 19 0.00042 31.3 7.1 66 82-164 320-389 (412)
152 PF01075 Glyco_transf_9: Glyco 71.0 13 0.00027 30.2 5.8 93 2-97 109-208 (247)
153 COG3660 Predicted nucleoside-d 70.1 20 0.00043 30.6 6.7 78 19-97 189-271 (329)
154 PRK10422 lipopolysaccharide co 69.9 18 0.00038 31.4 6.8 93 2-97 187-287 (352)
155 PRK14501 putative bifunctional 63.6 26 0.00057 33.8 7.1 112 57-197 346-464 (726)
156 PLN02470 acetolactate synthase 62.3 14 0.00031 34.6 5.0 92 4-98 2-109 (585)
157 KOG0853 Glycosyltransferase [C 59.8 41 0.0009 31.1 7.3 55 82-155 380-434 (495)
158 cd07038 TPP_PYR_PDC_IPDC_like 59.6 78 0.0017 24.3 8.4 76 19-98 3-92 (162)
159 PF05693 Glycogen_syn: Glycoge 58.9 17 0.00037 34.4 4.7 98 63-173 463-567 (633)
160 PF07429 Glyco_transf_56: 4-al 58.8 1.3E+02 0.0028 26.6 10.5 130 3-151 188-331 (360)
161 PRK04885 ppnK inorganic polyph 57.8 24 0.00051 29.8 5.1 26 73-98 37-68 (265)
162 COG0438 RfaG Glycosyltransfera 57.6 97 0.0021 24.7 16.1 80 52-154 256-342 (381)
163 PRK12446 undecaprenyldiphospho 55.8 48 0.0011 28.9 7.0 92 2-97 6-120 (352)
164 TIGR02398 gluc_glyc_Psyn gluco 55.3 95 0.0021 28.7 8.9 110 56-196 365-483 (487)
165 PF06506 PrpR_N: Propionate ca 54.8 16 0.00036 28.5 3.5 33 68-101 31-63 (176)
166 PF07319 DnaI_N: Primosomal pr 53.6 4.2 9E-05 28.7 -0.1 15 159-173 15-29 (94)
167 PRK10916 ADP-heptose:LPS hepto 52.0 42 0.00092 28.9 6.0 92 2-97 184-286 (348)
168 COG1422 Predicted membrane pro 51.9 58 0.0013 26.4 6.1 72 82-180 23-95 (201)
169 PRK01231 ppnK inorganic polyph 49.1 1.4E+02 0.0031 25.5 8.6 51 73-154 64-118 (295)
170 TIGR02195 heptsyl_trn_II lipop 48.8 87 0.0019 26.7 7.4 82 11-97 191-276 (334)
171 PF04464 Glyphos_transf: CDP-G 47.8 13 0.00027 32.4 2.0 115 53-190 252-367 (369)
172 cd07037 TPP_PYR_MenD Pyrimidin 47.7 39 0.00085 26.2 4.6 77 19-98 3-93 (162)
173 COG0859 RfaF ADP-heptose:LPS h 46.9 60 0.0013 28.0 6.1 93 1-97 178-276 (334)
174 PRK14077 pnk inorganic polypho 46.4 45 0.00098 28.5 5.1 26 73-98 66-95 (287)
175 COG0801 FolK 7,8-dihydro-6-hyd 46.3 34 0.00074 26.7 3.9 34 1-34 4-37 (160)
176 PRK01911 ppnK inorganic polyph 44.8 50 0.0011 28.3 5.1 26 73-98 66-95 (292)
177 PRK02155 ppnK NAD(+)/NADH kina 44.3 46 0.00099 28.5 4.8 26 73-98 65-94 (291)
178 TIGR02113 coaC_strep phosphopa 44.3 1.6E+02 0.0034 23.2 11.1 58 90-149 111-175 (177)
179 PRK02649 ppnK inorganic polyph 44.0 41 0.00089 29.0 4.5 27 72-98 69-99 (305)
180 PLN02929 NADH kinase 43.1 36 0.00077 29.4 4.0 63 73-154 66-137 (301)
181 PF04558 tRNA_synt_1c_R1: Glut 43.0 40 0.00086 26.4 3.9 30 104-151 101-130 (164)
182 PRK04539 ppnK inorganic polyph 42.9 56 0.0012 28.0 5.2 52 72-154 69-124 (296)
183 PF06180 CbiK: Cobalt chelatas 41.0 36 0.00079 28.7 3.6 37 1-37 4-43 (262)
184 cd07025 Peptidase_S66 LD-Carbo 40.9 57 0.0012 27.6 4.9 71 14-100 49-121 (282)
185 PRK03372 ppnK inorganic polyph 39.9 59 0.0013 28.1 4.8 52 72-154 73-128 (306)
186 PRK08155 acetolactate synthase 39.2 68 0.0015 29.8 5.5 90 4-98 3-109 (564)
187 cd07035 TPP_PYR_POX_like Pyrim 38.8 1.1E+02 0.0023 22.9 5.7 77 19-99 3-93 (155)
188 PRK03378 ppnK inorganic polyph 38.7 59 0.0013 27.8 4.6 52 72-154 64-119 (292)
189 PRK13059 putative lipid kinase 38.6 87 0.0019 26.5 5.7 27 73-99 58-90 (295)
190 PRK11914 diacylglycerol kinase 38.3 1.1E+02 0.0023 26.0 6.2 26 74-99 67-96 (306)
191 cd07039 TPP_PYR_POX Pyrimidine 38.2 1.8E+02 0.004 22.3 10.6 76 18-98 5-96 (164)
192 PF09547 Spore_IV_A: Stage IV 38.0 1.3E+02 0.0029 27.6 6.8 74 66-151 141-233 (492)
193 PRK01185 ppnK inorganic polyph 37.7 68 0.0015 27.2 4.8 51 73-154 54-105 (271)
194 PRK13057 putative lipid kinase 37.0 1.2E+02 0.0026 25.5 6.3 26 74-99 53-82 (287)
195 COG4394 Uncharacterized protei 36.6 55 0.0012 28.3 4.0 79 14-95 189-280 (370)
196 cd01141 TroA_d Periplasmic bin 36.3 86 0.0019 24.1 5.0 31 68-100 68-101 (186)
197 PRK10117 trehalose-6-phosphate 36.1 2.2E+02 0.0047 26.3 8.1 103 65-197 347-455 (474)
198 PRK14075 pnk inorganic polypho 35.9 82 0.0018 26.3 5.0 27 72-98 42-69 (256)
199 TIGR00725 conserved hypothetic 35.2 28 0.0006 26.9 1.9 38 62-99 83-123 (159)
200 cd07062 Peptidase_S66_mccF_lik 34.1 85 0.0018 26.9 5.0 43 57-101 82-126 (308)
201 cd01840 SGNH_hydrolase_yrhL_li 33.6 1.2E+02 0.0027 22.5 5.4 35 1-36 54-88 (150)
202 PRK03501 ppnK inorganic polyph 33.3 94 0.002 26.2 5.0 25 73-97 41-70 (264)
203 PF02776 TPP_enzyme_N: Thiamin 32.0 60 0.0013 25.0 3.4 78 17-99 5-98 (172)
204 KOG4127 Renal dipeptidase [Pos 31.9 1.7E+02 0.0037 26.1 6.3 63 16-89 255-323 (419)
205 PRK02231 ppnK inorganic polyph 31.8 1E+02 0.0023 26.1 5.0 28 69-98 42-73 (272)
206 PRK07449 2-succinyl-5-enolpyru 31.8 1.6E+02 0.0034 27.4 6.7 81 15-98 11-105 (568)
207 KOG2941 Beta-1,4-mannosyltrans 31.7 3.8E+02 0.0083 24.0 11.0 88 58-168 324-423 (444)
208 TIGR00147 lipid kinase, YegS/R 31.2 1.2E+02 0.0025 25.5 5.3 26 74-99 60-91 (293)
209 cd01147 HemV-2 Metal binding p 31.1 96 0.0021 25.1 4.7 31 68-100 73-107 (262)
210 cd03412 CbiK_N Anaerobic cobal 30.9 70 0.0015 23.6 3.4 36 1-36 4-41 (127)
211 PRK14076 pnk inorganic polypho 30.5 83 0.0018 29.6 4.6 52 72-154 349-404 (569)
212 PLN02935 Bifunctional NADH kin 30.4 1.1E+02 0.0024 28.4 5.2 52 72-154 263-318 (508)
213 PF10093 DUF2331: Uncharacteri 29.9 1E+02 0.0023 27.5 4.8 84 11-97 192-288 (374)
214 PF00731 AIRC: AIR carboxylase 29.8 2.6E+02 0.0056 21.5 9.9 85 1-104 3-91 (150)
215 COG2159 Predicted metal-depend 29.6 3.5E+02 0.0077 23.0 8.3 67 11-87 141-210 (293)
216 PF00982 Glyco_transf_20: Glyc 29.6 2.3E+02 0.005 26.0 7.2 100 65-194 368-473 (474)
217 PF08030 NAD_binding_6: Ferric 29.4 33 0.00072 25.6 1.5 38 1-38 5-47 (156)
218 PRK06456 acetolactate synthase 29.0 1.3E+02 0.0029 28.0 5.7 82 17-98 6-101 (572)
219 PRK06270 homoserine dehydrogen 29.0 3.9E+02 0.0084 23.2 8.5 58 62-120 80-149 (341)
220 PRK03708 ppnK inorganic polyph 28.6 43 0.00094 28.4 2.2 28 72-99 58-88 (277)
221 PRK06276 acetolactate synthase 28.3 4.9E+02 0.011 24.3 9.4 77 18-98 6-96 (586)
222 PRK04761 ppnK inorganic polyph 28.3 50 0.0011 27.6 2.5 27 73-99 27-57 (246)
223 PLN03064 alpha,alpha-trehalose 27.4 3.4E+02 0.0074 27.4 8.3 102 65-197 455-563 (934)
224 PRK08527 acetolactate synthase 27.2 1.9E+02 0.004 27.0 6.3 79 17-98 7-99 (563)
225 PLN02496 probable phosphopanto 26.9 2.4E+02 0.0051 23.0 6.1 86 63-151 90-197 (209)
226 smart00096 UTG Uteroglobin. 26.8 2E+02 0.0043 19.1 5.3 51 138-196 16-66 (69)
227 PRK13337 putative lipid kinase 26.1 2.3E+02 0.0049 24.0 6.2 27 73-99 59-91 (304)
228 PRK14116 gpmA phosphoglyceromu 26.0 40 0.00086 27.5 1.5 22 73-94 177-198 (228)
229 PRK15062 hydrogenase isoenzyme 25.9 36 0.00079 30.1 1.3 67 112-202 209-275 (364)
230 TIGR02836 spore_IV_A stage IV 25.9 2.8E+02 0.006 25.6 6.8 74 65-151 139-233 (492)
231 PF06825 HSBP1: Heat shock fac 25.6 1.2E+02 0.0026 19.1 3.3 47 141-194 2-48 (54)
232 PF01924 HypD: Hydrogenase for 25.4 22 0.00049 31.3 -0.1 110 52-202 154-270 (355)
233 cd03784 GT1_Gtf_like This fami 24.8 3.8E+02 0.0083 23.1 7.6 35 1-37 4-38 (401)
234 COG0297 GlgA Glycogen synthase 24.8 3.2E+02 0.0069 25.3 7.2 149 15-191 311-473 (487)
235 PF01993 MTD: methylene-5,6,7, 24.7 4.3E+02 0.0093 22.3 7.9 36 85-122 79-115 (276)
236 TIGR02482 PFKA_ATP 6-phosphofr 24.5 64 0.0014 27.8 2.5 37 66-102 86-126 (301)
237 PRK13055 putative lipid kinase 24.4 1.9E+02 0.0041 25.0 5.5 26 74-99 62-93 (334)
238 PRK14119 gpmA phosphoglyceromu 24.0 48 0.001 26.9 1.6 21 74-94 178-198 (228)
239 smart00046 DAGKc Diacylglycero 23.6 61 0.0013 23.6 1.9 27 74-100 52-87 (124)
240 COG0826 Collagenase and relate 23.4 4.5E+02 0.0097 23.1 7.6 112 11-150 46-159 (347)
241 PLN02859 glutamine-tRNA ligase 23.3 1.6E+02 0.0034 29.0 5.1 51 104-173 103-156 (788)
242 PRK13463 phosphatase PhoE; Pro 23.2 53 0.0011 26.1 1.7 22 74-95 147-168 (203)
243 PRK08199 thiamine pyrophosphat 22.9 1.8E+02 0.0039 27.0 5.4 79 16-97 11-103 (557)
244 TIGR03848 MSMEG_4193 probable 22.7 58 0.0013 25.7 1.8 22 74-95 148-169 (204)
245 PF01372 Melittin: Melittin; 22.6 14 0.00031 19.3 -1.1 17 80-96 1-17 (26)
246 PF02826 2-Hacid_dh_C: D-isome 22.4 1.1E+02 0.0025 23.6 3.4 90 18-148 50-142 (178)
247 TIGR00075 hypD hydrogenase exp 22.4 46 0.001 29.5 1.2 66 112-201 215-280 (369)
248 TIGR03609 S_layer_CsaB polysac 22.0 4.4E+02 0.0095 21.9 7.2 32 65-99 246-277 (298)
249 PRK02645 ppnK inorganic polyph 21.3 83 0.0018 27.0 2.6 27 73-99 59-89 (305)
250 PRK07525 sulfoacetaldehyde ace 21.2 2.9E+02 0.0063 25.9 6.4 79 16-98 9-101 (588)
251 TIGR03162 ribazole_cobC alpha- 20.7 60 0.0013 24.8 1.5 21 74-94 141-161 (177)
252 TIGR00173 menD 2-succinyl-5-en 20.7 2.9E+02 0.0062 24.8 6.1 77 18-97 5-95 (432)
253 PLN02470 acetolactate synthase 20.6 7E+02 0.015 23.3 10.7 59 75-151 477-544 (585)
254 PF01497 Peripla_BP_2: Peripla 20.6 2E+02 0.0043 22.7 4.6 32 68-101 59-93 (238)
255 cd00763 Bacterial_PFK Phosphof 20.5 85 0.0018 27.2 2.5 37 66-102 87-126 (317)
256 PRK14118 gpmA phosphoglyceromu 20.4 60 0.0013 26.4 1.5 22 74-95 177-198 (227)
257 TIGR00730 conserved hypothetic 20.2 1.9E+02 0.004 22.8 4.2 35 64-98 90-133 (178)
258 KOG1185 Thiamine pyrophosphate 20.2 4.5E+02 0.0098 24.6 7.0 114 4-154 428-548 (571)
259 PRK13932 stationary phase surv 20.2 1.6E+02 0.0035 24.7 4.1 24 76-99 109-133 (257)
260 PF10083 DUF2321: Uncharacteri 20.2 3.4E+02 0.0075 21.1 5.4 72 97-193 78-149 (158)
261 PRK15004 alpha-ribazole phosph 20.1 57 0.0012 25.7 1.3 22 74-95 145-166 (199)
262 TIGR01498 folK 2-amino-4-hydro 20.1 1.3E+02 0.0027 22.4 3.0 28 1-28 1-28 (127)
No 1
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.6e-37 Score=279.55 Aligned_cols=184 Identities=40% Similarity=0.695 Sum_probs=166.5
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc--------------------ccccchhHHHhhcCCCeEEeec
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA--------------------FLLLDKDFEERVKDRGLIIKGW 60 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~--------------------~~~lp~~~~~~~~~~~~~~~~~ 60 (212)
|||||||+..++.+++.+++.+|+.++++|||++.+.. .+.+|+++.+++...|+.+.+|
T Consensus 266 vyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W 345 (481)
T PLN02992 266 LYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSW 345 (481)
T ss_pred EEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeec
Confidence 79999999999999999999999999999999996321 1248889999999999999999
Q ss_pred cChhhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCH
Q 036598 61 APQVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRR 140 (212)
Q Consensus 61 ~p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 140 (212)
+||.+||+|++++.||||||+||++|++++|||||++|+++||+.||+++++.+|+|+.+.... ..+++
T Consensus 346 ~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-----------~~~~~ 414 (481)
T PLN02992 346 APQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK-----------EVISR 414 (481)
T ss_pred CCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC-----------CcccH
Confidence 9999999999999999999999999999999999999999999999999976789999996421 13899
Q ss_pred HHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHhhh
Q 036598 141 DRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVS--KGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 141 ~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~--~~g~~~~~~~~li~~l~~~~ 197 (212)
++|.++|+++| .+ ++++++++|+++++++++++++ +||||..++.+||+++.+-.
T Consensus 415 ~~l~~av~~vm-~~-~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~ 471 (481)
T PLN02992 415 SKIEALVRKVM-VE-EEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFL 471 (481)
T ss_pred HHHHHHHHHHh-cC-CchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHH
Confidence 99999999999 85 5788999999999999999995 59999999999999987653
No 2
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.7e-37 Score=280.18 Aligned_cols=196 Identities=58% Similarity=1.060 Sum_probs=171.2
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-----cc-ccchhHHHhhcCCCeEEeeccChhhhcCCCCccc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-----FL-LLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGG 74 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-----~~-~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~ 74 (212)
|||||||+..+.++++.+++.+|+.++.+|||++.... .. .+|+++.++..+.|+.+.+|+||..+|+|+++++
T Consensus 286 vyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~ 365 (491)
T PLN02534 286 IYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGG 365 (491)
T ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccce
Confidence 79999999999999999999999999999999998531 11 3678888777788888889999999999999999
Q ss_pred eeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 75 FMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|||||||||++|++++|||+|++|++.||+.||+++++.+|+|+.+......+|.+++..+...++++|.++|+++| .+
T Consensus 366 fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m-~~ 444 (491)
T PLN02534 366 FLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLM-DD 444 (491)
T ss_pred EEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHh-cc
Confidence 99999999999999999999999999999999999999999999986443333432111112479999999999999 73
Q ss_pred -ccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 155 -GEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 155 -~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
++++++||+||++|++++++++.+||||..++++||+++..+.
T Consensus 445 ~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 445 GGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999998664
No 3
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.5e-37 Score=278.60 Aligned_cols=183 Identities=36% Similarity=0.657 Sum_probs=165.2
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCC-------------cccccchhHHHhhcCCCeEEeeccChhhhc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSD-------------AFLLLDKDFEERVKDRGLIIKGWAPQVLIL 67 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~-------------~~~~lp~~~~~~~~~~~~~~~~~~p~~~il 67 (212)
|||||||+..++.+++.+++.+|+.++++|||++... ..+.+|+++.+++...++.+.+|+||..+|
T Consensus 270 vyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL 349 (470)
T PLN03015 270 VYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEIL 349 (470)
T ss_pred EEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHh
Confidence 7999999999999999999999999999999999732 122588899888888898888999999999
Q ss_pred CCCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 68 NHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 68 ~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
+|++++.|||||||||++|++++|||||++|+++||+.||+++++.+|+|+.+.... ....+++++|.++|
T Consensus 350 ~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~---------~~~~v~~e~i~~~v 420 (470)
T PLN03015 350 SHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP---------SEKVIGREEVASLV 420 (470)
T ss_pred ccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc---------cCCccCHHHHHHHH
Confidence 999999999999999999999999999999999999999999988899999995211 01248999999999
Q ss_pred HHHhhcC-ccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036598 148 YQFMING-GEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDL 193 (212)
Q Consensus 148 ~~vl~~~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l 193 (212)
+++| .+ ++++++||+||+++++++++++++||||+.++.+|+.++
T Consensus 421 ~~lm-~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 421 RKIV-AEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred HHHH-ccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 9999 74 378999999999999999999999999999999999876
No 4
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.9e-37 Score=280.11 Aligned_cols=189 Identities=42% Similarity=0.724 Sum_probs=167.7
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc------------ccccchhHHHhhcCCCeEEeeccChhhhcC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA------------FLLLDKDFEERVKDRGLIIKGWAPQVLILN 68 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~------------~~~lp~~~~~~~~~~~~~~~~~~p~~~il~ 68 (212)
|||||||+..++.+++.+++.+|+.++++|||++.... ...+|+++.++....++.+.+|+||..||+
T Consensus 275 vyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~ 354 (480)
T PLN00164 275 VFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILA 354 (480)
T ss_pred EEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhc
Confidence 79999999999999999999999999999999998531 123788888888888998889999999999
Q ss_pred CCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 69 HPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 69 ~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
|++++.|||||||||++|++++|||||++|+++||+.||+++++.+|+|+.+.... ++ ...+++++|.++|+
T Consensus 355 h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~---~~-----~~~~~~e~l~~av~ 426 (480)
T PLN00164 355 HAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR---KR-----DNFVEAAELERAVR 426 (480)
T ss_pred CcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc---cc-----CCcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999998878889999985321 00 12379999999999
Q ss_pred HHhhcCcc-chHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhh
Q 036598 149 QFMINGGE-EVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQKV 198 (212)
Q Consensus 149 ~vl~~~~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~~ 198 (212)
++| .+++ +++.+|+||+++++++++++++||||+.++.+||+++.....
T Consensus 427 ~vm-~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~~ 476 (480)
T PLN00164 427 SLM-GGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGAV 476 (480)
T ss_pred HHh-cCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhccC
Confidence 999 8765 589999999999999999999999999999999999976543
No 5
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.8e-37 Score=278.63 Aligned_cols=185 Identities=36% Similarity=0.703 Sum_probs=161.3
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc---ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceee
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA---FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMT 77 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~---~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~ 77 (212)
|||||||...++.+++.+++.+|+.++++|||+++... .+.+|+++.++...+ ..+.+|+||..||+|++++.|||
T Consensus 278 VyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~~~-g~i~~W~PQ~~IL~H~~vg~FvT 356 (468)
T PLN02207 278 VFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGR-GMICGWSPQVEILAHKAVGGFVS 356 (468)
T ss_pred EEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcCCC-eEEEEeCCHHHHhcccccceeee
Confidence 79999999999999999999999999999999998532 346888887776544 46779999999999999999999
Q ss_pred cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccc
Q 036598 78 HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEE 157 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 157 (212)
||||||++|++++|||||++|+++||+.||+++++.+|+|+.+..+.. +.. ...+++++|.++|+++| . ++
T Consensus 357 H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~--~~~----~~~v~~e~i~~av~~vm-~--~~ 427 (468)
T PLN02207 357 HCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYR--VHS----DEIVNANEIETAIRCVM-N--KD 427 (468)
T ss_pred cCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccc--ccc----CCcccHHHHHHHHHHHH-h--cc
Confidence 999999999999999999999999999999998787899998853210 000 12369999999999999 6 24
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036598 158 VEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLN 195 (212)
Q Consensus 158 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~ 195 (212)
+++||+||+++++++++++.+||||+.++.+||+++..
T Consensus 428 ~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 428 NNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999999864
No 6
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2e-37 Score=277.71 Aligned_cols=178 Identities=42% Similarity=0.695 Sum_probs=161.1
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc---c---cccchhHHHhhcCCCeEEeeccChhhhcCCCCccc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA---F---LLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGG 74 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~---~---~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~ 74 (212)
|||||||...++.+++.+++.+|+.++.+|+|++.... . ..+|+++.++....+ .+.+|+||.+||+|++++.
T Consensus 267 vyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~ 345 (451)
T PLN02410 267 IFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGG 345 (451)
T ss_pred EEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCe-EEEccCCHHHHhCCCccCe
Confidence 79999999999999999999999999999999998531 1 247989888776554 6669999999999999999
Q ss_pred eeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 75 FMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|||||||||+.|++++|||||++|+++||+.||+++++.+|+|+.+. .. +++++|+++|+++| .+
T Consensus 346 fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~-------------~~~~~v~~av~~lm-~~ 410 (451)
T PLN02410 346 FWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GD-------------LDRGAVERAVKRLM-VE 410 (451)
T ss_pred eeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-Cc-------------ccHHHHHHHHHHHH-cC
Confidence 99999999999999999999999999999999999977779999995 22 89999999999999 86
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036598 155 GEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLN 195 (212)
Q Consensus 155 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~ 195 (212)
+ ++++||+|++++++++++++++||||..++.+||+++..
T Consensus 411 ~-~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 411 E-EGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred C-cHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 4 488999999999999999999999999999999998753
No 7
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.1e-37 Score=278.03 Aligned_cols=185 Identities=33% Similarity=0.627 Sum_probs=162.7
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc------ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA------FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGG 74 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~------~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~ 74 (212)
|||||||+..++.+++.+++.+|+..+++|||++.... ...+|+++.++.. .|..+.+|+||.+||+|+++++
T Consensus 280 vyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~-~~g~v~~W~PQ~~iL~H~~v~~ 358 (480)
T PLN02555 280 VYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAG-DKGKIVQWCPQEKVLAHPSVAC 358 (480)
T ss_pred eEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcC-CceEEEecCCHHHHhCCCccCe
Confidence 79999999999999999999999999999999987421 1357877766553 4567779999999999999999
Q ss_pred eeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 75 FMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|||||||||++|++++|||||++|+++||+.|++++++.+|+|+.+.... .. ...+++++|.++|+++| .+
T Consensus 359 FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~----~~----~~~v~~~~v~~~v~~vm-~~ 429 (480)
T PLN02555 359 FVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGE----AE----NKLITREEVAECLLEAT-VG 429 (480)
T ss_pred EEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCc----cc----cCcCcHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999988889999995311 00 11379999999999999 84
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036598 155 GEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQ 196 (212)
Q Consensus 155 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~ 196 (212)
++++++|+||++|++++++++++||||..++.+||+++.+.
T Consensus 430 -~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 430 -EKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred -chHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999999999765
No 8
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.7e-37 Score=275.49 Aligned_cols=181 Identities=34% Similarity=0.686 Sum_probs=162.3
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG 80 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG 80 (212)
|||||||+..++.+++.+++.+| .+.+|+|++.....+.+|+++.++..+.|+.+.+|+||..||+|+++++||||||
T Consensus 267 vyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcG 344 (449)
T PLN02173 267 VYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCG 344 (449)
T ss_pred EEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCc
Confidence 79999999999999999999999 7788999998644345788887777677888889999999999999999999999
Q ss_pred hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHH
Q 036598 81 WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEG 160 (212)
Q Consensus 81 ~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 160 (212)
|||++|++.+|||||++|+++||+.||+++++.+|+|+.+...+ ....+++++|.++++++| .+ ++++.
T Consensus 345 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~---------~~~~~~~e~v~~av~~vm-~~-~~~~~ 413 (449)
T PLN02173 345 WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEK---------ESGIAKREEIEFSIKEVM-EG-EKSKE 413 (449)
T ss_pred cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecc---------cCCcccHHHHHHHHHHHh-cC-ChHHH
Confidence 99999999999999999999999999999988889999986432 012369999999999999 85 66899
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036598 161 MRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLL 194 (212)
Q Consensus 161 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~ 194 (212)
+|+||+++++++++++.+||||..++.+|++++.
T Consensus 414 ~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 414 MKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999975
No 9
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.6e-37 Score=278.55 Aligned_cols=187 Identities=37% Similarity=0.635 Sum_probs=158.1
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc--------------ccccchhHHHhhcCCCeEEeeccChhhh
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA--------------FLLLDKDFEERVKDRGLIIKGWAPQVLI 66 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~--------------~~~lp~~~~~~~~~~~~~~~~~~p~~~i 66 (212)
|||||||+..++.+++.+++.+|+.++++|||+++... .+.+|+++.++.... ..+.+|+||.+|
T Consensus 277 vyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~-g~v~~W~PQ~~i 355 (481)
T PLN02554 277 VFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDI-GKVIGWAPQVAV 355 (481)
T ss_pred EEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccC-ceEEeeCCHHHH
Confidence 79999999999999999999999999999999997521 123688877766544 466799999999
Q ss_pred cCCCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHH
Q 036598 67 LNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKV 146 (212)
Q Consensus 67 l~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 146 (212)
|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.+|+|+.+.... ..+...+ ....+++++|.++
T Consensus 356 L~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~-~~~~~~~-~~~~~~~e~l~~a 433 (481)
T PLN02554 356 LAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYW-RGDLLAG-EMETVTAEEIERG 433 (481)
T ss_pred hCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccc-ccccccc-ccCeEcHHHHHHH
Confidence 9999999999999999999999999999999999999999976558889999986310 0000000 0123799999999
Q ss_pred HHHHhhc-CccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036598 147 VYQFMIN-GGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLN 195 (212)
Q Consensus 147 i~~vl~~-~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~ 195 (212)
|+++| . | ++||+||+++++++++++++||+++.++.+||+++.+
T Consensus 434 v~~vm-~~~----~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 434 IRCLM-EQD----SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HHHHh-cCC----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Confidence 99999 7 4 8999999999999999999999999999999999865
No 10
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=8.2e-37 Score=275.50 Aligned_cols=182 Identities=39% Similarity=0.740 Sum_probs=163.8
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-----ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccce
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-----FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-----~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~ 75 (212)
|||||||+..++.+++.+++.+|+.++++|||+++... ...+|+++.++....|+.+.+|+||.++|+|++++.|
T Consensus 286 VyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~f 365 (477)
T PLN02863 286 VYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAF 365 (477)
T ss_pred EEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeE
Confidence 79999999999999999999999999999999998532 1358888888888889988899999999999999999
Q ss_pred eecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
||||||||++|++++|||+|++|+++||+.||+++++.+|+|+.+.... ....+++++.++++++| .+
T Consensus 366 vtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~----------~~~~~~~~v~~~v~~~m-~~- 433 (477)
T PLN02863 366 LTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA----------DTVPDSDELARVFMESV-SE- 433 (477)
T ss_pred EecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC----------CCCcCHHHHHHHHHHHh-hc-
Confidence 9999999999999999999999999999999999878899999985322 12368899999999998 52
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036598 156 EEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQ 196 (212)
Q Consensus 156 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~ 196 (212)
+++||+||+++++++++++.+||||..++++||+++...
T Consensus 434 --~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 434 --NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred --cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 489999999999999999999999999999999998754
No 11
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=8.1e-37 Score=276.40 Aligned_cols=188 Identities=51% Similarity=0.893 Sum_probs=164.1
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-----ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccce
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-----FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-----~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~ 75 (212)
|||||||+..++.+++.+++.+|+.++++|||+++... ...+|+++.++..+.|+.+.+|+||.+||+|+++++|
T Consensus 288 vyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~f 367 (482)
T PLN03007 288 IYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGF 367 (482)
T ss_pred EEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCcccee
Confidence 79999999999999999999999999999999998642 1358888888888899999999999999999999999
Q ss_pred eecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
||||||||++|++++|||||++|+++||+.||+++++.+++|+.+...... +. ....+++++|.++|+++| .|
T Consensus 368 vtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~-~~----~~~~~~~~~l~~av~~~m-~~- 440 (482)
T PLN03007 368 VTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLV-KV----KGDFISREKVEKAVREVI-VG- 440 (482)
T ss_pred eecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccc-cc----ccCcccHHHHHHHHHHHh-cC-
Confidence 999999999999999999999999999999999987766777776421100 00 012379999999999999 85
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036598 156 EEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLN 195 (212)
Q Consensus 156 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~ 195 (212)
+++++||+||+++++.+++++.+||||+.++.+||+++..
T Consensus 441 ~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 441 EEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNS 480 (482)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999999999874
No 12
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.1e-36 Score=273.55 Aligned_cols=184 Identities=32% Similarity=0.596 Sum_probs=157.5
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG 80 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG 80 (212)
|||||||....+.+++.+++.+|+..+++|||+++.......++.+.+.....+..+.+|+||.+||+|+++++||||||
T Consensus 272 vyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G 351 (456)
T PLN02210 272 VYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCG 351 (456)
T ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCC
Confidence 79999999999999999999999999999999998543112233444444223335679999999999999999999999
Q ss_pred hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHH
Q 036598 81 WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEG 160 (212)
Q Consensus 81 ~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 160 (212)
|||++|++++|||+|++|+++||+.||+++++.+|+|+.+...+ . ...+++++|+++|+++| .+ +++++
T Consensus 352 ~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~----~-----~~~~~~~~l~~av~~~m-~~-~~g~~ 420 (456)
T PLN02210 352 WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA----V-----DGELKVEEVERCIEAVT-EG-PAAAD 420 (456)
T ss_pred cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc----c-----CCcCCHHHHHHHHHHHh-cC-chHHH
Confidence 99999999999999999999999999999977689999986421 0 11389999999999999 85 66889
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036598 161 MRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLN 195 (212)
Q Consensus 161 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~ 195 (212)
+|+||++|++.+++++++||||..++.+||+++..
T Consensus 421 ~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 421 IRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999863
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-36 Score=274.72 Aligned_cols=186 Identities=41% Similarity=0.769 Sum_probs=160.8
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc------ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA------FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGG 74 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~------~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~ 74 (212)
|||||||+..++.+++.+++.+|+.++++|||+++... ...+|+++.+++...+ .+.+|+||..||+|++++.
T Consensus 283 vyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg-~v~~w~PQ~~iL~h~~vg~ 361 (475)
T PLN02167 283 VFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRG-LVCGWAPQVEILAHKAIGG 361 (475)
T ss_pred EEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCe-eeeccCCHHHHhcCcccCe
Confidence 79999999999999999999999999999999998532 1248888887776665 5669999999999999999
Q ss_pred eeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 75 FMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|||||||||++|++++|||||++|+++||+.||+++++.+|+|+.+.... | .+ ....+++++|.++|+++| .+
T Consensus 362 fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~---~-~~--~~~~~~~~~l~~av~~~m-~~ 434 (475)
T PLN02167 362 FVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY---V-SA--YGEIVKADEIAGAVRSLM-DG 434 (475)
T ss_pred EEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc---c-cc--cCCcccHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999988668899999985421 0 00 011379999999999999 75
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 155 GEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 155 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
+ +.||+|++++++++++++.+||||..++.+||+++..++
T Consensus 435 ~---~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 435 E---DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred C---HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 2 489999999999999999999999999999999988764
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.5e-36 Score=271.61 Aligned_cols=168 Identities=43% Similarity=0.837 Sum_probs=153.4
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc--------cc-ccchhHHHhhcCCCeEEeeccChhhhcCCCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA--------FL-LLDKDFEERVKDRGLIIKGWAPQVLILNHPA 71 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~--------~~-~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~ 71 (212)
|||||||+..++.+++.+++.+|+.++++|||++.... .. .+|+++.++....|+.+.+|+||..||+|++
T Consensus 273 vyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~ 352 (451)
T PLN03004 273 VFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKA 352 (451)
T ss_pred EEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCc
Confidence 79999999999999999999999999999999998531 12 3888999999999999999999999999999
Q ss_pred ccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 72 VGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
++.||||||+||++|++++|||+|++|+++||+.||+++++.+|+|+.+...+ ...+++++|.++|+++|
T Consensus 353 v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~----------~~~~~~e~l~~av~~vm 422 (451)
T PLN03004 353 VGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESE----------TGFVSSTEVEKRVQEII 422 (451)
T ss_pred cceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCc----------CCccCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999977789999996431 11379999999999999
Q ss_pred hcCccchHHHHHHHHHHHHHHHHHHhcCCchH
Q 036598 152 INGGEEVEGMRKRARKLSELAKIAVSKGGSSY 183 (212)
Q Consensus 152 ~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 183 (212)
.| ++|++|++++++++++++++||||+
T Consensus 423 -~~----~~~r~~a~~~~~~a~~Av~~GGSS~ 449 (451)
T PLN03004 423 -GE----CPVRERTMAMKNAAELALTETGSSH 449 (451)
T ss_pred -cC----HHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 87 8999999999999999999999986
No 15
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=5.9e-36 Score=267.49 Aligned_cols=184 Identities=28% Similarity=0.450 Sum_probs=164.0
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-----ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccce
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-----FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-----~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~ 75 (212)
|||||||+..++.+++.+++.+|+..+.+|+|++.... ...+|+++.++..+.++.+.+|+||..||+|++++.|
T Consensus 260 vyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~F 339 (453)
T PLN02764 260 VFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCF 339 (453)
T ss_pred EEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeE
Confidence 79999999999999999999999999999999998531 2468999998888889989899999999999999999
Q ss_pred eecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
||||||||++|++++|||+|++|+++||+.||+++++.+|+|+.+...+ ...+++++|+++++++| +++
T Consensus 340 vtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~----------~~~~~~e~i~~av~~vm-~~~ 408 (453)
T PLN02764 340 VSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE----------TGWFSKESLRDAINSVM-KRD 408 (453)
T ss_pred EecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc----------CCccCHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999977789998875321 01379999999999999 865
Q ss_pred -cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhh
Q 036598 156 -EEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQKVE 199 (212)
Q Consensus 156 -~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~~~ 199 (212)
++++.+|+|+++++++++ ++|||..++.+||+++.+..+.
T Consensus 409 ~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~~ 449 (453)
T PLN02764 409 SEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDLVSG 449 (453)
T ss_pred chhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhccc
Confidence 678899999999999885 5899999999999999877543
No 16
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=6.5e-36 Score=267.88 Aligned_cols=179 Identities=34% Similarity=0.579 Sum_probs=155.7
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc---------c-c--ccchhHHHhhcCCCeEEeeccChhhhcC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA---------F-L--LLDKDFEERVKDRGLIIKGWAPQVLILN 68 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~---------~-~--~lp~~~~~~~~~~~~~~~~~~p~~~il~ 68 (212)
|||||||+..++.+++.+++.+|+.++.+|||++.... . . .+|+++.++... +..+.+|+||..||+
T Consensus 264 vyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~-~g~v~~W~PQ~~iL~ 342 (455)
T PLN02152 264 IYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEE-VGMIVSWCSQIEVLR 342 (455)
T ss_pred EEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccC-CeEEEeeCCHHHHhC
Confidence 79999999999999999999999999999999998531 0 1 135666665544 456779999999999
Q ss_pred CCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 69 HPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 69 ~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
|+++++||||||+||++|++++|||+|++|+++||+.||+++++.+|+|+.+..++ ...+++++|+++++
T Consensus 343 h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~----------~~~~~~e~l~~av~ 412 (455)
T PLN02152 343 HRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENS----------EGLVERGEIRRCLE 412 (455)
T ss_pred CcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCc----------CCcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988778888875422 12369999999999
Q ss_pred HHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036598 149 QFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDL 193 (212)
Q Consensus 149 ~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l 193 (212)
++| +| .+..||+||+++++++++++.+||+|+.++.+||+++
T Consensus 413 ~vm-~~--~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 413 AVM-EE--KSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHH-hh--hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 999 64 4568999999999999999999999999999999986
No 17
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=8.2e-36 Score=266.74 Aligned_cols=181 Identities=27% Similarity=0.471 Sum_probs=159.9
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-----ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccce
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-----FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-----~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~ 75 (212)
|||||||+..++.+++.+++.+++..+.+++|...... ...+|+++.+++...|+.+.+|+||.+||+|+++++|
T Consensus 254 vyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~F 333 (442)
T PLN02208 254 VFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCF 333 (442)
T ss_pred EEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeE
Confidence 79999999999999999999988878888888887531 2468999988888899999899999999999999999
Q ss_pred eecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
||||||||++|++++|||+|++|+++||+.||+++++.+|+|+.+...+ ...+++++|.++|+++| +++
T Consensus 334 vtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~----------~~~~~~~~l~~ai~~~m-~~~ 402 (442)
T PLN02208 334 VNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK----------TGWFSKESLSNAIKSVM-DKD 402 (442)
T ss_pred EccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc----------CCcCcHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999877789999996432 12489999999999999 865
Q ss_pred -cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036598 156 -EEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQ 196 (212)
Q Consensus 156 -~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~ 196 (212)
++++.+|+|++++++++. ++|+|..++.+||+++.+.
T Consensus 403 ~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 403 SDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred chhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 678999999999999974 3789999999999998653
No 18
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=7.7e-36 Score=267.63 Aligned_cols=171 Identities=35% Similarity=0.602 Sum_probs=152.5
Q ss_pred CEEeeCCCC-CCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecC
Q 036598 1 LYVCFGSLC-EFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHC 79 (212)
Q Consensus 1 V~vs~GS~~-~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hg 79 (212)
|||||||+. .++.+++.+++.+|+.++++|||++.......+|+++.++.. .|+.+.+|+||.+||+|+++++|||||
T Consensus 276 vyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~ 354 (448)
T PLN02562 276 IYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHC 354 (448)
T ss_pred EEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecC
Confidence 799999987 578899999999999999999999975433357877766553 566778999999999999999999999
Q ss_pred ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchH
Q 036598 80 GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVE 159 (212)
Q Consensus 80 G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~ 159 (212)
||||++|++++|||+|++|+++||+.||+++++.+|+|+.+. + +++++|.++|+++| .| +
T Consensus 355 G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~-------------~~~~~l~~~v~~~l-~~----~ 414 (448)
T PLN02562 355 GWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--G-------------FGQKEVEEGLRKVM-ED----S 414 (448)
T ss_pred cchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--C-------------CCHHHHHHHHHHHh-CC----H
Confidence 999999999999999999999999999999977679998873 2 78999999999999 87 8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036598 160 GMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDL 193 (212)
Q Consensus 160 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l 193 (212)
+||+||++++++++++ .+||||+.|+.+||+++
T Consensus 415 ~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 415 GMGERLMKLRERAMGE-EARLRSMMNFTTLKDEL 447 (448)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHh
Confidence 9999999999999876 66799999999999986
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-35 Score=267.31 Aligned_cols=181 Identities=41% Similarity=0.713 Sum_probs=156.8
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG 80 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG 80 (212)
|||||||....+.+++.+++.+|+..++.|||++.... .++.+.. ..|..+.+|+||..||+|+++++||||||
T Consensus 277 vyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~-----~~~~~~~-~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG 350 (459)
T PLN02448 277 LYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEA-----SRLKEIC-GDMGLVVPWCDQLKVLCHSSVGGFWTHCG 350 (459)
T ss_pred EEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCch-----hhHhHhc-cCCEEEeccCCHHHHhccCccceEEecCc
Confidence 79999999988899999999999999999999876431 2233222 24567789999999999999999999999
Q ss_pred hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc-cchH
Q 036598 81 WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG-EEVE 159 (212)
Q Consensus 81 ~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~ 159 (212)
+||+.|++++|||||++|+++||+.||+++++.+|+|+.+.... . ....+++++|+++++++| .++ ++++
T Consensus 351 ~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~-----~---~~~~~~~~~l~~av~~vl-~~~~~~~~ 421 (459)
T PLN02448 351 WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV-----G---EETLVGREEIAELVKRFM-DLESEEGK 421 (459)
T ss_pred hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc-----c---cCCcCcHHHHHHHHHHHh-cCCchhHH
Confidence 99999999999999999999999999999977789999985321 0 012379999999999999 864 7899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036598 160 GMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQ 196 (212)
Q Consensus 160 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~ 196 (212)
+||+||+++++++++++.+||||..++.+||+++.+.
T Consensus 422 ~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 422 EMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999998754
No 20
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=5.8e-35 Score=261.56 Aligned_cols=182 Identities=29% Similarity=0.484 Sum_probs=159.8
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-----ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccce
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-----FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-----~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~ 75 (212)
|||||||...++.+++.+++.+|+..+.+|+|++.... .+.+|+++.+++...++.+.+|+||..||+|++++.|
T Consensus 255 vyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~f 334 (446)
T PLN00414 255 VFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCF 334 (446)
T ss_pred EEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceE
Confidence 79999999999999999999999999999999998631 2368999999888889888899999999999999999
Q ss_pred eecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
||||||||++|++++|||+|++|++.||+.||+++++.+|+|+.+...+ ...+++++|+++++++| .++
T Consensus 335 vtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~----------~~~~~~~~i~~~v~~~m-~~~ 403 (446)
T PLN00414 335 VNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED----------SGWFSKESLRDTVKSVM-DKD 403 (446)
T ss_pred EecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc----------CCccCHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999987889999995421 11389999999999999 764
Q ss_pred -cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 156 -EEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 156 -~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
+.++.+|+|++++++.+. ++||++. .+.+||+++....
T Consensus 404 ~e~g~~~r~~a~~~~~~~~---~~gg~ss-~l~~~v~~~~~~~ 442 (446)
T PLN00414 404 SEIGNLVKRNHKKLKETLV---SPGLLSG-YADKFVEALENEV 442 (446)
T ss_pred hhhHHHHHHHHHHHHHHHH---cCCCcHH-HHHHHHHHHHHhc
Confidence 578899999999999975 6688343 3899999986543
No 21
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=3e-34 Score=257.99 Aligned_cols=181 Identities=35% Similarity=0.606 Sum_probs=155.9
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc------ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA------FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGG 74 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~------~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~ 74 (212)
|||||||+..++.+++.+++.+|+.++++|||++.... ...+|+++.+++...++.+.+|+||..||+|+++++
T Consensus 281 vyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~ 360 (472)
T PLN02670 281 VYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGG 360 (472)
T ss_pred EEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccce
Confidence 79999999999999999999999999999999998531 135899998888888898899999999999999999
Q ss_pred eeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 75 FMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|||||||||++|++++|||||++|+++||+.||+++ +.+|+|+.+...+ ....+++++|.++|+++| .|
T Consensus 361 FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v-~~~g~Gv~l~~~~---------~~~~~~~e~i~~av~~vm-~~ 429 (472)
T PLN02670 361 FLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVPRDE---------RDGSFTSDSVAESVRLAM-VD 429 (472)
T ss_pred eeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH-HHcCeeEEeeccc---------cCCcCcHHHHHHHHHHHh-cC
Confidence 999999999999999999999999999999999999 5579999996421 012379999999999999 85
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 155 GEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 155 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
++|++||+||+++++.++. .+.....+++|++.+....
T Consensus 430 -~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 430 -DAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRENR 467 (472)
T ss_pred -cchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHhc
Confidence 6678999999999999883 3334456777777776554
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=8.3e-35 Score=263.81 Aligned_cols=180 Identities=27% Similarity=0.407 Sum_probs=121.5
Q ss_pred CEEeeCCCCCCCHHH-HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecC
Q 036598 1 LYVCFGSLCEFAESQ-LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHC 79 (212)
Q Consensus 1 V~vs~GS~~~~~~~~-~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hg 79 (212)
|||||||+....++. +..++.++++.+.+|||++.......+ ++|+.+.+|+||.++|+||++++|||||
T Consensus 279 v~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~l---------~~n~~~~~W~PQ~~lL~hp~v~~fitHg 349 (500)
T PF00201_consen 279 VYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPENL---------PKNVLIVKWLPQNDLLAHPRVKLFITHG 349 (500)
T ss_dssp EEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGCHH---------HTTEEEESS--HHHHHTSTTEEEEEES-
T ss_pred EEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccccc---------cceEEEeccccchhhhhcccceeeeecc
Confidence 799999998644444 788999999999999999887432222 3678999999999999999999999999
Q ss_pred ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchH
Q 036598 80 GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVE 159 (212)
Q Consensus 80 G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~ 159 (212)
|+||++||+++|||+|++|+++||+.||.++ ++.|+|+.++..+ ++.++|.++|+++| +| +
T Consensus 350 G~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G~g~~l~~~~-------------~~~~~l~~ai~~vl-~~----~ 410 (500)
T PF00201_consen 350 GLNSTQEALYHGVPMLGIPLFGDQPRNAARV-EEKGVGVVLDKND-------------LTEEELRAAIREVL-EN----P 410 (500)
T ss_dssp -HHHHHHHHHCT--EEE-GCSTTHHHHHHHH-HHTTSEEEEGGGC--------------SHHHHHHHHHHHH-HS----H
T ss_pred ccchhhhhhhccCCccCCCCcccCCccceEE-EEEeeEEEEEecC-------------CcHHHHHHHHHHHH-hh----h
Confidence 9999999999999999999999999999999 5579999998776 89999999999999 98 8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhh---hhhccccccccc
Q 036598 160 GMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQKVE---RLSKKKETVDQF 211 (212)
Q Consensus 160 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~~~---~~~~~~~~~~~~ 211 (212)
+|++||+++++.++.. ..++...+...+|.+.+++.. +....+.+|+||
T Consensus 411 ~y~~~a~~ls~~~~~~---p~~p~~~~~~~ie~v~~~~~~~~l~~~~~~l~~~~~ 462 (500)
T PF00201_consen 411 SYKENAKRLSSLFRDR---PISPLERAVWWIEYVARHGGAPHLRSPARDLSFYQY 462 (500)
T ss_dssp HHHHHHHHHHHTTT-----------------------------------------
T ss_pred HHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHHHhcCCCcccCChhhcCCHHHH
Confidence 9999999999999944 556667788888888887554 445667889988
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=8.9e-33 Score=251.15 Aligned_cols=181 Identities=19% Similarity=0.342 Sum_probs=157.4
Q ss_pred CEEeeCCCCC---CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceee
Q 036598 1 LYVCFGSLCE---FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMT 77 (212)
Q Consensus 1 V~vs~GS~~~---~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~ 77 (212)
|||||||+.. .+.+.+..+++++++.+++|||+++.... + ...++|+.+.+|+||.++|+||++++|||
T Consensus 299 V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~---~-----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fIt 370 (507)
T PHA03392 299 VYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE---A-----INLPANVLTQKWFPQRAVLKHKNVKAFVT 370 (507)
T ss_pred EEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC---c-----ccCCCceEEecCCCHHHHhcCCCCCEEEe
Confidence 7999999864 56778899999999999999999875431 1 11357899999999999999999999999
Q ss_pred cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccc
Q 036598 78 HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEE 157 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 157 (212)
|||+||++||+++|||+|++|+++||+.||+++ +++|+|+.++..+ ++.++|.++++++| +|
T Consensus 371 HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~~~-------------~t~~~l~~ai~~vl-~~--- 432 (507)
T PHA03392 371 QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDTVT-------------VSAAQLVLAIVDVI-EN--- 432 (507)
T ss_pred cCCcccHHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEeccCC-------------cCHHHHHHHHHHHh-CC---
Confidence 999999999999999999999999999999999 5679999998765 89999999999999 98
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh-hh---hhhccccccccc
Q 036598 158 VEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK-VE---RLSKKKETVDQF 211 (212)
Q Consensus 158 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~-~~---~~~~~~~~~~~~ 211 (212)
++|++||+++++.++ .++.+....+...+|.+.+++ .. +....+-+|+||
T Consensus 433 -~~y~~~a~~ls~~~~---~~p~~~~~~av~~iE~v~r~~~g~~~lr~~~~~l~~~qy 486 (507)
T PHA03392 433 -PKYRKNLKELRHLIR---HQPMTPLHKAIWYTEHVIRNKHGNTSLKTKAANVSYSDY 486 (507)
T ss_pred -HHHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHhCCCCcccccccccCCCHHHH
Confidence 999999999999999 446566778889999998887 43 445667888887
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.96 E-value=1.4e-28 Score=222.55 Aligned_cols=186 Identities=29% Similarity=0.534 Sum_probs=145.9
Q ss_pred CEEeeCCCC---CCCHHHHHHHHHHHhhC-CceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhh-cCCCCccce
Q 036598 1 LYVCFGSLC---EFAESQLLEIALGLESS-NICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLI-LNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~---~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~i-l~~~~~~~~ 75 (212)
|||||||+. .++.+...+++.++++. ++.|+|++.......+++++.++ ...|+...+|+||.++ |+|+++++|
T Consensus 280 vyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~F 358 (496)
T KOG1192|consen 280 VYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGF 358 (496)
T ss_pred EEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEE
Confidence 799999999 69999999999999998 88999999875422233333221 2357778899999998 699999999
Q ss_pred eecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
|||||+||++|++++|||+|++|+++||+.||++++++ |.|..+...+ .+...+..++.+++ ++
T Consensus 359 vTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~-g~~~v~~~~~-------------~~~~~~~~~~~~il-~~- 422 (496)
T KOG1192|consen 359 VTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRH-GGGGVLDKRD-------------LVSEELLEAIKEIL-EN- 422 (496)
T ss_pred EECCcccHHHHHHhcCCceecCCccccchhHHHHHHhC-CCEEEEehhh-------------cCcHHHHHHHHHHH-cC-
Confidence 99999999999999999999999999999999999665 6665565544 45555999999999 98
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh---hhhhhccccccccc
Q 036598 156 EEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK---VERLSKKKETVDQF 211 (212)
Q Consensus 156 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~---~~~~~~~~~~~~~~ 211 (212)
++|+++++++++..+ ....+. ..+...++...++. ..+.. .+.++.||
T Consensus 423 ---~~y~~~~~~l~~~~~---~~p~~~-~~~~~~~e~~~~~~~~~~l~~~-~~~~~~~~ 473 (496)
T KOG1192|consen 423 ---EEYKEAAKRLSEILR---DQPISP-ELAVKWVEFVARHGGAKHLKEA-AHLSFIEY 473 (496)
T ss_pred ---hHHHHHHHHHHHHHH---cCCCCH-HHHHHHHHHHHhcCCCcccCcc-ccCChhhh
Confidence 899999999999998 557776 66665555555543 22222 45555554
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.93 E-value=1.9e-25 Score=198.31 Aligned_cols=163 Identities=21% Similarity=0.332 Sum_probs=141.7
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG 80 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG 80 (212)
|||||||.... .+.+..+++++..++.+||...+.... .+ ...+.|+.+.+|+||..++.++++ ||||||
T Consensus 240 vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~~-~~------~~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG 309 (406)
T COG1819 240 VYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGARD-TL------VNVPDNVIVADYVPQLELLPRADA--VIHHGG 309 (406)
T ss_pred EEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccccc-cc------ccCCCceEEecCCCHHHHhhhcCE--EEecCC
Confidence 69999999976 667777889999999999999876211 11 123578999999999999999888 999999
Q ss_pred hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHH
Q 036598 81 WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEG 160 (212)
Q Consensus 81 ~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 160 (212)
+||++|||++|||+|++|...||+.||.++ ++.|+|+.+..++ ++.+.++++|.++| +| +.
T Consensus 310 ~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~~~-------------l~~~~l~~av~~vL-~~----~~ 370 (406)
T COG1819 310 AGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPFEE-------------LTEERLRAAVNEVL-AD----DS 370 (406)
T ss_pred cchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCccc-------------CCHHHHHHHHHHHh-cC----HH
Confidence 999999999999999999999999999999 7789999998766 89999999999999 99 99
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 161 MRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 161 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
|+++++++++.++ ..+| ...+.++|+++...+
T Consensus 371 ~~~~~~~~~~~~~---~~~g--~~~~a~~le~~~~~~ 402 (406)
T COG1819 371 YRRAAERLAEEFK---EEDG--PAKAADLLEEFAREK 402 (406)
T ss_pred HHHHHHHHHHHhh---hccc--HHHHHHHHHHHHhcc
Confidence 9999999999999 4466 456889998876543
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.92 E-value=1.1e-23 Score=185.79 Aligned_cols=163 Identities=20% Similarity=0.332 Sum_probs=136.4
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG 80 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG 80 (212)
|||||||+....+..+..+++++...+++++|..+..... +.+. ..++|+.+.+|+|+.++|.++++ +|||||
T Consensus 228 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~---~~~~--~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG 300 (392)
T TIGR01426 228 VLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP---ADLG--ELPPNVEVRQWVPQLEILKKADA--FITHGG 300 (392)
T ss_pred EEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh---hHhc--cCCCCeEEeCCCCHHHHHhhCCE--EEECCC
Confidence 6999999877677778889999999999999988764310 1111 12467889999999999988887 999999
Q ss_pred hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHH
Q 036598 81 WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEG 160 (212)
Q Consensus 81 ~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 160 (212)
+||+.|++++|+|+|++|...||+.|++++ +++|+|+.+...+ +++++|.+++.++| +| ++
T Consensus 301 ~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l-~~~g~g~~l~~~~-------------~~~~~l~~ai~~~l-~~----~~ 361 (392)
T TIGR01426 301 MNSTMEALFNGVPMVAVPQGADQPMTARRI-AELGLGRHLPPEE-------------VTAEKLREAVLAVL-SD----PR 361 (392)
T ss_pred chHHHHHHHhCCCEEecCCcccHHHHHHHH-HHCCCEEEecccc-------------CCHHHHHHHHHHHh-cC----HH
Confidence 999999999999999999999999999999 6679999987655 88999999999999 98 88
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036598 161 MRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLL 194 (212)
Q Consensus 161 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~ 194 (212)
++++++++++.++ ..+|. ..+.++|+++.
T Consensus 362 ~~~~~~~l~~~~~---~~~~~--~~aa~~i~~~~ 390 (392)
T TIGR01426 362 YAERLRKMRAEIR---EAGGA--RRAADEIEGFL 390 (392)
T ss_pred HHHHHHHHHHHHH---HcCCH--HHHHHHHHHhh
Confidence 9999999999998 33554 45778877753
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.91 E-value=1.4e-23 Score=185.09 Aligned_cols=158 Identities=16% Similarity=0.230 Sum_probs=127.1
Q ss_pred CEEeeCCCCCCCHH-HHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecC
Q 036598 1 LYVCFGSLCEFAES-QLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHC 79 (212)
Q Consensus 1 V~vs~GS~~~~~~~-~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hg 79 (212)
|||+|||+.....+ ....+++++...+.+++|.++...... ...++|+.+.+|+|+..+|.++++ |||||
T Consensus 242 v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~-------~~~~~~v~~~~~~p~~~ll~~~d~--~I~hg 312 (401)
T cd03784 242 VYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA-------EDLPDNVRVVDFVPHDWLLPRCAA--VVHHG 312 (401)
T ss_pred EEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc-------cCCCCceEEeCCCCHHHHhhhhhe--eeecC
Confidence 79999999875554 466678888888999999988654111 123578999999999999988777 99999
Q ss_pred ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchH
Q 036598 80 GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVE 159 (212)
Q Consensus 80 G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~ 159 (212)
|+||++|++++|+|+|++|+..||+.||+++ +++|+|+.+...+ ++.++|.+++++++ ++
T Consensus 313 G~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l~~~~-------------~~~~~l~~al~~~l-~~----- 372 (401)
T cd03784 313 GAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPALDPRE-------------LTAERLAAALRRLL-DP----- 372 (401)
T ss_pred CchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHCCCCCCCCccc-------------CCHHHHHHHHHHHh-CH-----
Confidence 9999999999999999999999999999999 6679999997654 79999999999999 75
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036598 160 GMRKRARKLSELAKIAVSKGGSSYVNVGLLIDD 192 (212)
Q Consensus 160 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~ 192 (212)
.+++++++..+.++ ..+|. ..+.++|++
T Consensus 373 ~~~~~~~~~~~~~~---~~~g~--~~~~~~ie~ 400 (401)
T cd03784 373 PSRRRAAALLRRIR---EEDGV--PSAADVIER 400 (401)
T ss_pred HHHHHHHHHHHHHH---hccCH--HHHHHHHhh
Confidence 45566666666665 23443 446677664
No 28
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.63 E-value=2.4e-15 Score=131.38 Aligned_cols=148 Identities=18% Similarity=0.298 Sum_probs=114.1
Q ss_pred CEEeeCCCCCCCHHH-HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCC-eEEeeccChh-hhcCCCCccceee
Q 036598 1 LYVCFGSLCEFAESQ-LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRG-LIIKGWAPQV-LILNHPAVGGFMT 77 (212)
Q Consensus 1 V~vs~GS~~~~~~~~-~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~-~~~~~~~p~~-~il~~~~~~~~v~ 77 (212)
|+|..||++....+. +..++..+.+ +++|++..|.+.. +.........+ +.+.+|.+++ .+++.+++ +||
T Consensus 186 ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~----~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIs 258 (357)
T COG0707 186 ILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL----EELKSAYNELGVVRVLPFIDDMAALLAAADL--VIS 258 (357)
T ss_pred EEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH----HHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEe
Confidence 578999999844444 4445555544 6899999887641 22222222333 7778888875 47877777 999
Q ss_pred cCChhhHHHHHHcCCCeeccCcc----cchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhc
Q 036598 78 HCGWNSVLESVSSGVPMITWPLF----AEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMIN 153 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~iP~~----~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 153 (212)
++|++|+.|+++.|+|+|.+|+. .||..||..+ ++.|.|+.++..+ ++.+.+.+.|.+++ +
T Consensus 259 RaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~~~-------------lt~~~l~~~i~~l~-~ 323 (357)
T COG0707 259 RAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQSE-------------LTPEKLAELILRLL-S 323 (357)
T ss_pred CCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEecccc-------------CCHHHHHHHHHHHh-c
Confidence 99999999999999999999983 3899999999 5569999998876 99999999999999 8
Q ss_pred CccchHHHHHHHHHHHH
Q 036598 154 GGEEVEGMRKRARKLSE 170 (212)
Q Consensus 154 ~~~~~~~~~~~a~~l~~ 170 (212)
++++.+.|+++++++..
T Consensus 324 ~~~~l~~m~~~a~~~~~ 340 (357)
T COG0707 324 NPEKLKAMAENAKKLGK 340 (357)
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 76777777777766543
No 29
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.62 E-value=1.7e-17 Score=130.07 Aligned_cols=135 Identities=16% Similarity=0.210 Sum_probs=94.9
Q ss_pred CEEeeCCCCCCCHHH-HHHHHHHHhh--CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC-hhhhcCCCCcccee
Q 036598 1 LYVCFGSLCEFAESQ-LLEIALGLES--SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP-QVLILNHPAVGGFM 76 (212)
Q Consensus 1 V~vs~GS~~~~~~~~-~~~~~~~l~~--~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-~~~il~~~~~~~~v 76 (212)
|+|+.||........ +..++..+.. ...+|++.+|..........+. ....++.+.+|.+ ...++..+++ +|
T Consensus 2 ilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~--~~~~~v~~~~~~~~m~~~m~~aDl--vI 77 (167)
T PF04101_consen 2 ILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVE--NFNPNVKVFGFVDNMAELMAAADL--VI 77 (167)
T ss_dssp EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHC--CTTCCCEEECSSSSHHHHHHHHSE--EE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHh--ccCCcEEEEechhhHHHHHHHcCE--EE
Confidence 689999887632222 2223333332 2588999999765221111111 1126788889999 5678888887 99
Q ss_pred ecCChhhHHHHHHcCCCeeccCccc----chhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh
Q 036598 77 THCGWNSVLESVSSGVPMITWPLFA----EQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI 152 (212)
Q Consensus 77 ~hgG~~sv~eal~~GvP~i~iP~~~----DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 152 (212)
||||++|++|++.+|+|+|++|... +|..|+..+ ++.|+|+.+.... .+.+.|.++|.+++
T Consensus 78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~~~~-------------~~~~~L~~~i~~l~- 142 (167)
T PF04101_consen 78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLDESE-------------LNPEELAEAIEELL- 142 (167)
T ss_dssp ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSECCC--------------SCCCHHHHHHCHC-
T ss_pred eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccCccc-------------CCHHHHHHHHHHHH-
Confidence 9999999999999999999999987 999999999 5569999997655 66788999999998
Q ss_pred cC
Q 036598 153 NG 154 (212)
Q Consensus 153 ~~ 154 (212)
.+
T Consensus 143 ~~ 144 (167)
T PF04101_consen 143 SD 144 (167)
T ss_dssp CC
T ss_pred cC
Confidence 77
No 30
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.56 E-value=8.1e-14 Score=121.89 Aligned_cols=130 Identities=18% Similarity=0.173 Sum_probs=98.3
Q ss_pred CEEeeCCCCCCCHHH-HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-Ch-hhhcCCCCccceee
Q 036598 1 LYVCFGSLCEFAESQ-LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-PQ-VLILNHPAVGGFMT 77 (212)
Q Consensus 1 V~vs~GS~~~~~~~~-~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-p~-~~il~~~~~~~~v~ 77 (212)
|+|..||++....+. +..++..+. .+++|+|.+|.+. +.+.. .. ..++.+.+|+ ++ ..+++++++ +||
T Consensus 188 iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~---~~~~~-~~--~~~~~~~~f~~~~m~~~~~~adl--vIs 258 (352)
T PRK12446 188 ITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN---LDDSL-QN--KEGYRQFEYVHGELPDILAITDF--VIS 258 (352)
T ss_pred EEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch---HHHHH-hh--cCCcEEecchhhhHHHHHHhCCE--EEE
Confidence 578899999855544 444455553 3589999999753 11111 11 1244555777 44 468888887 999
Q ss_pred cCChhhHHHHHHcCCCeeccCcc-----cchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh
Q 036598 78 HCGWNSVLESVSSGVPMITWPLF-----AEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI 152 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~iP~~-----~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 152 (212)
|||++|+.|++++|+|+|++|+. .||..||..+ ++.|+|..+..++ ++++.+.+++.+++
T Consensus 259 r~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~~~~-------------~~~~~l~~~l~~ll- 323 (352)
T PRK12446 259 RAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLYEED-------------VTVNSLIKHVEELS- 323 (352)
T ss_pred CCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcchhc-------------CCHHHHHHHHHHHH-
Confidence 99999999999999999999984 4899999999 5579999997655 89999999999999
Q ss_pred cC
Q 036598 153 NG 154 (212)
Q Consensus 153 ~~ 154 (212)
+|
T Consensus 324 ~~ 325 (352)
T PRK12446 324 HN 325 (352)
T ss_pred cC
Confidence 87
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.44 E-value=5.9e-13 Score=113.87 Aligned_cols=118 Identities=16% Similarity=0.300 Sum_probs=90.7
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCC-ceEEEEEeCCcccccchhHHHhhcCCCeEEeecc--ChhhhcCCCCccceee
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSN-ICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA--PQVLILNHPAVGGFMT 77 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~-~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~--p~~~il~~~~~~~~v~ 77 (212)
|+|+||..... .+++.+...+ +.|++. +.... .....|+.+..|. +...+|+.+++ +|+
T Consensus 195 iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~---------~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs 256 (318)
T PF13528_consen 195 ILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA---------DPRPGNIHVRPFSTPDFAELMAAADL--VIS 256 (318)
T ss_pred EEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc---------cccCCCEEEeecChHHHHHHHHhCCE--EEE
Confidence 57788877653 4445555544 676665 54320 0125788888876 34568877777 999
Q ss_pred cCChhhHHHHHHcCCCeeccCc--ccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHH
Q 036598 78 HCGWNSVLESVSSGVPMITWPL--FAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQF 150 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~iP~--~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 150 (212)
|||.||++|++++|+|++++|. ..+|..||+.+ +++|+|+.+...+ ++++.|.++|+++
T Consensus 257 ~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~~-------------~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 257 KGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQED-------------LTPERLAEFLERL 317 (318)
T ss_pred CCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEccccc-------------CCHHHHHHHHhcC
Confidence 9999999999999999999999 78999999999 7789999997655 8999999988753
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.36 E-value=4e-12 Score=109.59 Aligned_cols=70 Identities=20% Similarity=0.322 Sum_probs=58.6
Q ss_pred CCCeEEeeccC--hhhhcCCCCccceeecCChhhHHHHHHcCCCeeccCccc--chhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAP--QVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFA--EQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p--~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~--DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
..|+.+.+|.+ ....|..+++ +|||||++|+.|++++|+|++++|... ||..||+.+ ++.|+|+.+...+
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~~~ 301 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEYKE 301 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcChhh
Confidence 36788888886 3456666666 999999999999999999999999954 899999999 5679999986544
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.25 E-value=1.6e-10 Score=100.38 Aligned_cols=116 Identities=13% Similarity=0.184 Sum_probs=85.2
Q ss_pred eEEEEEeCCcccccchhHHHhhc-CCCeEEeeccCh-hhhcCCCCccceeecCChhhHHHHHHcCCCeeccCc----ccc
Q 036598 29 CFIWVIKSDAFLLLDKDFEERVK-DRGLIIKGWAPQ-VLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPL----FAE 102 (212)
Q Consensus 29 ~viw~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~p~-~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~----~~D 102 (212)
.++|.+|.... +.+.+... .-++.+.+|+++ ..+++.+++ +|+|+|.++++|++++|+|+|++|. ..+
T Consensus 214 ~~~~~~G~g~~----~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~ 287 (357)
T PRK00726 214 QVIHQTGKGDL----EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDH 287 (357)
T ss_pred EEEEEcCCCcH----HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCc
Confidence 45666676542 12222222 223677788843 578888887 9999999999999999999999997 368
Q ss_pred hhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHH
Q 036598 103 QFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRA 165 (212)
Q Consensus 103 Q~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a 165 (212)
|..|+..+.+ .|.|+.+..++ ++++++.+++.+++ +|++..++|++++
T Consensus 288 ~~~~~~~i~~-~~~g~~~~~~~-------------~~~~~l~~~i~~ll-~~~~~~~~~~~~~ 335 (357)
T PRK00726 288 QTANARALVD-AGAALLIPQSD-------------LTPEKLAEKLLELL-SDPERLEAMAEAA 335 (357)
T ss_pred HHHHHHHHHH-CCCEEEEEccc-------------CCHHHHHHHHHHHH-cCHHHHHHHHHHH
Confidence 9999999944 69999997654 67999999999999 8844444444443
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.23 E-value=1.1e-10 Score=100.81 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=92.6
Q ss_pred HHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-ChhhhcCCCCccceeecCChhhHHHHHHcCCCeec
Q 036598 18 EIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-PQVLILNHPAVGGFMTHCGWNSVLESVSSGVPMIT 96 (212)
Q Consensus 18 ~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~ 96 (212)
.++..+.+.+..+++.+|....+.+.+...+ . ..++.+.+|. +...+|+.+++ +|+++|.+++.|++++|+|+|+
T Consensus 202 ~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~-~-~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~ 277 (350)
T cd03785 202 EALAELLRKRLQVIHQTGKGDLEEVKKAYEE-L-GVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAIL 277 (350)
T ss_pred HHHHHhhccCeEEEEEcCCccHHHHHHHHhc-c-CCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEE
Confidence 3444554445666777776532222221111 1 3678888887 34568877777 9999999999999999999999
Q ss_pred cCc----ccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHH
Q 036598 97 WPL----FAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 97 iP~----~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~ 167 (212)
+|. ..+|..|+..+.+ .|.|+.+...+ .+.+++.+++.+++ +|.+..+.|++++++
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~-------------~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~ 337 (350)
T cd03785 278 IPLPYAADDHQTANARALVK-AGAAVLIPQEE-------------LTPERLAAALLELL-SDPERLKAMAEAARS 337 (350)
T ss_pred eecCCCCCCcHHHhHHHHHh-CCCEEEEecCC-------------CCHHHHHHHHHHHh-cCHHHHHHHHHHHHh
Confidence 986 3678899999855 59999996543 57899999999999 885555555555443
No 35
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.17 E-value=3.4e-10 Score=100.21 Aligned_cols=143 Identities=14% Similarity=0.234 Sum_probs=98.3
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHh-h-CCceEEEEEeCCcccccchhHHHhh-cCCCeEEeeccChh-hhcCCCCccceee
Q 036598 2 YVCFGSLCEFAESQLLEIALGLE-S-SNICFIWVIKSDAFLLLDKDFEERV-KDRGLIIKGWAPQV-LILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~-~-~~~~viw~~~~~~~~~lp~~~~~~~-~~~~~~~~~~~p~~-~il~~~~~~~~v~ 77 (212)
++..|+++. .+.+..+++++. . .+.++++..|.+. .+-+.+.+.. ..+++.+.+|.++. .+++.+++ +|+
T Consensus 206 lv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~--~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl--~I~ 279 (391)
T PRK13608 206 LMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK--ELKRSLTAKFKSNENVLILGYTKHMNEWMASSQL--MIT 279 (391)
T ss_pred EEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH--HHHHHHHHHhccCCCeEEEeccchHHHHHHhhhE--EEe
Confidence 456677763 133444444432 2 3567777766542 1111222111 23567888898764 58888888 999
Q ss_pred cCChhhHHHHHHcCCCeecc-CcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCcc
Q 036598 78 HCGWNSVLESVSSGVPMITW-PLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGE 156 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~i-P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 156 (212)
..|..|+.|++++|+|+|+. |...+|..|+..+ .+.|+|+.+ -+.+++.+++.+++ +|++
T Consensus 280 k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~-----------------~~~~~l~~~i~~ll-~~~~ 340 (391)
T PRK13608 280 KPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIA-----------------DTPEEAIKIVASLT-NGNE 340 (391)
T ss_pred CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEe-----------------CCHHHHHHHHHHHh-cCHH
Confidence 98889999999999999998 7666678899998 556999876 36678999999999 8866
Q ss_pred chHHHHHHHHHHH
Q 036598 157 EVEGMRKRARKLS 169 (212)
Q Consensus 157 ~~~~~~~~a~~l~ 169 (212)
..+.|++|++++.
T Consensus 341 ~~~~m~~~~~~~~ 353 (391)
T PRK13608 341 QLTNMISTMEQDK 353 (391)
T ss_pred HHHHHHHHHHHhc
Confidence 6666666666543
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.04 E-value=8.7e-09 Score=90.84 Aligned_cols=119 Identities=17% Similarity=0.237 Sum_probs=83.5
Q ss_pred CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh-hhcCCCCccceeecCChhhHHHHHHcCCCeeccCcccchh
Q 036598 26 SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV-LILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQF 104 (212)
Q Consensus 26 ~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~-~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~ 104 (212)
.+.++++..|.+. .+-+.+.+.....++.+.+|+++. .+++.+++ +|+.+|.+|+.||+++|+|+|+.+....|.
T Consensus 240 ~~~~~~vi~G~~~--~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe 315 (382)
T PLN02605 240 PIGQVVVICGRNK--KLQSKLESRDWKIPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQE 315 (382)
T ss_pred CCceEEEEECCCH--HHHHHHHhhcccCCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccc
Confidence 3466777777542 111112211113457788898864 57877787 999999999999999999999998766675
Q ss_pred -hHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC-ccchHHHHHHHHH
Q 036598 105 -YNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING-GEEVEGMRKRARK 167 (212)
Q Consensus 105 -~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~~a~~ 167 (212)
.|+..+.+ .|.|+.+ -+++++.+++.+++ +| ++..+.|++++++
T Consensus 316 ~gn~~~i~~-~g~g~~~-----------------~~~~~la~~i~~ll-~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 316 EGNVPYVVD-NGFGAFS-----------------ESPKEIARIVAEWF-GDKSDELEAMSENALK 361 (382)
T ss_pred hhhHHHHHh-CCceeec-----------------CCHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 68888844 5998765 36788999999999 76 4444455555444
No 37
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.00 E-value=2.7e-09 Score=91.93 Aligned_cols=88 Identities=19% Similarity=0.371 Sum_probs=69.2
Q ss_pred ChhhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcc---cchhhHHHHHHHHhcceeEeeccCCccccccchhcccc
Q 036598 62 PQVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLF---AEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLV 138 (212)
Q Consensus 62 p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~---~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~ 138 (212)
+...+|+.+++ +|+++|.+++.|++++|+|+|+.|.. .+|..|+..+ ...+.|+.+...+ .
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~~~-------------~ 306 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQKE-------------L 306 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEeccc-------------C
Confidence 34567888887 99999988999999999999999863 4678888888 5569999886543 5
Q ss_pred CHHHHHHHHHHHhhcCccchHHHHHHHH
Q 036598 139 RRDRVEKVVYQFMINGGEEVEGMRKRAR 166 (212)
Q Consensus 139 ~~~~l~~ai~~vl~~~~~~~~~~~~~a~ 166 (212)
+.+++.+++.+++ +|++..+.|.++++
T Consensus 307 ~~~~l~~~i~~ll-~~~~~~~~~~~~~~ 333 (348)
T TIGR01133 307 LPEKLLEALLKLL-LDPANLEAMAEAAR 333 (348)
T ss_pred CHHHHHHHHHHHH-cCHHHHHHHHHHHH
Confidence 7899999999999 88444444544443
No 38
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.00 E-value=9.2e-09 Score=90.28 Aligned_cols=141 Identities=15% Similarity=0.237 Sum_probs=95.4
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhh-CCceEEEEEeCCcccccchhHHHhh--cCCCeEEeeccChh-hhcCCCCccceee
Q 036598 2 YVCFGSLCEFAESQLLEIALGLES-SNICFIWVIKSDAFLLLDKDFEERV--KDRGLIIKGWAPQV-LILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~-~~~~viw~~~~~~~~~lp~~~~~~~--~~~~~~~~~~~p~~-~il~~~~~~~~v~ 77 (212)
++..|+.... +.+..+++++.+ .+.++++..+.+.. +.+.+.+.. ...++.+.+|+++. .+++.+++ +|+
T Consensus 206 l~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~--~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~--~v~ 279 (380)
T PRK13609 206 LIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA--LKQSLEDLQETNPDALKVFGYVENIDELFRVTSC--MIT 279 (380)
T ss_pred EEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH--HHHHHHHHHhcCCCcEEEEechhhHHHHHHhccE--EEe
Confidence 3444666542 234455666654 46777777664320 112222211 12578888998874 68888887 999
Q ss_pred cCChhhHHHHHHcCCCeecc-CcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCcc
Q 036598 78 HCGWNSVLESVSSGVPMITW-PLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGE 156 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~i-P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 156 (212)
.+|..|+.|++++|+|+|+. |..+.+..|+..+ ...|+|+.. .+.+++.+++.+++ +|++
T Consensus 280 ~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~-----------------~~~~~l~~~i~~ll-~~~~ 340 (380)
T PRK13609 280 KPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVI-----------------RDDEEVFAKTEALL-QDDM 340 (380)
T ss_pred CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEE-----------------CCHHHHHHHHHHHH-CCHH
Confidence 99989999999999999985 6666778898888 545888765 35688999999999 8855
Q ss_pred chHHHHHHHHH
Q 036598 157 EVEGMRKRARK 167 (212)
Q Consensus 157 ~~~~~~~~a~~ 167 (212)
..+.|++++++
T Consensus 341 ~~~~m~~~~~~ 351 (380)
T PRK13609 341 KLLQMKEAMKS 351 (380)
T ss_pred HHHHHHHHHHH
Confidence 55555555544
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.85 E-value=1.2e-08 Score=86.67 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=73.5
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhh--CCceEEEEEeCCcccccchhHHHhh-cCCCeEEeeccChh-hhcCCCCcccee
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLES--SNICFIWVIKSDAFLLLDKDFEERV-KDRGLIIKGWAPQV-LILNHPAVGGFM 76 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~lp~~~~~~~-~~~~~~~~~~~p~~-~il~~~~~~~~v 76 (212)
|+|+||...... ....++++|.+ .+.++.+.+|+... ..+.+.+.. ..+|+.+..|++++ .+|+.+++ +|
T Consensus 173 iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl--~I 246 (279)
T TIGR03590 173 VLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--NLDELKKFAKEYPNIILFIDVENMAELMNEADL--AI 246 (279)
T ss_pred EEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--CHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--EE
Confidence 578888655432 23344555544 45678888886531 112222221 24578888999886 68988888 99
Q ss_pred ecCChhhHHHHHHcCCCeeccCcccchhhHHHH
Q 036598 77 THCGWNSVLESVSSGVPMITWPLFAEQFYNENF 109 (212)
Q Consensus 77 ~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~ 109 (212)
++|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 247 s~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 247 GAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred ECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999 9999999999999999999999999875
No 40
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.77 E-value=1.7e-07 Score=83.33 Aligned_cols=133 Identities=20% Similarity=0.128 Sum_probs=83.2
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhh----CCceEEEEEeCCc-ccccchhHHHh-h-------------cCCCeEEeeccC
Q 036598 2 YVCFGSLCEFAESQLLEIALGLES----SNICFIWVIKSDA-FLLLDKDFEER-V-------------KDRGLIIKGWAP 62 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~----~~~~viw~~~~~~-~~~lp~~~~~~-~-------------~~~~~~~~~~~p 62 (212)
.+-.||......+.+..+++++.. .+..|++.+.+.. .+.+-..+.+. . ...++.+..+.+
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~ 288 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRG 288 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechH
Confidence 456677765333333344444433 4788888874332 11111111100 0 012344445544
Q ss_pred h-hhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHh----cceeEeeccCCccccccchhccc
Q 036598 63 Q-VLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHW----KIGVGVGVESGLAWGEEEKIGVL 137 (212)
Q Consensus 63 ~-~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~----g~G~~~~~~~~~~~~~~~~~~~~ 137 (212)
+ ..+++.+++ +|+.+|..| .|+++.|+|+|++|+-..|. |+..+ +.. |.++.+..
T Consensus 289 ~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~~--------------- 348 (396)
T TIGR03492 289 AFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLAS--------------- 348 (396)
T ss_pred hHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecCC---------------
Confidence 3 468888887 999999877 99999999999999877786 98776 432 55555532
Q ss_pred cCHHHHHHHHHHHhhcCc
Q 036598 138 VRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 138 ~~~~~l~~ai~~vl~~~~ 155 (212)
.+.+.+.+++.+++ +|+
T Consensus 349 ~~~~~l~~~l~~ll-~d~ 365 (396)
T TIGR03492 349 KNPEQAAQVVRQLL-ADP 365 (396)
T ss_pred CCHHHHHHHHHHHH-cCH
Confidence 34588999999999 873
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.63 E-value=2.1e-07 Score=82.45 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=72.7
Q ss_pred hhhcCCCCccceeecCChhhHHHHHHcCCCeecc----Cccc---------chhhHHHHHHHHhcceeEeeccCCccccc
Q 036598 64 VLILNHPAVGGFMTHCGWNSVLESVSSGVPMITW----PLFA---------EQFYNENFVLTHWKIGVGVGVESGLAWGE 130 (212)
Q Consensus 64 ~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~i----P~~~---------DQ~~na~~v~~~~g~G~~~~~~~~~~~~~ 130 (212)
..+++.+++ +|+.+|..|+ |++++|+|+|++ |+.. .|..|+..++. .++...+.-.+
T Consensus 262 ~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~------ 331 (385)
T TIGR00215 262 RKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEE------ 331 (385)
T ss_pred HHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCC------
Confidence 457877777 9999999988 999999999999 7631 27779998844 47777665444
Q ss_pred cchhccccCHHHHHHHHHHHhhcCc----cchHHHHHHHHHHHHHHH
Q 036598 131 EEKIGVLVRRDRVEKVVYQFMINGG----EEVEGMRKRARKLSELAK 173 (212)
Q Consensus 131 ~~~~~~~~~~~~l~~ai~~vl~~~~----~~~~~~~~~a~~l~~~~~ 173 (212)
++++.|.+.+.++| +|+ ++.+.+++...++.+.+.
T Consensus 332 -------~~~~~l~~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~l~ 370 (385)
T TIGR00215 332 -------CTPHPLAIALLLLL-ENGLKAYKEMHRERQFFEELRQRIY 370 (385)
T ss_pred -------CCHHHHHHHHHHHh-cCCcccHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999 986 667777777777766664
No 42
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.51 E-value=1.2e-06 Score=75.59 Aligned_cols=130 Identities=13% Similarity=0.159 Sum_probs=93.2
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhh-CCce--EEEEEeCCcccccchhHHHhh-----cCCCeEEeeccCh-hhhcCCCCc
Q 036598 2 YVCFGSLCEFAESQLLEIALGLES-SNIC--FIWVIKSDAFLLLDKDFEERV-----KDRGLIIKGWAPQ-VLILNHPAV 72 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~-~~~~--viw~~~~~~~~~lp~~~~~~~-----~~~~~~~~~~~p~-~~il~~~~~ 72 (212)
+||-|-... ..+.+.+.+.+-.. .+.. -+..+|+. +|....++. +.+++.+.+|-.+ ..++..++.
T Consensus 223 lvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~----MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~ 297 (400)
T COG4671 223 LVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF----MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL 297 (400)
T ss_pred EEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC----CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe
Confidence 444443332 23444444444322 3444 44455654 565544332 3478889898776 468877776
Q ss_pred cceeecCChhhHHHHHHcCCCeeccCcc---cchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH
Q 036598 73 GGFMTHCGWNSVLESVSSGVPMITWPLF---AEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ 149 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~GvP~i~iP~~---~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 149 (212)
+|+-||+||++|-|.+|||.+++|.. -+|-.-|.|+ +++|.-=.+..++ +++..+.++++.
T Consensus 298 --vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~pe~-------------lt~~~La~al~~ 361 (400)
T COG4671 298 --VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLLPEN-------------LTPQNLADALKA 361 (400)
T ss_pred --eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeCccc-------------CChHHHHHHHHh
Confidence 99999999999999999999999985 3888899999 7789888887766 899999999998
Q ss_pred Hhhc
Q 036598 150 FMIN 153 (212)
Q Consensus 150 vl~~ 153 (212)
.+ +
T Consensus 362 ~l-~ 364 (400)
T COG4671 362 AL-A 364 (400)
T ss_pred cc-c
Confidence 88 6
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.47 E-value=9.9e-07 Score=77.20 Aligned_cols=106 Identities=10% Similarity=0.106 Sum_probs=66.3
Q ss_pred hhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcccc--------hhhH-----HHHHHHHhcceeEeeccCCccccc
Q 036598 64 VLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAE--------QFYN-----ENFVLTHWKIGVGVGVESGLAWGE 130 (212)
Q Consensus 64 ~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~D--------Q~~n-----a~~v~~~~g~G~~~~~~~~~~~~~ 130 (212)
..+++.+++ +|+.+|.+++ |++++|+|+|++|.... |..| +..+ ...+++..+...
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~------- 324 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQE------- 324 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcCC-------
Confidence 457777777 9999999888 99999999999964321 2121 1222 111222222222
Q ss_pred cchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036598 131 EEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDL 193 (212)
Q Consensus 131 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l 193 (212)
..+++.+.+++.+++ +|++..+.|+++++++.+.++ .++ ...+.++|.++
T Consensus 325 ------~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~-----~~a-~~~~~~~i~~~ 374 (380)
T PRK00025 325 ------EATPEKLARALLPLL-ADGARRQALLEGFTELHQQLR-----CGA-DERAAQAVLEL 374 (380)
T ss_pred ------CCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhC-----CCH-HHHHHHHHHHH
Confidence 268899999999999 986666677777666555432 332 23455555554
No 44
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.43 E-value=1.3e-06 Score=66.85 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=71.6
Q ss_pred CEEeeCCCCCCCHHHHH-----HHHHHHhhCCc-eEEEEEeCCcccccchhHHHhhcCCCeEE--eeccCh-hhhcCCCC
Q 036598 1 LYVCFGSLCEFAESQLL-----EIALGLESSNI-CFIWVIKSDAFLLLDKDFEERVKDRGLII--KGWAPQ-VLILNHPA 71 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~-----~~~~~l~~~~~-~viw~~~~~~~~~lp~~~~~~~~~~~~~~--~~~~p~-~~il~~~~ 71 (212)
+||+-||... ++.+. +.+..|.+.|+ +.+.++|... -..|+......+..++.+ .+|-|. .+.++.++
T Consensus 6 vFVTVGtT~F--d~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~-~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Ad 82 (170)
T KOG3349|consen 6 VFVTVGTTSF--DDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ-PFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSAD 82 (170)
T ss_pred EEEEeccccH--HHHHHHHcCHHHHHHHHHcCccEEEEEecCCc-cCCCCHHHhhcccCCeEEEEEecCccHHHHHhhcc
Confidence 5899999885 32322 24455666664 7778888764 122333332223344444 446665 45566666
Q ss_pred ccceeecCChhhHHHHHHcCCCeeccCc----ccchhhHHHHHHH
Q 036598 72 VGGFMTHCGWNSVLESVSSGVPMITWPL----FAEQFYNENFVLT 112 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~~GvP~i~iP~----~~DQ~~na~~v~~ 112 (212)
+ +|+|+|+||++|.|..|+|.|+++- -.+|-.-|..+++
T Consensus 83 l--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~ 125 (170)
T KOG3349|consen 83 L--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE 125 (170)
T ss_pred E--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh
Confidence 6 9999999999999999999999994 3578888888844
No 45
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.25 E-value=1.5e-05 Score=67.97 Aligned_cols=148 Identities=16% Similarity=0.041 Sum_probs=88.8
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhCC-ceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccceee
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESSN-ICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~~-~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~v~ 77 (212)
++..|+... .+....+++++.+.. ..+++.-.......+.+...+....+|+.+.+++++. .++..+++.++.+
T Consensus 194 i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 194 FLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred EEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 455666543 223444556665554 6655443222111111111122245789999999864 4677777744433
Q ss_pred c---CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhc
Q 036598 78 H---CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMIN 153 (212)
Q Consensus 78 h---gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 153 (212)
+ .| ..++.||+++|+|+|+.+..+... .+.+.-+.|..+.. -+.+++.+++.+++ +
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i~~~~~~g~~~~~---------------~d~~~~~~~i~~l~-~ 331 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YVNLHGVTGLVVPP---------------GDPAALAEAIRRLL-E 331 (357)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCCchh----HHhhCCCceEEeCC---------------CCHHHHHHHHHHHH-H
Confidence 2 33 357999999999999976544443 22111367777753 46789999999999 8
Q ss_pred CccchHHHHHHHHHHHHH
Q 036598 154 GGEEVEGMRKRARKLSEL 171 (212)
Q Consensus 154 ~~~~~~~~~~~a~~l~~~ 171 (212)
|++..+.|++++++..+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 332 DPELRERLGEAARERAEE 349 (357)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 866666777776665443
No 46
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.21 E-value=7e-05 Score=63.54 Aligned_cols=139 Identities=19% Similarity=0.183 Sum_probs=86.5
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhh-CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhh---hcCCCCcccee
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLES-SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVL---ILNHPAVGGFM 76 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~-~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~---il~~~~~~~~v 76 (212)
++..|+... -..+.+.+++..+.. .+..+++. |.... .+.+. ....++.+.+++++.. ++..+++ +|
T Consensus 200 i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~~---~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~--~l 271 (364)
T cd03814 200 LLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGPA---RARLE--ARYPNVHFLGFLDGEELAAAYASADV--FV 271 (364)
T ss_pred EEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCch---HHHHh--ccCCcEEEEeccCHHHHHHHHHhCCE--EE
Confidence 455666544 233444445555433 24565544 43220 01111 2346788888888643 6777777 77
Q ss_pred ecCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh
Q 036598 77 THCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI 152 (212)
Q Consensus 77 ~hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 152 (212)
+.+. .+++.||+++|+|+|+.+..+ +...+ +..+.|..+.. .+.+++.+++.+++
T Consensus 272 ~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~~---------------~~~~~l~~~i~~l~- 330 (364)
T cd03814 272 FPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVEP---------------GDAEAFAAALAALL- 330 (364)
T ss_pred ECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcCC---------------CCHHHHHHHHHHHH-
Confidence 6554 478999999999999987643 44445 44478887754 46677999999999
Q ss_pred cCccchHHHHHHHHHHH
Q 036598 153 NGGEEVEGMRKRARKLS 169 (212)
Q Consensus 153 ~~~~~~~~~~~~a~~l~ 169 (212)
+|++..+.+.+++.+..
T Consensus 331 ~~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 331 ADPELRRRMAARARAEA 347 (364)
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 88655555555555443
No 47
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.16 E-value=5.6e-05 Score=64.07 Aligned_cols=146 Identities=14% Similarity=0.137 Sum_probs=86.9
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhh--CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccce
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLES--SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGF 75 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~ 75 (212)
++..|++.. -..+.+..++..+.. .+..+++.-.......+.+.........++.+.+++|+. .++.++++ +
T Consensus 205 i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~ 282 (374)
T cd03817 205 LLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADL--F 282 (374)
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCE--E
Confidence 445666554 233444455554443 456666543322211111111111235678888999864 36777777 5
Q ss_pred eec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 76 MTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 76 v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
+.. +...++.|++++|+|+|+.+.. ..+..+ +.-+.|..+...+ . ++.+++.+++
T Consensus 283 l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i-~~~~~g~~~~~~~---------------~-~~~~~i~~l~ 341 (374)
T cd03817 283 VFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLV-ADGENGFLFPPGD---------------E-ALAEALLRLL 341 (374)
T ss_pred EecccccCcChHHHHHHHcCCcEEEeCCC----Chhhhe-ecCceeEEeCCCC---------------H-HHHHHHHHHH
Confidence 533 3347899999999999987653 344455 4336788885432 2 8999999999
Q ss_pred hcCccchHHHHHHHHHHHHH
Q 036598 152 INGGEEVEGMRKRARKLSEL 171 (212)
Q Consensus 152 ~~~~~~~~~~~~~a~~l~~~ 171 (212)
++++..+.|.+++++....
T Consensus 342 -~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 342 -QDPELRRRLSKNAEESAEK 360 (374)
T ss_pred -hChHHHHHHHHHHHHHHHH
Confidence 8865555666666665554
No 48
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.05 E-value=0.0001 Score=61.58 Aligned_cols=147 Identities=15% Similarity=0.139 Sum_probs=83.7
Q ss_pred EEeeCCCCCC-CHHHHHHHHHHHh--hCCceEEEEEeCCc-ccccchhHHHhhcCCCeEEeeccCh-hhhcCCCCcccee
Q 036598 2 YVCFGSLCEF-AESQLLEIALGLE--SSNICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGWAPQ-VLILNHPAVGGFM 76 (212)
Q Consensus 2 ~vs~GS~~~~-~~~~~~~~~~~l~--~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~~p~-~~il~~~~~~~~v 76 (212)
++.+|+.... ..+.+..++..+. ..+..+++ +|... ...+.+.........++.+.++.+. ..++..+++ +|
T Consensus 181 i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~i 257 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRI-VGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASI--FV 257 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEE-EeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCE--EE
Confidence 4566665542 3334444455554 23555554 34332 1111111111122445666555333 457777777 55
Q ss_pred ecC----ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh
Q 036598 77 THC----GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI 152 (212)
Q Consensus 77 ~hg----G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 152 (212)
... ..+++.||+++|+|+|+.+....+. .+.+.-..|..+.. .+.+++.+++.+++
T Consensus 258 ~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~~---------------~~~~~~~~~i~~ll- 317 (348)
T cd03820 258 LTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVPN---------------GDVEALAEALLRLM- 317 (348)
T ss_pred eCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeCC---------------CCHHHHHHHHHHHH-
Confidence 443 2479999999999999876544332 22233137877754 46689999999999
Q ss_pred cCccchHHHHHHHHHHHHH
Q 036598 153 NGGEEVEGMRKRARKLSEL 171 (212)
Q Consensus 153 ~~~~~~~~~~~~a~~l~~~ 171 (212)
+|++..+.+.+++++..+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~ 336 (348)
T cd03820 318 EDEELRKRMGANARESAER 336 (348)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 8866666666666554443
No 49
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.01 E-value=0.00025 Score=59.39 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=65.4
Q ss_pred cCCCeEEeeccChh---hhcCCCCccceee----cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeecc
Q 036598 51 KDRGLIIKGWAPQV---LILNHPAVGGFMT----HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVE 123 (212)
Q Consensus 51 ~~~~~~~~~~~p~~---~il~~~~~~~~v~----hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~ 123 (212)
...++.+.+++++. .++..+++ +|+ -|..+++.||+++|+|+|+.+. ......+ +..+.|+.+..
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~~- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVPP- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeCC-
Confidence 45678888898643 46777777 553 2456799999999999998776 3344555 43367777754
Q ss_pred CCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHH
Q 036598 124 SGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRAR 166 (212)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~ 166 (212)
.+.+++.+++.+++ +|++....+.++++
T Consensus 326 --------------~~~~~l~~~i~~~~-~~~~~~~~~~~~~~ 353 (374)
T cd03801 326 --------------GDPEALAEAILRLL-DDPELRRRLGEAAR 353 (374)
T ss_pred --------------CCHHHHHHHHHHHH-cChHHHHHHHHHHH
Confidence 45789999999999 88555555555544
No 50
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.99 E-value=8.5e-05 Score=57.45 Aligned_cols=142 Identities=18% Similarity=0.187 Sum_probs=84.0
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHh---hCCceEEEEEeCCc-ccccchhHHHhhcCCCeEEeeccCh---hhhcCCCCcc
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLE---SSNICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGWAPQ---VLILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~---~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~~p~---~~il~~~~~~ 73 (212)
++..|.... -....+..++..+. ..++. ++.+|... ...+...........++.+.++.++ ..++..+++
T Consensus 18 il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~di- 95 (172)
T PF00534_consen 18 ILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK-LVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYKSSDI- 95 (172)
T ss_dssp EEEESESSGGGTHHHHHHHHHHHHHHHHTTEE-EEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHHHTSE-
T ss_pred EEEEecCccccCHHHHHHHHHHHHhhcCCCeE-EEEEccccccccccccccccccccccccccccccccccccccccee-
Confidence 455666655 23344444444443 34454 44455221 1111111222234567888888872 346777777
Q ss_pred ceeec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH
Q 036598 74 GFMTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ 149 (212)
Q Consensus 74 ~~v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 149 (212)
+|+. |...++.||+++|+|+|+.. ...+...+ .....|..+.. .+.+++.++|.+
T Consensus 96 -~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~~---------------~~~~~l~~~i~~ 154 (172)
T PF00534_consen 96 -FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFDP---------------NDIEELADAIEK 154 (172)
T ss_dssp -EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEEST---------------TSHHHHHHHHHH
T ss_pred -ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeCC---------------CCHHHHHHHHHH
Confidence 6655 55679999999999999754 45555666 44356888854 478899999999
Q ss_pred HhhcCccchHHHHHHHHH
Q 036598 150 FMINGGEEVEGMRKRARK 167 (212)
Q Consensus 150 vl~~~~~~~~~~~~~a~~ 167 (212)
++ ++.+..+.|.+++++
T Consensus 155 ~l-~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 155 LL-NDPELRQKLGKNARE 171 (172)
T ss_dssp HH-HHHHHHHHHHHHHHH
T ss_pred HH-CCHHHHHHHHHHhcC
Confidence 99 875555556666554
No 51
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.98 E-value=0.0002 Score=60.71 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=85.9
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhhC-CceEEEEEeCCc-ccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccce
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLESS-NICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGF 75 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~ 75 (212)
++..|+... -..+.+...+..+... +..+++ +|... ...+.+ .......+++.+.+++++. .++..+++.++
T Consensus 223 i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~~~~~~~-~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~ 300 (394)
T cd03794 223 VLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPEKEELKE-LAKALGLDNVTFLGRVPKEELPELLAAADVGLV 300 (394)
T ss_pred EEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcccHHHHHH-HHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEE
Confidence 455666554 2334444445544433 566554 44332 111111 1112234678888888754 46777777333
Q ss_pred eecCC-------hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 76 MTHCG-------WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 76 v~hgG-------~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
.++.+ .+++.||+++|+|+|+.+..+.+. .+ ...+.|..+.. -+.+++.+++.
T Consensus 301 ~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~-~~~~~g~~~~~---------------~~~~~l~~~i~ 360 (394)
T cd03794 301 PLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LV-EEAGAGLVVPP---------------GDPEALAAAIL 360 (394)
T ss_pred eccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hh-ccCCcceEeCC---------------CCHHHHHHHHH
Confidence 22221 345899999999999998765443 22 22266777754 36789999999
Q ss_pred HHhhcCccchHHHHHHHHHHHH
Q 036598 149 QFMINGGEEVEGMRKRARKLSE 170 (212)
Q Consensus 149 ~vl~~~~~~~~~~~~~a~~l~~ 170 (212)
+++ +|.+..+.+++++++...
T Consensus 361 ~~~-~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 361 ELL-DDPEERAEMGENGRRYVE 381 (394)
T ss_pred HHH-hChHHHHHHHHHHHHHHH
Confidence 999 886666666666665544
No 52
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.96 E-value=0.00012 Score=63.07 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=64.2
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeec----------CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhccee
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTH----------CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGV 118 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~h----------gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~ 118 (212)
..++.+.+++|+. .+++.+++ +|.. |-.+++.||+++|+|+|.-+... +...+ ..-+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhhe-ecCCeeE
Confidence 4667788888754 45777777 5432 23579999999999999877643 44455 3346788
Q ss_pred EeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHH
Q 036598 119 GVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~ 167 (212)
.+.. -+.+++.+++.+++ +|.+....+..++++
T Consensus 317 ~~~~---------------~d~~~l~~~i~~l~-~~~~~~~~~~~~a~~ 349 (367)
T cd05844 317 LVPE---------------GDVAALAAALGRLL-ADPDLRARMGAAGRR 349 (367)
T ss_pred EECC---------------CCHHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence 7754 46688999999999 874444455555444
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.96 E-value=0.00029 Score=59.06 Aligned_cols=144 Identities=19% Similarity=0.139 Sum_probs=83.8
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhh--CCceEEEEEeCCcccccchh-HHHhhcCCCeEEeeccCh-hhhcCCCCcccee
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLES--SNICFIWVIKSDAFLLLDKD-FEERVKDRGLIIKGWAPQ-VLILNHPAVGGFM 76 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~lp~~-~~~~~~~~~~~~~~~~p~-~~il~~~~~~~~v 76 (212)
++..|++.. -..+.+.+.+..+.+ .+.++++.-+.......... ........++.+.++..+ ..++..+++ +|
T Consensus 191 i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i 268 (359)
T cd03808 191 FLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FV 268 (359)
T ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccE--EE
Confidence 566676654 233445555555543 45665544333221111110 111223456777676544 457777777 55
Q ss_pred ecCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh
Q 036598 77 THCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI 152 (212)
Q Consensus 77 ~hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 152 (212)
.... .+++.||+++|+|+|+-+... ....+ +..+.|..+.. -+.+++.+++.+++
T Consensus 269 ~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~~---------------~~~~~~~~~i~~l~- 327 (359)
T cd03808 269 LPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVPP---------------GDAEALADAIERLI- 327 (359)
T ss_pred ecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEECC---------------CCHHHHHHHHHHHH-
Confidence 4332 579999999999999876533 33444 43367877753 36788999999998
Q ss_pred cCccchHHHHHHHHHH
Q 036598 153 NGGEEVEGMRKRARKL 168 (212)
Q Consensus 153 ~~~~~~~~~~~~a~~l 168 (212)
.|++....+.+++++.
T Consensus 328 ~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 328 EDPELRARMGQAARKR 343 (359)
T ss_pred hCHHHHHHHHHHHHHH
Confidence 8855555555555544
No 54
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.94 E-value=0.00028 Score=63.91 Aligned_cols=147 Identities=15% Similarity=0.191 Sum_probs=76.9
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc--ccccchhHHHh-hcCCCeEEeeccChhh---hcCCCCccc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA--FLLLDKDFEER-VKDRGLIIKGWAPQVL---ILNHPAVGG 74 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~--~~~lp~~~~~~-~~~~~~~~~~~~p~~~---il~~~~~~~ 74 (212)
+|.+|.+....+++.+....+-|++.+-..+|...... .+.+.+.+... +....+.+.+..++.. .+...++.+
T Consensus 287 vF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~L 366 (468)
T PF13844_consen 287 VFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQLADICL 366 (468)
T ss_dssp EEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG-SEEE
T ss_pred EEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhhCCEEe
Confidence 35566666668888888888888888999999887654 11222222221 2345577777666433 334455522
Q ss_pred -eeecCChhhHHHHHHcCCCeeccCcccc-hhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh
Q 036598 75 -FMTHCGWNSVLESVSSGVPMITWPLFAE-QFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI 152 (212)
Q Consensus 75 -~v~hgG~~sv~eal~~GvP~i~iP~~~D-Q~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 152 (212)
-...+|.+|.+|||++|||+|.+|--.- ...-+..+ ..+|+.-.+. .+.++..+...++-
T Consensus 367 DT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA----------------~s~~eYv~~Av~La- 428 (468)
T PF13844_consen 367 DTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIA----------------DSEEEYVEIAVRLA- 428 (468)
T ss_dssp --SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB-----------------SSHHHHHHHHHHHH-
T ss_pred eCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcC----------------CCHHHHHHHHHHHh-
Confidence 2456788999999999999999995332 23344455 6667765553 34555555444565
Q ss_pred cCccchHHHHHHH
Q 036598 153 NGGEEVEGMRKRA 165 (212)
Q Consensus 153 ~~~~~~~~~~~~a 165 (212)
+|.++...+|++.
T Consensus 429 ~D~~~l~~lR~~L 441 (468)
T PF13844_consen 429 TDPERLRALRAKL 441 (468)
T ss_dssp H-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 6655555555543
No 55
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.94 E-value=0.00046 Score=61.53 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=60.2
Q ss_pred hhcCCCCccceee-----cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccC
Q 036598 65 LILNHPAVGGFMT-----HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVR 139 (212)
Q Consensus 65 ~il~~~~~~~~v~-----hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~ 139 (212)
.+++.+++ ++. -+|..++.|++++|+|+|.-|...++......+ ...|.++.. -+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~-----------------~d 374 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQV-----------------ED 374 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEE-----------------CC
Confidence 46666676 332 134456999999999999999888777766666 333555443 36
Q ss_pred HHHHHHHHHHHhhcCccchHHHHHHHHHHHH
Q 036598 140 RDRVEKVVYQFMINGGEEVEGMRKRARKLSE 170 (212)
Q Consensus 140 ~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~ 170 (212)
.+++.+++.+++ +|++..+.|.+++++..+
T Consensus 375 ~~~La~~l~~ll-~~~~~~~~m~~~a~~~~~ 404 (425)
T PRK05749 375 AEDLAKAVTYLL-TDPDARQAYGEAGVAFLK 404 (425)
T ss_pred HHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 688999999999 886666666666665544
No 56
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.93 E-value=0.00037 Score=62.05 Aligned_cols=97 Identities=19% Similarity=0.243 Sum_probs=65.4
Q ss_pred CCCeEEeeccChhh---hcCCCCccceeecCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAPQVL---ILNHPAVGGFMTHCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p~~~---il~~~~~~~~v~hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
..++.+.+|+++.+ ++..+++.+||...- .+++.||+++|+|+|+-... .....+ ..-+.|+.+...
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i-~~~~~G~l~~~~- 361 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV-DNGGNGLLLSKD- 361 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHh-cCCCcEEEeCCC-
Confidence 45677889998653 454444445765443 46899999999999986542 234555 542478887542
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
-+.+++.++|.+++ +|++....|++++++.
T Consensus 362 -------------~~~~~la~~I~~ll-~~~~~~~~m~~~ar~~ 391 (407)
T cd04946 362 -------------PTPNELVSSLSKFI-DNEEEYQTMREKAREK 391 (407)
T ss_pred -------------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 36789999999999 8855555555555443
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.90 E-value=0.00037 Score=58.63 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=58.5
Q ss_pred CCCeEEeeccChh---hhcCCCCccceee--cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMT--HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~--hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
.+++.+.+++++. .++..+++-++.+ -|..+++.|++++|+|+|+-+..+ ....+ +..+.|..+..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~-~~~~~g~~~~~---- 328 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEII-TDGENGLLVPP---- 328 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHh-cCCcceeEECC----
Confidence 4678888898864 4677777733222 244678999999999999876533 34445 44456777754
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
-+.+++.+++.+++ ++.
T Consensus 329 -----------~~~~~l~~~i~~~~-~~~ 345 (377)
T cd03798 329 -----------GDPEALAEAILRLL-ADP 345 (377)
T ss_pred -----------CCHHHHHHHHHHHh-cCc
Confidence 46788999999999 873
No 58
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.90 E-value=0.00029 Score=59.49 Aligned_cols=142 Identities=17% Similarity=0.090 Sum_probs=82.6
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccceee
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~v~ 77 (212)
++..|++.. -..+.+..++..+...++.+++. |...... ..........++.+.+++++. .+++.+++.++-+
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~--~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELE--EESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhh--HHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 455666654 22333444444443345665544 4332100 000000234678888998654 4677787733323
Q ss_pred c--CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 78 H--CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 78 h--gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
+ .| ..++.|++++|+|+|+.+.. .....+ +.-+.|..+.. -+.+++.+++.+++ +|
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~---------------~d~~~l~~~i~~l~-~~ 329 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLFPP---------------GDAEDLAAALERLI-DD 329 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEECC---------------CCHHHHHHHHHHHH-hC
Confidence 2 33 45899999999999987653 345555 44347877754 35789999999999 88
Q ss_pred ccchHHHHHHHHH
Q 036598 155 GEEVEGMRKRARK 167 (212)
Q Consensus 155 ~~~~~~~~~~a~~ 167 (212)
++..+.+.+++++
T Consensus 330 ~~~~~~~~~~~~~ 342 (359)
T cd03823 330 PDLLERLRAGIEP 342 (359)
T ss_pred hHHHHHHHHhHHH
Confidence 5555555555443
No 59
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.90 E-value=0.0003 Score=59.93 Aligned_cols=145 Identities=16% Similarity=0.087 Sum_probs=82.9
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhh--CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccce
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLES--SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGF 75 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~ 75 (212)
++.+|+... -..+.+...+..+.. .+..+++.-.......+-....+....+++.+.+++|+. .++.++++.++
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~ 261 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVL 261 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEe
Confidence 455566543 233444444444443 345555443222111111111111235678888888753 46777777333
Q ss_pred eec--------CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 76 MTH--------CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 76 v~h--------gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
-+. |..+++.|++++|+|+|+.+... ....+ +....|..+.. -+.+++.+++
T Consensus 262 ~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~~---------------~~~~~l~~~i 321 (355)
T cd03799 262 PSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVPP---------------GDPEALADAI 321 (355)
T ss_pred cceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeCC---------------CCHHHHHHHH
Confidence 322 33579999999999999876532 22344 44247877743 3678999999
Q ss_pred HHHhhcCccchHHHHHHHHH
Q 036598 148 YQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 148 ~~vl~~~~~~~~~~~~~a~~ 167 (212)
.+++ +|++....+.+++++
T Consensus 322 ~~~~-~~~~~~~~~~~~a~~ 340 (355)
T cd03799 322 ERLL-DDPELRREMGEAGRA 340 (355)
T ss_pred HHHH-hCHHHHHHHHHHHHH
Confidence 9999 875555555555544
No 60
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.87 E-value=0.00049 Score=58.17 Aligned_cols=95 Identities=15% Similarity=0.107 Sum_probs=63.7
Q ss_pred cCCCeEEeeccChh---hhcCCCCccceeec--CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCC
Q 036598 51 KDRGLIIKGWAPQV---LILNHPAVGGFMTH--CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESG 125 (212)
Q Consensus 51 ~~~~~~~~~~~p~~---~il~~~~~~~~v~h--gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~ 125 (212)
..+++.+.+++++. .++..+++-++-++ |-.+++.||+++|+|+|+.+.. .....+ .. +.|....
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~~---- 329 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVVD---- 329 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEeC----
Confidence 35678888999853 35777777333232 2247899999999999997643 234444 44 7777663
Q ss_pred ccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 126 LAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 126 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
.+.+++.+++.+++ +|++..+.+.+++++.
T Consensus 330 ------------~~~~~~~~~i~~l~-~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 330 ------------DDVDALAAALRRAL-ELPQRLKAMGENGRAL 359 (375)
T ss_pred ------------CChHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 24488999999999 8755555555555554
No 61
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.85 E-value=0.0004 Score=62.83 Aligned_cols=139 Identities=18% Similarity=0.144 Sum_probs=86.3
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhC-CceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccceee
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESS-NICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~v~ 77 (212)
++..|++.. .+.+..+++++... +..+++ +|... ..+.+.+.....++.+.+++++. .+++.+++ ||.
T Consensus 266 i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G~---~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~ 337 (465)
T PLN02871 266 IVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDGP---YREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVM 337 (465)
T ss_pred EEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCCh---HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEE
Confidence 345565543 23344556666554 566554 44332 11233333344578888898753 47777777 664
Q ss_pred cCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHH---hcceeEeeccCCccccccchhccccCHHHHHHHHHHH
Q 036598 78 HCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTH---WKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQF 150 (212)
Q Consensus 78 hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~---~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 150 (212)
-.. ..++.|++++|+|+|+....+ ....+ +. -+.|..+.. -+.+++.+++.++
T Consensus 338 pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv-~~~~~~~~G~lv~~---------------~d~~~la~~i~~l 397 (465)
T PLN02871 338 PSESETLGFVVLEAMASGVPVVAARAGG----IPDII-PPDQEGKTGFLYTP---------------GDVDDCVEKLETL 397 (465)
T ss_pred CCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh-hcCCCCCceEEeCC---------------CCHHHHHHHHHHH
Confidence 433 357999999999999876432 22233 33 367888854 3668899999999
Q ss_pred hhcCccchHHHHHHHHHHH
Q 036598 151 MINGGEEVEGMRKRARKLS 169 (212)
Q Consensus 151 l~~~~~~~~~~~~~a~~l~ 169 (212)
+ +|++..+.|.+++++..
T Consensus 398 l-~~~~~~~~~~~~a~~~~ 415 (465)
T PLN02871 398 L-ADPELRERMGAAAREEV 415 (465)
T ss_pred H-hCHHHHHHHHHHHHHHH
Confidence 9 88666666666666543
No 62
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.85 E-value=0.00014 Score=62.76 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=84.4
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccceeec
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGFMTH 78 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~v~h 78 (212)
++..|.+.. .+.+..+++++...+.++++ +|.... .+.+.+ ...+++.+.+++|+. .+++.+++-++-+.
T Consensus 198 il~~G~~~~--~K~~~~li~a~~~~~~~l~i-vG~g~~---~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~ 270 (351)
T cd03804 198 YLSVGRLVP--YKRIDLAIEAFNKLGKRLVV-IGDGPE---LDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAE 270 (351)
T ss_pred EEEEEcCcc--ccChHHHHHHHHHCCCcEEE-EECChh---HHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc
Confidence 345566554 23355566777766777654 444321 112222 345789999999874 46778887443344
Q ss_pred CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc-c
Q 036598 79 CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG-E 156 (212)
Q Consensus 79 gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~ 156 (212)
-|. .++.|++++|+|+|.....+ ....+ ..-..|+.+.. -+.+++.++|.+++ +|+ .
T Consensus 271 e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~~---------------~~~~~la~~i~~l~-~~~~~ 329 (351)
T cd03804 271 EDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFEE---------------QTVESLAAAVERFE-KNEDF 329 (351)
T ss_pred CCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeCC---------------CCHHHHHHHHHHHH-hCccc
Confidence 343 46789999999999986533 22334 33357887754 46678999999999 874 3
Q ss_pred chHHHHHHHH
Q 036598 157 EVEGMRKRAR 166 (212)
Q Consensus 157 ~~~~~~~~a~ 166 (212)
..+.++++++
T Consensus 330 ~~~~~~~~~~ 339 (351)
T cd03804 330 DPQAIRAHAE 339 (351)
T ss_pred CHHHHHHHHH
Confidence 3444444443
No 63
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.84 E-value=0.00055 Score=59.39 Aligned_cols=94 Identities=11% Similarity=0.111 Sum_probs=66.4
Q ss_pred CCCeEEeeccChhh---hcCCCCccceeec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAPQVL---ILNHPAVGGFMTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p~~~---il~~~~~~~~v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
..++.+.+++|+.. ++..+++ +++. |-..++.||+++|+|+|+.+..+ ....+ +.-+.|..+..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~~-- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVDP-- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeCC--
Confidence 46788889998754 5777777 6643 22468999999999999876532 44455 54468888754
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
-+.+++.+++.+++ +|.+....+.+++++.
T Consensus 353 -------------~~~~~l~~~i~~l~-~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 353 -------------RDPEALAAALRRLL-TDPALRRRLSRAGLRR 382 (398)
T ss_pred -------------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 46789999999999 8755555566665543
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.84 E-value=0.00026 Score=61.45 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=69.1
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceeecC--ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccc
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMTHC--GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAW 128 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~hg--G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 128 (212)
..++.+.++.++ ..++..+++-++.++. ...++.||+++|+|+|+..... .....+ ..-..|..+..
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~~------ 329 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVPK------ 329 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeCC------
Confidence 456667666555 3578888885555553 3569999999999999864321 122334 43357888754
Q ss_pred cccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHH
Q 036598 129 GEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELA 172 (212)
Q Consensus 129 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~ 172 (212)
-+.+++.++|.+++ +|++..+.+.+++.+.++..
T Consensus 330 ---------~d~~~la~~i~~ll-~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 330 ---------GDIEALAEAIIELL-NDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred ---------CcHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHh
Confidence 46789999999999 88666667777777665443
No 65
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.82 E-value=0.00059 Score=59.42 Aligned_cols=146 Identities=15% Similarity=0.184 Sum_probs=82.7
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhC--CceEEEEEeCCc-ccccchhHHHhhcCCCeEEeeccCh--h---hhcCCCCcc
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESS--NICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGWAPQ--V---LILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~--~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~~p~--~---~il~~~~~~ 73 (212)
++..|.+.....+.+..+++++... +..++ .+|... .+.+.+...+.....++.+.+|.++ . ..++.+++
T Consensus 183 i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~- 260 (359)
T PRK09922 183 FLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSA- 260 (359)
T ss_pred EEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcE-
Confidence 4556655432223345556665543 45544 444432 2222111122223567888888754 2 23444555
Q ss_pred ceee--c--CChhhHHHHHHcCCCeeccC-cccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 74 GFMT--H--CGWNSVLESVSSGVPMITWP-LFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 74 ~~v~--h--gG~~sv~eal~~GvP~i~iP-~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
+|. + |-..++.||+++|+|+|+.. ..+ ....+ +.-..|..+.. -+.+++.+++.
T Consensus 261 -~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~~---------------~d~~~la~~i~ 319 (359)
T PRK09922 261 -LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYTP---------------GNIDEFVGKLN 319 (359)
T ss_pred -EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEECC---------------CCHHHHHHHHH
Confidence 553 3 22579999999999999875 322 22344 44356877744 47789999999
Q ss_pred HHhhcCcc--chHHHHHHHHHHHHH
Q 036598 149 QFMINGGE--EVEGMRKRARKLSEL 171 (212)
Q Consensus 149 ~vl~~~~~--~~~~~~~~a~~l~~~ 171 (212)
+++ +|.+ ....+++++++++..
T Consensus 320 ~l~-~~~~~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 320 KVI-SGEVKYQHDAIPNSIERFYEV 343 (359)
T ss_pred HHH-hCcccCCHHHHHHHHHHhhHH
Confidence 999 8755 244556665555554
No 66
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.80 E-value=0.00031 Score=59.23 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=95.7
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHh-hcCCCeEEeeccChh-hhcCCCCccceeec
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEER-VKDRGLIIKGWAPQV-LILNHPAVGGFMTH 78 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~-~~~~~~~~~~~~p~~-~il~~~~~~~~v~h 78 (212)
|+|++|-.-. .+...++++.|.+.++.+-.++|+..+ .+ +.+..+ -..+++.+......+ .++..+++ .|+.
T Consensus 161 ilI~lGGsDp--k~lt~kvl~~L~~~~~nl~iV~gs~~p-~l-~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~A 234 (318)
T COG3980 161 ILITLGGSDP--KNLTLKVLAELEQKNVNLHIVVGSSNP-TL-KNLRKRAEKYPNINLYIDTNDMAELMKEADL--AISA 234 (318)
T ss_pred EEEEccCCCh--hhhHHHHHHHhhccCeeEEEEecCCCc-ch-hHHHHHHhhCCCeeeEecchhHHHHHHhcch--heec
Confidence 4677775432 345667888888877666666664331 11 222222 235677666666544 47777777 8888
Q ss_pred CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccch
Q 036598 79 CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEV 158 (212)
Q Consensus 79 gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 158 (212)
|| .|++|++..|+|.+++|+...|..-|..+ +.+|+-..+.- + +.++.....+.+++ +|
T Consensus 235 aG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~------~--------l~~~~~~~~~~~i~-~d---- 293 (318)
T COG3980 235 AG-STLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGY------H--------LKDLAKDYEILQIQ-KD---- 293 (318)
T ss_pred cc-hHHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccC------C--------CchHHHHHHHHHhh-hC----
Confidence 77 59999999999999999999999999999 65566555531 1 56667777777888 77
Q ss_pred HHHHHHHHHHH
Q 036598 159 EGMRKRARKLS 169 (212)
Q Consensus 159 ~~~~~~a~~l~ 169 (212)
...|.+.-..+
T Consensus 294 ~~~rk~l~~~~ 304 (318)
T COG3980 294 YARRKNLSFGS 304 (318)
T ss_pred HHHhhhhhhcc
Confidence 55555544333
No 67
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.80 E-value=0.00099 Score=59.40 Aligned_cols=96 Identities=19% Similarity=0.220 Sum_probs=64.7
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeec-------CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEe
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTH-------CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGV 120 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~h-------gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~ 120 (212)
.+++.+.+|+|+. .++..+++-++-++ -|. +++.||+++|+|+|+-...+ ....+ +.-..|+.+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~lv 352 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGWLV 352 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceEEe
Confidence 4678888999875 46777777332222 243 67999999999999875532 23344 442468777
Q ss_pred eccCCccccccchhccccCHHHHHHHHHHHhhc-CccchHHHHHHHHHH
Q 036598 121 GVESGLAWGEEEKIGVLVRRDRVEKVVYQFMIN-GGEEVEGMRKRARKL 168 (212)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~~~~~a~~l 168 (212)
.. -+.+++.++|.+++ + |++....|.+++++.
T Consensus 353 ~~---------------~d~~~la~ai~~l~-~~d~~~~~~~~~~ar~~ 385 (406)
T PRK15427 353 PE---------------NDAQALAQRLAAFS-QLDTDELAPVVKRAREK 385 (406)
T ss_pred CC---------------CCHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 54 46789999999999 8 755555555555443
No 68
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.77 E-value=0.00068 Score=57.05 Aligned_cols=89 Identities=19% Similarity=0.236 Sum_probs=57.7
Q ss_pred CCeEEeeccCh-hhhcCCCCccceeecCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcc
Q 036598 53 RGLIIKGWAPQ-VLILNHPAVGGFMTHCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLA 127 (212)
Q Consensus 53 ~~~~~~~~~p~-~~il~~~~~~~~v~hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 127 (212)
.++.+.+..+. ..+++.+++ +|.... .+++.||+++|+|+|+... ..+...+ .. .|..+..
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~-~~--~g~~~~~----- 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV-GD--TGFLVPP----- 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh-hc--CCEEeCC-----
Confidence 45555554433 457777777 665433 4799999999999998654 3344555 33 5666643
Q ss_pred ccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHH
Q 036598 128 WGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRAR 166 (212)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~ 166 (212)
-+.+++.+++.+++ +|.+....+.++++
T Consensus 317 ----------~~~~~l~~~i~~l~-~~~~~~~~~~~~~~ 344 (365)
T cd03807 317 ----------GDPEALAEAIEALL-ADPALRQALGEAAR 344 (365)
T ss_pred ----------CCHHHHHHHHHHHH-hChHHHHHHHHHHH
Confidence 36788999999999 87444444444443
No 69
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.77 E-value=0.001 Score=57.24 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=64.2
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceee--cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccc
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMT--HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAW 128 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~--hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 128 (212)
..++.+.++.++ ..+++.+++-++-+ -|...++.||+++|+|+|+.+.. .....+ +.-..|..+..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~~~------ 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLVDV------ 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEcCC------
Confidence 346777777665 35777777732222 23346999999999999986543 344455 43256776643
Q ss_pred cccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 129 GEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 129 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
-+.+++.+++.+++ +|++....|++++++.
T Consensus 321 ---------~~~~~l~~~i~~l~-~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 321 ---------GDVEAMAEYALSLL-EDDELWQEFSRAARNR 350 (371)
T ss_pred ---------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 36688999999999 8866666666666665
No 70
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.72 E-value=0.0002 Score=54.03 Aligned_cols=107 Identities=17% Similarity=0.121 Sum_probs=65.7
Q ss_pred CEEeeCCCCCCCHHHHHH--HHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeec--cCh-hhhcCCCCccce
Q 036598 1 LYVCFGSLCEFAESQLLE--IALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGW--APQ-VLILNHPAVGGF 75 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~--~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~--~p~-~~il~~~~~~~~ 75 (212)
+||+-||....=...+.. +..-......++|.++|..+. .| -.++.+.+| .+- ..+...++ ++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--kp--------vagl~v~~F~~~~kiQsli~dar--IV 69 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI--KP--------VAGLRVYGFDKEEKIQSLIHDAR--IV 69 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc--cc--------ccccEEEeechHHHHHHHhhcce--EE
Confidence 689999995421122222 222222235688899887541 11 123444444 333 34555455 59
Q ss_pred eecCChhhHHHHHHcCCCeeccCcc--------cchhhHHHHHHHHhcceeEe
Q 036598 76 MTHCGWNSVLESVSSGVPMITWPLF--------AEQFYNENFVLTHWKIGVGV 120 (212)
Q Consensus 76 v~hgG~~sv~eal~~GvP~i~iP~~--------~DQ~~na~~v~~~~g~G~~~ 120 (212)
|+|+|.||++.++..++|.|++|-. .+|..-|..+++ ++.=+..
T Consensus 70 ISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~ 121 (161)
T COG5017 70 ISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVAC 121 (161)
T ss_pred EeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEE
Confidence 9999999999999999999999963 356777777733 4544444
No 71
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.69 E-value=0.001 Score=56.49 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=63.9
Q ss_pred CCCeEEee-ccChh---hhcCCCCccceeec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeecc
Q 036598 52 DRGLIIKG-WAPQV---LILNHPAVGGFMTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVE 123 (212)
Q Consensus 52 ~~~~~~~~-~~p~~---~il~~~~~~~~v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~ 123 (212)
..++.+.+ |+|+. .++..+++-++-++ |-.+++.||+++|+|+|..+..+ ...+ ...+.|..+..
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~~- 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVPP- 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEcC-
Confidence 45677665 47753 46777777333333 33568999999999999987644 2333 22367777754
Q ss_pred CCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHH
Q 036598 124 SGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSE 170 (212)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~ 170 (212)
-+.+++.+++.+++ +|.+...++++++++..+
T Consensus 319 --------------~d~~~~~~~l~~l~-~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 319 --------------GDPAALAEAIRRLL-ADPELAQALRARAREYAR 350 (366)
T ss_pred --------------CCHHHHHHHHHHHH-cChHHHHHHHHHHHHHHh
Confidence 35788999999999 875555556665555443
No 72
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.68 E-value=0.0031 Score=55.81 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=66.6
Q ss_pred CCeEEeeccChh---hhcCCCCccceeecCCh------hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeecc
Q 036598 53 RGLIIKGWAPQV---LILNHPAVGGFMTHCGW------NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVE 123 (212)
Q Consensus 53 ~~~~~~~~~p~~---~il~~~~~~~~v~hgG~------~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~ 123 (212)
+++.+.+++|+. .+++.+++.++.+..+. +.+.|++++|+|+|+.+..+.. ....+ + +.|+.+..
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEP- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCC-
Confidence 478888888764 46788888655555432 3478999999999998653311 12233 3 67888854
Q ss_pred CCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHH
Q 036598 124 SGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSE 170 (212)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~ 170 (212)
-+.+++.++|.+++ +|.+..+.|++++++...
T Consensus 358 --------------~d~~~la~~i~~l~-~~~~~~~~~~~~a~~~~~ 389 (412)
T PRK10307 358 --------------ESVEALVAAIAALA-RQALLRPKLGTVAREYAE 389 (412)
T ss_pred --------------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHH
Confidence 46688999999999 875555666666665443
No 73
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.61 E-value=0.0025 Score=55.33 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=59.6
Q ss_pred CCeEEeeccCh-hhhcCCCCcccee--ec--CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcc
Q 036598 53 RGLIIKGWAPQ-VLILNHPAVGGFM--TH--CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLA 127 (212)
Q Consensus 53 ~~~~~~~~~p~-~~il~~~~~~~~v--~h--gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 127 (212)
.++.+.++..+ ..++..+++ +| ++ |-..++.||+++|+|+|+-+..+ +...+ +.-..|..+..
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i-~~~~~g~~~~~----- 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELV-QHGVTGALVPP----- 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHh-cCCCceEEeCC-----
Confidence 34555444433 457878887 55 33 33579999999999999976532 34444 43246777754
Q ss_pred ccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHH
Q 036598 128 WGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~ 167 (212)
-+.+++.+++.+++ +|.+....+.+++++
T Consensus 323 ----------~d~~~la~~i~~l~-~~~~~~~~~~~~a~~ 351 (374)
T TIGR03088 323 ----------GDAVALARALQPYV-SDPAARRAHGAAGRA 351 (374)
T ss_pred ----------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 36688999999999 874444444444444
No 74
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.61 E-value=0.00041 Score=60.07 Aligned_cols=128 Identities=14% Similarity=0.113 Sum_probs=73.1
Q ss_pred EEeeCCCCCC-CHHHHHHHHHHHhhCC---ceEEEEEeCCcccccchhHHHhhc-CCCeEEeeccCh---hhhcCCCCcc
Q 036598 2 YVCFGSLCEF-AESQLLEIALGLESSN---ICFIWVIKSDAFLLLDKDFEERVK-DRGLIIKGWAPQ---VLILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~~-~~~~~~~~~~~l~~~~---~~viw~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~p~---~~il~~~~~~ 73 (212)
++++|..... ..+.+..+++++.... ..+++.........+.+...+... .+++.+.++.+. ..++..+++
T Consensus 202 lv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~- 280 (363)
T cd03786 202 LVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADL- 280 (363)
T ss_pred EEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcE-
Confidence 3455555432 3455666777765532 344332221111122111111111 356766655443 245666777
Q ss_pred ceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhc
Q 036598 74 GFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMIN 153 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 153 (212)
||+..| +.+.|+++.|+|+|+++.. |. +..+.+ .|+++.+. -+.++|.+++.+++ +
T Consensus 281 -~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~----------------~~~~~i~~~i~~ll-~ 336 (363)
T cd03786 281 -VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVG----------------TDPEAILAAIEKLL-S 336 (363)
T ss_pred -EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecC----------------CCHHHHHHHHHHHh-c
Confidence 999998 7788999999999998743 32 223323 36665552 24678999999999 8
Q ss_pred C
Q 036598 154 G 154 (212)
Q Consensus 154 ~ 154 (212)
+
T Consensus 337 ~ 337 (363)
T cd03786 337 D 337 (363)
T ss_pred C
Confidence 7
No 75
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.60 E-value=0.0024 Score=56.33 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=81.3
Q ss_pred EEeeCCCCCC-CHHHHH----HHHHHHhh--CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh-hhcCCCCcc
Q 036598 2 YVCFGSLCEF-AESQLL----EIALGLES--SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV-LILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~~-~~~~~~----~~~~~l~~--~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~-~il~~~~~~ 73 (212)
++..|++... ..+.+. .++..+.+ ++..++ .+|.... +.+.+....+++.+.+++++. .+++.+++-
T Consensus 227 ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~-ivG~g~~----~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~ 301 (397)
T TIGR03087 227 LVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFY-IVGAKPS----PAVRALAALPGVTVTGSVADVRPYLAHAAVA 301 (397)
T ss_pred EEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEE-EECCCCh----HHHHHhccCCCeEEeeecCCHHHHHHhCCEE
Confidence 4556776652 222232 22222322 456654 4554321 222222345678888888863 577788873
Q ss_pred ceeec--CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHH
Q 036598 74 GFMTH--CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQF 150 (212)
Q Consensus 74 ~~v~h--gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 150 (212)
++-++ .|. +.+.||+++|+|+|+.+...+.. . ...|.|+.+. -+.+++.+++.++
T Consensus 302 v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~-~~~~~g~lv~----------------~~~~~la~ai~~l 359 (397)
T TIGR03087 302 VAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----D-ALPGAELLVA----------------ADPADFAAAILAL 359 (397)
T ss_pred EecccccCCcccHHHHHHHcCCCEEecCcccccc-----c-ccCCcceEeC----------------CCHHHHHHHHHHH
Confidence 32233 343 46999999999999987643221 1 2225677663 3678999999999
Q ss_pred hhcCccchHHHHHHHHHH
Q 036598 151 MINGGEEVEGMRKRARKL 168 (212)
Q Consensus 151 l~~~~~~~~~~~~~a~~l 168 (212)
+ +|++..+.|.+++++.
T Consensus 360 l-~~~~~~~~~~~~ar~~ 376 (397)
T TIGR03087 360 L-ANPAEREELGQAARRR 376 (397)
T ss_pred H-cCHHHHHHHHHHHHHH
Confidence 9 8854455555555543
No 76
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.60 E-value=0.0013 Score=54.84 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=56.7
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceeec--CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccc
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMTH--CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAW 128 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~h--gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 128 (212)
.+++.+.++.+. ..++..+++-++-++ |..+++.||+++|+|+|+.... .....+ +.-..|+....
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~------ 313 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVPV------ 313 (353)
T ss_pred CccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEECC------
Confidence 456777777665 357777777333222 3357899999999999986553 444555 54477888755
Q ss_pred cccchhccccCHHHH---HHHHHHHhhcCccchHHHHH
Q 036598 129 GEEEKIGVLVRRDRV---EKVVYQFMINGGEEVEGMRK 163 (212)
Q Consensus 129 ~~~~~~~~~~~~~~l---~~ai~~vl~~~~~~~~~~~~ 163 (212)
-+.+.+ ..++...+ .+.+....++.
T Consensus 314 ---------~~~~~~~~~~~~i~~~~-~~~~~~~~~~~ 341 (353)
T cd03811 314 ---------GDEAALAAAALALLDLL-LDPELRERLAA 341 (353)
T ss_pred ---------CCHHHHHHHHHHHHhcc-CChHHHHHHHH
Confidence 344555 55666666 65333333444
No 77
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.60 E-value=0.0016 Score=58.16 Aligned_cols=92 Identities=15% Similarity=0.324 Sum_probs=63.8
Q ss_pred CCeEEe-eccChh---hhcCCCCccceee----cCC---hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEee
Q 036598 53 RGLIIK-GWAPQV---LILNHPAVGGFMT----HCG---WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVG 121 (212)
Q Consensus 53 ~~~~~~-~~~p~~---~il~~~~~~~~v~----hgG---~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~ 121 (212)
.++.+. +|+|.. .+|+.+++ +|. .-| .+++.|++++|+|+|+... ......+ +.-+.|+.+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv-~~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELV-KHGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHh-cCCCCEEEEC
Confidence 345443 577643 46777887 552 112 4579999999999998654 2344555 5446788872
Q ss_pred ccCCccccccchhccccCHHHHHHHHHHHhhcC---ccchHHHHHHHHHHH
Q 036598 122 VESGLAWGEEEKIGVLVRRDRVEKVVYQFMING---GEEVEGMRKRARKLS 169 (212)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~---~~~~~~~~~~a~~l~ 169 (212)
+.+++.+++.+++ +| ++..+.|.+++++.+
T Consensus 367 -----------------d~~~la~~i~~ll-~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 -----------------DSEELAEQLIDLL-SNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred -----------------CHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHhh
Confidence 5688999999999 87 677788888877766
No 78
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.57 E-value=0.0016 Score=56.74 Aligned_cols=112 Identities=12% Similarity=0.168 Sum_probs=69.0
Q ss_pred HHHHHHHHhh-----CCceEEEEEeCCcccccchhHHHhh-cCCCeEEeeccChh---hhcCCCCccceeecCChhhHHH
Q 036598 16 LLEIALGLES-----SNICFIWVIKSDAFLLLDKDFEERV-KDRGLIIKGWAPQV---LILNHPAVGGFMTHCGWNSVLE 86 (212)
Q Consensus 16 ~~~~~~~l~~-----~~~~viw~~~~~~~~~lp~~~~~~~-~~~~~~~~~~~p~~---~il~~~~~~~~v~hgG~~sv~e 86 (212)
+..+++++.. .+..+++..+++.. ....+.+.. ..+++.+.+.++.. .+++++++ +|+..|. .+.|
T Consensus 214 ~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~E 288 (365)
T TIGR00236 214 LENIFKAIREIVEEFEDVQIVYPVHLNPV--VREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEE 288 (365)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCChH--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCE--EEECChh-HHHH
Confidence 4555555543 25666665443221 111121111 23567777766543 45666666 8887764 4799
Q ss_pred HHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 87 SVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 87 al~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|+++|+|+|.++...+++. .+ + .|.++.+. .+.++|.+++.+++ +|
T Consensus 289 A~a~g~PvI~~~~~~~~~e---~~-~-~g~~~lv~----------------~d~~~i~~ai~~ll-~~ 334 (365)
T TIGR00236 289 APSLGKPVLVLRDTTERPE---TV-E-AGTNKLVG----------------TDKENITKAAKRLL-TD 334 (365)
T ss_pred HHHcCCCEEECCCCCCChH---HH-h-cCceEEeC----------------CCHHHHHHHHHHHH-hC
Confidence 9999999999976555542 22 3 37776652 36788999999999 87
No 79
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.55 E-value=0.00046 Score=60.49 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=61.3
Q ss_pred hhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcc--cchhhHHHHHHH--HhcceeEeec----cCCccccccchhc
Q 036598 64 VLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLF--AEQFYNENFVLT--HWKIGVGVGV----ESGLAWGEEEKIG 135 (212)
Q Consensus 64 ~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~--~DQ~~na~~v~~--~~g~G~~~~~----~~~~~~~~~~~~~ 135 (212)
..++..+++ +|+.+|..|+ |++..|+|+|+ |+- .-|.+||++++. ..|+...+-. .+..-.-. .
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEll----Q 301 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELL----Q 301 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhh----c
Confidence 457877777 9999999999 99999999998 663 467889999841 4455544422 11000000 0
Q ss_pred cccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHH
Q 036598 136 VLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELA 172 (212)
Q Consensus 136 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~ 172 (212)
..++++.|.+++.+ . +. +.+++...++.+.+
T Consensus 302 ~~~t~~~la~~i~~-~-~~----~~~~~~~~~l~~~l 332 (347)
T PRK14089 302 EFVTVENLLKAYKE-M-DR----EKFFKKSKELREYL 332 (347)
T ss_pred ccCCHHHHHHHHHH-H-HH----HHHHHHHHHHHHHh
Confidence 12778888887766 3 22 45666655555554
No 80
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.45 E-value=0.0031 Score=55.43 Aligned_cols=94 Identities=11% Similarity=0.005 Sum_probs=64.9
Q ss_pred CCCeEEeeccChh---hhcCCCCccceee---c-CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMT---H-CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~---h-gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
.+++.+.+++++. .+++.+++ +|. + |...++.||+++|+|+|+....+ ....+ +.-..|+.+..
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i-~~~~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAV-ADGETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhh-ccCCceEECCC--
Confidence 4578888888753 46888887 542 2 22468999999999999876532 23344 44356777743
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
-+.+++.+++.+++ +|++..+.|++++++.
T Consensus 353 -------------~d~~~la~~i~~~l-~~~~~~~~~~~~~~~~ 382 (405)
T TIGR03449 353 -------------HDPADWADALARLL-DDPRTRIRMGAAAVEH 382 (405)
T ss_pred -------------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 46788999999999 8755556666666554
No 81
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.40 E-value=0.0014 Score=55.66 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=79.0
Q ss_pred EEeeCCCCCC-CHHHHHHHHHHHhhC--CceEEEEEeCCc--ccccchhHHHhhcCCCeEEeeccChh---hhcCCCCcc
Q 036598 2 YVCFGSLCEF-AESQLLEIALGLESS--NICFIWVIKSDA--FLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~viw~~~~~~--~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~ 73 (212)
++..|+.... ....+.+.+..+... +..+++. |... ...............++.+.+++|+. .+++.+++-
T Consensus 198 i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~ 276 (365)
T cd03809 198 FLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIV-GKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAF 276 (365)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEe-cCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhh
Confidence 4566766542 334444444444433 2555543 4322 11111111112245678888898764 467777773
Q ss_pred ceeec--CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 74 GFMTH--CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 74 ~~v~h--gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
++-+. |..+++.||+++|+|+|+-...+ ....+ . ..|..+.. -+.+++.+++.+++
T Consensus 277 l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~---------------~~~~~~~~~i~~l~ 334 (365)
T cd03809 277 VFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP---------------LDPEALAAAIERLL 334 (365)
T ss_pred cccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC---------------CCHHHHHHHHHHHh
Confidence 33222 23468999999999999865521 11122 2 23444533 46788999999999
Q ss_pred hcCccchHHHHHHHHH
Q 036598 152 INGGEEVEGMRKRARK 167 (212)
Q Consensus 152 ~~~~~~~~~~~~~a~~ 167 (212)
+|.+....+.+++++
T Consensus 335 -~~~~~~~~~~~~~~~ 349 (365)
T cd03809 335 -EDPALREELRERGLA 349 (365)
T ss_pred -cCHHHHHHHHHHHHH
Confidence 885555555555553
No 82
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.38 E-value=0.0066 Score=51.77 Aligned_cols=148 Identities=12% Similarity=0.057 Sum_probs=82.7
Q ss_pred EEeeCCCCCC-CHHHHHHHHHHHhh--CCceEEEEEeCCc-ccccchhHH----HhhcCCCeEEeeccCh-hhhcCCCCc
Q 036598 2 YVCFGSLCEF-AESQLLEIALGLES--SNICFIWVIKSDA-FLLLDKDFE----ERVKDRGLIIKGWAPQ-VLILNHPAV 72 (212)
Q Consensus 2 ~vs~GS~~~~-~~~~~~~~~~~l~~--~~~~viw~~~~~~-~~~lp~~~~----~~~~~~~~~~~~~~p~-~~il~~~~~ 72 (212)
++..|.+... ....+.+++..+.. .+..+++ +|... ...+...+. +....+++.+.++.+. ..++..+++
T Consensus 188 i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~ 266 (355)
T cd03819 188 ILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADI 266 (355)
T ss_pred EEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCE
Confidence 3445555432 33445555555554 3455444 44332 111211111 1112456777777544 357777887
Q ss_pred cceeec--CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH
Q 036598 73 GGFMTH--CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ 149 (212)
Q Consensus 73 ~~~v~h--gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 149 (212)
-++-++ -| .+++.||+++|+|+|+.... .....+ ..-+.|..+.. -+.+++.+++..
T Consensus 267 ~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~---------------~~~~~l~~~i~~ 326 (355)
T cd03819 267 VVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV-RPGETGLLVPP---------------GDAEALAQALDQ 326 (355)
T ss_pred EEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH-hCCCceEEeCC---------------CCHHHHHHHHHH
Confidence 333331 23 46999999999999986542 233444 44347887754 467889999965
Q ss_pred HhhcCccchHHHHHHHHHHHH
Q 036598 150 FMINGGEEVEGMRKRARKLSE 170 (212)
Q Consensus 150 vl~~~~~~~~~~~~~a~~l~~ 170 (212)
.+..+.++...+++++++..+
T Consensus 327 ~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 327 ILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred HHhhCHHHHHHHHHHHHHHHH
Confidence 551455555666666666554
No 83
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.37 E-value=0.004 Score=54.22 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=63.4
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeecC---C-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTHC---G-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~hg---G-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
.+++.+.+++|+. .++..+++ ++... | ..++.||+++|+|+|+.-..+ ....+ ..-+.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i-~~~~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV-VDGETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh-ccCCceEEeC---
Confidence 4678888999865 46777777 55321 1 368899999999999864422 23344 3325677663
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
.+.+++.+++.+++ ++++....+.+++++.
T Consensus 349 -------------~~~~~~a~~i~~l~-~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 349 -------------PTPEEFAEAMLKLA-NDPDLADRMGAAGRKR 378 (392)
T ss_pred -------------CCHHHHHHHHHHHH-hChHHHHHHHHHHHHH
Confidence 35688999999999 8765566666666554
No 84
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.37 E-value=0.003 Score=53.82 Aligned_cols=128 Identities=14% Similarity=0.094 Sum_probs=70.4
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhh--CCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccCh-hhhcCCCCccceee
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLES--SNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQ-VLILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~-~~il~~~~~~~~v~ 77 (212)
++..|++.. -..+.+.+.+..+.. .+..+++.-.....+.+.+...+.....++.+.++..+ ..++..+++ +|.
T Consensus 191 ~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~ 268 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADL--FVL 268 (360)
T ss_pred EEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhce--EEe
Confidence 455565543 122233333333332 35777765332221111111111122456777776654 457877777 444
Q ss_pred cC----ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhc
Q 036598 78 HC----GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMIN 153 (212)
Q Consensus 78 hg----G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 153 (212)
-. ..+++.||+++|+|+|+... ..+...+ +. .|..+.. -+.+++.+++.+++ +
T Consensus 269 ~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~--~g~~~~~---------------~~~~~~~~~i~~ll-~ 325 (360)
T cd04951 269 SSAWEGFGLVVAEAMACELPVVATDA----GGVREVV-GD--SGLIVPI---------------SDPEALANKIDEIL-K 325 (360)
T ss_pred cccccCCChHHHHHHHcCCCEEEecC----CChhhEe-cC--CceEeCC---------------CCHHHHHHHHHHHH-h
Confidence 32 25789999999999997543 4444445 32 4555533 46788999999998 5
Q ss_pred C
Q 036598 154 G 154 (212)
Q Consensus 154 ~ 154 (212)
+
T Consensus 326 ~ 326 (360)
T cd04951 326 M 326 (360)
T ss_pred C
Confidence 3
No 85
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.34 E-value=0.0029 Score=54.02 Aligned_cols=89 Identities=13% Similarity=0.055 Sum_probs=58.7
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceeec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
..++.+.++..+ ..++..+++ +|.- |-.+++.||+++|+|+|+-.... ....+ +. +.|.....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~---- 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD---- 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC----
Confidence 456777776444 457777777 4432 34579999999999999865533 23344 43 55555532
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHH
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKR 164 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~ 164 (212)
-+++++.++|.+++ +|++..+.+..+
T Consensus 316 -----------~~~~~~a~~i~~l~-~~~~~~~~~~~~ 341 (358)
T cd03812 316 -----------ESPEIWAEEILKLK-SEDRRERSSESI 341 (358)
T ss_pred -----------CCHHHHHHHHHHHH-hCcchhhhhhhh
Confidence 35689999999999 885544444333
No 86
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.33 E-value=0.0077 Score=52.35 Aligned_cols=97 Identities=19% Similarity=0.150 Sum_probs=60.4
Q ss_pred eEE-eeccCh---hhhcCCCCccceeec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 55 LII-KGWAPQ---VLILNHPAVGGFMTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 55 ~~~-~~~~p~---~~il~~~~~~~~v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
+.+ ..+++. ..++.++++ +|.- +-..++.||+++|+|+|+.... .....+ +.-..|..+...++
T Consensus 262 v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i-~~~~~G~~~~~~~~- 333 (388)
T TIGR02149 262 IIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV-VDGETGFLVPPDNS- 333 (388)
T ss_pred eEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh-hCCCceEEcCCCCC-
Confidence 443 345664 346777787 5542 2246789999999999987642 344555 44357888865330
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
...-..+++.+++.+++ +|.+..+.+.+++++.
T Consensus 334 --------~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~a~~~ 366 (388)
T TIGR02149 334 --------DADGFQAELAKAINILL-ADPELAKKMGIAGRKR 366 (388)
T ss_pred --------cccchHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 00012378999999999 8855555565555543
No 87
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.31 E-value=0.0097 Score=52.97 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=75.0
Q ss_pred CeEEeeccChh-hhcCCCCccc----eeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccc
Q 036598 54 GLIIKGWAPQV-LILNHPAVGG----FMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAW 128 (212)
Q Consensus 54 ~~~~~~~~p~~-~il~~~~~~~----~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 128 (212)
++.+.+-+.-+ .+++-+++.. ++.+||.| ..|.+++|+|+|.=|+..-|..-++++ ...|.|+.++
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~------- 371 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE------- 371 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC-------
Confidence 56666666543 3444455422 46789887 579999999999999999999999999 5459999884
Q ss_pred cccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHH
Q 036598 129 GEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAK 173 (212)
Q Consensus 129 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~ 173 (212)
+.+.+.+++..++ +|.++.+.|.+++..+-...+
T Consensus 372 ----------~~~~l~~~v~~l~-~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 372 ----------DADLLAKAVELLL-ADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred ----------CHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhh
Confidence 3566888888888 877777777777777766655
No 88
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.31 E-value=0.0062 Score=51.99 Aligned_cols=94 Identities=18% Similarity=0.189 Sum_probs=62.0
Q ss_pred CCCeEEeeccC-hh---hhcCCCCccceeecC----ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeecc
Q 036598 52 DRGLIIKGWAP-QV---LILNHPAVGGFMTHC----GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVE 123 (212)
Q Consensus 52 ~~~~~~~~~~p-~~---~il~~~~~~~~v~hg----G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~ 123 (212)
..++.+.++++ +. .+++.+++ ++... ..+++.||+++|+|+|+.... .....+ ..-+.|+.+..
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEeCC-
Confidence 34577778887 32 46777777 66643 357999999999999986542 222233 33246776643
Q ss_pred CCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 124 SGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
.+.+++.+++.+++ +|++....+.+++++.
T Consensus 315 --------------~~~~~~~~~l~~l~-~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 315 --------------GDPEDLAEGIEWLL-ADPDEREELGEAAREL 344 (365)
T ss_pred --------------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 46788999999999 8754444555555443
No 89
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.25 E-value=0.0012 Score=57.77 Aligned_cols=112 Identities=13% Similarity=0.163 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhhC-CceEEEEEeCCc--ccccchhHHHhhcCCCeEEeeccCh---hhhcCCCCccceeecCChhhHH-H
Q 036598 14 SQLLEIALGLESS-NICFIWVIKSDA--FLLLDKDFEERVKDRGLIIKGWAPQ---VLILNHPAVGGFMTHCGWNSVL-E 86 (212)
Q Consensus 14 ~~~~~~~~~l~~~-~~~viw~~~~~~--~~~lp~~~~~~~~~~~~~~~~~~p~---~~il~~~~~~~~v~hgG~~sv~-e 86 (212)
..+..++++|... ++++||.+.... ...+-+.+. ..+++.+.+.+++ ..+|.++++ +|+..| +++ |
T Consensus 200 ~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~---~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eE 272 (346)
T PF02350_consen 200 EQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLK---KYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEE 272 (346)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHT---T-TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhc---ccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHH
Confidence 3466666777665 899999988442 111111111 1147877766654 567788888 999998 666 9
Q ss_pred HHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 87 SVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 87 al~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
|.+.|+|.|.+ .|+-..-.-+ . .|..+.+. .+.++|.+++++++ ++
T Consensus 273 a~~lg~P~v~i---R~~geRqe~r-~-~~~nvlv~----------------~~~~~I~~ai~~~l-~~ 318 (346)
T PF02350_consen 273 APSLGKPVVNI---RDSGERQEGR-E-RGSNVLVG----------------TDPEAIIQAIEKAL-SD 318 (346)
T ss_dssp GGGGT--EEEC---SSS-S-HHHH-H-TTSEEEET----------------SSHHHHHHHHHHHH-H-
T ss_pred HHHhCCeEEEe---cCCCCCHHHH-h-hcceEEeC----------------CCHHHHHHHHHHHH-hC
Confidence 99999999999 3332222222 2 26666642 57899999999999 64
No 90
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.17 E-value=0.039 Score=48.64 Aligned_cols=81 Identities=12% Similarity=0.138 Sum_probs=55.5
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeec----CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeecc
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTH----CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVE 123 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~h----gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~ 123 (212)
..++.+.+++++. .+++.+++ +|.. .|. .++.||+++|+|+|+....+ +...+ +.-..|..+...
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv-~~~~~G~~l~~~ 328 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFV-LEGITGYHLAEP 328 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhc-ccCCceEEEeCC
Confidence 3567777888753 46777787 5542 332 67899999999999976532 33444 432467654221
Q ss_pred CCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 124 SGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
.+.+++.+++.+++ +|
T Consensus 329 --------------~d~~~la~~I~~ll-~d 344 (380)
T PRK15484 329 --------------MTSDSIISDINRTL-AD 344 (380)
T ss_pred --------------CCHHHHHHHHHHHH-cC
Confidence 47889999999999 87
No 91
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.11 E-value=0.014 Score=53.13 Aligned_cols=93 Identities=14% Similarity=0.199 Sum_probs=61.9
Q ss_pred CCCeEEeeccChhhhcCCCCccceeec----CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHh------cceeEee
Q 036598 52 DRGLIIKGWAPQVLILNHPAVGGFMTH----CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHW------KIGVGVG 121 (212)
Q Consensus 52 ~~~~~~~~~~p~~~il~~~~~~~~v~h----gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~------g~G~~~~ 121 (212)
.+++.+.+..+-..+++.+++ +|.. |-.+++.||+++|+|+|.-.. ......+ +.. ..|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEEC
Confidence 467777665445567777776 5433 334799999999999998543 2333344 321 2677775
Q ss_pred ccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHH
Q 036598 122 VESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~ 167 (212)
. .+.+++.+++.+++ +|++..+.+.+++++
T Consensus 426 ~---------------~d~~~la~ai~~ll-~~~~~~~~~~~~a~~ 455 (475)
T cd03813 426 P---------------ADPEALARAILRLL-KDPELRRAMGEAGRK 455 (475)
T ss_pred C---------------CCHHHHHHHHHHHh-cCHHHHHHHHHHHHH
Confidence 4 46789999999999 885555555555544
No 92
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.10 E-value=0.013 Score=51.60 Aligned_cols=78 Identities=9% Similarity=0.132 Sum_probs=52.0
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeec---CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTH---CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~h---gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
.+++.+.+++|+. .+++.+++ +|.- -|. .++.||+++|+|+|+-+..+ ....+ +. |.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~--- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE--- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC---
Confidence 4567788888753 46777777 5432 233 49999999999999977643 22333 33 4343331
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
.+.+++.+++.+++ ++
T Consensus 318 -------------~~~~~l~~~l~~~l-~~ 333 (398)
T cd03796 318 -------------PDVESIVRKLEEAI-SI 333 (398)
T ss_pred -------------CCHHHHHHHHHHHH-hC
Confidence 36688999999998 65
No 93
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.07 E-value=0.0081 Score=52.92 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=64.7
Q ss_pred CCCeEEeeccChhh---hcCCCCccceeec-CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 52 DRGLIIKGWAPQVL---ILNHPAVGGFMTH-CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 52 ~~~~~~~~~~p~~~---il~~~~~~~~v~h-gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
.+++.+.+++|+.. +++.+++-++.+. .| ..++.||+++|+|+|.... ......+ ..-..|..+..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcCC----
Confidence 46788889998654 5677777333333 22 2489999999999998644 3344445 43246777743
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHH
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLS 169 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~ 169 (212)
-+.+++.++|.+++ +|++....|.+++++..
T Consensus 351 -----------~d~~~la~~i~~ll-~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 351 -----------FDPDALAAAVIELL-DDPARRARLRRAARRTA 381 (396)
T ss_pred -----------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHH
Confidence 46789999999999 88545555555554433
No 94
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.03 E-value=0.0018 Score=47.92 Aligned_cols=80 Identities=24% Similarity=0.292 Sum_probs=48.5
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceeec--CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcc
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMTH--CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLA 127 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~h--gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 127 (212)
.+++.+.++++. ..+++.+++.+..+. .| .+++.|++++|+|+|+.+.... ... +..+.|..+ .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~~~-----~~~-~~~~~~~~~-~----- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNGAE-----GIV-EEDGCGVLV-A----- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHHCH-----CHS----SEEEE--T-----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcchh-----hhe-eecCCeEEE-C-----
Confidence 468999898864 347888888666543 22 4899999999999999876111 122 324777766 2
Q ss_pred ccccchhccccCHHHHHHHHHHHhhcC
Q 036598 128 WGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
-+++++.+++.+++ +|
T Consensus 120 ----------~~~~~l~~~i~~l~-~d 135 (135)
T PF13692_consen 120 ----------NDPEELAEAIERLL-ND 135 (135)
T ss_dssp ----------T-HHHHHHHHHHHH-H-
T ss_pred ----------CCHHHHHHHHHHHh-cC
Confidence 47889999999988 54
No 95
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.02 E-value=0.011 Score=54.33 Aligned_cols=103 Identities=15% Similarity=0.249 Sum_probs=65.1
Q ss_pred CCCeEEeeccChhhhcCCCCccceeec---CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeecc-CCc
Q 036598 52 DRGLIIKGWAPQVLILNHPAVGGFMTH---CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVE-SGL 126 (212)
Q Consensus 52 ~~~~~~~~~~p~~~il~~~~~~~~v~h---gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~-~~~ 126 (212)
.+++.+.++.+...++..+++ +|.- -| ..++.||+++|+|+|+..... -+...+ +.-..|..+... ++.
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCcccc
Confidence 456777778777778888887 5542 23 469999999999999865421 123344 432468887521 100
Q ss_pred cccccchhccccC-HHHHHHHHHHHhhcCccchHHHHHHHHHHHHH
Q 036598 127 AWGEEEKIGVLVR-RDRVEKVVYQFMINGGEEVEGMRKRARKLSEL 171 (212)
Q Consensus 127 ~~~~~~~~~~~~~-~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~ 171 (212)
.+ -. .+++.++|.+++ ++ +....|.+++.+.++.
T Consensus 449 --------d~-~~~~~~la~~I~~ll-~~-~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 449 --------DE-DQIITALAEKIVEYF-NS-NDIDAFHEYSYQIAEG 483 (500)
T ss_pred --------ch-hHHHHHHHHHHHHHh-Ch-HHHHHHHHHHHHHHHh
Confidence 00 11 678999999999 74 3455677777665444
No 96
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.95 E-value=0.034 Score=47.39 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=72.1
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhC--CceEEEEEeCC-cccccchhHH-HhhcCCCeEEeeccChhh---hcCCCCccc
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESS--NICFIWVIKSD-AFLLLDKDFE-ERVKDRGLIIKGWAPQVL---ILNHPAVGG 74 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~--~~~viw~~~~~-~~~~lp~~~~-~~~~~~~~~~~~~~p~~~---il~~~~~~~ 74 (212)
++.+|++.. .+.+..+++++... +.+++ .+|.. ....+.+.+. .....+++.+.+++++.. .+..+++
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~-ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~-- 270 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLV-IVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL-- 270 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEE-EEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE--
Confidence 345566554 22233444555433 45654 44443 2111112222 122356788889988753 5555665
Q ss_pred eeecC----C-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH
Q 036598 75 FMTHC----G-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ 149 (212)
Q Consensus 75 ~v~hg----G-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 149 (212)
++.+. | .+++.||+++|+|+|+..... +...+ +. .|..... .+.+.+++.+
T Consensus 271 ~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~-----------------~~~l~~~i~~ 326 (363)
T cd04955 271 FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKV-----------------GDDLASLLEE 326 (363)
T ss_pred EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecC-----------------chHHHHHHHH
Confidence 44433 2 258999999999999875532 11222 21 3444422 1129999999
Q ss_pred HhhcCccchHHHHHHHHH
Q 036598 150 FMINGGEEVEGMRKRARK 167 (212)
Q Consensus 150 vl~~~~~~~~~~~~~a~~ 167 (212)
++ +|.+....+.+++++
T Consensus 327 l~-~~~~~~~~~~~~~~~ 343 (363)
T cd04955 327 LE-ADPEEVSAMAKAARE 343 (363)
T ss_pred HH-hCHHHHHHHHHHHHH
Confidence 99 874444444444443
No 97
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.76 E-value=0.017 Score=53.84 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=70.5
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHh-----hcCCCeEEeeccC-----hhhhcCCCC
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEER-----VKDRGLIIKGWAP-----QVLILNHPA 71 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~-----~~~~~~~~~~~~p-----~~~il~~~~ 71 (212)
|.+|--....+++.+...+.-|.+.+-.++|....+.... ..++.. ..++.+.+.+-+. +...|+.--
T Consensus 762 f~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~ 839 (966)
T KOG4626|consen 762 FCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVC 839 (966)
T ss_pred EeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--HHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhc
Confidence 3344444447888888888889999999999988764111 122211 1234444433222 112232222
Q ss_pred ccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 72 VGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
++-++|. |..|-.+.|+.|+|||.+|.-.---..|..+...+|+|-.+.+
T Consensus 840 LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak 889 (966)
T KOG4626|consen 840 LDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK 889 (966)
T ss_pred ccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh
Confidence 2235665 6789999999999999999854333333333355788887643
No 98
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.60 E-value=0.077 Score=50.75 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=60.4
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceee---cCC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMT---HCG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~---hgG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
.+++.+.+|.++ ..++..+++ ||. +.| .+++.||+++|+|+|..... -....+ ..-..|+.+...+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~d-- 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPADT-- 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCCC--
Confidence 467888788765 347777777 543 344 47999999999999997653 233445 4424688886543
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHH
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~ 167 (212)
.+.+++.+++.+++ .+...-+.+++++++
T Consensus 644 -----------~~~~~La~aL~~ll-~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 644 -----------VTAPDVAEALARIH-DMCAADPGIARKAAD 672 (694)
T ss_pred -----------CChHHHHHHHHHHH-hChhccHHHHHHHHH
Confidence 45567777777666 432112556655444
No 99
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.60 E-value=0.015 Score=50.30 Aligned_cols=96 Identities=19% Similarity=0.337 Sum_probs=67.8
Q ss_pred CCCeEEeeccChhhh---cCCCCccceeecC-------C------hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhc
Q 036598 52 DRGLIIKGWAPQVLI---LNHPAVGGFMTHC-------G------WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWK 115 (212)
Q Consensus 52 ~~~~~~~~~~p~~~i---l~~~~~~~~v~hg-------G------~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g 115 (212)
.+|+.+.+|+|+..+ |+. +.+++...- . .+-+.+.|++|+|+|+.+. ...+..+ ++.+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~----~~~~~~V-~~~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK----AAIADFI-VENG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC----ccHHHHH-HhCC
Confidence 467888899987654 443 443333221 1 1237788999999998643 5566777 5568
Q ss_pred ceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHH
Q 036598 116 IGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAK 173 (212)
Q Consensus 116 ~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~ 173 (212)
+|+.++ +.+++.+++.++. .+....|++|+++++++++
T Consensus 280 ~G~~v~-----------------~~~el~~~l~~~~---~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 280 LGFVVD-----------------SLEELPEIIDNIT---EEEYQEMVENVKKISKLLR 317 (333)
T ss_pred ceEEeC-----------------CHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHh
Confidence 999984 3357888888754 4667789999999999998
No 100
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.46 E-value=0.11 Score=46.73 Aligned_cols=95 Identities=9% Similarity=0.111 Sum_probs=59.8
Q ss_pred CCCeEEeeccChhh---hcCCC--CccceeecC---C-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 52 DRGLIIKGWAPQVL---ILNHP--AVGGFMTHC---G-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~p~~~---il~~~--~~~~~v~hg---G-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
..++.+.+++++.+ ++..+ +.++||... | ..++.||+++|+|+|+-...+ ....+ +.-..|+.+..
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv-~~~~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDII-ANCRNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHh-cCCCcEEEeCC
Confidence 34566666666543 34433 123376543 3 469999999999999876532 33444 43246887754
Q ss_pred cCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHH
Q 036598 123 ESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARK 167 (212)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~ 167 (212)
-+.+++.+++.+++ +|++....|.+++++
T Consensus 391 ---------------~d~~~la~~i~~ll-~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 391 ---------------LDLEAIASALEDAL-SDSSQWQLWSRNGIE 419 (439)
T ss_pred ---------------CCHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 46788999999999 874444444444443
No 101
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.45 E-value=0.057 Score=45.55 Aligned_cols=124 Identities=11% Similarity=0.031 Sum_probs=72.9
Q ss_pred EeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhh-cCCCeEEeeccChh---hhcCCCCccceee
Q 036598 3 VCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERV-KDRGLIIKGWAPQV---LILNHPAVGGFMT 77 (212)
Q Consensus 3 vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~-~~~~~~~~~~~p~~---~il~~~~~~~~v~ 77 (212)
+..|.... .+....+++++.+.+.++++ +|... ...+........ ..+++.+.+++++. .+++.+++-++-+
T Consensus 175 ~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 175 LFLGRISP--EKGPHLAIRAARRAGIPLKL-AGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred EEEEeecc--ccCHHHHHHHHHhcCCeEEE-EeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCC
Confidence 44555533 23344566777777888665 44432 111111111111 24678888998874 3577777733333
Q ss_pred c--CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 78 H--CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 78 h--gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
. -| ..++.||+++|+|+|+.... -....+ +.-..|..+. ..+++.+++.+++
T Consensus 252 ~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~-----------------~~~~l~~~l~~l~ 306 (335)
T cd03802 252 LWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVD-----------------SVEELAAAVARAD 306 (335)
T ss_pred cccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeC-----------------CHHHHHHHHHHHh
Confidence 2 33 35899999999999987653 222344 4323677662 2678999998887
No 102
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.31 E-value=0.25 Score=42.91 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=57.2
Q ss_pred CCCeEEeecc--Ch---hhhcCCCCccceeecC---C-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 52 DRGLIIKGWA--PQ---VLILNHPAVGGFMTHC---G-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~--p~---~~il~~~~~~~~v~hg---G-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
.+++.+.++. ++ ..+++.+++ |+... | ..++.||+++|+|+|+.+... ....+ ..-..|+.+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 3456666665 33 246677777 66433 2 359999999999999876532 22334 3324576552
Q ss_pred cCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHH
Q 036598 123 ESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKL 168 (212)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l 168 (212)
+.+.+..++.+++ +|++..+.|.+++++.
T Consensus 323 ----------------~~~~~a~~i~~ll-~~~~~~~~~~~~a~~~ 351 (372)
T cd03792 323 ----------------TVEEAAVRILYLL-RDPELRRKMGANAREH 351 (372)
T ss_pred ----------------CcHHHHHHHHHHH-cCHHHHHHHHHHHHHH
Confidence 3356777999999 8755555555555553
No 103
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.21 E-value=0.16 Score=46.98 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=76.8
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHh-----hcCCCeEEeeccChh---hhcCCCCc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEER-----VKDRGLIIKGWAPQV---LILNHPAV 72 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~-----~~~~~~~~~~~~p~~---~il~~~~~ 72 (212)
||+||+-....+++-+..-..-|...+-.++|..+...++.+...+++. +....+++.+-.|.. .-+.-+++
T Consensus 432 Vf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADl 511 (620)
T COG3914 432 VFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADL 511 (620)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhhe
Confidence 6889999999999998888888888899999998875422222222221 234556665555433 22333444
Q ss_pred ccee---ecCChhhHHHHHHcCCCeeccCcccchhh--HHHHHHHHhcceeEe
Q 036598 73 GGFM---THCGWNSVLESVSSGVPMITWPLFAEQFY--NENFVLTHWKIGVGV 120 (212)
Q Consensus 73 ~~~v---~hgG~~sv~eal~~GvP~i~iP~~~DQ~~--na~~v~~~~g~G~~~ 120 (212)
|+ ..||+.|..|+|.+|||++..+ ++|+. |+..++...|+--.+
T Consensus 512 --vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 512 --VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred --eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 54 5799999999999999999984 67764 444444544543333
No 104
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.83 E-value=0.45 Score=42.99 Aligned_cols=137 Identities=9% Similarity=0.064 Sum_probs=74.6
Q ss_pred HHHHHHHHhhCCceEEEEEeCCc-------ccccchhHHHhhcC-CCeE-Eee-ccCh--hhhcCCCCccceeecCChhh
Q 036598 16 LLEIALGLESSNICFIWVIKSDA-------FLLLDKDFEERVKD-RGLI-IKG-WAPQ--VLILNHPAVGGFMTHCGWNS 83 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~-------~~~lp~~~~~~~~~-~~~~-~~~-~~p~--~~il~~~~~~~~v~hgG~~s 83 (212)
+.++++.+...+++|++.-.... +...-..+.+.+.. .+.. +.+ +-+. ..+++++++ +|..= .-+
T Consensus 262 la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa 338 (426)
T PRK10017 262 FAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHS 338 (426)
T ss_pred HHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCE--EEEec-chH
Confidence 44566666666888776543211 11111222222222 2222 222 3233 257777765 66532 335
Q ss_pred HHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeE-eeccCCccccccchhccccCHHHHHHHHHHHhhcCc-cchHHH
Q 036598 84 VLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVG-VGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG-EEVEGM 161 (212)
Q Consensus 84 v~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~~~ 161 (212)
+.-|+..|+|.+.+++ | +.....+ +.+|..-. ++.++ ++.+++.+.+.+++ +|. +..+.+
T Consensus 339 ~I~a~~~gvP~i~i~Y--~-~K~~~~~-~~lg~~~~~~~~~~-------------l~~~~Li~~v~~~~-~~r~~~~~~l 400 (426)
T PRK10017 339 AIISMNFGTPAIAINY--E-HKSAGIM-QQLGLPEMAIDIRH-------------LLDGSLQAMVADTL-GQLPALNARL 400 (426)
T ss_pred HHHHHHcCCCEEEeee--h-HHHHHHH-HHcCCccEEechhh-------------CCHHHHHHHHHHHH-hCHHHHHHHH
Confidence 6667889999999998 2 3333334 55677644 44443 78889999999999 762 222234
Q ss_pred HHHHHHHHHHHH
Q 036598 162 RKRARKLSELAK 173 (212)
Q Consensus 162 ~~~a~~l~~~~~ 173 (212)
++++.++++...
T Consensus 401 ~~~v~~~r~~~~ 412 (426)
T PRK10017 401 AEAVSRERQTGM 412 (426)
T ss_pred HHHHHHHHHHHH
Confidence 444444444433
No 105
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.83 E-value=0.33 Score=45.26 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=43.9
Q ss_pred CCCeEEeeccCh-hhhcCCCCccceeec---CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 52 DRGLIIKGWAPQ-VLILNHPAVGGFMTH---CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~p~-~~il~~~~~~~~v~h---gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
.+++.+.++.++ ..+|..+++ ||.. -| .+++.||+++|+|+|..... -+...+ ..-..|..+..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEECC
Confidence 467878777654 346777777 7643 34 57999999999999987652 344555 33367888865
No 106
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.58 E-value=0.15 Score=35.21 Aligned_cols=65 Identities=14% Similarity=0.120 Sum_probs=42.6
Q ss_pred cCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhc-ceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCcc
Q 036598 78 HCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWK-IGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGE 156 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g-~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 156 (212)
+|-..-+.|++++|+|+|.-+. ......+ .. | .++.. -+.+++.+++..++ +|++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~-----------------~~~~el~~~i~~ll-~~~~ 64 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITY-----------------NDPEELAEKIEYLL-ENPE 64 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEE-----------------CCHHHHHHHHHHHH-CCHH
Confidence 4445689999999999998865 3333333 32 4 23333 26789999999999 9854
Q ss_pred chHHHHHHHH
Q 036598 157 EVEGMRKRAR 166 (212)
Q Consensus 157 ~~~~~~~~a~ 166 (212)
..+.+.+++.
T Consensus 65 ~~~~ia~~a~ 74 (92)
T PF13524_consen 65 ERRRIAKNAR 74 (92)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 107
>PLN02949 transferase, transferring glycosyl groups
Probab=95.55 E-value=0.1 Score=47.61 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=57.4
Q ss_pred CCCeEEeeccChh---hhcCCCCccceee---cCCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHH-hc-ceeEeec
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMT---HCGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTH-WK-IGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~---hgG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~-~g-~G~~~~~ 122 (212)
.+++.+..++++. .+|..+++ +|+ +-|. .++.||+++|+|+|.....+-- ...+.+. .| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--
Confidence 5678888888754 36777776 553 2233 4899999999999998653210 0001010 01 23333
Q ss_pred cCCccccccchhccccCHHHHHHHHHHHhhcC-ccchHHHHHHHHHHH
Q 036598 123 ESGLAWGEEEKIGVLVRRDRVEKVVYQFMING-GEEVEGMRKRARKLS 169 (212)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~~a~~l~ 169 (212)
-+.+++.+++.+++ ++ ++..++|.+++++..
T Consensus 407 ---------------~~~~~la~ai~~ll-~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 407 ---------------TTVEEYADAILEVL-RMRETERLEIAAAARKRA 438 (463)
T ss_pred ---------------CCHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 25688999999999 74 344445666665543
No 108
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.52 E-value=0.52 Score=41.25 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=68.0
Q ss_pred EEeeCCCCC-CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChh---hhcCCCCccceee
Q 036598 2 YVCFGSLCE-FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQV---LILNHPAVGGFMT 77 (212)
Q Consensus 2 ~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~---~il~~~~~~~~v~ 77 (212)
++-+|++.. .+.+.+..++.. ..+..+++. |.... .. ........+|+.+.+++|+. ..++++++.++-.
T Consensus 208 i~y~G~l~~~~d~~ll~~la~~--~p~~~~vli-G~~~~-~~--~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~ 281 (373)
T cd04950 208 IGYYGAIAEWLDLELLEALAKA--RPDWSFVLI-GPVDV-SI--DPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPF 281 (373)
T ss_pred EEEEeccccccCHHHHHHHHHH--CCCCEEEEE-CCCcC-cc--ChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCC
Confidence 455677764 333444444332 356776654 43210 00 11111224789998998854 3677788754422
Q ss_pred ------cCC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHH
Q 036598 78 ------HCG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQF 150 (212)
Q Consensus 78 ------hgG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 150 (212)
.++ -+.+.|++++|+|+|..++ + ... +..+.++.+ . -+.+++.++|.++
T Consensus 282 ~~~~~~~~~~P~Kl~EylA~G~PVVat~~----~---~~~-~~~~~~~~~-~---------------~d~~~~~~ai~~~ 337 (373)
T cd04950 282 RLNELTRATSPLKLFEYLAAGKPVVATPL----P---EVR-RYEDEVVLI-A---------------DDPEEFVAAIEKA 337 (373)
T ss_pred ccchhhhcCCcchHHHHhccCCCEEecCc----H---HHH-hhcCcEEEe-C---------------CCHHHHHHHHHHH
Confidence 223 2469999999999998764 1 122 322323333 1 3678999999997
Q ss_pred h
Q 036598 151 M 151 (212)
Q Consensus 151 l 151 (212)
+
T Consensus 338 l 338 (373)
T cd04950 338 L 338 (373)
T ss_pred H
Confidence 7
No 109
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.31 E-value=0.42 Score=43.08 Aligned_cols=82 Identities=12% Similarity=-0.037 Sum_probs=48.8
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeec----CChhhHHHHHHcCCCeeccCcc--cchhhHHHHHHHHhcceeEeec
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTH----CGWNSVLESVSSGVPMITWPLF--AEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~h----gG~~sv~eal~~GvP~i~iP~~--~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
..++.+....++. .+++.+++ ++.- +-..+.+||+++|+|+|+.... .|...+.... ...|.|+.+..
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~~ 426 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFEG 426 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeCC
Confidence 3556543333332 35666776 5532 1225789999999999976653 2222111111 11257888854
Q ss_pred cCCccccccchhccccCHHHHHHHHHHHh
Q 036598 123 ESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
.+.+++.+++.+++
T Consensus 427 ---------------~~~~~l~~~i~~~l 440 (476)
T cd03791 427 ---------------YNADALLAALRRAL 440 (476)
T ss_pred ---------------CCHHHHHHHHHHHH
Confidence 46788999999987
No 110
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.25 E-value=0.28 Score=43.23 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCc--ccccchhHHHhhc-CCCeEEeeccC---hhhhcCCCCccceeecCChhhH
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDA--FLLLDKDFEERVK-DRGLIIKGWAP---QVLILNHPAVGGFMTHCGWNSV 84 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~--~~~lp~~~~~~~~-~~~~~~~~~~p---~~~il~~~~~~~~v~hgG~~sv 84 (212)
...+.+..+++++...+..+++.++... ...+.+.+..... .+++.+.+.++ ...++.++++ +|+-++.+.
T Consensus 217 ~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi- 293 (365)
T TIGR03568 217 SAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI- 293 (365)
T ss_pred CchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-
Confidence 3456688888888777655555544321 1111122222222 45777766544 4567878887 998875544
Q ss_pred HHHHHcCCCeeccCcccchhhHHHHHHHHhcceeE-eeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 85 LESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVG-VGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 85 ~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
.||.+.|+|.|.+- +-+ ..+ +. |.-+. +. .++++|.+++.+++
T Consensus 294 ~EA~~lg~Pvv~l~---~R~---e~~-~~-g~nvl~vg----------------~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 294 IEAPSFGVPTINIG---TRQ---KGR-LR-ADSVIDVD----------------PDKEEIVKAIEKLL 337 (365)
T ss_pred HhhhhcCCCEEeec---CCc---hhh-hh-cCeEEEeC----------------CCHHHHHHHHHHHh
Confidence 99999999999773 211 111 22 43333 32 57789999999955
No 111
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=95.11 E-value=0.18 Score=50.20 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=62.9
Q ss_pred CCCeEEeeccChhh---hcCCCC--ccceeecC---C-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 52 DRGLIIKGWAPQVL---ILNHPA--VGGFMTHC---G-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~p~~~---il~~~~--~~~~v~hg---G-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
..++.+.+++++.. ++..++ .++||.-. | ..++.||+++|+|+|.-...+ ....+ +.-..|+.+..
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVdP 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVDP 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEECC
Confidence 45566777776543 444332 23376642 3 369999999999999986532 22233 33256888754
Q ss_pred cCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHH
Q 036598 123 ESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLS 169 (212)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~ 169 (212)
.+.++|.++|.+++ +|++..+.|.+++.+..
T Consensus 622 ---------------~D~eaLA~AL~~LL-~Dpelr~~m~~~gr~~v 652 (1050)
T TIGR02468 622 ---------------HDQQAIADALLKLV-ADKQLWAECRQNGLKNI 652 (1050)
T ss_pred ---------------CCHHHHHHHHHHHh-hCHHHHHHHHHHHHHHH
Confidence 46788999999999 88555556666655543
No 112
>PRK14098 glycogen synthase; Provisional
Probab=94.87 E-value=0.83 Score=41.89 Aligned_cols=80 Identities=6% Similarity=-0.073 Sum_probs=51.2
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeecCC----hhhHHHHHHcCCCeeccCcc--cchhhHHHHHHHHhcceeEeec
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTHCG----WNSVLESVSSGVPMITWPLF--AEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~hgG----~~sv~eal~~GvP~i~iP~~--~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
+.++.+..+++.. .+++.+++ |+...= ..+.+||+++|+|.|+.... .|...+. . +.-+.|..+..
T Consensus 361 ~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~--~-~~~~~G~l~~~ 435 (489)
T PRK14098 361 PEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEV--S-EDKGSGFIFHD 435 (489)
T ss_pred CCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecC--C-CCCCceeEeCC
Confidence 4567777777753 57777777 654322 24788999999998877542 2322110 0 11257777754
Q ss_pred cCCccccccchhccccCHHHHHHHHHHHh
Q 036598 123 ESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
.+++++.++|.+++
T Consensus 436 ---------------~d~~~la~ai~~~l 449 (489)
T PRK14098 436 ---------------YTPEALVAKLGEAL 449 (489)
T ss_pred ---------------CCHHHHHHHHHHHH
Confidence 56788999998865
No 113
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.80 E-value=1.2 Score=40.39 Aligned_cols=130 Identities=9% Similarity=-0.029 Sum_probs=67.3
Q ss_pred EeeCCCCC-CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhh--cCCCeEEeeccChh---hhcCCCCcccee
Q 036598 3 VCFGSLCE-FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERV--KDRGLIIKGWAPQV---LILNHPAVGGFM 76 (212)
Q Consensus 3 vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~--~~~~~~~~~~~p~~---~il~~~~~~~~v 76 (212)
+..|.+.. -..+.+.+.+..+.+.+.++++. |... ..+.+.+.+.. .+.++.+....+.. .+++.+++ ++
T Consensus 295 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv--~l 370 (473)
T TIGR02095 295 GVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD-PELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADF--IL 370 (473)
T ss_pred EEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC-HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE--EE
Confidence 34455443 12233444444444456776654 3331 01112222211 23455554444442 46777777 55
Q ss_pred ecC---Ch-hhHHHHHHcCCCeeccCccc--chhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHH
Q 036598 77 THC---GW-NSVLESVSSGVPMITWPLFA--EQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQF 150 (212)
Q Consensus 77 ~hg---G~-~sv~eal~~GvP~i~iP~~~--DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 150 (212)
.-. |. .+..||+++|+|+|+-...+ |...+...- ..-+.|+.+.. .+++++.++|.++
T Consensus 371 ~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~-~~~~~G~l~~~---------------~d~~~la~~i~~~ 434 (473)
T TIGR02095 371 MPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPE-AESGTGFLFEE---------------YDPGALLAALSRA 434 (473)
T ss_pred eCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCC-CCCCceEEeCC---------------CCHHHHHHHHHHH
Confidence 432 32 48899999999999875532 222111000 01167877754 4678899999998
Q ss_pred hhc
Q 036598 151 MIN 153 (212)
Q Consensus 151 l~~ 153 (212)
+ .
T Consensus 435 l-~ 436 (473)
T TIGR02095 435 L-R 436 (473)
T ss_pred H-H
Confidence 8 5
No 114
>PHA01633 putative glycosyl transferase group 1
Probab=94.72 E-value=0.41 Score=41.86 Aligned_cols=83 Identities=11% Similarity=0.049 Sum_probs=51.5
Q ss_pred CCCeEEee---ccCh---hhhcCCCCccceeecC---C-hhhHHHHHHcCCCeeccCc------ccch------hhHHHH
Q 036598 52 DRGLIIKG---WAPQ---VLILNHPAVGGFMTHC---G-WNSVLESVSSGVPMITWPL------FAEQ------FYNENF 109 (212)
Q Consensus 52 ~~~~~~~~---~~p~---~~il~~~~~~~~v~hg---G-~~sv~eal~~GvP~i~iP~------~~DQ------~~na~~ 109 (212)
..++.+.. ++++ ..+++.+++ ||.-. | ..++.||+++|+|+|.--. .+++ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 45677664 3343 246777776 66532 3 4689999999999997532 2222 222222
Q ss_pred HHH-HhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 110 VLT-HWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 110 v~~-~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
..+ ..|.|..+.. .+++++..++.+++
T Consensus 278 ~~~~~~g~g~~~~~---------------~d~~~la~ai~~~~ 305 (335)
T PHA01633 278 YYDKEHGQKWKIHK---------------FQIEDMANAIILAF 305 (335)
T ss_pred hcCcccCceeeecC---------------CCHHHHHHHHHHHH
Confidence 212 2356666543 78899999999986
No 115
>PLN02275 transferase, transferring glycosyl groups
Probab=94.56 E-value=0.53 Score=41.22 Aligned_cols=75 Identities=12% Similarity=0.196 Sum_probs=49.3
Q ss_pred CCeEEee-ccChhh---hcCCCCccceee----c--CC-hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEee
Q 036598 53 RGLIIKG-WAPQVL---ILNHPAVGGFMT----H--CG-WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVG 121 (212)
Q Consensus 53 ~~~~~~~-~~p~~~---il~~~~~~~~v~----h--gG-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~ 121 (212)
+|+.+.. |+|+.+ +++.+++ +|. . -| .+++.|++++|+|+|..... .+...+ +.-+.|+.+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc-cCCCCeEEEC
Confidence 4455544 677644 5777887 552 1 12 35899999999999987532 245555 5436788872
Q ss_pred ccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 122 VESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
+.+++.+++.+++
T Consensus 359 -----------------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -----------------SSSELADQLLELL 371 (371)
T ss_pred -----------------CHHHHHHHHHHhC
Confidence 3567888887664
No 116
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=93.90 E-value=0.68 Score=41.42 Aligned_cols=80 Identities=10% Similarity=0.005 Sum_probs=52.5
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeecC---C-hhhHHHHHHcCCCeeccCcccchhhHHHHHHH---HhcceeEee
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTHC---G-WNSVLESVSSGVPMITWPLFAEQFYNENFVLT---HWKIGVGVG 121 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~hg---G-~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~---~~g~G~~~~ 121 (212)
.+++.+.+++|+. .+|..+++ +|+-. | ..++.|||++|+|+|+.-..+. ....+ + .-..|+..
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv-~~~~~g~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIV-VPWDGGPTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chhee-eccCCCCceEEe-
Confidence 4678888888764 46777777 44321 2 3588999999999997643221 11112 2 22467665
Q ss_pred ccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 122 VESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
-+.+++.+++.+++ +++
T Consensus 377 ----------------~d~~~la~ai~~ll-~~~ 393 (419)
T cd03806 377 ----------------STAEEYAEAIEKIL-SLS 393 (419)
T ss_pred ----------------CCHHHHHHHHHHHH-hCC
Confidence 26688999999999 753
No 117
>PLN02316 synthase/transferase
Probab=93.75 E-value=2.3 Score=42.62 Aligned_cols=113 Identities=8% Similarity=-0.078 Sum_probs=63.5
Q ss_pred CCeEEeeccChh---hhcCCCCccceeecC----ChhhHHHHHHcCCCeeccCcc--cchhhHHH----HHH--HHhcce
Q 036598 53 RGLIIKGWAPQV---LILNHPAVGGFMTHC----GWNSVLESVSSGVPMITWPLF--AEQFYNEN----FVL--THWKIG 117 (212)
Q Consensus 53 ~~~~~~~~~p~~---~il~~~~~~~~v~hg----G~~sv~eal~~GvP~i~iP~~--~DQ~~na~----~v~--~~~g~G 117 (212)
.++.+....+.. .+++.+++ |+.-. =..+.+||+++|+|.|+-... .|...... ... ..-+.|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 345554444432 46766776 76542 136899999999999876542 23322110 000 001468
Q ss_pred eEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 036598 118 VGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLL 189 (212)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 189 (212)
+.+.. .+++.|..+|.+++ . .+......++...++.+....+-...+.+.
T Consensus 978 flf~~---------------~d~~aLa~AL~raL-~------~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316 978 FSFDG---------------ADAAGVDYALNRAI-S------AWYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred EEeCC---------------CCHHHHHHHHHHHH-h------hhhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 77754 57788999999998 4 233334445555555555555444333333
No 118
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=93.51 E-value=0.82 Score=39.99 Aligned_cols=74 Identities=24% Similarity=0.207 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEE-eeccChhhhcCCCCccceeecCChhhHHHHHHcCC
Q 036598 14 SQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLII-KGWAPQVLILNHPAVGGFMTHCGWNSVLESVSSGV 92 (212)
Q Consensus 14 ~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~-~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~~Gv 92 (212)
..+.++++.|+..+..++ .++.... .++.+. .-++.+ ..-++..++|.++++ +|+-|| +...||...|+
T Consensus 199 ~i~~~ii~~L~~~~~~vV-~ipr~~~--~~~~~~----~~~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGt 268 (335)
T PF04007_consen 199 SILPEIIEELEKYGRNVV-IIPRYED--QRELFE----KYGVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGT 268 (335)
T ss_pred chHHHHHHHHHhhCceEE-EecCCcc--hhhHHh----ccCccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCC
Confidence 335667888887777644 3333220 111111 112222 233455578988888 998777 78899999999
Q ss_pred Ceecc
Q 036598 93 PMITW 97 (212)
Q Consensus 93 P~i~i 97 (212)
|.|.+
T Consensus 269 PaIs~ 273 (335)
T PF04007_consen 269 PAISC 273 (335)
T ss_pred CEEEe
Confidence 99975
No 119
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.47 E-value=2 Score=38.87 Aligned_cols=69 Identities=12% Similarity=-0.004 Sum_probs=43.5
Q ss_pred hhcCCCCccceeec---CCh-hhHHHHHHcCCCeeccCcc--cchhhHHHHHHHHhcceeEeeccCCccccccchhcccc
Q 036598 65 LILNHPAVGGFMTH---CGW-NSVLESVSSGVPMITWPLF--AEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLV 138 (212)
Q Consensus 65 ~il~~~~~~~~v~h---gG~-~sv~eal~~GvP~i~iP~~--~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~ 138 (212)
.+++.+++ ||.- -|. .+..||+++|+|.|+.... .|...+...-.+ -+.|+.+.. -
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~~---------------~ 413 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFDD---------------F 413 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeCC---------------C
Confidence 46777777 5542 233 5899999999999986542 232111100002 167888754 4
Q ss_pred CHHHHHHHHHHHh
Q 036598 139 RRDRVEKVVYQFM 151 (212)
Q Consensus 139 ~~~~l~~ai~~vl 151 (212)
+++++.+++.+++
T Consensus 414 d~~~la~~i~~~l 426 (466)
T PRK00654 414 NAEDLLRALRRAL 426 (466)
T ss_pred CHHHHHHHHHHHH
Confidence 6788999999887
No 120
>PLN02939 transferase, transferring glycosyl groups
Probab=92.78 E-value=3 Score=41.36 Aligned_cols=83 Identities=6% Similarity=0.037 Sum_probs=51.6
Q ss_pred CCCeEEeeccChh---hhcCCCCccceeecC----ChhhHHHHHHcCCCeeccCccc--chhhH--HHHHHHHhcceeEe
Q 036598 52 DRGLIIKGWAPQV---LILNHPAVGGFMTHC----GWNSVLESVSSGVPMITWPLFA--EQFYN--ENFVLTHWKIGVGV 120 (212)
Q Consensus 52 ~~~~~~~~~~p~~---~il~~~~~~~~v~hg----G~~sv~eal~~GvP~i~iP~~~--DQ~~n--a~~v~~~~g~G~~~ 120 (212)
..++.+..+.+.. .+++.+++ ||.-. -..+++||+++|+|.|+....+ |...+ ...+.+.-+.|+.+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3467776777653 47777777 76532 1358999999999999876532 32211 11111112567777
Q ss_pred eccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 121 GVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
.. .+++++..++.+++
T Consensus 914 ~~---------------~D~eaLa~AL~rAL 929 (977)
T PLN02939 914 LT---------------PDEQGLNSALERAF 929 (977)
T ss_pred cC---------------CCHHHHHHHHHHHH
Confidence 54 46778888888876
No 121
>PLN02846 digalactosyldiacylglycerol synthase
Probab=92.04 E-value=1.2 Score=40.70 Aligned_cols=72 Identities=10% Similarity=0.091 Sum_probs=47.7
Q ss_pred EeeccChhhhcCCCCccceeecCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccc
Q 036598 57 IKGWAPQVLILNHPAVGGFMTHCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEE 132 (212)
Q Consensus 57 ~~~~~p~~~il~~~~~~~~v~hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~ 132 (212)
+.++.+...++...++ ||.-+- .+++.||+++|+|+|..-... + ..+ ..-+.|...
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~------------ 347 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTY------------ 347 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEec------------
Confidence 4445555567777776 876643 479999999999999875432 2 223 322344333
Q ss_pred hhccccCHHHHHHHHHHHhhcC
Q 036598 133 KIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 133 ~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
-+.+++.+++.++| .+
T Consensus 348 -----~~~~~~a~ai~~~l-~~ 363 (462)
T PLN02846 348 -----DDGKGFVRATLKAL-AE 363 (462)
T ss_pred -----CCHHHHHHHHHHHH-cc
Confidence 25678999999998 64
No 122
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=91.99 E-value=2.1 Score=38.00 Aligned_cols=83 Identities=14% Similarity=0.178 Sum_probs=60.2
Q ss_pred CCeEEee---ccChhhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcccc
Q 036598 53 RGLIIKG---WAPQVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWG 129 (212)
Q Consensus 53 ~~~~~~~---~~p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 129 (212)
+++.+.+ |.+...++.++.+ ++|-.| |-.-||-..|+|.+++=...++|. .+ +. |.-+.++
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg-------- 325 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILVG-------- 325 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEeC--------
Confidence 3566544 5667788888876 898877 456789999999999988778874 33 32 5555553
Q ss_pred ccchhccccCHHHHHHHHHHHhhcCccchHHHHHH
Q 036598 130 EEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKR 164 (212)
Q Consensus 130 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~ 164 (212)
.+.+.|.+++.+++ ++ ++..+|
T Consensus 326 --------~~~~~i~~~~~~ll-~~----~~~~~~ 347 (383)
T COG0381 326 --------TDEENILDAATELL-ED----EEFYER 347 (383)
T ss_pred --------ccHHHHHHHHHHHh-hC----hHHHHH
Confidence 56788999999999 87 454444
No 123
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=91.83 E-value=0.99 Score=35.14 Aligned_cols=50 Identities=24% Similarity=0.242 Sum_probs=35.2
Q ss_pred cCCCeEEeeccCh---h-hhcCCCCccceeecCC----hhhHHHHHHcCCCeeccCcccc
Q 036598 51 KDRGLIIKGWAPQ---V-LILNHPAVGGFMTHCG----WNSVLESVSSGVPMITWPLFAE 102 (212)
Q Consensus 51 ~~~~~~~~~~~p~---~-~il~~~~~~~~v~hgG----~~sv~eal~~GvP~i~iP~~~D 102 (212)
...|+.+.++++. . .++..+++ +++-.. .+++.||+++|+|+|+.+....
T Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 159 LLDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred CcccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 3567888787632 2 23433666 666665 6899999999999999887543
No 124
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=91.80 E-value=2.8 Score=37.27 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=57.5
Q ss_pred hhhhcCCCCccceeecCChhhHHHHHHcCCCeeccCccc-chhhHHHHHHHH--hcceeEeeccCCccccccchhccccC
Q 036598 63 QVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFA-EQFYNENFVLTH--WKIGVGVGVESGLAWGEEEKIGVLVR 139 (212)
Q Consensus 63 ~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~-DQ~~na~~v~~~--~g~G~~~~~~~~~~~~~~~~~~~~~~ 139 (212)
...++..+++ .+.-.| ..++|+...|+|||++=... =..+-++++++- .|+--.+-..+.+- +..-..++
T Consensus 254 ~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~P----EliQ~~~~ 326 (373)
T PF02684_consen 254 SYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVP----ELIQEDAT 326 (373)
T ss_pred hHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcch----hhhcccCC
Confidence 3456776776 555444 57789999999999873321 223345555221 11111111111100 00011379
Q ss_pred HHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchH
Q 036598 140 RDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSY 183 (212)
Q Consensus 140 ~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 183 (212)
++.|..++.+++ .|.+. ++......+.+++....+.++.
T Consensus 327 ~~~i~~~~~~ll-~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 365 (373)
T PF02684_consen 327 PENIAAELLELL-ENPEK----RKKQKELFREIRQLLGPGASSR 365 (373)
T ss_pred HHHHHHHHHHHh-cCHHH----HHHHHHHHHHHHHhhhhccCCH
Confidence 999999999999 88333 4444444444444434455444
No 125
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=91.47 E-value=1.6 Score=40.48 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=60.1
Q ss_pred CCeEEeeccC--h-hhhcCCCCccceeecC---ChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 53 RGLIIKGWAP--Q-VLILNHPAVGGFMTHC---GWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 53 ~~~~~~~~~p--~-~~il~~~~~~~~v~hg---G~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
..+.+.++.+ + ...+..+.+ +|.=+ |.++..||+.+|+|+| .......+ +...=|..++
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEeC-----
Confidence 4566777666 3 346655555 77655 5679999999999999 11123334 4435677772
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHH
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELA 172 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~ 172 (212)
+..++.+++...| .+.+.-+.+...+-+.++..
T Consensus 474 ------------d~~~l~~al~~~L-~~~~~wn~~~~~sy~~~~~y 506 (519)
T TIGR03713 474 ------------DISELLKALDYYL-DNLKNWNYSLAYSIKLIDDY 506 (519)
T ss_pred ------------CHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHh
Confidence 4578999999999 87555555555555555443
No 126
>PRK10125 putative glycosyl transferase; Provisional
Probab=90.07 E-value=10 Score=33.85 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=50.0
Q ss_pred HHHHHHHHhhCCce-EEEEEeCCcccccchhHHHhhcCCCeEEeeccC-h---hhhcCCCCccceeecC----ChhhHHH
Q 036598 16 LLEIALGLESSNIC-FIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP-Q---VLILNHPAVGGFMTHC----GWNSVLE 86 (212)
Q Consensus 16 ~~~~~~~l~~~~~~-viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-~---~~il~~~~~~~~v~hg----G~~sv~e 86 (212)
...+++++...+.. -++.+|.... . ...++....+.+ + ..+++.+++ ||.-. -..++.|
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~~-----~-----~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vilE 325 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFSP-----F-----TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLILCE 325 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCCc-----c-----cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHHHH
Confidence 45566666654322 2444554320 0 012344444542 2 335555666 66533 2479999
Q ss_pred HHHcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 87 SVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 87 al~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
|+++|+|+|.-...+ ....+ +. +.|+.+..
T Consensus 326 AmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~ 355 (405)
T PRK10125 326 ALSIGVPVIATHSDA----AREVL-QK-SGGKTVSE 355 (405)
T ss_pred HHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECC
Confidence 999999999987754 12233 43 57888865
No 127
>PRK14099 glycogen synthase; Provisional
Probab=88.66 E-value=5.5 Score=36.47 Aligned_cols=78 Identities=10% Similarity=0.059 Sum_probs=43.0
Q ss_pred CCCccceeec---CC-hhhHHHHHHcCCCeeccCcc--cchhhHHHHHHHH--hcceeEeeccCCccccccchhccccCH
Q 036598 69 HPAVGGFMTH---CG-WNSVLESVSSGVPMITWPLF--AEQFYNENFVLTH--WKIGVGVGVESGLAWGEEEKIGVLVRR 140 (212)
Q Consensus 69 ~~~~~~~v~h---gG-~~sv~eal~~GvP~i~iP~~--~DQ~~na~~v~~~--~g~G~~~~~~~~~~~~~~~~~~~~~~~ 140 (212)
.+++ ||.- =| ..+..||+++|+|.|+.... .|...+.....+. -+.|+.+.. .+.
T Consensus 369 ~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~---------------~d~ 431 (485)
T PRK14099 369 GADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP---------------VTA 431 (485)
T ss_pred cCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC---------------CCH
Confidence 3555 6642 22 35889999999877765432 2322111110010 146877754 577
Q ss_pred HHHHHHHHH---HhhcCccchHHHHHH
Q 036598 141 DRVEKVVYQ---FMINGGEEVEGMRKR 164 (212)
Q Consensus 141 ~~l~~ai~~---vl~~~~~~~~~~~~~ 164 (212)
+++.+++.+ ++ +|.+..+.+.++
T Consensus 432 ~~La~ai~~a~~l~-~d~~~~~~l~~~ 457 (485)
T PRK14099 432 DALAAALRKTAALF-ADPVAWRRLQRN 457 (485)
T ss_pred HHHHHHHHHHHHHh-cCHHHHHHHHHH
Confidence 889999987 56 663333334333
No 128
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=88.42 E-value=4.8 Score=35.74 Aligned_cols=95 Identities=12% Similarity=0.213 Sum_probs=54.8
Q ss_pred hcCCCCccceeecCChhhHHHHHHcCCCeeccCccc-chhhHHHHHHHHhc-------ceeEeeccCCccccccchhccc
Q 036598 66 ILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFA-EQFYNENFVLTHWK-------IGVGVGVESGLAWGEEEKIGVL 137 (212)
Q Consensus 66 il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~-DQ~~na~~v~~~~g-------~G~~~~~~~~~~~~~~~~~~~~ 137 (212)
++..+++ .+.-+| .-+.|+..+|+|||+.=-.. =-.+-++++..-.- +|..+-+ +.+ ...
T Consensus 261 a~~~aD~--al~aSG-T~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivP-Eli--------q~~ 328 (381)
T COG0763 261 AFAAADA--ALAASG-TATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVP-ELI--------QED 328 (381)
T ss_pred HHHHhhH--HHHhcc-HHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccch-HHH--------hhh
Confidence 5555565 555455 45789999999999762211 11223333311100 1111111 000 112
Q ss_pred cCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHH
Q 036598 138 VRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAK 173 (212)
Q Consensus 138 ~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~ 173 (212)
++++.|.+++.+++ .|+.+.+.+.+....+...++
T Consensus 329 ~~pe~la~~l~~ll-~~~~~~~~~~~~~~~l~~~l~ 363 (381)
T COG0763 329 CTPENLARALEELL-LNGDRREALKEKFRELHQYLR 363 (381)
T ss_pred cCHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHc
Confidence 78999999999999 886666677777777777766
No 129
>PHA01630 putative group 1 glycosyl transferase
Probab=87.71 E-value=0.84 Score=39.68 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=24.8
Q ss_pred hhcCCCCccceeecCC--hhhHHHHHHcCCCeeccCc
Q 036598 65 LILNHPAVGGFMTHCG--WNSVLESVSSGVPMITWPL 99 (212)
Q Consensus 65 ~il~~~~~~~~v~hgG--~~sv~eal~~GvP~i~iP~ 99 (212)
.+++.+++-++-++.. ..++.||+++|+|+|+...
T Consensus 205 ~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~ 241 (331)
T PHA01630 205 SLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEK 241 (331)
T ss_pred HHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCC
Confidence 3677777733333322 4689999999999999764
No 130
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.54 E-value=5.2 Score=36.43 Aligned_cols=103 Identities=13% Similarity=0.034 Sum_probs=63.6
Q ss_pred eccChhh---hcCCCCccceee---cCCh-hhHHHHHHcCCC----eeccCcccchhhHHHHHHHHhcceeEeeccCCcc
Q 036598 59 GWAPQVL---ILNHPAVGGFMT---HCGW-NSVLESVSSGVP----MITWPLFAEQFYNENFVLTHWKIGVGVGVESGLA 127 (212)
Q Consensus 59 ~~~p~~~---il~~~~~~~~v~---hgG~-~sv~eal~~GvP----~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 127 (212)
..+++.. ++..+++ |+. +-|. .++.|++++|+| +|+--+.+- +..+ +-|+.+..
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEECC-----
Confidence 3455543 5666776 654 3354 588999999999 555544322 1222 35777754
Q ss_pred ccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036598 128 WGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLL 194 (212)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~ 194 (212)
.+.+++.++|.++| +.+ .++.+++.+++.+.+. ..+....+.+++++|.
T Consensus 407 ----------~d~~~lA~aI~~aL-~~~--~~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 ----------YDIDGMADAIARAL-TMP--LEEREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred ----------CCHHHHHHHHHHHH-cCC--HHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 57789999999998 631 1344455555555544 3566666777777663
No 131
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=86.99 E-value=21 Score=33.80 Aligned_cols=97 Identities=13% Similarity=0.208 Sum_probs=57.7
Q ss_pred hhhcCCCCccceeecCChhhHHHHHHcCCCeeccCccc-chhhHHHHHHH----Hhc-----ceeEeeccCCccccccch
Q 036598 64 VLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFA-EQFYNENFVLT----HWK-----IGVGVGVESGLAWGEEEK 133 (212)
Q Consensus 64 ~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~-DQ~~na~~v~~----~~g-----~G~~~~~~~~~~~~~~~~ 133 (212)
..+++.+++ .+.-.| ..+.|++..|+|||++=... =...-++++.+ ..+ +|..+-++- .
T Consensus 483 ~~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEl-----l--- 551 (608)
T PRK01021 483 YELMRECDC--ALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEF-----I--- 551 (608)
T ss_pred HHHHHhcCe--eeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhh-----c---
Confidence 467777776 666666 46789999999999863221 12233555533 011 111111110 0
Q ss_pred h-ccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHH
Q 036598 134 I-GVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAK 173 (212)
Q Consensus 134 ~-~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~ 173 (212)
+ -..++++.|.+++ ++| .|+++.+++++..+++.+.+.
T Consensus 552 qgQ~~~tpe~La~~l-~lL-~d~~~r~~~~~~l~~lr~~Lg 590 (608)
T PRK01021 552 GGKKDFQPEEVAAAL-DIL-KTSQSKEKQKDACRDLYQAMN 590 (608)
T ss_pred CCcccCCHHHHHHHH-HHh-cCHHHHHHHHHHHHHHHHHhc
Confidence 0 0137899999997 888 776666677777777766654
No 132
>PLN02501 digalactosyldiacylglycerol synthase
Probab=85.69 E-value=5.4 Score=38.50 Aligned_cols=75 Identities=11% Similarity=-0.024 Sum_probs=48.4
Q ss_pred eEEeeccChh-hhcCCCCccceeecCC----hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcccc
Q 036598 55 LIIKGWAPQV-LILNHPAVGGFMTHCG----WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWG 129 (212)
Q Consensus 55 ~~~~~~~p~~-~il~~~~~~~~v~hgG----~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 129 (212)
+.+.++.++. .+++.+++ ||.-+= .+++.||+++|+|+|+........ + .. |.+..+.
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~-g~nGll~-------- 665 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RS-FPNCLTY-------- 665 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-ee-cCCeEec--------
Confidence 4455555544 47777776 665332 479999999999999886643221 2 22 3222221
Q ss_pred ccchhccccCHHHHHHHHHHHhhcCc
Q 036598 130 EEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 130 ~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
-+.+++.+++.++| .++
T Consensus 666 --------~D~EafAeAI~~LL-sd~ 682 (794)
T PLN02501 666 --------KTSEDFVAKVKEAL-ANE 682 (794)
T ss_pred --------CCHHHHHHHHHHHH-hCc
Confidence 35788999999999 763
No 133
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=84.99 E-value=16 Score=33.24 Aligned_cols=92 Identities=11% Similarity=0.095 Sum_probs=60.7
Q ss_pred CCeEE-eeccC-h-hhhcCCCCccceeecCC--hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcc
Q 036598 53 RGLII-KGWAP-Q-VLILNHPAVGGFMTHCG--WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLA 127 (212)
Q Consensus 53 ~~~~~-~~~~p-~-~~il~~~~~~~~v~hgG--~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 127 (212)
+|+.. ..+.+ . ..++..+++.+-++||. ..++.||+.+|+|++..=... .+...+ .. |..+..
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~---~~~~~i-~~---g~l~~~----- 395 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETA---HNRDFI-AS---ENIFEH----- 395 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEeccc---CCcccc-cC---CceecC-----
Confidence 55554 44556 3 46899999999999988 479999999999999763321 122222 21 444433
Q ss_pred ccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHH
Q 036598 128 WGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSE 170 (212)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~ 170 (212)
-..+++.++|.++| .++ +.++++..+-++
T Consensus 396 ----------~~~~~m~~~i~~lL-~d~---~~~~~~~~~q~~ 424 (438)
T TIGR02919 396 ----------NEVDQLISKLKDLL-NDP---NQFRELLEQQRE 424 (438)
T ss_pred ----------CCHHHHHHHHHHHh-cCH---HHHHHHHHHHHH
Confidence 35688999999999 872 245555444333
No 134
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=84.62 E-value=25 Score=30.35 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=52.9
Q ss_pred CCHHHHHHHH----HHHhhCCceEEEEEeCCcccccchhHHHhhc-CCCeEEeec---cChhhhcCCCCccceeecCChh
Q 036598 11 FAESQLLEIA----LGLESSNICFIWVIKSDAFLLLDKDFEERVK-DRGLIIKGW---APQVLILNHPAVGGFMTHCGWN 82 (212)
Q Consensus 11 ~~~~~~~~~~----~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~-~~~~~~~~~---~p~~~il~~~~~~~~v~hgG~~ 82 (212)
++.+....++ ..+...+..++.+.+......+-+.+.+... .+.+.+.+- -|....|+.++. ++||--..+
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~-i~VT~DSvS 240 (311)
T PF06258_consen 162 WDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADA-IVVTEDSVS 240 (311)
T ss_pred cCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCE-EEEcCccHH
Confidence 5666444433 3333456566666555542222222332222 234423232 245567777765 567777789
Q ss_pred hHHHHHHcCCCeeccCccc
Q 036598 83 SVLESVSSGVPMITWPLFA 101 (212)
Q Consensus 83 sv~eal~~GvP~i~iP~~~ 101 (212)
-+.||+..|+|+.++|.-.
T Consensus 241 MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 241 MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHHHHHHcCCCEEEecCCC
Confidence 9999999999999999865
No 135
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=84.23 E-value=9.9 Score=37.12 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=41.4
Q ss_pred hhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhh---cCccc
Q 036598 81 WNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMI---NGGEE 157 (212)
Q Consensus 81 ~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~---~~~~~ 157 (212)
..++.||+++|+|+|.-... -....+ ..-..|..++. .+.+++.+++.+++. +|++.
T Consensus 657 GLvvLEAMAcGlPVVAT~~G----G~~EiV-~dg~tGfLVdp---------------~D~eaLA~aL~~ll~kll~dp~~ 716 (784)
T TIGR02470 657 GLTVLEAMTCGLPTFATRFG----GPLEII-QDGVSGFHIDP---------------YHGEEAAEKIVDFFEKCDEDPSY 716 (784)
T ss_pred CHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeCC---------------CCHHHHHHHHHHHHHHhcCCHHH
Confidence 36999999999999986543 234455 43356888865 456778888776640 45333
Q ss_pred hHHHHHHH
Q 036598 158 VEGMRKRA 165 (212)
Q Consensus 158 ~~~~~~~a 165 (212)
.+.|.+++
T Consensus 717 ~~~ms~~a 724 (784)
T TIGR02470 717 WQKISQGG 724 (784)
T ss_pred HHHHHHHH
Confidence 33444443
No 136
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=83.21 E-value=3.7 Score=34.96 Aligned_cols=84 Identities=13% Similarity=0.041 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccCh-hhhcCCCCccceeecCChhhHHHHHH
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQ-VLILNHPAVGGFMTHCGWNSVLESVS 89 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~-~~il~~~~~~~~v~hgG~~sv~eal~ 89 (212)
++.+.+.++++.+...++++++..+...+...-+.+.+.....++.-..-+++ ..+++++++ +|+.- .|.++=|.+
T Consensus 195 wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a~l--~I~~D-Sgp~HlAaa 271 (319)
T TIGR02193 195 WPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGADA--VVGVD-TGLTHLAAA 271 (319)
T ss_pred CCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcCCE--EEeCC-ChHHHHHHH
Confidence 78888889998887668887766554332111122222111111111112334 457777777 88864 467888889
Q ss_pred cCCCeecc
Q 036598 90 SGVPMITW 97 (212)
Q Consensus 90 ~GvP~i~i 97 (212)
.|+|+|.+
T Consensus 272 ~g~P~i~l 279 (319)
T TIGR02193 272 LDKPTVTL 279 (319)
T ss_pred cCCCEEEE
Confidence 99999976
No 137
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=83.01 E-value=21 Score=28.24 Aligned_cols=133 Identities=10% Similarity=0.046 Sum_probs=66.0
Q ss_pred HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC-------hhhhcCCCCccceeecCChhhHHHH-
Q 036598 16 LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP-------QVLILNHPAVGGFMTHCGWNSVLES- 87 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-------~~~il~~~~~~~~v~hgG~~sv~ea- 87 (212)
...+++.|.+.+..|-..+.......+.....+......+....|.+ +..+...+++ .+|.-+-+||+.-.
T Consensus 17 ~~~li~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~~v~~~~~~~~~~~~~~hi~l~~~aD~-~vIaPaTantlakiA 95 (182)
T PRK07313 17 AADLTSQLTKRGYQVTVLMTKAATKFITPLTLQVLSKNPVHLDVMDEHDPKLMNHIELAKRADL-FLVAPATANTIAKLA 95 (182)
T ss_pred HHHHHHHHHHCCCEEEEEEChhHHHHcCHHHHHHHhCCceEeccccccccCCccccccccccCE-EEEeeCCHhHHHHHH
Confidence 44566677666776555444433333332211111222232222221 1222222332 35666655544322
Q ss_pred ------------HHc--CCCeeccCccc----ch---hhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHH
Q 036598 88 ------------VSS--GVPMITWPLFA----EQ---FYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKV 146 (212)
Q Consensus 88 ------------l~~--GvP~i~iP~~~----DQ---~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 146 (212)
+.. ++|+++.|-.. .. ..|..++ ++.|+=+.-.....+.|.+++... ..+.++|.+.
T Consensus 96 ~GiaDnllt~~~~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L-~~~G~~vi~p~~g~la~~~~g~g~-~~~~~~i~~~ 173 (182)
T PRK07313 96 HGIADDLVTSVALALPATTPKLIAPAMNTKMYENPATQRNLKTL-KEDGVQEIEPKEGLLACGDEGYGA-LADIETILET 173 (182)
T ss_pred ccccCcHHHHHHHHcCCCCCEEEEECCCHHHhcCHHHHHHHHHH-HHCCCEEECCCCCccccCCccCCC-CCCHHHHHHH
Confidence 344 89999999632 22 4567777 444655544443333455555433 3567788877
Q ss_pred HHHHh
Q 036598 147 VYQFM 151 (212)
Q Consensus 147 i~~vl 151 (212)
+.+.+
T Consensus 174 v~~~~ 178 (182)
T PRK07313 174 IENTL 178 (182)
T ss_pred HHHHh
Confidence 77765
No 138
>PLN00142 sucrose synthase
Probab=82.80 E-value=14 Score=36.18 Aligned_cols=70 Identities=10% Similarity=0.132 Sum_probs=43.5
Q ss_pred eeec---CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH-
Q 036598 75 FMTH---CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ- 149 (212)
Q Consensus 75 ~v~h---gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~- 149 (212)
||.- -|. .++.||+++|+|+|.-...+ ....+ ..-..|..++. .+.+++.++|.+
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV-~dG~tG~LV~P---------------~D~eaLA~aI~~l 729 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEII-VDGVSGFHIDP---------------YHGDEAANKIADF 729 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEeCC---------------CCHHHHHHHHHHH
Confidence 6653 333 59999999999999865432 33455 44246888865 355666666654
Q ss_pred ---HhhcCccchHHHHHHH
Q 036598 150 ---FMINGGEEVEGMRKRA 165 (212)
Q Consensus 150 ---vl~~~~~~~~~~~~~a 165 (212)
++ +|++....|.+++
T Consensus 730 LekLl-~Dp~lr~~mg~~A 747 (815)
T PLN00142 730 FEKCK-EDPSYWNKISDAG 747 (815)
T ss_pred HHHhc-CCHHHHHHHHHHH
Confidence 55 6644444454444
No 139
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=82.71 E-value=7.1 Score=38.20 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=61.9
Q ss_pred hhcCCCCccceee---cCChh-hHHHHHHcCCC---eeccCcccchhhHHHHHHHHhc-ceeEeeccCCccccccchhcc
Q 036598 65 LILNHPAVGGFMT---HCGWN-SVLESVSSGVP---MITWPLFAEQFYNENFVLTHWK-IGVGVGVESGLAWGEEEKIGV 136 (212)
Q Consensus 65 ~il~~~~~~~~v~---hgG~~-sv~eal~~GvP---~i~iP~~~DQ~~na~~v~~~~g-~G~~~~~~~~~~~~~~~~~~~ 136 (212)
.+++.+++ ||. +-|+| ++.|++++|+| +++++-++- .+.. +| .|+.+..
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~----l~~~allVnP-------------- 427 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS----LGAGALLVNP-------------- 427 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhh----hcCCeEEECC--------------
Confidence 46667777 553 34665 78899999999 444443221 1111 24 5777765
Q ss_pred ccCHHHHHHHHHHHhhc-CccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 137 LVRRDRVEKVVYQFMIN-GGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 137 ~~~~~~l~~ai~~vl~~-~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
.+.+++.++|.++| + +. ++-+++.+++.+.+. ..+....+..+++.+....
T Consensus 428 -~D~~~lA~AI~~aL-~m~~---~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 428 -WNITEVSSAIKEAL-NMSD---EERETRHRHNFQYVK-----THSAQKWADDFMSELNDII 479 (797)
T ss_pred -CCHHHHHHHHHHHH-hCCH---HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHHHHh
Confidence 57789999999999 6 31 233444455555544 4455566777887776553
No 140
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=81.47 E-value=6.4 Score=32.82 Aligned_cols=92 Identities=10% Similarity=0.111 Sum_probs=52.8
Q ss_pred EEeeCCCCC---CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCC-eEEeec--cCh-hhhcCCCCccc
Q 036598 2 YVCFGSLCE---FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRG-LIIKGW--APQ-VLILNHPAVGG 74 (212)
Q Consensus 2 ~vs~GS~~~---~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~-~~~~~~--~p~-~~il~~~~~~~ 74 (212)
.+..||... ++.+.+.++++.+...++++++..++... ..-+.+.+.....+ +.+.+- +.+ ..++.++++
T Consensus 125 ~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~-~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l-- 201 (279)
T cd03789 125 VLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAER-ELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL-- 201 (279)
T ss_pred EECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhH-HHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE--
Confidence 344555432 77888889999888778888866443321 11111211110111 111121 222 457777777
Q ss_pred eeecCChhhHHHHHHcCCCeecc
Q 036598 75 FMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~i 97 (212)
+|+.-. |.++=|.+.|+|++++
T Consensus 202 ~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 202 VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred EEeeCC-HHHHHHHHcCCCEEEE
Confidence 888754 6677778899999876
No 141
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=79.31 E-value=1.8 Score=30.87 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=31.5
Q ss_pred CEEeeCCCCCC---CH--HHHHHHHHHHhhCCceEEEEEeCCc
Q 036598 1 LYVCFGSLCEF---AE--SQLLEIALGLESSNICFIWVIKSDA 38 (212)
Q Consensus 1 V~vs~GS~~~~---~~--~~~~~~~~~l~~~~~~viw~~~~~~ 38 (212)
|+||+||.... .. ..+..+++++..++..+|.+++...
T Consensus 43 VcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~ 85 (97)
T PF06722_consen 43 VCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQ 85 (97)
T ss_dssp EEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCC
T ss_pred EEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHH
Confidence 68999999873 22 3588899999999999999988765
No 142
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=77.24 E-value=22 Score=33.51 Aligned_cols=78 Identities=13% Similarity=0.020 Sum_probs=43.9
Q ss_pred hhhcCCCCccceee---cCC-hhhHHHHHHcCCCeeccCccc-chhhHHHHHHHHh-cceeEeeccCCccccccchhccc
Q 036598 64 VLILNHPAVGGFMT---HCG-WNSVLESVSSGVPMITWPLFA-EQFYNENFVLTHW-KIGVGVGVESGLAWGEEEKIGVL 137 (212)
Q Consensus 64 ~~il~~~~~~~~v~---hgG-~~sv~eal~~GvP~i~iP~~~-DQ~~na~~v~~~~-g~G~~~~~~~~~~~~~~~~~~~~ 137 (212)
..++..+++ ||. +=| ..++.||+++|+|+|+-...+ ..... ..+ ..- ..|+.+......+ ..
T Consensus 469 ~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v-~~~~~~gi~V~~r~~~~--------~~ 536 (590)
T cd03793 469 EEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHI-EDPESYGIYIVDRRFKS--------PD 536 (590)
T ss_pred HHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHh-ccCCCceEEEecCCccc--------hH
Confidence 344555666 544 334 359999999999999987632 11111 122 211 2577775432111 11
Q ss_pred cCHHHHHHHHHHHhhcC
Q 036598 138 VRRDRVEKVVYQFMING 154 (212)
Q Consensus 138 ~~~~~l~~ai~~vl~~~ 154 (212)
.+.++|.+++.+++ +.
T Consensus 537 e~v~~La~~m~~~~-~~ 552 (590)
T cd03793 537 ESVQQLTQYMYEFC-QL 552 (590)
T ss_pred HHHHHHHHHHHHHh-CC
Confidence 34567888888887 63
No 143
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=76.94 E-value=41 Score=30.16 Aligned_cols=134 Identities=10% Similarity=0.091 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeec-------cChhhhcCCCCccceeecCChhhHHHH
Q 036598 15 QLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGW-------APQVLILNHPAVGGFMTHCGWNSVLES 87 (212)
Q Consensus 15 ~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~-------~p~~~il~~~~~~~~v~hgG~~sv~ea 87 (212)
....+++.|.+.++.|-..+.......+.....+......++...| .++..+...+++ ++|.-+-+||+.-.
T Consensus 21 k~~~lv~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~~V~~~~~~~~~~~~~~hi~l~~~aD~-~vVaPaTaNtlaKi 99 (399)
T PRK05579 21 KALELVRRLRKAGADVRVVMTEAAKKFVTPLTFQALSGNPVSTDLWDPAAEAAMGHIELAKWADL-VLIAPATADLIAKL 99 (399)
T ss_pred HHHHHHHHHHhCCCEEEEEECHhHHHHHhHHHHHHhhCCceEccccccccCCCcchhhcccccCE-EEEeeCCHHHHHHH
Confidence 3455667777778776555544332222211111111222322112 123333333443 46666666655443
Q ss_pred -------------HHcCCCeeccCccc----c---hhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 88 -------------VSSGVPMITWPLFA----E---QFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 88 -------------l~~GvP~i~iP~~~----D---Q~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
+.+++|+++.|-.. . ...|..++ ...|+-+.-...-.+.|.+++.+. ..+.++|...+
T Consensus 100 A~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L-~~~G~~ii~P~~g~la~~~~g~gr-~~~~~~I~~~~ 177 (399)
T PRK05579 100 AHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATL-RSRGVEIIGPASGRLACGDVGPGR-MAEPEEIVAAA 177 (399)
T ss_pred HcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHH-HHCCCEEECCCCccccCCCcCCCC-CCCHHHHHHHH
Confidence 56699999999532 2 24466677 445666554444445666666544 46788888888
Q ss_pred HHHh
Q 036598 148 YQFM 151 (212)
Q Consensus 148 ~~vl 151 (212)
.+.+
T Consensus 178 ~~~~ 181 (399)
T PRK05579 178 ERAL 181 (399)
T ss_pred HHHh
Confidence 7766
No 144
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=76.41 E-value=51 Score=28.69 Aligned_cols=128 Identities=13% Similarity=0.190 Sum_probs=77.3
Q ss_pred EeeCCCCCCCHHHHHHHHHHHh---hCCceEEEEEeC--CcccccchhHHH---hhcC-CCeEE-eeccC---hhhhcCC
Q 036598 3 VCFGSLCEFAESQLLEIALGLE---SSNICFIWVIKS--DAFLLLDKDFEE---RVKD-RGLII-KGWAP---QVLILNH 69 (212)
Q Consensus 3 vs~GS~~~~~~~~~~~~~~~l~---~~~~~viw~~~~--~~~~~lp~~~~~---~~~~-~~~~~-~~~~p---~~~il~~ 69 (212)
|=.|..+..+++++ +++.++. ..+++++.-++- +..+.. +.+.+ ..-+ .++.+ .+++| ...+|+.
T Consensus 149 IlvGNSgd~SN~Hi-e~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi-~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~ 226 (322)
T PRK02797 149 ILVGNSGDRSNRHI-EALRALHQQFGDNVKIIVPMGYPANNQAYI-EEVRQAGLALFGAENFQILTEKLPFDDYLALLRQ 226 (322)
T ss_pred EEEeCCCCCcccHH-HHHHHHHHHhCCCeEEEEECCcCCCCHHHH-HHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHh
Confidence 34566666555554 3444443 245566665554 221111 11211 1223 45554 45666 4568999
Q ss_pred CCccceeec--CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 70 PAVGGFMTH--CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 70 ~~~~~~v~h--gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
++++.|+++ =|.|++.-.+..|+|+++- .+-+++.... + .|+-+..+.+. ++...+.++=
T Consensus 227 ~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e-~gv~Vlf~~d~-------------L~~~~v~e~~ 288 (322)
T PRK02797 227 CDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-E-QGLPVLFTGDD-------------LDEDIVREAQ 288 (322)
T ss_pred CCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-h-CCCeEEecCCc-------------ccHHHHHHHH
Confidence 999888876 4789999999999999976 3445565544 4 37777666555 7777777764
Q ss_pred HHH
Q 036598 148 YQF 150 (212)
Q Consensus 148 ~~v 150 (212)
+++
T Consensus 289 rql 291 (322)
T PRK02797 289 RQL 291 (322)
T ss_pred HHH
Confidence 444
No 145
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=75.50 E-value=7.1 Score=33.38 Aligned_cols=82 Identities=13% Similarity=-0.031 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEee--ccCh-hhhcCCCCccceeecCChhhHHHH
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKG--WAPQ-VLILNHPAVGGFMTHCGWNSVLES 87 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~--~~p~-~~il~~~~~~~~v~hgG~~sv~ea 87 (212)
++.+.+.+++..+...++++++..|...+...-+.+.+. .+++.+.+ .+.+ ..+++++++ ||+.- .|.++=|
T Consensus 194 Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~~sL~elaali~~a~l--~I~nD-SGp~HlA 268 (322)
T PRK10964 194 WPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPKLSLEQVARVLAGAKA--VVSVD-TGLSHLT 268 (322)
T ss_pred CCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHcc--CCcceecCCCCHHHHHHHHHhCCE--EEecC-CcHHHHH
Confidence 788889999988877788877654543321111112111 11222222 2333 457778777 88864 4788889
Q ss_pred HHcCCCeecc
Q 036598 88 VSSGVPMITW 97 (212)
Q Consensus 88 l~~GvP~i~i 97 (212)
.+.|+|+|.+
T Consensus 269 ~A~g~p~val 278 (322)
T PRK10964 269 AALDRPNITL 278 (322)
T ss_pred HHhCCCEEEE
Confidence 9999999976
No 146
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=74.71 E-value=50 Score=29.55 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=69.6
Q ss_pred HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccCh------hhhcCCCCccceeecCChhhHHHH--
Q 036598 16 LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQ------VLILNHPAVGGFMTHCGWNSVLES-- 87 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~------~~il~~~~~~~~v~hgG~~sv~ea-- 87 (212)
...+++.|.+.++.|-..+.....+.+.....+......+....|.+. ..+...+++ .+|.-+-+||+.-.
T Consensus 19 ~~~ll~~L~~~g~~V~vv~T~~A~~fv~~~~l~~~~~~~v~~~~~~~~~~~~~hi~l~~~aD~-~vVaPaTanTlaKiA~ 97 (390)
T TIGR00521 19 TVELVRELVRQGAEVKVIMTEAAKKFITPLTLEALSGHKVVTELWGPIEHNALHIDLAKWADL-ILIAPATANTISKIAH 97 (390)
T ss_pred HHHHHHHHHhCCCEEEEEECHhHHHHHHHHHHHHhhCCceeehhccccccccchhhcccccCE-EEEecCCHHHHHHHHc
Confidence 445667777677776555544432222211111111112222112211 112233443 45666665544332
Q ss_pred -----------HHcCCCeeccCcccchh-------hHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH
Q 036598 88 -----------VSSGVPMITWPLFAEQF-------YNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ 149 (212)
Q Consensus 88 -----------l~~GvP~i~iP~~~DQ~-------~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 149 (212)
+.+-+|.++.|-..+.+ .|..++ ...|+-+.-...-.|.|.+++... ..+.++|...+.+
T Consensus 98 GiaDnLlt~~~~~~~~plviaPamn~~m~~~p~~~~Nl~~L-~~~G~~vv~P~~g~~ac~~~g~g~-~~~~~~i~~~v~~ 175 (390)
T TIGR00521 98 GIADDLVSTTALAASAPIILAPAMNENMYNNPAVQENIKRL-KDDGYIFIEPDSGLLACGDEGKGR-LAEPETIVKAAER 175 (390)
T ss_pred ccCCcHHHHHHHHhCCCEEEEeCCChhhcCCHHHHHHHHHH-HHCCcEEECCCCcccccccccCCC-CCCHHHHHHHHHH
Confidence 33449999999854433 366677 445666555555556667777544 3577888887777
Q ss_pred Hh
Q 036598 150 FM 151 (212)
Q Consensus 150 vl 151 (212)
.+
T Consensus 176 ~~ 177 (390)
T TIGR00521 176 EF 177 (390)
T ss_pred HH
Confidence 66
No 147
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.41 E-value=15 Score=30.55 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=47.3
Q ss_pred HHHHHHHHHh-h-CCceEEEEEeCCcccccchh-HHHhhcCCC-eEEeeccChhhhcCCCCccceeecCChhhHHHHHHc
Q 036598 15 QLLEIALGLE-S-SNICFIWVIKSDAFLLLDKD-FEERVKDRG-LIIKGWAPQVLILNHPAVGGFMTHCGWNSVLESVSS 90 (212)
Q Consensus 15 ~~~~~~~~l~-~-~~~~viw~~~~~~~~~lp~~-~~~~~~~~~-~~~~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~~ 90 (212)
.+..++..+. . ++..++++.-+.....-... +.+.....+ +.+.+-.+-..++.+++. +||-.+ ++-.||+.+
T Consensus 141 ~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~ 217 (269)
T PF05159_consen 141 DFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLH 217 (269)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHc
Confidence 3444444433 2 36787777655221000111 111112233 334445666788988887 777765 477899999
Q ss_pred CCCeeccCc
Q 036598 91 GVPMITWPL 99 (212)
Q Consensus 91 GvP~i~iP~ 99 (212)
|+|++++..
T Consensus 218 gkpVi~~G~ 226 (269)
T PF05159_consen 218 GKPVIVFGR 226 (269)
T ss_pred CCceEEecC
Confidence 999999864
No 148
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=73.64 E-value=75 Score=29.27 Aligned_cols=133 Identities=8% Similarity=0.048 Sum_probs=69.1
Q ss_pred HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-------ChhhhcCCCCccceeecCChhhHHH--
Q 036598 16 LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-------PQVLILNHPAVGGFMTHCGWNSVLE-- 86 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-------p~~~il~~~~~~~~v~hgG~~sv~e-- 86 (212)
...+++.|.+.+..|-..+......++.....+......++..-|- ++..+...+++ ++|.-+-+||+.-
T Consensus 86 a~~lvr~L~k~G~~V~VvmT~sA~~fv~p~~~~~ls~~~V~~d~~~~~~~~~~~Hi~la~~aD~-~vVAPATANTIAKiA 164 (475)
T PRK13982 86 ALDLIRRLKERGAHVRCVLTKAAQQFVTPLTASALSGQRVYTDLFDPESEFDAGHIRLARDCDL-IVVAPATADLMAKMA 164 (475)
T ss_pred HHHHHHHHHhCcCEEEEEECcCHHHHhhHHHHHHhcCCceEecCCCcccccCccchhhhhhcCE-EEEeeCCHHHHHHHH
Confidence 4456677777777765555443322222111111122223221121 23333333443 4566666655443
Q ss_pred -----------HHHcCCCeeccCcccch-------hhHHHHHHHHhcceeEeeccCCcc-ccccchhccccCHHHHHHHH
Q 036598 87 -----------SVSSGVPMITWPLFAEQ-------FYNENFVLTHWKIGVGVGVESGLA-WGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 87 -----------al~~GvP~i~iP~~~DQ-------~~na~~v~~~~g~G~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ai 147 (212)
.+..++|+++.|-.... ..|...+ ...|+-+.-...-.+. |.+++. +....+++|...+
T Consensus 165 ~GiADnLlt~v~La~~~PvliaPaMN~~M~~npat~~Nl~~L-~~~G~~vi~P~~g~lA~~g~~G~-Grm~e~~~I~~~v 242 (475)
T PRK13982 165 NGLADDLASAILLAANRPILLAPAMNPLMWNNPATRRNVAQL-KRDGVHMIGPNAGEMAERGEAGV-GRMAEPLEIAAAA 242 (475)
T ss_pred ccccCcHHHHHHHhcCCCEEEEEcCCHHHhcCHHHHHHHHHH-HHCCCEEECCCCCccccCCCcCC-CCCCCHHHHHHHH
Confidence 26679999999975433 3577777 4456655433322233 345554 3346778888888
Q ss_pred HHHh
Q 036598 148 YQFM 151 (212)
Q Consensus 148 ~~vl 151 (212)
.+.+
T Consensus 243 ~~~~ 246 (475)
T PRK13982 243 EALL 246 (475)
T ss_pred HHHH
Confidence 7766
No 149
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=73.27 E-value=12 Score=32.31 Aligned_cols=93 Identities=12% Similarity=0.194 Sum_probs=54.9
Q ss_pred EEeeCCCCC---CCHHHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhhcCCCeE-Eee--ccCh-hhhcCCCCcc
Q 036598 2 YVCFGSLCE---FAESQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERVKDRGLI-IKG--WAPQ-VLILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~---~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~-~~~--~~p~-~~il~~~~~~ 73 (212)
.|..|+... ++.+.+.+++..|...++++++.-++.. +..+-+.+.......++. +.+ .+.+ ..+++++++
T Consensus 185 ~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l- 263 (344)
T TIGR02201 185 VIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHARL- 263 (344)
T ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCCE-
Confidence 345555433 6778888899888777888776644332 111111222111111221 122 2333 357777777
Q ss_pred ceeecCChhhHHHHHHcCCCeecc
Q 036598 74 GFMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i~i 97 (212)
||+. -.|.++=|.+.|+|.|.+
T Consensus 264 -~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 264 -FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred -EEec-CCHHHHHHHHcCCCEEEE
Confidence 9987 567889999999999976
No 150
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=72.61 E-value=12 Score=33.96 Aligned_cols=103 Identities=18% Similarity=0.126 Sum_probs=57.0
Q ss_pred eeccChh---hhcCCCCccceee---cCCh-hhHHHHHHcCCC----eeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 58 KGWAPQV---LILNHPAVGGFMT---HCGW-NSVLESVSSGVP----MITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 58 ~~~~p~~---~il~~~~~~~~v~---hgG~-~sv~eal~~GvP----~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
..++++. .+++.+++ ||. +-|. .++.|++++|+| +|+--..+-- +...-|+.+..
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~--------~~~~~g~lv~p---- 411 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA--------EELSGALLVNP---- 411 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccch--------hhcCCCEEECC----
Confidence 3455654 35677777 553 3343 578999999999 4433222110 11134666654
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDL 193 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l 193 (212)
.+.+++.++|.+++ ++++ ++.+++.++..+.+. .-+....+..++.+|
T Consensus 412 -----------~d~~~la~ai~~~l-~~~~--~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 412 -----------YDIDEVADAIHRAL-TMPL--EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred -----------CCHHHHHHHHHHHH-cCCH--HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 46788999999999 7521 122222222223222 445555566666554
No 151
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.87 E-value=19 Score=31.34 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=42.0
Q ss_pred hhHHH-HHHcCCCeeccCcccchh--hHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH-HHhhcCccc
Q 036598 82 NSVLE-SVSSGVPMITWPLFAEQF--YNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY-QFMINGGEE 157 (212)
Q Consensus 82 ~sv~e-al~~GvP~i~iP~~~DQ~--~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~-~vl~~~~~~ 157 (212)
||..| ++-.|||+|.+|-.+-|+ ..|++-..-+|..+.+-.. ..+....+. +++ .|.++
T Consensus 320 GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~----------------~aq~a~~~~q~ll-~dp~r 382 (412)
T COG4370 320 GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP----------------EAQAAAQAVQELL-GDPQR 382 (412)
T ss_pred cchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC----------------chhhHHHHHHHHh-cChHH
Confidence 34433 466899999999998884 4566654556777776432 223344444 488 88666
Q ss_pred hHHHHHH
Q 036598 158 VEGMRKR 164 (212)
Q Consensus 158 ~~~~~~~ 164 (212)
...+|+|
T Consensus 383 ~~air~n 389 (412)
T COG4370 383 LTAIRHN 389 (412)
T ss_pred HHHHHhc
Confidence 6666654
No 152
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=71.00 E-value=13 Score=30.25 Aligned_cols=93 Identities=6% Similarity=0.100 Sum_probs=47.1
Q ss_pred EEeeCCCCC---CCHHHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhhcCCCeEEeec--cCh-hhhcCCCCccc
Q 036598 2 YVCFGSLCE---FAESQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGW--APQ-VLILNHPAVGG 74 (212)
Q Consensus 2 ~vs~GS~~~---~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~--~p~-~~il~~~~~~~ 74 (212)
.|..|+... ++.+...+++..|.+.++.|+...+... ++..-+.+........+.+.+- +.+ ..++.++++
T Consensus 109 ~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a~~-- 186 (247)
T PF01075_consen 109 GINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRADL-- 186 (247)
T ss_dssp EEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTSSE--
T ss_pred EEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcCCE--
Confidence 455565543 6788899999999888877654433322 1111111111111112333222 223 457777777
Q ss_pred eeecCChhhHHHHHHcCCCeecc
Q 036598 75 FMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~i 97 (212)
+|+.- .|.++=|.+.|+|+|.+
T Consensus 187 ~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 187 VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp EEEES-SHHHHHHHHTT--EEEE
T ss_pred EEecC-ChHHHHHHHHhCCEEEE
Confidence 88764 46788889999999988
No 153
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=70.09 E-value=20 Score=30.62 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=48.2
Q ss_pred HHHHHhhCCceEEEEEeCCcccccchhHHHhh-cCCCeEE----eeccChhhhcCCCCccceeecCChhhHHHHHHcCCC
Q 036598 19 IALGLESSNICFIWVIKSDAFLLLDKDFEERV-KDRGLII----KGWAPQVLILNHPAVGGFMTHCGWNSVLESVSSGVP 93 (212)
Q Consensus 19 ~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~-~~~~~~~----~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP 93 (212)
+.+.+++.+.+|+.+++......+..-+.... ..+.++. .++-|..+.|+.++. +++|--..|...||++.|+|
T Consensus 189 l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady-ii~TaDSinM~sEAasTgkP 267 (329)
T COG3660 189 LVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY-IISTADSINMCSEAASTGKP 267 (329)
T ss_pred HHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce-EEEecchhhhhHHHhccCCC
Confidence 44667788999999888765211111111111 1223332 135577788877665 34555567889999999999
Q ss_pred eecc
Q 036598 94 MITW 97 (212)
Q Consensus 94 ~i~i 97 (212)
+.+.
T Consensus 268 v~~~ 271 (329)
T COG3660 268 VFIL 271 (329)
T ss_pred eEEE
Confidence 9764
No 154
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=69.93 E-value=18 Score=31.43 Aligned_cols=93 Identities=10% Similarity=0.114 Sum_probs=54.6
Q ss_pred EEeeCCCCC---CCHHHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhhcCCC-eEEee--ccCh-hhhcCCCCcc
Q 036598 2 YVCFGSLCE---FAESQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERVKDRG-LIIKG--WAPQ-VLILNHPAVG 73 (212)
Q Consensus 2 ~vs~GS~~~---~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~-~~~~~--~~p~-~~il~~~~~~ 73 (212)
.|..|+... ++.+.+.++++.|...++++++.-++.. +...-+.+.+.....+ +-+.+ .+.+ ..+++++++
T Consensus 187 ~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l- 265 (352)
T PRK10422 187 VIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHAQL- 265 (352)
T ss_pred EEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhCCE-
Confidence 455566433 6888888999888777888776655432 1111111211111111 11222 2333 457777777
Q ss_pred ceeecCChhhHHHHHHcCCCeecc
Q 036598 74 GFMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i~i 97 (212)
||+.- .|.++=|.+.|+|+|.+
T Consensus 266 -~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 266 -FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred -EEecC-CHHHHHHHHcCCCEEEE
Confidence 88874 46788888999999866
No 155
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=63.56 E-value=26 Score=33.81 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=62.6
Q ss_pred EeeccChh---hhcCCCCccceeec---CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcccc
Q 036598 57 IKGWAPQV---LILNHPAVGGFMTH---CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWG 129 (212)
Q Consensus 57 ~~~~~p~~---~il~~~~~~~~v~h---gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 129 (212)
+..++++. .+++.+++ |+.- -|. .++.|++++|+|-...|...+----+..+ .-|+.++.
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P------- 412 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNP------- 412 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECC-------
Confidence 44566654 35666776 5443 343 58899999987633333222111111122 23777754
Q ss_pred ccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 130 EEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 130 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
.+.+++.++|.++| +.+. ++.+++..++.+.+. ..+....+.++++.+.+..
T Consensus 413 --------~d~~~la~ai~~~l-~~~~--~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~~ 464 (726)
T PRK14501 413 --------NDIEGIAAAIKRAL-EMPE--EEQRERMQAMQERLR-----RYDVHKWASDFLDELREAA 464 (726)
T ss_pred --------CCHHHHHHHHHHHH-cCCH--HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHHH
Confidence 57788999999998 6421 233333333333332 4556666777777776553
No 156
>PLN02470 acetolactate synthase
Probab=62.29 E-value=14 Score=34.60 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=55.6
Q ss_pred eeCCCCCCCHHH--HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-Chh-------hhcCCCCcc
Q 036598 4 CFGSLCEFAESQ--LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-PQV-------LILNHPAVG 73 (212)
Q Consensus 4 s~GS~~~~~~~~--~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-p~~-------~il~~~~~~ 73 (212)
+|||....+... ...+++.|++.|+..++-++......|-+.+. ..+++.+..-- .+. .-...-..+
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~l~dal~---~~~~i~~i~~rhE~~A~~~Adgyar~tg~~g 78 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASMEIHQALT---RSNCIRNVLCRHEQGEVFAAEGYAKASGKVG 78 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHh---ccCCceEEEeccHHHHHHHHHHHHHHhCCCE
Confidence 588887744433 45588999999999999988764111112221 12234332211 111 111223455
Q ss_pred ceeecCCh------hhHHHHHHcCCCeeccC
Q 036598 74 GFMTHCGW------NSVLESVSSGVPMITWP 98 (212)
Q Consensus 74 ~~v~hgG~------~sv~eal~~GvP~i~iP 98 (212)
++++|.|- +.+.+|...++|+|++.
T Consensus 79 v~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 79 VCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred EEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 58888884 58899999999999995
No 157
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=59.79 E-value=41 Score=31.08 Aligned_cols=55 Identities=11% Similarity=0.143 Sum_probs=36.2
Q ss_pred hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc
Q 036598 82 NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG 155 (212)
Q Consensus 82 ~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 155 (212)
-++.||+++|+|++..=-.+ -+..+ ...-.|..++..+ -....+.+++.++. .|+
T Consensus 380 iv~IEAMa~glPvvAt~~GG----P~EiV-~~~~tG~l~dp~~-------------e~~~~~a~~~~kl~-~~p 434 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNGG----PAEIV-VHGVTGLLIDPGQ-------------EAVAELADALLKLR-RDP 434 (495)
T ss_pred ceeHHHHhcCCCEEEecCCC----ceEEE-EcCCcceeeCCch-------------HHHHHHHHHHHHHh-cCH
Confidence 37889999999999873211 12233 3334577776533 33447999999999 883
No 158
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=59.60 E-value=78 Score=24.28 Aligned_cols=76 Identities=18% Similarity=0.232 Sum_probs=41.4
Q ss_pred HHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC--------hhhhcCCCCccceeecCCh------hhH
Q 036598 19 IALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP--------QVLILNHPAVGGFMTHCGW------NSV 84 (212)
Q Consensus 19 ~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p--------~~~il~~~~~~~~v~hgG~------~sv 84 (212)
+++.|.+.|+..++-++......|-+.+. ..+++.+...-. ...-... ....++++.|- +.+
T Consensus 3 l~~~L~~~Gi~~vFg~pG~~~~~l~~al~---~~~~i~~i~~rhE~~A~~mA~gyar~t-~~gv~~~t~GpG~~n~~~gl 78 (162)
T cd07038 3 LLERLKQLGVKHVFGVPGDYNLPLLDAIE---ENPGLRWVGNCNELNAGYAADGYARVK-GLGALVTTYGVGELSALNGI 78 (162)
T ss_pred HHHHHHHcCCCEEEEeCCccHHHHHHHHh---hcCCceEEeeCCHHHHHHHHHHHHHhh-CCEEEEEcCCccHHHHHHHH
Confidence 56777788888888776653111112221 122343322111 1110111 34446777663 578
Q ss_pred HHHHHcCCCeeccC
Q 036598 85 LESVSSGVPMITWP 98 (212)
Q Consensus 85 ~eal~~GvP~i~iP 98 (212)
.+|...++|+|++.
T Consensus 79 ~~A~~~~~Pvl~i~ 92 (162)
T cd07038 79 AGAYAEHVPVVHIV 92 (162)
T ss_pred HHHHHcCCCEEEEe
Confidence 89999999999995
No 159
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=58.88 E-value=17 Score=34.43 Aligned_cols=98 Identities=21% Similarity=0.242 Sum_probs=47.0
Q ss_pred hhhhcCCCCccceeecCC-h-hhHHHHHHcCCCeeccCccc-----chhhHHHHHHHHhcceeEeeccCCccccccchhc
Q 036598 63 QVLILNHPAVGGFMTHCG-W-NSVLESVSSGVPMITWPLFA-----EQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIG 135 (212)
Q Consensus 63 ~~~il~~~~~~~~v~hgG-~-~sv~eal~~GvP~i~iP~~~-----DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~ 135 (212)
..+++.-+++++|-+.== | -|-+||.++|+|.|+-=+.+ .+... .. ...|+-++-+... +
T Consensus 463 Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~-~~--~~~GV~VvdR~~~--n-------- 529 (633)
T PF05693_consen 463 YYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE-DP--EEYGVYVVDRRDK--N-------- 529 (633)
T ss_dssp HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS--HH--GGGTEEEE-SSSS-----------
T ss_pred HHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc-cC--cCCcEEEEeCCCC--C--------
Confidence 344455566655555211 2 38999999999999876631 11111 11 2235555444432 1
Q ss_pred cccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHH
Q 036598 136 VLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAK 173 (212)
Q Consensus 136 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~ 173 (212)
..-+.++|...+.+....+..+....|.+++++++.+-
T Consensus 530 ~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~d 567 (633)
T PF05693_consen 530 YDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLAD 567 (633)
T ss_dssp HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGB
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 11123344444444431223445577888888877653
No 160
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=58.78 E-value=1.3e+02 Score=26.63 Aligned_cols=130 Identities=12% Similarity=0.118 Sum_probs=79.8
Q ss_pred EeeCCCCCCCHHHHHHHHHHHhh---CCceEEEEEeCCc-ccccchhHH---Hhh-cCCCeEE-eeccCh---hhhcCCC
Q 036598 3 VCFGSLCEFAESQLLEIALGLES---SNICFIWVIKSDA-FLLLDKDFE---ERV-KDRGLII-KGWAPQ---VLILNHP 70 (212)
Q Consensus 3 vs~GS~~~~~~~~~~~~~~~l~~---~~~~viw~~~~~~-~~~lp~~~~---~~~-~~~~~~~-~~~~p~---~~il~~~ 70 (212)
|=.|-.+..+.+++. +++.+.+ .+.+++.=++-+. .+.--+.+. +.. ...++.+ .+++|. ..+|+.+
T Consensus 188 ILvGNSgd~sNnHie-aL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~c 266 (360)
T PF07429_consen 188 ILVGNSGDPSNNHIE-ALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRC 266 (360)
T ss_pred EEEcCCCCCCccHHH-HHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhC
Confidence 445666665665543 3444432 3567666554331 111011111 112 2345654 567774 5688999
Q ss_pred Cccceeec--CChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 71 AVGGFMTH--CGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 71 ~~~~~v~h--gG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
++.+|.+. =|.|++.-.+..|+|+++- .+-+.+-... +. |+-+....++ ++...|.++=+
T Consensus 267 Dl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~-~~-~ipVlf~~d~-------------L~~~~v~ea~r 328 (360)
T PF07429_consen 267 DLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLK-EQ-GIPVLFYGDE-------------LDEALVREAQR 328 (360)
T ss_pred CEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHH-hC-CCeEEecccc-------------CCHHHHHHHHH
Confidence 99887664 5789999999999999875 4455555554 43 7777766555 88888888877
Q ss_pred HHh
Q 036598 149 QFM 151 (212)
Q Consensus 149 ~vl 151 (212)
++.
T Consensus 329 ql~ 331 (360)
T PF07429_consen 329 QLA 331 (360)
T ss_pred HHh
Confidence 765
No 161
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=57.80 E-value=24 Score=29.82 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=21.3
Q ss_pred cceeecCChhhHHHHHH------cCCCeeccC
Q 036598 73 GGFMTHCGWNSVLESVS------SGVPMITWP 98 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~------~GvP~i~iP 98 (212)
+++|+-||-||++.++. .++|++.+.
T Consensus 37 Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 44999999999999975 477888774
No 162
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=57.55 E-value=97 Score=24.75 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=48.8
Q ss_pred CCCeEEeeccCh---hhhcCCCCccceeec---CCh-hhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKGWAPQ---VLILNHPAVGGFMTH---CGW-NSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~~~p~---~~il~~~~~~~~v~h---gG~-~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
.+++.+..+++. ..++..+++ ++.- .|. .++.|++++|+|+|..+.. .....+ ..-+.|.....
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~~~~~-- 326 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGLLVPP-- 326 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceEecCC--
Confidence 466777777772 335665655 4444 244 3469999999999776552 222333 32123663321
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
...+++..++..++ ++
T Consensus 327 -------------~~~~~~~~~i~~~~-~~ 342 (381)
T COG0438 327 -------------GDVEELADALEQLL-ED 342 (381)
T ss_pred -------------CCHHHHHHHHHHHh-cC
Confidence 24688999999998 76
No 163
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=55.82 E-value=48 Score=28.89 Aligned_cols=92 Identities=15% Similarity=0.180 Sum_probs=51.0
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCc-c-cccch-hHHHh-hcCCCeEEe-ec-------------cCh
Q 036598 2 YVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDA-F-LLLDK-DFEER-VKDRGLIIK-GW-------------APQ 63 (212)
Q Consensus 2 ~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~-~-~~lp~-~~~~~-~~~~~~~~~-~~-------------~p~ 63 (212)
+.+.||.+...|.. ++++.|...++.++|...... . +.+|+ ++.-. ....++... .+ .--
T Consensus 6 ~~~GGTGGHi~Pal--a~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (352)
T PRK12446 6 FTGGGSAGHVTPNL--AIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDA 83 (352)
T ss_pred EEcCCcHHHHHHHH--HHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHHHHH
Confidence 45667777655543 356777778999999875543 1 22332 11000 000011000 00 001
Q ss_pred hhhcC--CCCccceeecCChhh---HHHHHHcCCCeecc
Q 036598 64 VLILN--HPAVGGFMTHCGWNS---VLESVSSGVPMITW 97 (212)
Q Consensus 64 ~~il~--~~~~~~~v~hgG~~s---v~eal~~GvP~i~i 97 (212)
..++. .|++ ++++||+-| +..+...|+|.++.
T Consensus 84 ~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 84 YVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 12333 3666 999999886 89999999999875
No 164
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=55.32 E-value=95 Score=28.70 Aligned_cols=110 Identities=11% Similarity=-0.006 Sum_probs=66.6
Q ss_pred EEeeccChhh---hcCCCCccce-eecCChh-hHHHHHHcCC----CeeccCcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 56 IIKGWAPQVL---ILNHPAVGGF-MTHCGWN-SVLESVSSGV----PMITWPLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 56 ~~~~~~p~~~---il~~~~~~~~-v~hgG~~-sv~eal~~Gv----P~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
.+...+|+.. ++..+++.++ =.+-|+| ...|.++++. |.|.--+. -+. +.+.-++.+++
T Consensus 365 ~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Gaa---~~l~~AllVNP---- 432 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GAA---VELKGALLTNP---- 432 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cch---hhcCCCEEECC----
Confidence 3455667554 5566776322 1255777 4559998877 44443332 111 33455777765
Q ss_pred cccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQ 196 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~ 196 (212)
.+.++++++|.+.| +.+ .++-++|.+++.+.++ ..+....+..++++|..+
T Consensus 433 -----------~d~~~~A~ai~~AL-~m~--~~Er~~R~~~l~~~v~-----~~d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 433 -----------YDPVRMDETIYVAL-AMP--KAEQQARMREMFDAVN-----YYDVQRWADEFLAAVSPQ 483 (487)
T ss_pred -----------CCHHHHHHHHHHHH-cCC--HHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhhhc
Confidence 67889999999999 641 2344555555555554 445666778888887654
No 165
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=54.78 E-value=16 Score=28.48 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=21.6
Q ss_pred CCCCccceeecCChhhHHHHHHcCCCeeccCccc
Q 036598 68 NHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFA 101 (212)
Q Consensus 68 ~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~ 101 (212)
.+..++++|++||...+..... ++|+|-+|...
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 3455566999999888888776 99999999853
No 166
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=53.61 E-value=4.2 Score=28.68 Aligned_cols=15 Identities=13% Similarity=0.211 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHH
Q 036598 159 EGMRKRARKLSELAK 173 (212)
Q Consensus 159 ~~~~~~a~~l~~~~~ 173 (212)
..++++..++.+.+.
T Consensus 15 ~~~~~~~~~l~~~vl 29 (94)
T PF07319_consen 15 RNFEERYEQLKQEVL 29 (94)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHH
Confidence 445555555544443
No 167
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=52.05 E-value=42 Score=28.93 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=52.8
Q ss_pred EEeeCCCC----CCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCC---C-eEEee--ccCh-hhhcCCC
Q 036598 2 YVCFGSLC----EFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDR---G-LIIKG--WAPQ-VLILNHP 70 (212)
Q Consensus 2 ~vs~GS~~----~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~---~-~~~~~--~~p~-~~il~~~ 70 (212)
.|..|+.. .++.+.+.++++.|...+++++.. |...+...-+.+....... + +.+.+ .+.+ ..+++++
T Consensus 184 ~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a 262 (348)
T PRK10916 184 GFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAAC 262 (348)
T ss_pred EEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhC
Confidence 45666642 278888999998887668887755 4332111111121111111 1 11212 1233 3477777
Q ss_pred CccceeecCChhhHHHHHHcCCCeecc
Q 036598 71 AVGGFMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 71 ~~~~~v~hgG~~sv~eal~~GvP~i~i 97 (212)
++ ||+.- .|.++=|.+.|+|+|.+
T Consensus 263 ~l--~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 263 KA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred CE--EEecC-ChHHHHHHHhCCCEEEE
Confidence 77 88753 57888899999999865
No 168
>COG1422 Predicted membrane protein [Function unknown]
Probab=51.91 E-value=58 Score=26.36 Aligned_cols=72 Identities=13% Similarity=0.186 Sum_probs=49.8
Q ss_pred hhHHHHHHcCCCeeccCcccchhh-HHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHH
Q 036598 82 NSVLESVSSGVPMITWPLFAEQFY-NENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEG 160 (212)
Q Consensus 82 ~sv~eal~~GvP~i~iP~~~DQ~~-na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 160 (212)
+++.++++-+.-.+..|+..-++. ..-.+ -. + ...-+...+.+.+ .|-|+.++
T Consensus 23 ~~~~~~i~~~ln~~f~P~i~~~~p~lvilV-~a----v--------------------i~gl~~~i~~~~l-iD~ekm~~ 76 (201)
T COG1422 23 SSIRDGIGGALNVVFGPLLSPLPPHLVILV-AA----V--------------------ITGLYITILQKLL-IDQEKMKE 76 (201)
T ss_pred HHHHHHHHHHHHHHHhhhccccccHHHHHH-HH----H--------------------HHHHHHHHHHHHh-ccHHHHHH
Confidence 467777777777778887655433 34444 21 1 1123566777888 88899999
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 036598 161 MRKRARKLSELAKIAVSKGG 180 (212)
Q Consensus 161 ~~~~a~~l~~~~~~~~~~~g 180 (212)
+++.++++.+.++++ ++.+
T Consensus 77 ~qk~m~efq~e~~eA-~~~~ 95 (201)
T COG1422 77 LQKMMKEFQKEFREA-QESG 95 (201)
T ss_pred HHHHHHHHHHHHHHH-HHhC
Confidence 999999999999988 4444
No 169
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=49.13 E-value=1.4e+02 Score=25.49 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=35.0
Q ss_pred cceeecCChhhHHHHHH----cCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 73 GGFMTHCGWNSVLESVS----SGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~----~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
.++|+=||-||+++++. .++|++.+... .+|... .+..+++.+++.
T Consensus 64 d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl~----------------~~~~~~~~~~l~ 113 (295)
T PRK01231 64 DLVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFLT----------------DIRPDELEFKLA 113 (295)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------cccccc----------------cCCHHHHHHHHH
Confidence 34999999999999864 36677776441 123222 156788888888
Q ss_pred HHhhcC
Q 036598 149 QFMING 154 (212)
Q Consensus 149 ~vl~~~ 154 (212)
+++ ++
T Consensus 114 ~~~-~g 118 (295)
T PRK01231 114 EVL-DG 118 (295)
T ss_pred HHH-cC
Confidence 888 63
No 170
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=48.81 E-value=87 Score=26.69 Aligned_cols=82 Identities=12% Similarity=0.103 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeE-Eee--ccCh-hhhcCCCCccceeecCChhhHHH
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLI-IKG--WAPQ-VLILNHPAVGGFMTHCGWNSVLE 86 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~-~~~--~~p~-~~il~~~~~~~~v~hgG~~sv~e 86 (212)
++.+.+.++++.+.+.+.+++.. |...+...-+.+.+.. ..++. +.+ .+.+ ..+++++++ +|+.- .|.++=
T Consensus 191 Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~~~~~~i~~~~-~~~~~~l~g~~sL~el~ali~~a~l--~I~~D-SGp~Hl 265 (334)
T TIGR02195 191 WPHEHYAELAKRLIDQGYQVVLF-GSAKDHPAGNEIEALL-PGELRNLAGETSLDEAVDLIALAKA--VVTND-SGLMHV 265 (334)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEE-EChhhHHHHHHHHHhC-CcccccCCCCCCHHHHHHHHHhCCE--EEeeC-CHHHHH
Confidence 78888889998887767887755 4433111111221111 11111 111 2233 457777777 88864 467888
Q ss_pred HHHcCCCeecc
Q 036598 87 SVSSGVPMITW 97 (212)
Q Consensus 87 al~~GvP~i~i 97 (212)
|.+.|+|+|.+
T Consensus 266 AaA~~~P~i~l 276 (334)
T TIGR02195 266 AAALNRPLVAL 276 (334)
T ss_pred HHHcCCCEEEE
Confidence 88999999965
No 171
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=47.77 E-value=13 Score=32.40 Aligned_cols=115 Identities=10% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCeEEee-ccChhhhcCCCCccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcccccc
Q 036598 53 RGLIIKG-WAPQVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEE 131 (212)
Q Consensus 53 ~~~~~~~-~~p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 131 (212)
.++...+ ..+-..+|..+++ +||-- .+.+.|.++.++|+|....-.|..... .|. ..+-.+ +-
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~------rg~--~~~~~~---~~-- 315 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKE------RGF--YFDYEE---DL-- 315 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT------SSB--SS-TTT---SS--
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhc------cCC--CCchHh---hC--
Confidence 4554433 3345678888887 99987 458899999999999877655544211 122 221100 00
Q ss_pred chhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036598 132 EKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLI 190 (212)
Q Consensus 132 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li 190 (212)
.+....+.++|.++|..++ +++ ..++++-++..+++-. -..|.+...+.+.|
T Consensus 316 -pg~~~~~~~eL~~~i~~~~-~~~---~~~~~~~~~~~~~~~~--~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 316 -PGPIVYNFEELIEAIENII-ENP---DEYKEKREKFRDKFFK--YNDGNSSERIVNYI 367 (369)
T ss_dssp -SS-EESSHHHHHHHHTTHH-HHH---HHTHHHHHHHHHHHST--T--S-HHHHHHHHH
T ss_pred -CCceeCCHHHHHHHHHhhh-hCC---HHHHHHHHHHHHHhCC--CCCchHHHHHHHHH
Confidence 0011256788999999888 642 3445555555665542 22444444444443
No 172
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=47.74 E-value=39 Score=26.18 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=42.2
Q ss_pred HHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC-hhhh-------cCCCCccceeecCCh------hhH
Q 036598 19 IALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP-QVLI-------LNHPAVGGFMTHCGW------NSV 84 (212)
Q Consensus 19 ~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-~~~i-------l~~~~~~~~v~hgG~------~sv 84 (212)
+++.|++.|+..++-++......|-+.+. ..+++.+...-. +... ...-....+++|+|- +.+
T Consensus 3 l~~~L~~~Gv~~vFg~pG~~~~~l~~al~---~~~~i~~v~~rhE~~A~~mAdgyar~sg~~gv~~~t~GpG~~n~~~gl 79 (162)
T cd07037 3 LVEELKRLGVRDVVISPGSRSAPLALAAA---EHPEFRLHVRVDERSAAFFALGLAKASGRPVAVVCTSGTAVANLLPAV 79 (162)
T ss_pred HHHHHHHCCCCEEEECCCcchHHHHHHHH---hCCCceEEeccChHHHHHHHHHHHHhhCCCEEEEECCchHHHHHhHHH
Confidence 56777778888888776653111112221 123343322111 1110 011223347888884 578
Q ss_pred HHHHHcCCCeeccC
Q 036598 85 LESVSSGVPMITWP 98 (212)
Q Consensus 85 ~eal~~GvP~i~iP 98 (212)
.+|...++|+|++.
T Consensus 80 ~~A~~~~~Pvl~i~ 93 (162)
T cd07037 80 VEAYYSGVPLLVLT 93 (162)
T ss_pred HHHHhcCCCEEEEE
Confidence 89999999999994
No 173
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=46.94 E-value=60 Score=28.03 Aligned_cols=93 Identities=11% Similarity=0.062 Sum_probs=53.2
Q ss_pred CEEeeC-CC---CCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCC-eEEeeccCh-hhhcCCCCccc
Q 036598 1 LYVCFG-SL---CEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRG-LIIKGWAPQ-VLILNHPAVGG 74 (212)
Q Consensus 1 V~vs~G-S~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~-~~~~~~~p~-~~il~~~~~~~ 74 (212)
|.++.| |. -.++.+.+.++++.+.+.++++++. +++.+...-+.+.+.....- +.-..-+.+ ..+++++++
T Consensus 178 i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~-g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l-- 254 (334)
T COG0859 178 IVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF-GGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL-- 254 (334)
T ss_pred EEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe-cChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE--
Confidence 345666 33 2378899999999999888665554 43332111112221111110 111122334 346667776
Q ss_pred eeecCChhhHHHHHHcCCCeecc
Q 036598 75 FMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 75 ~v~hgG~~sv~eal~~GvP~i~i 97 (212)
||+. -.|-++=|.+.|+|.|.+
T Consensus 255 ~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 255 VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred EEcc-CChHHHHHHHcCCCEEEE
Confidence 7765 346778888899999976
No 174
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.41 E-value=45 Score=28.49 Aligned_cols=26 Identities=4% Similarity=-0.050 Sum_probs=20.0
Q ss_pred cceeecCChhhHHHHHH----cCCCeeccC
Q 036598 73 GGFMTHCGWNSVLESVS----SGVPMITWP 98 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~----~GvP~i~iP 98 (212)
+++|+-||-||++.++. .++|++.+-
T Consensus 66 Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN 95 (287)
T PRK14077 66 DFLISLGGDGTLISLCRKAAEYDKFVLGIH 95 (287)
T ss_pred CEEEEECCCHHHHHHHHHhcCCCCcEEEEe
Confidence 44999999999998755 367777663
No 175
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=46.33 E-value=34 Score=26.69 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=25.0
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEE
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVI 34 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~ 34 (212)
+|+++||-.......+...+.+|.+.+..-++..
T Consensus 4 vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 4 VYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 6999999998777778888888877654323343
No 176
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.83 E-value=50 Score=28.28 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=20.7
Q ss_pred cceeecCChhhHHHHHH----cCCCeeccC
Q 036598 73 GGFMTHCGWNSVLESVS----SGVPMITWP 98 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~----~GvP~i~iP 98 (212)
+++|+=||-||++.++. .++|++.+-
T Consensus 66 dlvi~lGGDGT~L~aa~~~~~~~~PilGIN 95 (292)
T PRK01911 66 DMVISIGGDGTFLRTATYVGNSNIPILGIN 95 (292)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEe
Confidence 44999999999999876 367877763
No 177
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=44.32 E-value=46 Score=28.45 Aligned_cols=26 Identities=23% Similarity=0.190 Sum_probs=20.4
Q ss_pred cceeecCChhhHHHHHHc----CCCeeccC
Q 036598 73 GGFMTHCGWNSVLESVSS----GVPMITWP 98 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~----GvP~i~iP 98 (212)
+++|+-||-||+++++.. ++|++.+-
T Consensus 65 d~vi~~GGDGt~l~~~~~~~~~~~pilGIn 94 (291)
T PRK02155 65 DLAVVLGGDGTMLGIGRQLAPYGVPLIGIN 94 (291)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEc
Confidence 449999999999999763 66777663
No 178
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=44.27 E-value=1.6e+02 Score=23.20 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=35.1
Q ss_pred cCCCeeccCccc----ch---hhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHH
Q 036598 90 SGVPMITWPLFA----EQ---FYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQ 149 (212)
Q Consensus 90 ~GvP~i~iP~~~----DQ---~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 149 (212)
.++|+++.|-.. +. ..|-..+ ++.|+-+.-.....+.|.+++. +.....++|...+.+
T Consensus 111 ~~~pv~i~PaMn~~M~~~p~~~~nl~~L-~~~G~~vi~P~~g~la~g~~g~-g~~~~~~~i~~~~~~ 175 (177)
T TIGR02113 111 PETPKLIAPAMNTKMYQNPITQRNIKIL-KKIGYQEIQPKESLLACGDYGR-GALADLDDILQTIKE 175 (177)
T ss_pred CCCCEEEEeCCCHHHhCCHHHHHHHHHH-HHCCCEEECCCcCcccCCCccc-cCCCCHHHHHHHHHH
Confidence 489999999532 22 3466667 5557655544444455666664 334566777766654
No 179
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.04 E-value=41 Score=29.02 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=21.5
Q ss_pred ccceeecCChhhHHHHHHc----CCCeeccC
Q 036598 72 VGGFMTHCGWNSVLESVSS----GVPMITWP 98 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~~----GvP~i~iP 98 (212)
++++|+=||-||++.+... ++|++.+-
T Consensus 69 ~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN 99 (305)
T PRK02649 69 MKFAIVLGGDGTVLSAARQLAPCGIPLLTIN 99 (305)
T ss_pred cCEEEEEeCcHHHHHHHHHhcCCCCcEEEEe
Confidence 4559999999999998664 67877773
No 180
>PLN02929 NADH kinase
Probab=43.12 E-value=36 Score=29.40 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=40.4
Q ss_pred cceeecCChhhHHHHHH---cCCCeeccCccc------chhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHH
Q 036598 73 GGFMTHCGWNSVLESVS---SGVPMITWPLFA------EQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRV 143 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~---~GvP~i~iP~~~------DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (212)
+++|+-||-||++.+.. .++|++.+-... .+++|.-- +....|.... ++.+++
T Consensus 66 Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~--~~r~lGfL~~----------------~~~~~~ 127 (301)
T PLN02929 66 DLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD--ARRSTGHLCA----------------ATAEDF 127 (301)
T ss_pred CEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc--cccCcccccc----------------CCHHHH
Confidence 44999999999998854 467887764421 12222211 1113565553 567889
Q ss_pred HHHHHHHhhcC
Q 036598 144 EKVVYQFMING 154 (212)
Q Consensus 144 ~~ai~~vl~~~ 154 (212)
.+++.+++ ++
T Consensus 128 ~~~L~~il-~g 137 (301)
T PLN02929 128 EQVLDDVL-FG 137 (301)
T ss_pred HHHHHHHH-cC
Confidence 99999998 64
No 181
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=42.96 E-value=40 Score=26.37 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=18.9
Q ss_pred hhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 104 FYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 104 ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
+.+-..+.+..|+|+.+ |+|+|.++|.+++
T Consensus 101 ~~d~~~Fe~~cGVGV~V------------------T~E~I~~~V~~~i 130 (164)
T PF04558_consen 101 PIDVAEFEKACGVGVVV------------------TPEQIEAAVEKYI 130 (164)
T ss_dssp G--HHHHHHTTTTT----------------------HHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCeEE------------------CHHHHHHHHHHHH
Confidence 34444444667999877 8899999999998
No 182
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.85 E-value=56 Score=28.04 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=36.2
Q ss_pred ccceeecCChhhHHHHHH----cCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 72 VGGFMTHCGWNSVLESVS----SGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~----~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
++++|+=||-||++.+.. .++|++.+-.. .+|.... ++.+++.+++
T Consensus 69 ~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~~----------------~~~~~~~~~l 118 (296)
T PRK04539 69 CDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLTQ----------------IPREYMTDKL 118 (296)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEeec----------------cCHHHHHHHH
Confidence 344999999999999864 36788777321 1344442 5677888888
Q ss_pred HHHhhcC
Q 036598 148 YQFMING 154 (212)
Q Consensus 148 ~~vl~~~ 154 (212)
.+++ ++
T Consensus 119 ~~i~-~g 124 (296)
T PRK04539 119 LPVL-EG 124 (296)
T ss_pred HHHH-cC
Confidence 8888 64
No 183
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=41.03 E-value=36 Score=28.70 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=24.0
Q ss_pred CEEeeCCCCCCCHH-HHHHHHHHHhh--CCceEEEEEeCC
Q 036598 1 LYVCFGSLCEFAES-QLLEIALGLES--SNICFIWVIKSD 37 (212)
Q Consensus 1 V~vs~GS~~~~~~~-~~~~~~~~l~~--~~~~viw~~~~~ 37 (212)
|++||||...-..+ .+..+.+.++. +++.|.|++.+.
T Consensus 4 llvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 4 LLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 57999999885554 67777777664 689999998775
No 184
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=40.86 E-value=57 Score=27.61 Aligned_cols=71 Identities=13% Similarity=0.228 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCChhhHHHHHHc--C
Q 036598 14 SQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCGWNSVLESVSS--G 91 (212)
Q Consensus 14 ~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~~--G 91 (212)
+...++.+++....+..||.+..... -..+.++++...+-.+|+. |+=..-..+++-+++. |
T Consensus 49 ~Ra~dL~~a~~d~~i~aI~~~rGG~g--------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~~l~~~~g 112 (282)
T cd07025 49 ERAADLNAAFADPEIKAIWCARGGYG--------------ANRLLPYLDYDLIRANPKI--FVGYSDITALHLALYAKTG 112 (282)
T ss_pred HHHHHHHHHhhCCCCCEEEEcCCcCC--------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHHHHHHHhcC
Confidence 33555666666666666666554420 0123344555544466666 8877777777777653 7
Q ss_pred CCeeccCcc
Q 036598 92 VPMITWPLF 100 (212)
Q Consensus 92 vP~i~iP~~ 100 (212)
++.+.-|..
T Consensus 113 ~~t~hGp~~ 121 (282)
T cd07025 113 LVTFHGPML 121 (282)
T ss_pred ceEEECccc
Confidence 787777764
No 185
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.87 E-value=59 Score=28.07 Aligned_cols=52 Identities=13% Similarity=0.228 Sum_probs=36.1
Q ss_pred ccceeecCChhhHHHHHH----cCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 72 VGGFMTHCGWNSVLESVS----SGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~----~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
+.++|+=||-||++.+.. .++|++.+... .+|.... ...+++.+++
T Consensus 73 ~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~~----------------~~~~~~~~~l 122 (306)
T PRK03372 73 CELVLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLAE----------------AEAEDLDEAV 122 (306)
T ss_pred CCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceecc----------------CCHHHHHHHH
Confidence 344999999999999865 37788877541 2344332 4567788888
Q ss_pred HHHhhcC
Q 036598 148 YQFMING 154 (212)
Q Consensus 148 ~~vl~~~ 154 (212)
.+++ ++
T Consensus 123 ~~i~-~g 128 (306)
T PRK03372 123 ERVV-DR 128 (306)
T ss_pred HHHH-cC
Confidence 8887 63
No 186
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=39.19 E-value=68 Score=29.84 Aligned_cols=90 Identities=18% Similarity=0.125 Sum_probs=51.7
Q ss_pred eeCCCCCCCH-HHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-Chhh---------hcCCCCc
Q 036598 4 CFGSLCEFAE-SQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-PQVL---------ILNHPAV 72 (212)
Q Consensus 4 s~GS~~~~~~-~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-p~~~---------il~~~~~ 72 (212)
|-||...... +-...+++.|.+.|+..++.++......|-+.+. ..+++.+..-- .+.. +-..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~L~~~GV~~vFgvpG~~~~~l~dal~---~~~~i~~i~~~hE~~A~~~Adgyar~tg~~gv 79 (564)
T PRK08155 3 SSGTTSTRKRFTGAELIVRLLERQGIRIVTGIPGGAILPLYDALS---QSTQIRHILARHEQGAGFIAQGMARTTGKPAV 79 (564)
T ss_pred CCCCCccCCcccHHHHHHHHHHHcCCCEEEeCCCcccHHHHHHHh---ccCCceEEEeccHHHHHHHHHHHHHHcCCCeE
Confidence 4455554333 3355678899999999999887764111112221 12234332211 1111 1123443
Q ss_pred cceeecCCh------hhHHHHHHcCCCeeccC
Q 036598 73 GGFMTHCGW------NSVLESVSSGVPMITWP 98 (212)
Q Consensus 73 ~~~v~hgG~------~sv~eal~~GvP~i~iP 98 (212)
+++|.|- +.+.+|...++|+|++.
T Consensus 80 --~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 80 --CMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred --EEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 7777773 58999999999999884
No 187
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=38.81 E-value=1.1e+02 Score=22.90 Aligned_cols=77 Identities=10% Similarity=0.113 Sum_probs=42.0
Q ss_pred HHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccCh--------hhhcCCCCccceeecCCh------hhH
Q 036598 19 IALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQ--------VLILNHPAVGGFMTHCGW------NSV 84 (212)
Q Consensus 19 ~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~--------~~il~~~~~~~~v~hgG~------~sv 84 (212)
+++.|.+.|+..++.++......+.+.+ ..+++.+...... ..-+..-+..++++|.|. +.+
T Consensus 3 i~~~L~~~Gv~~vfg~pg~~~~~l~~~~----~~~~~~~i~~~~E~~A~~~A~g~~~~~~~~~v~~~~~gpG~~n~~~~l 78 (155)
T cd07035 3 LVEALKAEGVDHVFGVPGGAILPLLDAL----ARSGIRYILVRHEQGAVGMADGYARATGKPGVVLVTSGPGLTNAVTGL 78 (155)
T ss_pred HHHHHHHcCCCEEEECCCCchHHHHHHh----ccCCCEEEEeCCHHHHHHHHHHHHHHHCCCEEEEEcCCCcHHHHHHHH
Confidence 5677888888888877664311111221 1223333222111 111111223348888663 588
Q ss_pred HHHHHcCCCeeccCc
Q 036598 85 LESVSSGVPMITWPL 99 (212)
Q Consensus 85 ~eal~~GvP~i~iP~ 99 (212)
.++...++|+|++.-
T Consensus 79 ~~A~~~~~Pll~i~~ 93 (155)
T cd07035 79 ANAYLDSIPLLVITG 93 (155)
T ss_pred HHHHhhCCCEEEEeC
Confidence 899999999999853
No 188
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.68 E-value=59 Score=27.83 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=34.7
Q ss_pred ccceeecCChhhHHHHHH----cCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 72 VGGFMTHCGWNSVLESVS----SGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~----~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
++++|+=||-||++.++. +++|++.+-.. .+|..-. +.++++.+++
T Consensus 64 ~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl~~----------------~~~~~~~~~l 113 (292)
T PRK03378 64 ADLAIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFLTD----------------LDPDNALQQL 113 (292)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCcccc----------------cCHHHHHHHH
Confidence 344999999999999974 36677666331 1233221 5667888888
Q ss_pred HHHhhcC
Q 036598 148 YQFMING 154 (212)
Q Consensus 148 ~~vl~~~ 154 (212)
.+++ ++
T Consensus 114 ~~i~-~g 119 (292)
T PRK03378 114 SDVL-EG 119 (292)
T ss_pred HHHH-cC
Confidence 8887 63
No 189
>PRK13059 putative lipid kinase; Reviewed
Probab=38.59 E-value=87 Score=26.51 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=21.5
Q ss_pred cceeecCChhhHHHHH---H---cCCCeeccCc
Q 036598 73 GGFMTHCGWNSVLESV---S---SGVPMITWPL 99 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal---~---~GvP~i~iP~ 99 (212)
+.+|.-||-||+.|.+ . .++|+-++|.
T Consensus 58 d~vi~~GGDGTv~evv~gl~~~~~~~~lgviP~ 90 (295)
T PRK13059 58 KYILIAGGDGTVDNVVNAMKKLNIDLPIGILPV 90 (295)
T ss_pred CEEEEECCccHHHHHHHHHHhcCCCCcEEEECC
Confidence 3499999999988874 2 3588899997
No 190
>PRK11914 diacylglycerol kinase; Reviewed
Probab=38.26 E-value=1.1e+02 Score=26.00 Aligned_cols=26 Identities=12% Similarity=0.267 Sum_probs=22.0
Q ss_pred ceeecCChhhHHHHH----HcCCCeeccCc
Q 036598 74 GFMTHCGWNSVLESV----SSGVPMITWPL 99 (212)
Q Consensus 74 ~~v~hgG~~sv~eal----~~GvP~i~iP~ 99 (212)
.+|.-||-||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 499999999999986 34788999996
No 191
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=38.19 E-value=1.8e+02 Score=22.26 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=44.3
Q ss_pred HHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccCh----------hhhcCCCCccceeecCCh------
Q 036598 18 EIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQ----------VLILNHPAVGGFMTHCGW------ 81 (212)
Q Consensus 18 ~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~----------~~il~~~~~~~~v~hgG~------ 81 (212)
.+++.|++.|+..++.++......+-+.+. ...++.+...-.. ...-..+.+ +++|.|-
T Consensus 5 ~l~~~L~~~Gv~~vFgipG~~~~~l~~al~---~~~~i~~v~~rhE~~A~~mA~gyar~tg~~~v--~~~t~GpG~~n~~ 79 (164)
T cd07039 5 VIVETLENWGVKRVYGIPGDSINGLMDALR---REGKIEFIQVRHEEAAAFAASAEAKLTGKLGV--CLGSSGPGAIHLL 79 (164)
T ss_pred HHHHHHHHCCCCEEEEcCCCchHHHHHHHh---hcCCCeEEEeCCHHHHHHHHHHHHHHhCCCEE--EEECCCCcHHHHH
Confidence 466788888999888877664111112221 1133433222111 111123444 7888774
Q ss_pred hhHHHHHHcCCCeeccC
Q 036598 82 NSVLESVSSGVPMITWP 98 (212)
Q Consensus 82 ~sv~eal~~GvP~i~iP 98 (212)
+.+.+|...++|+|++.
T Consensus 80 ~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 80 NGLYDAKRDRAPVLAIA 96 (164)
T ss_pred HHHHHHHhcCCCEEEEe
Confidence 58899999999999995
No 192
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=38.04 E-value=1.3e+02 Score=27.57 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=56.1
Q ss_pred hcCCCCccceeecCCh--------------hhHHHHHHcCCCeecc-----CcccchhhHHHHHHHHhcceeEeeccCCc
Q 036598 66 ILNHPAVGGFMTHCGW--------------NSVLESVSSGVPMITW-----PLFAEQFYNENFVLTHWKIGVGVGVESGL 126 (212)
Q Consensus 66 il~~~~~~~~v~hgG~--------------~sv~eal~~GvP~i~i-----P~~~DQ~~na~~v~~~~g~G~~~~~~~~~ 126 (212)
|-.|+-++++||--|. .++.|--.-|+|.|++ |...+-..-+..+.++.++-+..-.
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvn---- 216 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVN---- 216 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEee----
Confidence 3468999999999884 3788888999999986 5555656667777677777665522
Q ss_pred cccccchhccccCHHHHHHHHHHHh
Q 036598 127 AWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
|.+ ++.++|...++++|
T Consensus 217 -c~~-------l~~~DI~~Il~~vL 233 (492)
T PF09547_consen 217 -CEQ-------LREEDITRILEEVL 233 (492)
T ss_pred -hHH-------cCHHHHHHHHHHHH
Confidence 222 88999999999987
No 193
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.70 E-value=68 Score=27.18 Aligned_cols=51 Identities=16% Similarity=0.278 Sum_probs=34.3
Q ss_pred cceeecCChhhHHHHHHc-CCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 73 GGFMTHCGWNSVLESVSS-GVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~-GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
+++|+=||-||++.++.. .+|++.+-. =.+|.... ++.+++.+++.+++
T Consensus 54 D~vi~lGGDGT~L~a~~~~~~PilGIN~--------------G~lGFL~~----------------~~~~~~~~~l~~i~ 103 (271)
T PRK01185 54 DVIITIGGDGTILRTLQRAKGPILGINM--------------GGLGFLTE----------------IEIDEVGSAIKKLI 103 (271)
T ss_pred CEEEEEcCcHHHHHHHHHcCCCEEEEEC--------------CCCccCcc----------------cCHHHHHHHHHHHH
Confidence 449999999999998773 456655522 01233321 56788888888888
Q ss_pred hcC
Q 036598 152 ING 154 (212)
Q Consensus 152 ~~~ 154 (212)
++
T Consensus 104 -~g 105 (271)
T PRK01185 104 -RG 105 (271)
T ss_pred -cC
Confidence 64
No 194
>PRK13057 putative lipid kinase; Reviewed
Probab=36.98 E-value=1.2e+02 Score=25.48 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=21.7
Q ss_pred ceeecCChhhHHHHH----HcCCCeeccCc
Q 036598 74 GFMTHCGWNSVLESV----SSGVPMITWPL 99 (212)
Q Consensus 74 ~~v~hgG~~sv~eal----~~GvP~i~iP~ 99 (212)
.+|.-||-||+.|.+ ..++|+-++|.
T Consensus 53 ~iiv~GGDGTv~~v~~~l~~~~~~lgiiP~ 82 (287)
T PRK13057 53 LVIVGGGDGTLNAAAPALVETGLPLGILPL 82 (287)
T ss_pred EEEEECchHHHHHHHHHHhcCCCcEEEECC
Confidence 399999999998884 35689999996
No 195
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.61 E-value=55 Score=28.31 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhhc---------CCCeEEeeccChh---hhcCCCCccceeecCC
Q 036598 14 SQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERVK---------DRGLIIKGWAPQV---LILNHPAVGGFMTHCG 80 (212)
Q Consensus 14 ~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~~---------~~~~~~~~~~p~~---~il~~~~~~~~v~hgG 80 (212)
..+...++.+++.+.+++..+.... .+.+.+.+..... .-.+...+|+||. .+|.-+++ -+-+ |
T Consensus 189 pa~~s~ieq~r~a~~p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~--n~VR-G 265 (370)
T COG4394 189 PALPSWIEQLRKADKPILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDF--NLVR-G 265 (370)
T ss_pred cchHHHHHHHHhcCCCEEEEcccchHHHHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhccc--ceee-c
Confidence 3456677778888888887776654 2222222211111 1224456899985 47766776 3333 5
Q ss_pred hhhHHHHHHcCCCee
Q 036598 81 WNSVLESVSSGVPMI 95 (212)
Q Consensus 81 ~~sv~eal~~GvP~i 95 (212)
--|+.-|..+|+|.+
T Consensus 266 EDSFVRAq~agkPfl 280 (370)
T COG4394 266 EDSFVRAQLAGKPFL 280 (370)
T ss_pred chHHHHHHHcCCCcE
Confidence 679999999999988
No 196
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=36.35 E-value=86 Score=24.11 Aligned_cols=31 Identities=16% Similarity=0.476 Sum_probs=19.7
Q ss_pred CCCCccceeecCChhh--HHHHH-HcCCCeeccCcc
Q 036598 68 NHPAVGGFMTHCGWNS--VLESV-SSGVPMITWPLF 100 (212)
Q Consensus 68 ~~~~~~~~v~hgG~~s--v~eal-~~GvP~i~iP~~ 100 (212)
.+|++ +|..++.+. +.+.+ ..|+|++.++..
T Consensus 68 l~PDl--ii~~~~~~~~~~~~~l~~~gIpvv~i~~~ 101 (186)
T cd01141 68 LKPDL--VILYGGFQAQTILDKLEQLGIPVLYVNEY 101 (186)
T ss_pred cCCCE--EEEecCCCchhHHHHHHHcCCCEEEeCCC
Confidence 47887 666554432 44443 678899888753
No 197
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=36.13 E-value=2.2e+02 Score=26.32 Aligned_cols=103 Identities=18% Similarity=0.136 Sum_probs=60.2
Q ss_pred hhcCCCCccce-eecCChhhH-HHHHHcCCC----eeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhcccc
Q 036598 65 LILNHPAVGGF-MTHCGWNSV-LESVSSGVP----MITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLV 138 (212)
Q Consensus 65 ~il~~~~~~~~-v~hgG~~sv-~eal~~GvP----~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~ 138 (212)
.++..+++.++ =.+-|+|.+ .|.+++..| ++++ .++.=|. +.++-++.+++ .
T Consensus 347 alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLIL----SefAGaA---~~L~~AllVNP---------------~ 404 (474)
T PRK10117 347 KIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVL----SQFAGAA---NELTSALIVNP---------------Y 404 (474)
T ss_pred HHHHhccEEEecccccccccccchheeeecCCCCccEEE----ecccchH---HHhCCCeEECC---------------C
Confidence 34556666332 235677754 476666543 2222 2222222 33566777765 6
Q ss_pred CHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 139 RRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 139 ~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
+.+++.++|.+.| +- -.++-++|.+++.+.++ ..+....+..++++|....
T Consensus 405 d~~~~A~Ai~~AL-~M--p~~Er~~R~~~l~~~v~-----~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 405 DRDEVAAALDRAL-TM--PLAERISRHAEMLDVIV-----KNDINHWQECFISDLKQIV 455 (474)
T ss_pred CHHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHhh-----hCCHHHHHHHHHHHHHHhh
Confidence 7889999999998 53 12344455555555544 4456667888998887664
No 198
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.86 E-value=82 Score=26.32 Aligned_cols=27 Identities=19% Similarity=0.366 Sum_probs=20.8
Q ss_pred ccceeecCChhhHHHHHH-cCCCeeccC
Q 036598 72 VGGFMTHCGWNSVLESVS-SGVPMITWP 98 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~-~GvP~i~iP 98 (212)
+.++|+=||-||++.++. .++|++.+-
T Consensus 42 ~d~vi~iGGDGT~L~a~~~~~~Pilgin 69 (256)
T PRK14075 42 ADLIIVVGGDGTVLKAAKKVGTPLVGFK 69 (256)
T ss_pred CCEEEEECCcHHHHHHHHHcCCCEEEEe
Confidence 344999999999999876 467776663
No 199
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=35.19 E-value=28 Score=26.93 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=24.9
Q ss_pred ChhhhcCCCCccceeecCChhhHHH---HHHcCCCeeccCc
Q 036598 62 PQVLILNHPAVGGFMTHCGWNSVLE---SVSSGVPMITWPL 99 (212)
Q Consensus 62 p~~~il~~~~~~~~v~hgG~~sv~e---al~~GvP~i~iP~ 99 (212)
+...++...+..+++--||.||+.| ++.+++|++++|.
T Consensus 83 ~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 3444443333334566788887655 5889999999875
No 200
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=34.15 E-value=85 Score=26.91 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=29.0
Q ss_pred EeeccChhhhcCCCCccceeecCChhhHHHHHH--cCCCeeccCccc
Q 036598 57 IKGWAPQVLILNHPAVGGFMTHCGWNSVLESVS--SGVPMITWPLFA 101 (212)
Q Consensus 57 ~~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~--~GvP~i~iP~~~ 101 (212)
+.++++...+-.||+. ||=..-..+++-+++ .|.+.+.-|...
T Consensus 82 lL~~lD~~~i~~~PK~--fiGySDiTaL~~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 82 LLPYLDYELIKKNPKI--FIGYSDITALHLAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred hhhhcCHHHHhhCCCE--EEeccHHHHHHHHHHHhcCCeEEECcccc
Confidence 3445555555667766 888887777777774 378777777643
No 201
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=33.65 E-value=1.2e+02 Score=22.46 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=23.2
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKS 36 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~ 36 (212)
|+|++||-.....+.+.++++.+. .+.++++....
T Consensus 54 vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 54 VVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred EEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 467778777766777777777763 35666665443
No 202
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.26 E-value=94 Score=26.22 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=18.9
Q ss_pred cceeecCChhhHHHHHHc-----CCCeecc
Q 036598 73 GGFMTHCGWNSVLESVSS-----GVPMITW 97 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~-----GvP~i~i 97 (212)
.++|+=||-||++.++.. .+|++.+
T Consensus 41 D~vi~lGGDGT~L~a~~~~~~~~~~pilgI 70 (264)
T PRK03501 41 NIIVSIGGDGTFLQAVRKTGFREDCLYAGI 70 (264)
T ss_pred cEEEEECCcHHHHHHHHHhcccCCCeEEeE
Confidence 349999999999999864 4555554
No 203
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=32.05 E-value=60 Score=24.96 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=42.1
Q ss_pred HHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccCh-h---------hhcCCCCccceeecCCh-----
Q 036598 17 LEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQ-V---------LILNHPAVGGFMTHCGW----- 81 (212)
Q Consensus 17 ~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~-~---------~il~~~~~~~~v~hgG~----- 81 (212)
..+++.|.+.++..++.++......|-+.+.. .+++.+..--.. . .+-..+.+ +++|.|.
T Consensus 5 ~~l~~~L~~~Gv~~vfgvpG~~~~~l~~al~~---~~~i~~i~~~~E~~A~~~A~g~ar~~g~~~v--~~~~~GpG~~n~ 79 (172)
T PF02776_consen 5 EALAEALKANGVTHVFGVPGSGNLPLLDALEK---SPGIRFIPVRHEQGAAFMADGYARATGRPGV--VIVTSGPGATNA 79 (172)
T ss_dssp HHHHHHHHHTT-SEEEEE--GGGHHHHHHHHH---TTTSEEEE-SSHHHHHHHHHHHHHHHSSEEE--EEEETTHHHHTT
T ss_pred HHHHHHHHHCCCeEEEEEeChhHhHHHHHhhh---hcceeeecccCcchhHHHHHHHHHhhccceE--EEeecccchHHH
Confidence 34678888899998888876541111122211 114443332111 1 11123444 8888873
Q ss_pred -hhHHHHHHcCCCeeccCc
Q 036598 82 -NSVLESVSSGVPMITWPL 99 (212)
Q Consensus 82 -~sv~eal~~GvP~i~iP~ 99 (212)
+++.++...++|+|++.-
T Consensus 80 ~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 80 LTGLANAYADRIPVLVITG 98 (172)
T ss_dssp HHHHHHHHHTT-EEEEEEE
T ss_pred HHHHhhcccceeeEEEEec
Confidence 588899999999998864
No 204
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=31.88 E-value=1.7e+02 Score=26.15 Aligned_cols=63 Identities=17% Similarity=0.219 Sum_probs=41.1
Q ss_pred HHHHHHHHhhCCceEEEEEeCCc-----ccccchhHHHhhcCC-CeEEeeccChhhhcCCCCccceeecCChhhHHHHHH
Q 036598 16 LLEIALGLESSNICFIWVIKSDA-----FLLLDKDFEERVKDR-GLIIKGWAPQVLILNHPAVGGFMTHCGWNSVLESVS 89 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~-----~~~lp~~~~~~~~~~-~~~~~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~ 89 (212)
-..|..+|+-+..+||++..+.. ..++|+++.+..+.. ++..+.|.+ + ||+++.--++.+++.
T Consensus 255 ~atm~~aL~vS~APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~--------~---~isc~~~A~v~~v~~ 323 (419)
T KOG4127|consen 255 DATMRDALEVSRAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYP--------G---FISCSDRATVSDVAD 323 (419)
T ss_pred HHHHHHHHHhhcCceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeec--------c---cccCCCcccHHHHHH
Confidence 45567788878889999877643 357899988776644 444445432 1 677666566777643
No 205
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.83 E-value=1e+02 Score=26.08 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=21.2
Q ss_pred CCCccceeecCChhhHHHHHH----cCCCeeccC
Q 036598 69 HPAVGGFMTHCGWNSVLESVS----SGVPMITWP 98 (212)
Q Consensus 69 ~~~~~~~v~hgG~~sv~eal~----~GvP~i~iP 98 (212)
.+++ +|+=||-||++.++. .++|++.+-
T Consensus 42 ~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn 73 (272)
T PRK02231 42 RAQL--AIVIGGDGNMLGRARVLAKYDIPLIGIN 73 (272)
T ss_pred CCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe
Confidence 4455 999999999998754 367877763
No 206
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=31.76 E-value=1.6e+02 Score=27.40 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=46.8
Q ss_pred HHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC-hhh-------hcCCCCccceeecCCh-----
Q 036598 15 QLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP-QVL-------ILNHPAVGGFMTHCGW----- 81 (212)
Q Consensus 15 ~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-~~~-------il~~~~~~~~v~hgG~----- 81 (212)
....+++.|.+.|+..++.++......+-+.+. ..+++.+..... +.. -...-...+++.|.|-
T Consensus 11 ~a~~l~~~L~~~GV~~vFgvpG~~~~~l~~~l~---~~~~i~~v~~~hE~~A~~aAdgyar~tg~~~v~~vt~GpG~~N~ 87 (568)
T PRK07449 11 WAAVILEELTRLGVRHVVIAPGSRSTPLTLAAA---EHPRLRLHTHFDERSAGFLALGLAKASKRPVAVIVTSGTAVANL 87 (568)
T ss_pred HHHHHHHHHHHcCCCEEEECCCCccHHHHHHHH---hCCCcEEEeecCcccHHHHHHHHHHhhCCCEEEEECCccHHHhh
Confidence 345577889999999999888764111112221 223343322111 111 0111123337777774
Q ss_pred -hhHHHHHHcCCCeeccC
Q 036598 82 -NSVLESVSSGVPMITWP 98 (212)
Q Consensus 82 -~sv~eal~~GvP~i~iP 98 (212)
+.+.+|-..++|+|+|.
T Consensus 88 l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 88 YPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred hHHHHHHhhcCCcEEEEE
Confidence 58999999999999994
No 207
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=31.75 E-value=3.8e+02 Score=24.04 Aligned_cols=88 Identities=14% Similarity=0.274 Sum_probs=57.6
Q ss_pred eeccC---hhhhcCCCCccceeecCChh-----hHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCcccc
Q 036598 58 KGWAP---QVLILNHPAVGGFMTHCGWN-----SVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWG 129 (212)
Q Consensus 58 ~~~~p---~~~il~~~~~~~~v~hgG~~-----sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 129 (212)
..|+. ...+|+.+++++.+|-...| -+....-+|+|++.+-+ ..-...+ ++-.-|...
T Consensus 324 tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f----kcl~ELV-kh~eNGlvF--------- 389 (444)
T KOG2941|consen 324 TPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF----KCLDELV-KHGENGLVF--------- 389 (444)
T ss_pred ecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc----hhHHHHH-hcCCCceEe---------
Confidence 34653 45688899998877765544 46666777888887755 2223344 542346666
Q ss_pred ccchhccccCHHHHHHHHHHHhhc----CccchHHHHHHHHHH
Q 036598 130 EEEKIGVLVRRDRVEKVVYQFMIN----GGEEVEGMRKRARKL 168 (212)
Q Consensus 130 ~~~~~~~~~~~~~l~~ai~~vl~~----~~~~~~~~~~~a~~l 168 (212)
-+++++.+.+..++ . |.++..++++|+++-
T Consensus 390 --------~Ds~eLa~ql~~lf-~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 390 --------EDSEELAEQLQMLF-KNFPDNADELNQLKKNLREE 423 (444)
T ss_pred --------ccHHHHHHHHHHHH-hcCCCCHHHHHHHHHhhHHH
Confidence 46678888888887 6 556677777777664
No 208
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=31.22 E-value=1.2e+02 Score=25.48 Aligned_cols=26 Identities=23% Similarity=0.428 Sum_probs=19.2
Q ss_pred ceeecCChhhHHHHHHc-----CCCee-ccCc
Q 036598 74 GFMTHCGWNSVLESVSS-----GVPMI-TWPL 99 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~-----GvP~i-~iP~ 99 (212)
.+|.-||-||+.|++.. ..|.+ ++|.
T Consensus 60 ~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 60 TVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred EEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 49999999999996532 34555 4886
No 209
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=31.12 E-value=96 Score=25.14 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=20.7
Q ss_pred CCCCccceeecCChhh--HHHHH-H-cCCCeeccCcc
Q 036598 68 NHPAVGGFMTHCGWNS--VLESV-S-SGVPMITWPLF 100 (212)
Q Consensus 68 ~~~~~~~~v~hgG~~s--v~eal-~-~GvP~i~iP~~ 100 (212)
.+|++ +|...+... ..+.+ . .|+|++.++..
T Consensus 73 l~PDL--Ii~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 73 LKPDV--VIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred cCCCE--EEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 36887 777655443 45544 3 88999988864
No 210
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=30.89 E-value=70 Score=23.58 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=25.9
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhh--CCceEEEEEeC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLES--SNICFIWVIKS 36 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~--~~~~viw~~~~ 36 (212)
|+++|||......+.+..+.+.+.+ ++..|-|.+-+
T Consensus 4 llv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~afts 41 (127)
T cd03412 4 LLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFTS 41 (127)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEecH
Confidence 5799999988555567777777753 46677777654
No 211
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=30.52 E-value=83 Score=29.58 Aligned_cols=52 Identities=15% Similarity=0.326 Sum_probs=35.7
Q ss_pred ccceeecCChhhHHHHHH----cCCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 72 VGGFMTHCGWNSVLESVS----SGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~----~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
+.++|+-||-||++.+.. .++|++.+-.. .+|... + ++.+++.+++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGFL~---~-------------~~~~~~~~~l 398 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGFLT---E-------------FSKEEIFKAI 398 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCcCc---c-------------cCHHHHHHHH
Confidence 456999999999999866 36787777431 123322 1 5667788888
Q ss_pred HHHhhcC
Q 036598 148 YQFMING 154 (212)
Q Consensus 148 ~~vl~~~ 154 (212)
.+++ ++
T Consensus 399 ~~~~-~g 404 (569)
T PRK14076 399 DSII-SG 404 (569)
T ss_pred HHHH-cC
Confidence 8887 63
No 212
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=30.35 E-value=1.1e+02 Score=28.44 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=35.4
Q ss_pred ccceeecCChhhHHHHHHc----CCCeeccCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHH
Q 036598 72 VGGFMTHCGWNSVLESVSS----GVPMITWPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVV 147 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~~----GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai 147 (212)
++++|+=||-||++.+... ++|++.+-. - .+|..-. ++.+++..+|
T Consensus 263 ~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~--------G------~LGFLt~----------------i~~~e~~~~L 312 (508)
T PLN02935 263 VDLVITLGGDGTVLWAASMFKGPVPPVVPFSM--------G------SLGFMTP----------------FHSEQYRDCL 312 (508)
T ss_pred CCEEEEECCcHHHHHHHHHhccCCCcEEEEeC--------C------Ccceecc----------------cCHHHHHHHH
Confidence 4559999999999999663 456665521 0 1444321 6778888889
Q ss_pred HHHhhcC
Q 036598 148 YQFMING 154 (212)
Q Consensus 148 ~~vl~~~ 154 (212)
.+++ ++
T Consensus 313 e~il-~G 318 (508)
T PLN02935 313 DAIL-KG 318 (508)
T ss_pred HHHH-cC
Confidence 8888 64
No 213
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=29.94 E-value=1e+02 Score=27.45 Aligned_cols=84 Identities=13% Similarity=0.134 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCc-cc----ccchh---HHHhhcCCC--eEEeeccChh---hhcCCCCccceee
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDA-FL----LLDKD---FEERVKDRG--LIIKGWAPQV---LILNHPAVGGFMT 77 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~----~lp~~---~~~~~~~~~--~~~~~~~p~~---~il~~~~~~~~v~ 77 (212)
....-+..+++++.+.+.++...+.... .. .++.. .+......+ +.+.+|+||. .+|-.+++ -+-
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--NfV 269 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDF--NFV 269 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccccccCCeEEEECCCCCHHHHHHHHHhCcc--ceE
Confidence 4455588899999888888777776654 11 11100 011112223 4467899985 47877776 333
Q ss_pred cCChhhHHHHHHcCCCeecc
Q 036598 78 HCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 78 hgG~~sv~eal~~GvP~i~i 97 (212)
+ |-=|+.-|..+|+|+|=-
T Consensus 270 R-GEDSfVRAqwAgkPFvWh 288 (374)
T PF10093_consen 270 R-GEDSFVRAQWAGKPFVWH 288 (374)
T ss_pred e-cchHHHHHHHhCCCceEe
Confidence 3 566999999999999943
No 214
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=29.78 E-value=2.6e+02 Score=21.50 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=44.1
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG 80 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG 80 (212)
|.|-+||... ...+.++...|+..++.+-..+-+-+ ..|+.+.+. +.. +.+...+.||.-+|
T Consensus 3 V~Ii~gs~SD--~~~~~~a~~~L~~~gi~~~~~V~saH--R~p~~l~~~-----------~~~---~~~~~~~viIa~AG 64 (150)
T PF00731_consen 3 VAIIMGSTSD--LPIAEEAAKTLEEFGIPYEVRVASAH--RTPERLLEF-----------VKE---YEARGADVIIAVAG 64 (150)
T ss_dssp EEEEESSGGG--HHHHHHHHHHHHHTT-EEEEEE--TT--TSHHHHHHH-----------HHH---TTTTTESEEEEEEE
T ss_pred EEEEeCCHHH--HHHHHHHHHHHHHcCCCEEEEEEecc--CCHHHHHHH-----------HHH---hccCCCEEEEEECC
Confidence 3456677665 56677777888888876665555433 123332211 111 11112233777777
Q ss_pred h----hhHHHHHHcCCCeeccCcccchh
Q 036598 81 W----NSVLESVSSGVPMITWPLFAEQF 104 (212)
Q Consensus 81 ~----~sv~eal~~GvP~i~iP~~~DQ~ 104 (212)
. .++.-++. -.|+|.+|....+.
T Consensus 65 ~~a~Lpgvva~~t-~~PVIgvP~~~~~~ 91 (150)
T PF00731_consen 65 MSAALPGVVASLT-TLPVIGVPVSSGYL 91 (150)
T ss_dssp SS--HHHHHHHHS-SS-EEEEEE-STTT
T ss_pred Ccccchhhheecc-CCCEEEeecCcccc
Confidence 4 34444443 79999999876543
No 215
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=29.62 E-value=3.5e+02 Score=22.98 Aligned_cols=67 Identities=15% Similarity=0.050 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCC--hhhHHHH
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCG--WNSVLES 87 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG--~~sv~ea 87 (212)
.+...+..+.+++++.|..|++-+|... ...++. .......=..-.-..|++++++.|+| ..=..++
T Consensus 141 ~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~----------~~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 141 PDDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEK----------GHSDPLYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred CCChHHHHHHHHHHHcCCCEEEEeCCCCCCccccc----------CCCCchHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 3444566777888888888887665432 000000 00000011122345789999999999 5444454
No 216
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=29.62 E-value=2.3e+02 Score=26.02 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=52.5
Q ss_pred hhcCCCCccce-eecCChhh-HHHHHHcCCC---eeccCcccchhhHHHHHHHHhc-ceeEeeccCCccccccchhcccc
Q 036598 65 LILNHPAVGGF-MTHCGWNS-VLESVSSGVP---MITWPLFAEQFYNENFVLTHWK-IGVGVGVESGLAWGEEEKIGVLV 138 (212)
Q Consensus 65 ~il~~~~~~~~-v~hgG~~s-v~eal~~GvP---~i~iP~~~DQ~~na~~v~~~~g-~G~~~~~~~~~~~~~~~~~~~~~ 138 (212)
.++..+++.++ -.+.|+|. ..|.+++..+ ++++ .++.-|. +.++ .++.+++ .
T Consensus 368 aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiL----SefaGaa---~~L~~~al~VNP---------------~ 425 (474)
T PF00982_consen 368 ALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLIL----SEFAGAA---EQLSEAALLVNP---------------W 425 (474)
T ss_dssp HHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEE----ETTBGGG---GT-TTS-EEE-T---------------T
T ss_pred HHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEe----eccCCHH---HHcCCccEEECC---------------C
Confidence 45566776333 34678874 4677777665 2232 2333332 3346 4477765 6
Q ss_pred CHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036598 139 RRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLL 194 (212)
Q Consensus 139 ~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~ 194 (212)
+.++++++|.+.| +=+ .++-+++.+++.+.+. ..+....+..++++|.
T Consensus 426 d~~~~A~ai~~AL-~M~--~~Er~~r~~~~~~~v~-----~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 426 DIEEVADAIHEAL-TMP--PEERKERHARLREYVR-----EHDVQWWAESFLRDLK 473 (474)
T ss_dssp -HHHHHHHHHHHH-T----HHHHHHHHHHHHHHHH-----HT-HHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHH-cCC--HHHHHHHHHHHHHHhH-----hCCHHHHHHHHHHHhh
Confidence 7889999999998 521 1344455555555554 3445566778888775
No 217
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=29.41 E-value=33 Score=25.60 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=27.6
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHh-----hCCceEEEEEeCCc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLE-----SSNICFIWVIKSDA 38 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~-----~~~~~viw~~~~~~ 38 (212)
|+|+.||...+....+..++.... ...+.++|.+....
T Consensus 5 vlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~~ 47 (156)
T PF08030_consen 5 VLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDAD 47 (156)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-TT
T ss_pred EEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCchh
Confidence 578999998877777777776665 34579999998765
No 218
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=29.04 E-value=1.3e+02 Score=27.95 Aligned_cols=82 Identities=13% Similarity=0.076 Sum_probs=44.7
Q ss_pred HHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-Chhh-------hcCCCCccceeecCCh------h
Q 036598 17 LEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-PQVL-------ILNHPAVGGFMTHCGW------N 82 (212)
Q Consensus 17 ~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-p~~~-------il~~~~~~~~v~hgG~------~ 82 (212)
..+++.|.+.|+..++-++......|-+.+......+++.+..-- .+.. -...-...++++|.|- +
T Consensus 6 ~~l~~~L~~~GV~~vFg~pG~~~~~l~dal~~~~~~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv~~~t~GpG~~N~l~ 85 (572)
T PRK06456 6 RILVDSLKREGVKVIFGIPGLSNMQIYDAFVEDLANGELRHVLMRHEQAAAHAADGYARASGVPGVCTATSGPGTTNLVT 85 (572)
T ss_pred HHHHHHHHHcCCCEEEeCCCcchHHHHHHHHhhccCCCCeEEEeCcHHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHH
Confidence 446788888899999887765411111222211011223322211 1111 0011223347778773 5
Q ss_pred hHHHHHHcCCCeeccC
Q 036598 83 SVLESVSSGVPMITWP 98 (212)
Q Consensus 83 sv~eal~~GvP~i~iP 98 (212)
.+.+|...++|+|++.
T Consensus 86 gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 86 GLITAYWDSSPVIAIT 101 (572)
T ss_pred HHHHHHhhCCCEEEEe
Confidence 7899999999999985
No 219
>PRK06270 homoserine dehydrogenase; Provisional
Probab=28.96 E-value=3.9e+02 Score=23.21 Aligned_cols=58 Identities=9% Similarity=0.066 Sum_probs=34.4
Q ss_pred ChhhhcCCCCccceee------cCC---hhhHHHHHHcCCCeec---cCcccchhhHHHHHHHHhcceeEe
Q 036598 62 PQVLILNHPAVGGFMT------HCG---WNSVLESVSSGVPMIT---WPLFAEQFYNENFVLTHWKIGVGV 120 (212)
Q Consensus 62 p~~~il~~~~~~~~v~------hgG---~~sv~eal~~GvP~i~---iP~~~DQ~~na~~v~~~~g~G~~~ 120 (212)
+...++..++..++|- |++ ..-+.+++.+|+++|+ -|+...-. --..++++.|+.+..
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~-eL~~~A~~~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYK-ELKELAKKNGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHH-HHHHHHHHcCCEEEE
Confidence 3455676666665655 443 3456899999999999 47643222 223333555666554
No 220
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.61 E-value=43 Score=28.39 Aligned_cols=28 Identities=14% Similarity=0.243 Sum_probs=21.7
Q ss_pred ccceeecCChhhHHHHHH---cCCCeeccCc
Q 036598 72 VGGFMTHCGWNSVLESVS---SGVPMITWPL 99 (212)
Q Consensus 72 ~~~~v~hgG~~sv~eal~---~GvP~i~iP~ 99 (212)
..++|.-||-||+++++. .++|++.+|.
T Consensus 58 ~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 58 VDFIIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred CCEEEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 345999999999998873 3567777765
No 221
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=28.27 E-value=4.9e+02 Score=24.33 Aligned_cols=77 Identities=18% Similarity=0.165 Sum_probs=43.4
Q ss_pred HHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC--------hhhhcCCCCccceeecCCh------hh
Q 036598 18 EIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP--------QVLILNHPAVGGFMTHCGW------NS 83 (212)
Q Consensus 18 ~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p--------~~~il~~~~~~~~v~hgG~------~s 83 (212)
.+++.|.+.|+..++.++......+-+.+. ..++.+..--. ...-...-...++++|.|- +.
T Consensus 6 ~l~~~L~~~Gv~~vFg~pG~~~~~l~~al~----~~~i~~i~~~hE~~A~~~Adgyar~tg~~gv~~~t~GPG~~n~l~~ 81 (586)
T PRK06276 6 AIIKALEAEGVKIIFGYPGGALLPFYDALY----DSDLIHILTRHEQAAAHAADGYARASGKVGVCVATSGPGATNLVTG 81 (586)
T ss_pred HHHHHHHHcCCCEEEECCCcchHHHHHHHH----hCCCcEEEeccHHHHHHHHHHHHHHhCCCEEEEECCCccHHHHHHH
Confidence 466778888999998877654111112221 12332211111 1000111223348888773 68
Q ss_pred HHHHHHcCCCeeccC
Q 036598 84 VLESVSSGVPMITWP 98 (212)
Q Consensus 84 v~eal~~GvP~i~iP 98 (212)
+.+|...++|+|++.
T Consensus 82 i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 82 IATAYADSSPVIALT 96 (586)
T ss_pred HHHHHhcCCCEEEEe
Confidence 999999999999884
No 222
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=28.27 E-value=50 Score=27.61 Aligned_cols=27 Identities=15% Similarity=0.169 Sum_probs=20.7
Q ss_pred cceeecCChhhHHHHHHc----CCCeeccCc
Q 036598 73 GGFMTHCGWNSVLESVSS----GVPMITWPL 99 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~----GvP~i~iP~ 99 (212)
+++|+-||-||++.++.. ++|++.+-.
T Consensus 27 Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 27 DVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 349999999999988553 678777643
No 223
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=27.43 E-value=3.4e+02 Score=27.40 Aligned_cols=102 Identities=16% Similarity=0.048 Sum_probs=58.4
Q ss_pred hhcCCCCccce-eecCChh-hHHHHHHcCC---CeeccCcccchhhHHHHHHHHhc-ceeEeeccCCccccccchhcccc
Q 036598 65 LILNHPAVGGF-MTHCGWN-SVLESVSSGV---PMITWPLFAEQFYNENFVLTHWK-IGVGVGVESGLAWGEEEKIGVLV 138 (212)
Q Consensus 65 ~il~~~~~~~~-v~hgG~~-sv~eal~~Gv---P~i~iP~~~DQ~~na~~v~~~~g-~G~~~~~~~~~~~~~~~~~~~~~ 138 (212)
.++..+++.++ =.+-|+| ...|+++++. .+++++-++ -+. +.+| -|+.+++ .
T Consensus 455 AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfa----Gaa---~~L~~~AllVNP---------------~ 512 (934)
T PLN03064 455 ALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFA----GAA---QSLGAGAILVNP---------------W 512 (934)
T ss_pred HHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCC----chH---HHhCCceEEECC---------------C
Confidence 45566666222 1245776 5569999855 222333322 111 2234 4677765 6
Q ss_pred CHHHHHHHHHHHhhc-CccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 036598 139 RRDRVEKVVYQFMIN-GGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQK 197 (212)
Q Consensus 139 ~~~~l~~ai~~vl~~-~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~ 197 (212)
+.+++.++|.+.| + +. ++-+++.+++.+.+. ..+....+..|+++|....
T Consensus 513 D~~~vA~AI~~AL-~M~~---~Er~~r~~~~~~~V~-----~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 513 NITEVAASIAQAL-NMPE---EEREKRHRHNFMHVT-----THTAQEWAETFVSELNDTV 563 (934)
T ss_pred CHHHHHHHHHHHH-hCCH---HHHHHHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHH
Confidence 7789999999988 5 31 233444444444443 4556667778888886653
No 224
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=27.15 E-value=1.9e+02 Score=26.97 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=44.4
Q ss_pred HHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeecc-Chhh-------hcCCCCccceeecCCh------h
Q 036598 17 LEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWA-PQVL-------ILNHPAVGGFMTHCGW------N 82 (212)
Q Consensus 17 ~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~-p~~~-------il~~~~~~~~v~hgG~------~ 82 (212)
..+++.|.+.|+..++.++....-.+-+.+ ...+++.+..-- .+.. -...-..+++++|.|- +
T Consensus 7 ~~l~~~L~~~Gv~~vFgipG~~~~~l~~~l---~~~~~i~~v~~rhE~~A~~~Adgyar~tg~~gv~~~t~GpG~~n~~~ 83 (563)
T PRK08527 7 QMVCEALKEEGVKVVFGYPGGAILNIYDEI---YKQNYFKHILTRHEQAAVHAADGYARASGKVGVAIVTSGPGFTNAVT 83 (563)
T ss_pred HHHHHHHHHcCCCEEEECCCcchHHHHHHH---hccCCCeEEEeccHHHHHHHHHHHHhhhCCCEEEEECCCCcHHHHHH
Confidence 446788888899988887765411111111 112233322211 0110 0111234448888884 5
Q ss_pred hHHHHHHcCCCeeccC
Q 036598 83 SVLESVSSGVPMITWP 98 (212)
Q Consensus 83 sv~eal~~GvP~i~iP 98 (212)
.+.+|...++|+|++.
T Consensus 84 gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 84 GLATAYMDSIPLVLIS 99 (563)
T ss_pred HHHHHhhcCCCEEEEe
Confidence 8999999999999884
No 225
>PLN02496 probable phosphopantothenoylcysteine decarboxylase
Probab=26.91 E-value=2.4e+02 Score=23.02 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=48.0
Q ss_pred hhhhcCCCCccceeecCChhhHH---------------HHHHcCCCeeccCccc----chh---hHHHHHHHHhcceeEe
Q 036598 63 QVLILNHPAVGGFMTHCGWNSVL---------------ESVSSGVPMITWPLFA----EQF---YNENFVLTHWKIGVGV 120 (212)
Q Consensus 63 ~~~il~~~~~~~~v~hgG~~sv~---------------eal~~GvP~i~iP~~~----DQ~---~na~~v~~~~g~G~~~ 120 (212)
+.++...+++ ++|.-+-+||+. .+.-+++|+++.|-.. +++ .|-..+ +..|+=+.-
T Consensus 90 HI~La~wAD~-~vVaPaTaNtlaKiA~GiaDnlltt~l~a~~~~~Pv~iaPaMN~~Mw~~Pat~~nl~~L-~~~G~~vi~ 167 (209)
T PLN02496 90 HIELRRWADV-MVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPLFVAPAMNTFMWNNPFTERHLMSI-DELGISLIP 167 (209)
T ss_pred hhHhhhhhCE-EEEEeCCHHHHHHHHcccCCcHHHHHHHHcCCCCCEEEEeCCCHHHHhCHHHHHHHHHH-HHCCCEEEC
Confidence 4444444554 456666655443 3333589999999743 332 344556 444554443
Q ss_pred eccCCccccccchhccccCHHHHHHHHHHHh
Q 036598 121 GVESGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
.....+.|.+.+. +.-..+++|...+.+.+
T Consensus 168 P~~g~lAcg~~G~-Grm~ep~~I~~~i~~~l 197 (209)
T PLN02496 168 PVTKRLACGDYGN-GAMAEPSLIYSTVRLFL 197 (209)
T ss_pred CCcCcccCCCcCC-CCCCCHHHHHHHHHHHH
Confidence 3333345555554 33457778877777776
No 226
>smart00096 UTG Uteroglobin.
Probab=26.84 E-value=2e+02 Score=19.15 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036598 138 VRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQ 196 (212)
Q Consensus 138 ~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~ 196 (212)
-+.+.....+.+.- .| +.+.+++.++++-.-. + .-..+.++..+++.|..+
T Consensus 16 gt~~~Y~~~l~~y~-~~----~~~~ea~~~lK~cvD~-L--~~~~k~~i~~ll~kI~~s 66 (69)
T smart00096 16 GTPSSYEASLKQFK-PD----PDMLEAGRQLKKLVDT-L--PQETRENILKLTEKIYTS 66 (69)
T ss_pred CCHHHHHHHHHhcC-CC----HHHHHHHHHHHHHHhc-C--CHHHHHHHHHHHHHHHcC
Confidence 46677888898887 77 8888888888876653 2 222346788888877543
No 227
>PRK13337 putative lipid kinase; Reviewed
Probab=26.08 E-value=2.3e+02 Score=24.02 Aligned_cols=27 Identities=15% Similarity=0.102 Sum_probs=21.2
Q ss_pred cceeecCChhhHHHHHH--c----CCCeeccCc
Q 036598 73 GGFMTHCGWNSVLESVS--S----GVPMITWPL 99 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~--~----GvP~i~iP~ 99 (212)
+.+|..||-||+.|++. . ..|+-++|.
T Consensus 59 d~vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~ 91 (304)
T PRK13337 59 DLVIAAGGDGTLNEVVNGIAEKENRPKLGIIPV 91 (304)
T ss_pred CEEEEEcCCCHHHHHHHHHhhCCCCCcEEEECC
Confidence 34999999999999875 2 347778896
No 228
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=25.97 E-value=40 Score=27.49 Aligned_cols=22 Identities=9% Similarity=-0.099 Sum_probs=18.3
Q ss_pred cceeecCChhhHHHHHHcCCCe
Q 036598 73 GGFMTHCGWNSVLESVSSGVPM 94 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~GvP~ 94 (212)
-++|+|||...+.-+...|.|.
T Consensus 177 vlvVsHg~vir~ll~~~~~~~~ 198 (228)
T PRK14116 177 VIIAAHGNSLRALTKYIENISD 198 (228)
T ss_pred EEEEcChHHHHHHHHHHhCCCH
Confidence 3699999998888888888774
No 229
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=25.92 E-value=36 Score=30.12 Aligned_cols=67 Identities=10% Similarity=0.105 Sum_probs=47.5
Q ss_pred HHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036598 112 THWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLID 191 (212)
Q Consensus 112 ~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~ 191 (212)
++.|+-.++.. +.+.+|..+|..++ +.+.+.-.++-..-.+++.+.|+.. +.++|+
T Consensus 209 ~~y~~P~VVaG---------------FEp~DiL~ai~~lv-------~q~~~g~~~v~N~Y~r~V~~eGN~~--A~~~i~ 264 (364)
T PRK15062 209 EEYGIPVVVAG---------------FEPLDILQSILMLV-------RQLEEGRAEVENQYTRVVKEEGNLK--AQELIA 264 (364)
T ss_pred HHcCCCeEEec---------------cCHHHHHHHHHHHH-------HHHHCCCceEEEccceeeCcccCHH--HHHHHH
Confidence 55688877854 88888888888887 4555555555556666777788755 889999
Q ss_pred HHHhhhhhhhh
Q 036598 192 DLLNQKVERLS 202 (212)
Q Consensus 192 ~l~~~~~~~~~ 202 (212)
++....+..|+
T Consensus 265 ~vFe~~d~~WR 275 (364)
T PRK15062 265 EVFEVRDAFWR 275 (364)
T ss_pred HHcCcCCCccc
Confidence 98777655443
No 230
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=25.90 E-value=2.8e+02 Score=25.61 Aligned_cols=74 Identities=16% Similarity=0.234 Sum_probs=47.8
Q ss_pred hhcC-CCCccceeecCC---------h-----hhHHHHHHcCCCeeccCcccc-----hhhHHHHHHHHhcce-eEeecc
Q 036598 65 LILN-HPAVGGFMTHCG---------W-----NSVLESVSSGVPMITWPLFAE-----QFYNENFVLTHWKIG-VGVGVE 123 (212)
Q Consensus 65 ~il~-~~~~~~~v~hgG---------~-----~sv~eal~~GvP~i~iP~~~D-----Q~~na~~v~~~~g~G-~~~~~~ 123 (212)
.++. |++++++|+-.| + ..+.|.-..|+|.+++=-..| ...-+..+.++.++- +.+.-.
T Consensus 139 kVI~dhstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~~~et~~l~~~l~eky~vpvl~v~c~ 218 (492)
T TIGR02836 139 KVIQEHSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPYHPETEALRQELEEKYDVPVLAMDVE 218 (492)
T ss_pred HHHHhcCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCCCchhHHHHHHHHHHhCCceEEEEHH
Confidence 3555 999999999544 2 367777888999998743333 222233444544544 233332
Q ss_pred CCccccccchhccccCHHHHHHHHHHHh
Q 036598 124 SGLAWGEEEKIGVLVRRDRVEKVVYQFM 151 (212)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl 151 (212)
. ++.++|.+.++++|
T Consensus 219 ~-------------l~~~DI~~il~~vL 233 (492)
T TIGR02836 219 S-------------MRESDILSVLEEVL 233 (492)
T ss_pred H-------------cCHHHHHHHHHHHH
Confidence 2 88999999999987
No 231
>PF06825 HSBP1: Heat shock factor binding protein 1; InterPro: IPR009643 Heat shock factor binding protein 1 (HSBP1) appears to be a negative regulator of the heat shock response [].; PDB: 3CI9_A.
Probab=25.57 E-value=1.2e+02 Score=19.11 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036598 141 DRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLL 194 (212)
Q Consensus 141 ~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~ 194 (212)
.++...+..+| +.+..+-..++..+-..+.+=|+.-..+..-|.++.
T Consensus 2 ~elt~~v~~lL-------~qmq~kFq~mS~~I~~riDeM~~RIDdLE~si~dl~ 48 (54)
T PF06825_consen 2 QELTAFVQNLL-------QQMQDKFQTMSDQILGRIDEMSSRIDDLEKSIADLM 48 (54)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH----
T ss_pred hHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46777888888 577778777777777555554444444444444443
No 232
>PF01924 HypD: Hydrogenase formation hypA family; InterPro: IPR002780 HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes []. This protein has been found in Gram-negative and Gram-positive bacteria and Archaea. HypD contains many possible metal binding residues, which may bind to nickel. Transposon insertions into HypD resulted in Rhizobium leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas [].; GO: 0046872 metal ion binding; PDB: 2Z1D_A.
Probab=25.44 E-value=22 Score=31.27 Aligned_cols=110 Identities=12% Similarity=0.211 Sum_probs=60.4
Q ss_pred CCCeEEee---ccCh--hhhcCCC--CccceeecCChhhHHHHHHcCCCeeccCcccchhhHHHHHHHHhcceeEeeccC
Q 036598 52 DRGLIIKG---WAPQ--VLILNHP--AVGGFMTHCGWNSVLESVSSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGVES 124 (212)
Q Consensus 52 ~~~~~~~~---~~p~--~~il~~~--~~~~~v~hgG~~sv~eal~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~~~ 124 (212)
..|+.+.. .+|. ..+|..+ .++.||.-|=..++.-+ . .+.. ++++.++-.++..
T Consensus 154 ~~Nfsvl~~hk~~ppal~~ll~~~~~~idGfi~PGHVs~I~G~---------------~-~y~~-l~~~y~~P~vIaG-- 214 (355)
T PF01924_consen 154 IKNFSVLSSHKLTPPALEALLEDPELKIDGFICPGHVSTIIGS---------------E-PYEF-LAEEYGIPCVIAG-- 214 (355)
T ss_dssp -SSEEEEEEEE-CHHHHHHHHHTT----SEEEEEHHHHHHHCC---------------H-HHHH-HHHCC---EEEE---
T ss_pred CCCEEEEEeccccHHHHHHHHcCCCCCccEEEeCCeeeEEecc---------------h-hhHH-HHHHcCCCeEEcC--
Confidence 46666533 3443 3466655 56667877644433322 1 1222 2365677777754
Q ss_pred CccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhhh
Q 036598 125 GLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLIDDLLNQKVERLS 202 (212)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~~l~~~~~~~~~ 202 (212)
+.+.+|..+|..++ +.+.++-.++.....+++.+.|+.. +.++|+++.+..+..|+
T Consensus 215 -------------FEp~diL~ai~~lv-------~qi~~g~~~v~N~Y~r~V~~eGN~~--A~~~i~evFe~~d~~WR 270 (355)
T PF01924_consen 215 -------------FEPLDILQAIYMLV-------KQINEGEAEVENQYPRVVKPEGNPK--AQELINEVFEPCDAEWR 270 (355)
T ss_dssp -------------SSHHHHHHHHHHHH-------HHHHTT---EEES-TTT--TT--HH--HHHHHHHHEEEEEEEET
T ss_pred -------------CCHHHHHHHHHHHH-------HHHHCCCCeEEEecceeeCCccCHH--HHHHHHHHhCcCCCccc
Confidence 88999999998888 5666666666667777778888765 89999999877665443
No 233
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=24.83 E-value=3.8e+02 Score=23.15 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=26.3
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCC
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNICFIWVIKSD 37 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~ 37 (212)
+++++|+.+.. .-+..++++|.+.|+.|.+.....
T Consensus 4 l~~~~p~~GHv--~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 4 LITTIGSRGDV--QPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred EEEeCCCcchH--HHHHHHHHHHHHCCCeEEEeeCHh
Confidence 46788877763 335678889999999999887754
No 234
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=24.80 E-value=3.2e+02 Score=25.33 Aligned_cols=149 Identities=13% Similarity=0.072 Sum_probs=76.7
Q ss_pred HHHHHHHHHhhCCceEEEEEeCCcccccchhHHHh--hcCCCeEEeeccCh---hhhcCCCCccceee-----cCChhhH
Q 036598 15 QLLEIALGLESSNICFIWVIKSDAFLLLDKDFEER--VKDRGLIIKGWAPQ---VLILNHPAVGGFMT-----HCGWNSV 84 (212)
Q Consensus 15 ~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~--~~~~~~~~~~~~p~---~~il~~~~~~~~v~-----hgG~~sv 84 (212)
.+..++..+.+.+.+++. +|... ..+.+.+... ..+.++.+.-+.+. ..+++-+++ ++- -||. |=
T Consensus 311 l~~~~i~~~l~~~~~~vi-lG~gd-~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~--~lmPSrfEPcGL-~q 385 (487)
T COG0297 311 LLLEAIDELLEQGWQLVL-LGTGD-PELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADV--ILMPSRFEPCGL-TQ 385 (487)
T ss_pred HHHHHHHHHHHhCceEEE-EecCc-HHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCE--EEeCCcCcCCcH-HH
Confidence 344455555555666553 33332 2232333221 11234555555543 234444554 433 2454 56
Q ss_pred HHHHHcCCCeeccCcc--cchhhHHHH--HHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHH
Q 036598 85 LESVSSGVPMITWPLF--AEQFYNENF--VLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEG 160 (212)
Q Consensus 85 ~eal~~GvP~i~iP~~--~DQ~~na~~--v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 160 (212)
++++.+|.+.|+.|.. .|-...... . ..-|.|+.... .+++++..++++.+ .-
T Consensus 386 l~amryGtvpIv~~tGGLadTV~~~~~~~~-~~~gtGf~f~~---------------~~~~~l~~al~rA~-------~~ 442 (487)
T COG0297 386 LYAMRYGTLPIVRETGGLADTVVDRNEWLI-QGVGTGFLFLQ---------------TNPDHLANALRRAL-------VL 442 (487)
T ss_pred HHHHHcCCcceEcccCCccceecCccchhc-cCceeEEEEec---------------CCHHHHHHHHHHHH-------HH
Confidence 7899999999988873 343222111 2 32377777743 58899999999887 34
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036598 161 MRKRARKLSELAKIAVSKGGSSYVNVGLLID 191 (212)
Q Consensus 161 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~ 191 (212)
++.....+....+.++...-+-...+.+.++
T Consensus 443 y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~ 473 (487)
T COG0297 443 YRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473 (487)
T ss_pred hhCCHHHHHHHHHhhcccccCchhHHHHHHH
Confidence 4444333444444444434333333444443
No 235
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=24.69 E-value=4.3e+02 Score=22.31 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=18.5
Q ss_pred HHHH-HcCCCeeccCcccchhhHHHHHHHHhcceeEeec
Q 036598 85 LESV-SSGVPMITWPLFAEQFYNENFVLTHWKIGVGVGV 122 (212)
Q Consensus 85 ~eal-~~GvP~i~iP~~~DQ~~na~~v~~~~g~G~~~~~ 122 (212)
-|.+ ..|+|.|+|.-..--... ..+ +..|+|..+-+
T Consensus 79 RE~l~~~~iP~IvI~D~p~~k~k-d~l-~~~g~GYIivk 115 (276)
T PF01993_consen 79 REMLSAKGIPCIVISDAPTKKAK-DAL-EEEGFGYIIVK 115 (276)
T ss_dssp HHHHHHSSS-EEEEEEGGGGGGH-HHH-HHTT-EEEEET
T ss_pred HHHHHhCCCCEEEEcCCCchhhH-HHH-HhcCCcEEEEe
Confidence 3443 479999988432111111 234 55699999944
No 236
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=24.50 E-value=64 Score=27.80 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=29.1
Q ss_pred hcCCCCccceeecCChhhHHHHHH----cCCCeeccCcccc
Q 036598 66 ILNHPAVGGFMTHCGWNSVLESVS----SGVPMITWPLFAE 102 (212)
Q Consensus 66 il~~~~~~~~v~hgG~~sv~eal~----~GvP~i~iP~~~D 102 (212)
.|..-+++.+|.=||-+|+.-+.. .++|+|.+|-.-|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 455667888999999998876643 7999999997543
No 237
>PRK13055 putative lipid kinase; Reviewed
Probab=24.38 E-value=1.9e+02 Score=24.96 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=20.8
Q ss_pred ceeecCChhhHHHHHHc------CCCeeccCc
Q 036598 74 GFMTHCGWNSVLESVSS------GVPMITWPL 99 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~------GvP~i~iP~ 99 (212)
.+|--||-||+.|++.. ..|+-++|.
T Consensus 62 ~vvv~GGDGTl~evvngl~~~~~~~~LgiiP~ 93 (334)
T PRK13055 62 LIIAAGGDGTINEVVNGIAPLEKRPKMAIIPA 93 (334)
T ss_pred EEEEECCCCHHHHHHHHHhhcCCCCcEEEECC
Confidence 48999999999998632 467888996
No 238
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=23.96 E-value=48 Score=26.95 Aligned_cols=21 Identities=14% Similarity=-0.118 Sum_probs=17.8
Q ss_pred ceeecCChhhHHHHHHcCCCe
Q 036598 74 GFMTHCGWNSVLESVSSGVPM 94 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~ 94 (212)
++|+|||...+.-+...|+|.
T Consensus 178 lvVsHg~vir~l~~~~~~~~~ 198 (228)
T PRK14119 178 LVSAHGNSIRALIKYLEDVSD 198 (228)
T ss_pred EEEeChHHHHHHHHHHhCCCH
Confidence 599999998888888888774
No 239
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=23.60 E-value=61 Score=23.64 Aligned_cols=27 Identities=19% Similarity=0.121 Sum_probs=20.7
Q ss_pred ceeecCChhhHHHHHH----cC-----CCeeccCcc
Q 036598 74 GFMTHCGWNSVLESVS----SG-----VPMITWPLF 100 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~----~G-----vP~i~iP~~ 100 (212)
.+|.-||-||+.|.+- .. .|+.++|..
T Consensus 52 ~vvv~GGDGTi~~vvn~l~~~~~~~~~~plgiiP~G 87 (124)
T smart00046 52 RVLVCGGDGTVGWVLNALDKRELPLPEPPVAVLPLG 87 (124)
T ss_pred EEEEEccccHHHHHHHHHHhcccccCCCcEEEeCCC
Confidence 4899999999999853 23 677888874
No 240
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=23.39 E-value=4.5e+02 Score=23.14 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHhhCCceEEEEEeCCc-ccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCChhhHHHHHH
Q 036598 11 FAESQLLEIALGLESSNICFIWVIKSDA-FLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCGWNSVLESVS 89 (212)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~viw~~~~~~-~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~ 89 (212)
++.+.+.+.++-+.+.|.+++.++.... ...++. + ..++.+..-+.-..+ ++.--|.--+..-..
T Consensus 46 fs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~-~-----------~~~l~~l~e~GvDav--iv~Dpg~i~l~~e~~ 111 (347)
T COG0826 46 FSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELET-L-----------ERYLDRLVELGVDAV--IVADPGLIMLARERG 111 (347)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeccccccchhhH-H-----------HHHHHHHHHcCCCEE--EEcCHHHHHHHHHhC
Confidence 5667788888888888998888776532 111110 0 011111110110111 222222222223333
Q ss_pred cCCCeeccCccc-chhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHH
Q 036598 90 SGVPMITWPLFA-EQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQF 150 (212)
Q Consensus 90 ~GvP~i~iP~~~-DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 150 (212)
...|+..-++.. .-..-+... .++|+-..+-..+ ++.++|.+..+++
T Consensus 112 p~l~ih~S~q~~v~N~~~~~f~-~~~G~~rvVl~rE-------------ls~~ei~~i~~~~ 159 (347)
T COG0826 112 PDLPIHVSTQANVTNAETAKFW-KELGAKRVVLPRE-------------LSLEEIKEIKEQT 159 (347)
T ss_pred CCCcEEEeeeEecCCHHHHHHH-HHcCCEEEEeCcc-------------CCHHHHHHHHHhC
Confidence 447777766643 444455555 5568777776655 8888888877765
No 241
>PLN02859 glutamine-tRNA ligase
Probab=23.30 E-value=1.6e+02 Score=29.03 Aligned_cols=51 Identities=18% Similarity=0.222 Sum_probs=30.1
Q ss_pred hhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCc-cc--hHHHHHHHHHHHHHHH
Q 036598 104 FYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGG-EE--VEGMRKRARKLSELAK 173 (212)
Q Consensus 104 ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~--~~~~~~~a~~l~~~~~ 173 (212)
..+...+.++.|+|+.+ |+++|.++|.+++ +.. +. -+.|+.|...+-..++
T Consensus 103 ~~d~~~Fek~CGVGV~V------------------T~EqI~~~V~~~i-~~~k~~il~~RY~~n~g~ll~~~r 156 (788)
T PLN02859 103 SFDLNKFEEACGVGVVV------------------SPEDIEAAVNEVF-EENKEKILEQRYRTNVGDLLGQVR 156 (788)
T ss_pred ccCHHHHHHhCCCCEEE------------------CHHHHHHHHHHHH-HhhHHHHHHhcccccHHHHHHHHH
Confidence 33334444656999887 7789999999888 421 00 1234444455555555
No 242
>PRK13463 phosphatase PhoE; Provisional
Probab=23.21 E-value=53 Score=26.10 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=18.5
Q ss_pred ceeecCChhhHHHHHHcCCCee
Q 036598 74 GFMTHCGWNSVLESVSSGVPMI 95 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i 95 (212)
++|+|||...+.-+.+.|.|.-
T Consensus 147 lvVsHg~~ir~~~~~~~~~~~~ 168 (203)
T PRK13463 147 LIVSHAAAAKLLVGHFAGIEIE 168 (203)
T ss_pred EEEeChHHHHHHHHHHhCCCHH
Confidence 6899999998888888887754
No 243
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=22.94 E-value=1.8e+02 Score=27.01 Aligned_cols=79 Identities=10% Similarity=0.107 Sum_probs=45.4
Q ss_pred HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC--------hhhhcCCCCccceeecCCh------
Q 036598 16 LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP--------QVLILNHPAVGGFMTHCGW------ 81 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p--------~~~il~~~~~~~~v~hgG~------ 81 (212)
...+++.|++.|+..++.++......|-+.+. ..+++.+..--. ...-...-...++++|.|-
T Consensus 11 ~~~l~~~L~~~GV~~vFg~pG~~~~~l~~al~---~~~~i~~v~~rhE~~A~~~Adgyar~tg~~gv~~~t~GpG~~N~~ 87 (557)
T PRK08199 11 GQILVDALRANGVERVFCVPGESYLAVLDALH---DETDIRVIVCRQEGGAAMMAEAYGKLTGRPGICFVTRGPGATNAS 87 (557)
T ss_pred HHHHHHHHHHcCCCEEEeCCCcchhHHHHHhh---ccCCCcEEEeccHHHHHHHHHHHHHhcCCCEEEEeCCCccHHHHH
Confidence 45577889999999999887654111112221 112233222111 1000112233448888884
Q ss_pred hhHHHHHHcCCCeecc
Q 036598 82 NSVLESVSSGVPMITW 97 (212)
Q Consensus 82 ~sv~eal~~GvP~i~i 97 (212)
+.+.+|...++|+|++
T Consensus 88 ~gi~~A~~~~~Pvl~i 103 (557)
T PRK08199 88 IGVHTAFQDSTPMILF 103 (557)
T ss_pred HHHHHHhhcCCCEEEE
Confidence 5889999999999988
No 244
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=22.75 E-value=58 Score=25.75 Aligned_cols=22 Identities=9% Similarity=-0.071 Sum_probs=17.8
Q ss_pred ceeecCChhhHHHHHHcCCCee
Q 036598 74 GFMTHCGWNSVLESVSSGVPMI 95 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i 95 (212)
++|+|||.....=+.+.|.|.-
T Consensus 148 liVsHg~~ir~ll~~~lg~~~~ 169 (204)
T TIGR03848 148 VACSHGDVIKSVLADALGMHLD 169 (204)
T ss_pred EEEeCChHHHHHHHHHhCCCHH
Confidence 5899999988877777787764
No 245
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=22.65 E-value=14 Score=19.34 Aligned_cols=17 Identities=24% Similarity=0.698 Sum_probs=12.5
Q ss_pred ChhhHHHHHHcCCCeec
Q 036598 80 GWNSVLESVSSGVPMIT 96 (212)
Q Consensus 80 G~~sv~eal~~GvP~i~ 96 (212)
|.|+++-.++.|.|.++
T Consensus 1 gIGa~Lkvla~~LP~lI 17 (26)
T PF01372_consen 1 GIGAILKVLATGLPTLI 17 (26)
T ss_dssp -HHHHHHHHHTHHHHHH
T ss_pred ChhHHHHHHHhcChHHH
Confidence 56788888888887764
No 246
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=22.44 E-value=1.1e+02 Score=23.65 Aligned_cols=90 Identities=22% Similarity=0.247 Sum_probs=46.8
Q ss_pred HHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCChhhHHHHHHcCCCeecc
Q 036598 18 EIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCGWNSVLESVSSGVPMITW 97 (212)
Q Consensus 18 ~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~i 97 (212)
.+++.+...+.+|+..-....... ... ..++ .+.+...+++.+++ ++.|.
T Consensus 50 ~vA~~l~~fG~~V~~~d~~~~~~~---~~~----~~~~---~~~~l~ell~~aDi--v~~~~------------------ 99 (178)
T PF02826_consen 50 AVARRLKAFGMRVIGYDRSPKPEE---GAD----EFGV---EYVSLDELLAQADI--VSLHL------------------ 99 (178)
T ss_dssp HHHHHHHHTT-EEEEEESSCHHHH---HHH----HTTE---EESSHHHHHHH-SE--EEE-S------------------
T ss_pred eEeeeeecCCceeEEecccCChhh---hcc----cccc---eeeehhhhcchhhh--hhhhh------------------
Confidence 445555556888775544332100 010 1122 44566677777776 66665
Q ss_pred Ccc--cchhhHHHHHHHHhcce-eEeeccCCccccccchhccccCHHHHHHHHH
Q 036598 98 PLF--AEQFYNENFVLTHWKIG-VGVGVESGLAWGEEEKIGVLVRRDRVEKVVY 148 (212)
Q Consensus 98 P~~--~DQ~~na~~v~~~~g~G-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~ 148 (212)
|.. ..+..|+..+ +.++=| +.++..+ +..+..+++.++++
T Consensus 100 plt~~T~~li~~~~l-~~mk~ga~lvN~aR----------G~~vde~aL~~aL~ 142 (178)
T PF02826_consen 100 PLTPETRGLINAEFL-AKMKPGAVLVNVAR----------GELVDEDALLDALE 142 (178)
T ss_dssp SSSTTTTTSBSHHHH-HTSTTTEEEEESSS----------GGGB-HHHHHHHHH
T ss_pred ccccccceeeeeeee-eccccceEEEeccc----------hhhhhhhHHHHHHh
Confidence 443 2456677877 656644 5555544 45577777777665
No 247
>TIGR00075 hypD hydrogenase expression/formation protein HypD. HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes. This protein has been found in gram-negative and gram-positive bacteria and Archaea.
Probab=22.40 E-value=46 Score=29.51 Aligned_cols=66 Identities=15% Similarity=0.217 Sum_probs=47.3
Q ss_pred HHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036598 112 THWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAVSKGGSSYVNVGLLID 191 (212)
Q Consensus 112 ~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~li~ 191 (212)
++.++-.++.. +.+.+|..+|..++ +.+.++-.++-..-.+++.+.|+.. +.++|+
T Consensus 215 ~~y~~P~VVaG---------------FEp~DiL~~i~~ll-------~qi~~g~~~v~N~Y~R~V~~eGN~~--Aq~~i~ 270 (369)
T TIGR00075 215 EKYKIPIVIAG---------------FEPVDILQAIYMLL-------KQAISGEAKVENQYKRAVKPEGNVK--AQKAID 270 (369)
T ss_pred HHcCCCeEEec---------------cCHHHHHHHHHHHH-------HHHHCCCceEEEeeceeeCCccCHH--HHHHHH
Confidence 55688777754 88888888888887 4555555555566666777788755 888999
Q ss_pred HHHhhhhhhh
Q 036598 192 DLLNQKVERL 201 (212)
Q Consensus 192 ~l~~~~~~~~ 201 (212)
++....+..|
T Consensus 271 ~vFe~~d~~W 280 (369)
T TIGR00075 271 EVFEREDREW 280 (369)
T ss_pred HHcccCCCcc
Confidence 8877665444
No 248
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=21.98 E-value=4.4e+02 Score=21.92 Aligned_cols=32 Identities=9% Similarity=0.301 Sum_probs=21.3
Q ss_pred hhcCCCCccceeecCChhhHHHHHHcCCCeeccCc
Q 036598 65 LILNHPAVGGFMTHCGWNSVLESVSSGVPMITWPL 99 (212)
Q Consensus 65 ~il~~~~~~~~v~hgG~~sv~eal~~GvP~i~iP~ 99 (212)
.+++++++ +|+-= .-+..-|+.+|+|.+.+++
T Consensus 246 ~~i~~~~~--vI~~R-lH~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 246 GLFASARL--VIGMR-LHALILAAAAGVPFVALSY 277 (298)
T ss_pred HHHhhCCE--EEEec-hHHHHHHHHcCCCEEEeec
Confidence 35666665 76633 3345567789999998854
No 249
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.26 E-value=83 Score=27.03 Aligned_cols=27 Identities=15% Similarity=0.241 Sum_probs=21.5
Q ss_pred cceeecCChhhHHHHHHc----CCCeeccCc
Q 036598 73 GGFMTHCGWNSVLESVSS----GVPMITWPL 99 (212)
Q Consensus 73 ~~~v~hgG~~sv~eal~~----GvP~i~iP~ 99 (212)
.++|+-||-||+++++.. ++|++.+..
T Consensus 59 d~vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 59 DLAIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred CEEEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 349999999999999753 778887754
No 250
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=21.16 E-value=2.9e+02 Score=25.86 Aligned_cols=79 Identities=14% Similarity=0.099 Sum_probs=45.8
Q ss_pred HHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeec--------cChhhhcCCCCccceeecCCh------
Q 036598 16 LLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGW--------APQVLILNHPAVGGFMTHCGW------ 81 (212)
Q Consensus 16 ~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~--------~p~~~il~~~~~~~~v~hgG~------ 81 (212)
-..+++.|.+.|+..++-++......|-+.+ ..+++.+... +-...-...-+..++++|.|-
T Consensus 9 ~~~l~~~L~~~GV~~vFGvpG~~~~~l~dal----~~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv~~~t~GPG~~n~~ 84 (588)
T PRK07525 9 SEAFVETLQAHGITHAFGIIGSAFMDASDLF----PPAGIRFIDVAHEQNAGHMADGYTRVTGRMGMVIGQNGPGITNFV 84 (588)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCchHHHHHHH----hccCCCEEEecCHHHHHHHHHHHHHHhCCCEEEEEcCCccHHHHH
Confidence 3457788888899999988876411111222 1123332221 111111112234448888874
Q ss_pred hhHHHHHHcCCCeeccC
Q 036598 82 NSVLESVSSGVPMITWP 98 (212)
Q Consensus 82 ~sv~eal~~GvP~i~iP 98 (212)
+.+.+|...++|+|++.
T Consensus 85 ~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 85 TAVATAYWAHTPVVLVT 101 (588)
T ss_pred HHHHHHhhcCCCEEEEe
Confidence 57889999999999995
No 251
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=20.74 E-value=60 Score=24.76 Aligned_cols=21 Identities=29% Similarity=0.330 Sum_probs=17.3
Q ss_pred ceeecCChhhHHHHHHcCCCe
Q 036598 74 GFMTHCGWNSVLESVSSGVPM 94 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~ 94 (212)
++|+|||...+.-+.+.|.|.
T Consensus 141 lvVsHg~~i~~l~~~~~~~~~ 161 (177)
T TIGR03162 141 LIVTHGGVIRALLAHLLGLPL 161 (177)
T ss_pred EEEECHHHHHHHHHHHhCCCH
Confidence 589999998888887778764
No 252
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=20.71 E-value=2.9e+02 Score=24.76 Aligned_cols=77 Identities=16% Similarity=0.085 Sum_probs=43.6
Q ss_pred HHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccC--------hhhhcCCCCccceeecCCh------hh
Q 036598 18 EIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAP--------QVLILNHPAVGGFMTHCGW------NS 83 (212)
Q Consensus 18 ~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p--------~~~il~~~~~~~~v~hgG~------~s 83 (212)
.+++.|.+.|+..++-++......+-+.+. ..+++.+..... .......-..+++++|.|- +.
T Consensus 5 ~l~~~L~~~GV~~vFg~pG~~~~~l~dal~---~~~~i~~v~~~hE~~A~~mAdgyar~tg~~gv~~~t~GpG~~N~l~g 81 (432)
T TIGR00173 5 VLVEELVRLGVRHVVISPGSRSTPLALAAA---EHPRLRVHVHIDERSAGFFALGLAKASGRPVAVVCTSGTAVANLLPA 81 (432)
T ss_pred HHHHHHHHcCCCEEEECCCcccHHHHHHHH---hCCCcEEEEecCCccHHHHHHHHHhccCCCEEEEECCcchHhhhhHH
Confidence 466788888998888877654111112221 123343322211 1100111223448888774 58
Q ss_pred HHHHHHcCCCeecc
Q 036598 84 VLESVSSGVPMITW 97 (212)
Q Consensus 84 v~eal~~GvP~i~i 97 (212)
+.+|...++|+|++
T Consensus 82 l~~A~~~~~Pvl~i 95 (432)
T TIGR00173 82 VIEASYSGVPLIVL 95 (432)
T ss_pred HHHhcccCCcEEEE
Confidence 88999999999999
No 253
>PLN02470 acetolactate synthase
Probab=20.64 E-value=7e+02 Score=23.29 Aligned_cols=59 Identities=14% Similarity=0.049 Sum_probs=32.2
Q ss_pred eeecCChhhHHHH--HHcCCCee--c--cCccc-c-hhhHHHHHHHHhcc-eeEeeccCCccccccchhccccCHHHHHH
Q 036598 75 FMTHCGWNSVLES--VSSGVPMI--T--WPLFA-E-QFYNENFVLTHWKI-GVGVGVESGLAWGEEEKIGVLVRRDRVEK 145 (212)
Q Consensus 75 ~v~hgG~~sv~ea--l~~GvP~i--~--iP~~~-D-Q~~na~~v~~~~g~-G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 145 (212)
+++.+|++.+... ..++.+.. . .|... + .++.+..+ +.+|+ |..+ -+.++|..
T Consensus 477 V~NN~~yg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~iA-~a~G~~~~~v-----------------~~~~el~~ 538 (585)
T PLN02470 477 VLNNQHLGMVVQWEDRFYKANRAHTYLGDPDAEAEIFPDFLKFA-EGCKIPAARV-----------------TRKSDLRE 538 (585)
T ss_pred EEeCCcchHHHHHHHHHhCCceeeeecCccccccCCCCCHHHHH-HHCCCeEEEE-----------------CCHHHHHH
Confidence 7888888877543 22332211 1 11110 0 14455555 65564 3333 46788999
Q ss_pred HHHHHh
Q 036598 146 VVYQFM 151 (212)
Q Consensus 146 ai~~vl 151 (212)
++++.+
T Consensus 539 al~~a~ 544 (585)
T PLN02470 539 AIQKML 544 (585)
T ss_pred HHHHHH
Confidence 998887
No 254
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=20.63 E-value=2e+02 Score=22.72 Aligned_cols=32 Identities=9% Similarity=0.341 Sum_probs=21.6
Q ss_pred CCCCccceeecCCh---hhHHHHHHcCCCeeccCccc
Q 036598 68 NHPAVGGFMTHCGW---NSVLESVSSGVPMITWPLFA 101 (212)
Q Consensus 68 ~~~~~~~~v~hgG~---~sv~eal~~GvP~i~iP~~~ 101 (212)
.+|++ +|...+. ....+.+..|+|+++++...
T Consensus 59 l~PDl--Ii~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 59 LKPDL--IIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp T--SE--EEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred CCCCE--EEEeccccchHHHHHHhcccceEEEeeccc
Confidence 46787 6665555 67777788888888887643
No 255
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=20.54 E-value=85 Score=27.24 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=28.9
Q ss_pred hcCCCCccceeecCChhhHHHHHH---cCCCeeccCcccc
Q 036598 66 ILNHPAVGGFMTHCGWNSVLESVS---SGVPMITWPLFAE 102 (212)
Q Consensus 66 il~~~~~~~~v~hgG~~sv~eal~---~GvP~i~iP~~~D 102 (212)
.|..-+++.+|.=||-+|+.-+.. +|+|+|.+|-.-|
T Consensus 87 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTID 126 (317)
T cd00763 87 QLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTID 126 (317)
T ss_pred HHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEeccccc
Confidence 355667888999999988877744 5999999997533
No 256
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=20.43 E-value=60 Score=26.39 Aligned_cols=22 Identities=14% Similarity=0.009 Sum_probs=17.6
Q ss_pred ceeecCChhhHHHHHHcCCCee
Q 036598 74 GFMTHCGWNSVLESVSSGVPMI 95 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i 95 (212)
++|+|||...+.=+...|.|.-
T Consensus 177 lvVsHggvir~ll~~~l~~~~~ 198 (227)
T PRK14118 177 LVAAHGNSLRALAKHIEGISDA 198 (227)
T ss_pred EEEeCHHHHHHHHHHHhCCCHH
Confidence 5899999888887777787653
No 257
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=20.22 E-value=1.9e+02 Score=22.81 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=23.3
Q ss_pred hhhcCCCCccceeecCChhhHHHHHH---------cCCCeeccC
Q 036598 64 VLILNHPAVGGFMTHCGWNSVLESVS---------SGVPMITWP 98 (212)
Q Consensus 64 ~~il~~~~~~~~v~hgG~~sv~eal~---------~GvP~i~iP 98 (212)
..+|...+-.+++--||.||+-|.+. +.+|++++=
T Consensus 90 k~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 90 KAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 34444333345677799999998843 488988864
No 258
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]
Probab=20.19 E-value=4.5e+02 Score=24.59 Aligned_cols=114 Identities=16% Similarity=0.157 Sum_probs=60.4
Q ss_pred eeCCCCCCCHHHHHHHHHHHhhCCceEEEEEeCCcccccchhHHHhhcCCCeEEeeccChhhhcCCCCccceeecCCh--
Q 036598 4 CFGSLCEFAESQLLEIALGLESSNICFIWVIKSDAFLLLDKDFEERVKDRGLIIKGWAPQVLILNHPAVGGFMTHCGW-- 81 (212)
Q Consensus 4 s~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p~~~il~~~~~~~~v~hgG~-- 81 (212)
+||||+. -.=-.++.++..++..|+..-|...+.+ +.+.+..++-+.. |-+-++++.+|.
T Consensus 428 tfgTMGV---G~Gfalaaa~~~P~~~V~~veGDsaFGf-----------SaME~ET~vR~~L----pvv~vV~NN~Giyg 489 (571)
T KOG1185|consen 428 TFGTMGV---GLGFALAAALAAPDRKVVCVEGDSAFGF-----------SAMELETFVRYKL----PVVIVVGNNNGIYG 489 (571)
T ss_pred ccccccc---chhHHHHHHhhCCCCeEEEEecCcccCc-----------chhhHHHHHHhcC----CeEEEEecCCcccc
Confidence 4666654 1223455667678888777766544211 1111112221111 222235555443
Q ss_pred --hhHHHHHHcCCCeeccCcccc--hhhHHHHHHHHhc-ceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcC
Q 036598 82 --NSVLESVSSGVPMITWPLFAE--QFYNENFVLTHWK-IGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMING 154 (212)
Q Consensus 82 --~sv~eal~~GvP~i~iP~~~D--Q~~na~~v~~~~g-~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 154 (212)
--..+.+.-|.|....|-... +-..-..+ +.+| -|..+ -+.++|.+++++.. .+
T Consensus 490 ~d~~~~~~I~e~~~~~~~p~~~l~~~~rY~~v~-ka~G~kG~~v-----------------~t~~el~~~l~~a~-q~ 548 (571)
T KOG1185|consen 490 LDDDGWKQISEQDPTLDLPPTALLANTRYDKVA-KAFGGKGYFV-----------------STVEELLAALQQAC-QD 548 (571)
T ss_pred cCcccHHHHhhcCcccCCCcccccccccHHHHH-HHcCCCceee-----------------CCHHHHHHHHHHHH-hc
Confidence 555677778999998887432 11111222 3334 36666 46788888888877 54
No 259
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=20.18 E-value=1.6e+02 Score=24.74 Aligned_cols=24 Identities=25% Similarity=0.483 Sum_probs=19.0
Q ss_pred eecCC-hhhHHHHHHcCCCeeccCc
Q 036598 76 MTHCG-WNSVLESVSSGVPMITWPL 99 (212)
Q Consensus 76 v~hgG-~~sv~eal~~GvP~i~iP~ 99 (212)
|++.| .+...|+..+|+|.|.+-+
T Consensus 109 v~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 109 TLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred EecchhHHHHHHHHHcCCCeEEEEc
Confidence 44444 4678999999999998886
No 260
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.15 E-value=3.4e+02 Score=21.09 Aligned_cols=72 Identities=10% Similarity=0.114 Sum_probs=41.2
Q ss_pred cCcccchhhHHHHHHHHhcceeEeeccCCccccccchhccccCHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHH
Q 036598 97 WPLFAEQFYNENFVLTHWKIGVGVGVESGLAWGEEEKIGVLVRRDRVEKVVYQFMINGGEEVEGMRKRARKLSELAKIAV 176 (212)
Q Consensus 97 iP~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~~a~~l~~~~~~~~ 176 (212)
.|+...+..+|+.++++ +..-. .-..+.|.+.+..++ .|+ +.-+-.+.++++.+.++
T Consensus 78 yPWt~~~L~aa~el~ee------~eeLs------------~deke~~~~sl~dL~-~d~---PkT~vA~~rfKk~~~K~- 134 (158)
T PF10083_consen 78 YPWTENALEAANELIEE------DEELS------------PDEKEQFKESLPDLT-KDT---PKTKVAATRFKKILSKA- 134 (158)
T ss_pred CchHHHHHHHHHHHHHH------hhcCC------------HHHHHHHHhhhHHHh-hcC---CccHHHHHHHHHHHHHH-
Confidence 57767778888887564 21100 023456888999888 664 45555666666666644
Q ss_pred hcCCchHHHHHHHHHHH
Q 036598 177 SKGGSSYVNVGLLIDDL 193 (212)
Q Consensus 177 ~~~g~~~~~~~~li~~l 193 (212)
|......+.++|-++
T Consensus 135 --g~~v~~~~~dIlVdv 149 (158)
T PF10083_consen 135 --GSIVGDAIRDILVDV 149 (158)
T ss_pred --hHHHHHHHHHHHHHH
Confidence 433333344444444
No 261
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=20.14 E-value=57 Score=25.71 Aligned_cols=22 Identities=27% Similarity=0.258 Sum_probs=18.1
Q ss_pred ceeecCChhhHHHHHHcCCCee
Q 036598 74 GFMTHCGWNSVLESVSSGVPMI 95 (212)
Q Consensus 74 ~~v~hgG~~sv~eal~~GvP~i 95 (212)
++|+|||...+.-+...|.|.-
T Consensus 145 liVsHg~~i~~l~~~~~~~~~~ 166 (199)
T PRK15004 145 LIVSHQGVLSLLIARLLGMPAE 166 (199)
T ss_pred EEEcChHHHHHHHHHHhCCCHH
Confidence 5899999988888888887753
No 262
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=20.07 E-value=1.3e+02 Score=22.39 Aligned_cols=28 Identities=18% Similarity=0.155 Sum_probs=19.5
Q ss_pred CEEeeCCCCCCCHHHHHHHHHHHhhCCc
Q 036598 1 LYVCFGSLCEFAESQLLEIALGLESSNI 28 (212)
Q Consensus 1 V~vs~GS~~~~~~~~~~~~~~~l~~~~~ 28 (212)
||+++||-.......+...+..|.+.+.
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~~ 28 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALPV 28 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCCc
Confidence 6999999986555556666666765543
Done!