Query 036602
Match_columns 121
No_of_seqs 212 out of 1435
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:41:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036602.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036602hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 98.7 1.3E-08 2.9E-13 79.9 5.1 60 1-60 292-353 (361)
2 PLN00113 leucine-rich repeat r 97.3 0.00042 9.1E-09 60.0 4.9 52 10-61 900-953 (968)
3 cd05038 PTKc_Jak_rpt2 Catalyti 95.9 0.008 1.7E-07 43.9 3.2 31 29-59 253-283 (284)
4 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 95.3 0.019 4E-07 42.3 3.3 31 29-59 253-283 (284)
5 cd05094 PTKc_TrkC Catalytic do 95.2 0.024 5.3E-07 42.0 3.7 34 29-62 252-285 (291)
6 cd05063 PTKc_EphR_A2 Catalytic 95.2 0.027 5.9E-07 41.0 3.7 31 29-59 237-267 (268)
7 cd05045 PTKc_RET Catalytic dom 95.1 0.027 5.8E-07 41.7 3.7 33 29-61 256-288 (290)
8 cd05053 PTKc_FGFR Catalytic do 95.0 0.029 6.3E-07 41.4 3.6 32 29-60 261-292 (293)
9 cd05148 PTKc_Srm_Brk Catalytic 95.0 0.028 6.1E-07 40.7 3.5 31 29-59 231-261 (261)
10 cd05033 PTKc_EphR Catalytic do 95.0 0.03 6.5E-07 40.8 3.6 31 29-59 235-265 (266)
11 cd05052 PTKc_Abl Catalytic dom 95.0 0.032 7E-07 40.6 3.7 31 29-59 232-262 (263)
12 cd05068 PTKc_Frk_like Catalyti 94.9 0.03 6.6E-07 40.6 3.2 30 29-58 231-260 (261)
13 cd05080 PTKc_Tyk2_rpt2 Catalyt 94.8 0.033 7.1E-07 41.0 3.4 32 29-60 251-282 (283)
14 cd05097 PTKc_DDR_like Catalyti 94.8 0.031 6.6E-07 41.6 3.2 29 29-57 266-294 (295)
15 cd05051 PTKc_DDR Catalytic dom 94.7 0.032 6.9E-07 41.2 3.1 29 29-57 267-295 (296)
16 cd05112 PTKc_Itk Catalytic dom 94.7 0.032 6.9E-07 40.2 2.9 28 29-56 228-255 (256)
17 cd05093 PTKc_TrkB Catalytic do 94.6 0.041 8.9E-07 40.7 3.5 34 29-62 249-282 (288)
18 cd05072 PTKc_Lyn Catalytic dom 94.6 0.041 8.9E-07 39.9 3.5 30 29-58 231-260 (261)
19 cd05035 PTKc_Axl_like Catalyti 94.6 0.044 9.5E-07 39.8 3.5 32 28-59 241-272 (273)
20 cd05102 PTKc_VEGFR3 Catalytic 94.5 0.039 8.3E-07 41.9 3.2 31 30-60 305-335 (338)
21 cd05048 PTKc_Ror Catalytic Dom 94.5 0.043 9.3E-07 40.2 3.3 30 29-58 253-282 (283)
22 cd05050 PTKc_Musk Catalytic do 94.4 0.048 1E-06 40.2 3.4 30 29-58 259-288 (288)
23 cd05058 PTKc_Met_Ron Catalytic 94.4 0.052 1.1E-06 39.3 3.5 32 29-60 229-260 (262)
24 cd08528 STKc_Nek10 Catalytic d 94.3 0.047 1E-06 39.7 3.2 28 30-57 241-268 (269)
25 cd05075 PTKc_Axl Catalytic dom 94.3 0.058 1.3E-06 39.2 3.6 31 29-59 241-271 (272)
26 cd05060 PTKc_Syk_like Catalyti 94.3 0.05 1.1E-06 39.4 3.3 31 29-59 225-255 (257)
27 cd05039 PTKc_Csk_like Catalyti 94.2 0.049 1.1E-06 39.3 3.1 31 29-59 226-256 (256)
28 PF07714 Pkinase_Tyr: Protein 94.2 0.045 9.9E-07 40.1 2.9 28 29-56 232-259 (259)
29 cd05043 PTK_Ryk Pseudokinase d 94.2 0.059 1.3E-06 39.5 3.5 32 30-61 247-278 (280)
30 cd05114 PTKc_Tec_Rlk Catalytic 94.2 0.053 1.1E-06 39.2 3.2 28 29-56 228-255 (256)
31 cd05074 PTKc_Tyro3 Catalytic d 94.2 0.056 1.2E-06 39.4 3.3 31 29-59 242-272 (273)
32 cd05054 PTKc_VEGFR Catalytic d 94.2 0.051 1.1E-06 41.7 3.2 32 29-60 303-334 (337)
33 cd05047 PTKc_Tie Catalytic dom 94.1 0.059 1.3E-06 39.4 3.4 31 29-59 238-268 (270)
34 cd05095 PTKc_DDR2 Catalytic do 94.1 0.06 1.3E-06 40.0 3.4 29 29-57 267-295 (296)
35 cd05111 PTK_HER3 Pseudokinase 94.1 0.082 1.8E-06 39.0 4.1 33 30-62 239-271 (279)
36 cd05079 PTKc_Jak1_rpt2 Catalyt 94.1 0.068 1.5E-06 39.4 3.6 31 29-59 253-283 (284)
37 cd05101 PTKc_FGFR2 Catalytic d 94.1 0.072 1.6E-06 39.7 3.8 34 29-62 266-299 (304)
38 cd05089 PTKc_Tie1 Catalytic do 94.0 0.071 1.5E-06 39.7 3.6 38 29-66 245-282 (297)
39 cd05084 PTKc_Fes Catalytic dom 94.0 0.06 1.3E-06 38.8 3.1 29 29-57 223-251 (252)
40 cd05098 PTKc_FGFR1 Catalytic d 93.8 0.082 1.8E-06 39.5 3.8 34 29-62 269-302 (307)
41 cd05066 PTKc_EphR_A Catalytic 93.8 0.078 1.7E-06 38.6 3.6 30 30-59 237-266 (267)
42 cd08228 STKc_Nek6 Catalytic do 93.8 0.082 1.8E-06 38.3 3.6 32 29-60 235-266 (267)
43 cd08229 STKc_Nek7 Catalytic do 93.7 0.094 2E-06 38.0 3.8 30 30-59 236-265 (267)
44 cd05104 PTKc_Kit Catalytic dom 93.7 0.062 1.3E-06 41.9 3.0 29 30-58 345-373 (375)
45 cd05059 PTKc_Tec_like Catalyti 93.6 0.071 1.5E-06 38.6 3.0 28 29-56 228-255 (256)
46 cd05096 PTKc_DDR1 Catalytic do 93.6 0.078 1.7E-06 39.5 3.3 29 29-57 275-303 (304)
47 PHA02988 hypothetical protein; 93.6 0.1 2.2E-06 38.9 3.8 31 30-60 250-280 (283)
48 cd05065 PTKc_EphR_B Catalytic 93.6 0.085 1.8E-06 38.4 3.4 30 30-59 239-268 (269)
49 cd05091 PTKc_Ror2 Catalytic do 93.6 0.084 1.8E-06 38.7 3.3 28 30-57 254-281 (283)
50 cd05082 PTKc_Csk Catalytic dom 93.4 0.081 1.8E-06 38.2 3.0 30 30-59 227-256 (256)
51 cd05062 PTKc_IGF-1R Catalytic 93.4 0.078 1.7E-06 38.9 2.9 29 29-57 248-276 (277)
52 cd05085 PTKc_Fer Catalytic dom 93.4 0.093 2E-06 37.7 3.3 29 29-57 221-249 (250)
53 cd08224 STKc_Nek6_Nek7 Catalyt 93.3 0.11 2.5E-06 37.4 3.7 31 30-60 236-266 (267)
54 cd05078 PTK_Jak2_Jak3_rpt1 Pse 93.2 0.066 1.4E-06 38.9 2.3 28 29-56 230-257 (258)
55 cd05100 PTKc_FGFR3 Catalytic d 93.2 0.24 5.3E-06 37.5 5.5 34 29-62 263-296 (334)
56 cd05103 PTKc_VEGFR2 Catalytic 93.2 0.093 2E-06 40.2 3.1 31 30-60 310-340 (343)
57 cd05099 PTKc_FGFR4 Catalytic d 93.1 0.14 3E-06 38.5 3.9 32 30-61 264-295 (314)
58 cd05064 PTKc_EphR_A10 Catalyti 93.0 0.12 2.6E-06 37.7 3.4 31 29-59 235-265 (266)
59 cd05055 PTKc_PDGFR Catalytic d 92.9 0.14 3E-06 38.4 3.6 30 29-58 271-300 (302)
60 cd05070 PTKc_Fyn_Yrk Catalytic 92.9 0.13 2.9E-06 37.2 3.4 30 29-58 230-259 (260)
61 cd05049 PTKc_Trk Catalytic dom 92.8 0.14 3.1E-06 37.3 3.5 29 29-57 251-279 (280)
62 cd05106 PTKc_CSF-1R Catalytic 92.7 0.12 2.7E-06 40.2 3.3 30 30-59 343-372 (374)
63 cd05069 PTKc_Yes Catalytic dom 92.7 0.16 3.4E-06 36.9 3.6 30 29-58 230-259 (260)
64 cd05044 PTKc_c-ros Catalytic d 92.7 0.16 3.4E-06 36.9 3.6 28 30-57 241-268 (269)
65 cd05071 PTKc_Src Catalytic dom 92.6 0.17 3.8E-06 36.8 3.8 31 28-58 229-259 (262)
66 cd05073 PTKc_Hck Catalytic dom 92.6 0.16 3.5E-06 36.8 3.5 30 29-58 230-259 (260)
67 cd05067 PTKc_Lck_Blk Catalytic 92.6 0.15 3.1E-06 37.0 3.3 30 29-58 230-259 (260)
68 cd05113 PTKc_Btk_Bmx Catalytic 92.5 0.13 2.8E-06 37.4 3.0 29 29-57 228-256 (256)
69 cd05036 PTKc_ALK_LTK Catalytic 92.5 0.16 3.4E-06 37.3 3.4 29 29-57 248-276 (277)
70 cd05076 PTK_Tyk2_rpt1 Pseudoki 92.5 0.12 2.7E-06 38.1 2.8 27 30-56 247-273 (274)
71 cd05032 PTKc_InsR_like Catalyt 92.4 0.13 2.9E-06 37.4 3.0 29 29-57 248-276 (277)
72 cd05088 PTKc_Tie2 Catalytic do 92.3 0.17 3.6E-06 37.9 3.5 35 30-64 251-285 (303)
73 cd05083 PTKc_Chk Catalytic dom 92.3 0.15 3.2E-06 36.8 3.0 29 29-57 224-252 (254)
74 cd05041 PTKc_Fes_like Catalyti 92.2 0.14 3.1E-06 36.7 2.9 29 29-57 222-250 (251)
75 cd05108 PTKc_EGFR Catalytic do 92.2 0.17 3.6E-06 38.1 3.3 34 29-62 238-271 (316)
76 cd05061 PTKc_InsR Catalytic do 92.2 0.15 3.3E-06 37.7 3.1 31 29-59 248-278 (288)
77 cd05110 PTKc_HER4 Catalytic do 92.1 0.18 4E-06 37.6 3.4 34 29-62 238-271 (303)
78 cd05116 PTKc_Syk Catalytic dom 92.1 0.18 3.8E-06 36.6 3.2 29 30-58 226-254 (257)
79 cd05040 PTKc_Ack_like Catalyti 91.9 0.19 4E-06 36.2 3.2 29 29-57 228-256 (257)
80 cd05107 PTKc_PDGFR_beta Cataly 91.7 0.19 4E-06 39.9 3.2 31 29-59 369-399 (401)
81 cd05056 PTKc_FAK Catalytic dom 91.6 0.24 5.1E-06 36.1 3.5 32 30-61 236-267 (270)
82 cd05034 PTKc_Src_like Catalyti 91.5 0.25 5.3E-06 35.7 3.4 30 29-58 231-260 (261)
83 cd05105 PTKc_PDGFR_alpha Catal 91.4 0.2 4.2E-06 39.8 3.0 32 29-60 367-398 (400)
84 cd00192 PTKc Catalytic domain 91.3 0.2 4.3E-06 35.7 2.8 29 29-57 234-262 (262)
85 cd05109 PTKc_HER2 Catalytic do 91.2 0.28 6.1E-06 35.9 3.6 35 29-63 238-272 (279)
86 cd05077 PTK_Jak1_rpt1 Pseudoki 91.1 0.18 4E-06 36.8 2.5 28 29-56 234-261 (262)
87 cd05092 PTKc_TrkA Catalytic do 91.1 0.24 5.1E-06 36.5 3.0 29 29-57 251-279 (280)
88 cd05090 PTKc_Ror1 Catalytic do 91.0 0.28 6.1E-06 36.0 3.4 29 30-58 254-282 (283)
89 cd05037 PTK_Jak_rpt1 Pseudokin 90.9 0.21 4.4E-06 35.9 2.6 28 29-56 231-258 (259)
90 cd05115 PTKc_Zap-70 Catalytic 90.9 0.28 6.1E-06 35.7 3.3 31 29-59 225-255 (257)
91 smart00750 KIND kinase non-cat 90.7 0.36 7.8E-06 32.9 3.5 31 30-60 140-170 (176)
92 cd08217 STKc_Nek2 Catalytic do 89.9 0.32 6.9E-06 34.8 2.8 26 29-54 236-261 (265)
93 smart00219 TyrKc Tyrosine kina 89.4 0.33 7.2E-06 34.6 2.5 28 29-56 231-258 (258)
94 cd05046 PTK_CCK4 Pseudokinase 88.8 0.5 1.1E-05 34.4 3.2 29 29-57 246-274 (275)
95 cd07846 STKc_CDKL2_3 Catalytic 88.2 0.43 9.3E-06 34.9 2.5 26 29-54 257-282 (286)
96 cd08218 STKc_Nek1 Catalytic do 88.2 0.44 9.6E-06 34.2 2.6 25 30-54 228-252 (256)
97 cd08529 STKc_FA2-like Catalyti 88.1 0.52 1.1E-05 33.7 2.9 26 29-54 227-252 (256)
98 cd07835 STKc_CDK1_like Catalyt 88.0 0.4 8.8E-06 35.0 2.3 25 30-54 255-279 (283)
99 smart00220 S_TKc Serine/Threon 88.0 0.55 1.2E-05 32.8 2.8 26 29-54 215-240 (244)
100 cd05057 PTKc_EGFR_like Catalyt 87.6 0.78 1.7E-05 33.5 3.6 33 30-62 239-271 (279)
101 cd06642 STKc_STK25-YSK1 Cataly 87.6 0.62 1.3E-05 34.1 3.0 26 29-54 227-252 (277)
102 cd06621 PKc_MAPKK_Pek1_like Ca 86.9 0.72 1.6E-05 34.0 3.1 26 29-54 240-265 (287)
103 cd07840 STKc_CDK9_like Catalyt 86.8 0.64 1.4E-05 33.8 2.7 26 29-54 258-283 (287)
104 cd07833 STKc_CDKL Catalytic do 86.6 0.5 1.1E-05 34.5 2.1 26 29-54 259-284 (288)
105 cd07830 STKc_MAK_like Catalyti 86.3 0.8 1.7E-05 33.4 3.0 26 29-54 254-279 (283)
106 cd06620 PKc_MAPKK_Byr1_like Ca 86.2 0.66 1.4E-05 34.1 2.6 30 29-58 240-269 (284)
107 cd08223 STKc_Nek4 Catalytic do 86.2 0.68 1.5E-05 33.2 2.6 26 29-54 228-253 (257)
108 cd06612 STKc_MST1_2 Catalytic 86.1 0.6 1.3E-05 33.4 2.2 25 30-54 228-252 (256)
109 cd06624 STKc_ASK Catalytic dom 86.0 0.82 1.8E-05 33.2 2.9 25 30-54 240-264 (268)
110 cd06606 STKc_MAPKKK Catalytic 85.8 0.82 1.8E-05 32.3 2.8 26 29-54 231-256 (260)
111 cd06638 STKc_myosinIIIA Cataly 85.6 0.93 2E-05 33.1 3.1 26 30-55 258-283 (286)
112 cd08220 STKc_Nek8 Catalytic do 85.5 0.72 1.6E-05 33.0 2.4 25 30-54 228-252 (256)
113 cd08226 PK_STRAD_beta Pseudoki 85.3 1.4 2.9E-05 33.3 3.9 28 27-54 280-307 (328)
114 cd07831 STKc_MOK Catalytic dom 84.9 0.92 2E-05 33.0 2.8 26 29-54 253-278 (282)
115 cd05086 PTKc_Aatyk2 Catalytic 84.8 1.1 2.3E-05 32.7 3.1 24 33-57 244-267 (268)
116 cd08225 STKc_Nek5 Catalytic do 84.0 0.96 2.1E-05 32.3 2.5 25 30-54 229-253 (257)
117 cd05118 STKc_CMGC Catalytic do 84.0 1.1 2.5E-05 32.4 2.9 26 29-54 254-279 (283)
118 cd07861 STKc_CDK1_euk Catalyti 83.8 0.86 1.9E-05 33.2 2.2 24 31-54 258-281 (285)
119 PF00069 Pkinase: Protein kina 83.8 0.99 2.1E-05 32.2 2.5 26 29-54 231-256 (260)
120 cd05122 PKc_STE Catalytic doma 83.7 0.92 2E-05 31.9 2.3 26 29-54 225-250 (253)
121 cd06615 PKc_MEK Catalytic doma 83.5 0.9 2E-05 34.0 2.3 26 30-55 262-287 (308)
122 cd07841 STKc_CDK7 Catalytic do 83.4 1.1 2.5E-05 32.9 2.7 26 29-54 256-281 (298)
123 cd06640 STKc_MST4 Catalytic do 83.3 1.2 2.7E-05 32.5 2.9 28 28-55 226-253 (277)
124 cd06608 STKc_myosinIII_like Ca 83.2 1 2.2E-05 32.4 2.4 25 30-54 247-271 (275)
125 cd06649 PKc_MEK2 Catalytic dom 83.1 1.1 2.4E-05 34.0 2.6 25 30-54 276-300 (331)
126 cd08227 PK_STRAD_alpha Pseudok 83.0 0.87 1.9E-05 34.4 2.0 25 30-54 282-306 (327)
127 cd08216 PK_STRAD Pseudokinase 82.8 1.1 2.5E-05 33.2 2.6 26 29-54 269-294 (314)
128 cd06646 STKc_MAP4K5 Catalytic 82.8 0.77 1.7E-05 33.2 1.6 27 29-55 239-265 (267)
129 cd00180 PKc Catalytic domain o 82.7 1 2.2E-05 30.3 2.1 27 29-55 188-214 (215)
130 cd06639 STKc_myosinIIIB Cataly 82.7 1 2.2E-05 33.1 2.3 26 29-54 261-286 (291)
131 cd07847 STKc_CDKL1_4 Catalytic 82.7 1.2 2.6E-05 32.4 2.6 25 30-54 258-282 (286)
132 cd08219 STKc_Nek3 Catalytic do 82.5 1.3 2.8E-05 31.8 2.7 26 30-55 227-252 (255)
133 cd06609 STKc_MST3_like Catalyt 82.5 1.2 2.7E-05 32.3 2.6 25 30-54 226-250 (274)
134 cd06637 STKc_TNIK Catalytic do 82.0 1.4 3.1E-05 31.9 2.7 25 30-54 244-268 (272)
135 cd07860 STKc_CDK2_3 Catalytic 81.9 1.3 2.9E-05 32.3 2.6 24 31-54 257-280 (284)
136 cd07838 STKc_CDK4_6_like Catal 81.8 1.5 3.2E-05 31.9 2.8 26 29-54 258-283 (287)
137 cd06610 STKc_OSR1_SPAK Catalyt 81.8 1.4 3.1E-05 31.5 2.7 26 29-54 238-263 (267)
138 cd07842 STKc_CDK8_like Catalyt 81.6 1.3 2.9E-05 32.7 2.5 26 29-54 287-312 (316)
139 cd06629 STKc_MAPKKK_Bck1_like 81.6 1.4 3E-05 32.0 2.6 26 29-54 243-268 (272)
140 cd06641 STKc_MST3 Catalytic do 81.3 1.6 3.5E-05 31.9 2.9 26 30-55 228-253 (277)
141 cd06619 PKc_MKK5 Catalytic dom 81.1 1.2 2.6E-05 32.6 2.2 25 30-54 228-252 (279)
142 cd06616 PKc_MKK4 Catalytic dom 81.1 1.4 3E-05 32.3 2.4 26 29-54 241-266 (288)
143 cd07832 STKc_CCRK Catalytic do 80.8 1.6 3.5E-05 31.7 2.7 26 29-54 256-281 (286)
144 cd06618 PKc_MKK7 Catalytic dom 80.7 1.4 3.1E-05 32.5 2.5 27 29-55 247-273 (296)
145 cd06650 PKc_MEK1 Catalytic dom 80.6 1.8 3.8E-05 33.0 2.9 25 30-54 274-298 (333)
146 cd05087 PTKc_Aatyk1_Aatyk3 Cat 80.4 1.8 3.9E-05 31.4 2.8 24 33-57 245-268 (269)
147 KOG1989 ARK protein kinase fam 80.2 2.6 5.7E-05 36.6 4.0 51 11-61 263-313 (738)
148 cd07849 STKc_ERK1_2_like Catal 80.1 1.4 3E-05 33.5 2.2 26 30-55 267-292 (336)
149 PLN00009 cyclin-dependent kina 80.1 1.6 3.4E-05 32.2 2.4 25 30-54 259-283 (294)
150 KOG2345 Serine/threonine prote 80.1 2.6 5.7E-05 32.4 3.6 31 29-59 270-300 (302)
151 cd08530 STKc_CNK2-like Catalyt 80.0 1.9 4.1E-05 30.7 2.8 26 29-54 227-252 (256)
152 cd07829 STKc_CDK_like Catalyti 79.9 1.9 4.1E-05 31.2 2.8 26 29-54 253-278 (282)
153 cd07858 STKc_TEY_MAPK_plant Ca 79.9 1.4 3.1E-05 33.4 2.2 32 29-60 265-298 (337)
154 cd06626 STKc_MEKK4 Catalytic d 79.8 1.7 3.8E-05 31.1 2.6 25 30-54 236-260 (264)
155 cd06917 STKc_NAK1_like Catalyt 79.8 2 4.4E-05 31.2 2.9 26 29-54 229-254 (277)
156 cd07862 STKc_CDK6 Catalytic do 79.5 1.7 3.6E-05 31.9 2.4 24 31-54 263-286 (290)
157 cd06605 PKc_MAPKK Catalytic do 79.3 2.1 4.6E-05 30.7 2.9 25 30-54 232-256 (265)
158 cd08221 STKc_Nek9 Catalytic do 79.2 1.7 3.7E-05 31.1 2.4 26 30-55 228-253 (256)
159 cd06632 STKc_MEKK1_plant Catal 79.1 1.8 3.9E-05 30.8 2.5 25 30-54 230-254 (258)
160 cd06631 STKc_YSK4 Catalytic do 79.1 1.9 4.1E-05 31.1 2.6 25 30-54 237-261 (265)
161 cd07866 STKc_BUR1 Catalytic do 79.0 1.8 3.9E-05 31.9 2.5 26 29-54 282-307 (311)
162 cd06627 STKc_Cdc7_like Catalyt 79.0 1.6 3.5E-05 30.9 2.2 26 29-54 225-250 (254)
163 cd07852 STKc_MAPK15 Catalytic 78.3 2 4.4E-05 32.4 2.7 25 30-54 270-294 (337)
164 cd07843 STKc_CDC2L1 Catalytic 78.0 2.1 4.5E-05 31.5 2.6 25 30-54 265-289 (293)
165 cd08215 STKc_Nek Catalytic dom 77.7 2.1 4.6E-05 30.2 2.5 26 29-54 229-254 (258)
166 cd07864 STKc_CDK12 Catalytic d 77.7 2 4.3E-05 31.6 2.4 26 29-54 273-298 (302)
167 cd07844 STKc_PCTAIRE_like Cata 77.7 1.9 4.1E-05 31.6 2.3 26 29-54 262-287 (291)
168 cd07839 STKc_CDK5 Catalytic do 77.5 2 4.2E-05 31.4 2.3 25 30-54 256-280 (284)
169 cd07859 STKc_TDY_MAPK_plant Ca 77.4 2.1 4.6E-05 32.1 2.5 24 31-54 266-289 (338)
170 cd07837 STKc_CdkB_plant Cataly 77.3 2.1 4.5E-05 31.4 2.4 25 30-54 266-290 (295)
171 cd07874 STKc_JNK3 Catalytic do 77.2 2.2 4.7E-05 32.6 2.5 25 30-54 286-310 (355)
172 cd08222 STKc_Nek11 Catalytic d 77.1 2.5 5.4E-05 30.4 2.7 26 29-54 231-256 (260)
173 cd07865 STKc_CDK9 Catalytic do 76.9 2.1 4.6E-05 31.5 2.4 25 30-54 282-306 (310)
174 cd06607 STKc_TAO Catalytic dom 76.8 2.3 4.9E-05 31.7 2.5 26 30-55 242-267 (307)
175 KOG0194 Protein tyrosine kinas 76.5 3.7 8E-05 33.9 3.8 32 33-64 394-425 (474)
176 cd06651 STKc_MEKK3 Catalytic d 76.4 2.1 4.6E-05 31.0 2.2 23 32-54 238-260 (266)
177 cd06656 STKc_PAK3 Catalytic do 76.1 2.4 5.3E-05 31.5 2.5 24 31-54 245-268 (297)
178 cd07863 STKc_CDK4 Catalytic do 76.0 2.6 5.6E-05 30.8 2.6 25 30-54 260-284 (288)
179 cd06635 STKc_TAO1 Catalytic do 75.9 2.7 5.8E-05 31.5 2.7 28 30-57 252-279 (317)
180 cd07851 STKc_p38 Catalytic dom 75.8 2.4 5.1E-05 32.3 2.4 26 29-54 272-297 (343)
181 cd05583 STKc_MSK_N N-terminal 75.3 1.9 4.2E-05 31.6 1.7 29 30-58 238-266 (288)
182 cd06623 PKc_MAPKK_plant_like C 75.0 3.2 7E-05 29.6 2.8 26 29-54 230-255 (264)
183 cd06614 STKc_PAK Catalytic dom 74.8 2.9 6.4E-05 30.6 2.6 25 30-54 245-269 (286)
184 cd06613 STKc_MAP4K3_like Catal 74.7 2.9 6.4E-05 29.9 2.5 26 29-54 234-259 (262)
185 cd06654 STKc_PAK1 Catalytic do 74.4 3.1 6.8E-05 30.9 2.7 25 30-54 245-269 (296)
186 cd07857 STKc_MPK1 Catalytic do 74.3 3.1 6.6E-05 31.5 2.7 25 30-54 267-291 (332)
187 KOG0192 Tyrosine kinase specif 74.3 5.1 0.00011 31.8 4.0 37 27-63 271-307 (362)
188 cd06645 STKc_MAP4K3 Catalytic 74.3 3 6.6E-05 30.0 2.6 25 30-54 240-264 (267)
189 cd07870 STKc_PFTAIRE2 Catalyti 74.2 3.2 6.9E-05 30.5 2.7 25 30-54 263-287 (291)
190 cd06634 STKc_TAO2 Catalytic do 74.0 3.6 7.9E-05 30.7 3.0 26 30-55 242-267 (308)
191 cd06628 STKc_MAPKKK_Byr2_like 73.4 3.7 8E-05 29.5 2.8 25 30-54 239-263 (267)
192 PHA03209 serine/threonine kina 73.2 2.7 5.9E-05 32.3 2.2 22 33-54 329-350 (357)
193 cd05042 PTKc_Aatyk Catalytic d 72.8 4.3 9.4E-05 29.3 3.1 23 34-57 246-268 (269)
194 cd06643 STKc_SLK Catalytic dom 72.7 3.2 7E-05 30.3 2.4 25 30-54 237-261 (282)
195 cd07848 STKc_CDKL5 Catalytic d 72.7 3.5 7.6E-05 30.1 2.6 25 30-54 259-283 (287)
196 cd06625 STKc_MEKK3_like Cataly 72.5 3.8 8.3E-05 29.3 2.7 25 30-54 235-259 (263)
197 cd07834 STKc_MAPK Catalytic do 72.0 3.8 8.2E-05 30.7 2.7 31 30-60 264-296 (330)
198 cd07850 STKc_JNK Catalytic dom 71.9 3.4 7.3E-05 31.6 2.4 26 29-54 285-310 (353)
199 cd06611 STKc_SLK_like Catalyti 71.9 3.2 7E-05 30.2 2.2 25 30-54 237-261 (280)
200 cd06648 STKc_PAK_II Catalytic 71.9 3.2 7E-05 30.5 2.3 25 30-54 244-268 (285)
201 cd07856 STKc_Sty1_Hog1 Catalyt 71.8 3.6 7.9E-05 31.2 2.6 26 29-54 262-287 (328)
202 cd05579 STKc_MAST_like Catalyt 71.8 2.2 4.9E-05 30.3 1.3 29 29-57 228-256 (265)
203 cd07855 STKc_ERK5 Catalytic do 71.7 3.8 8.2E-05 31.0 2.6 26 29-54 268-293 (334)
204 cd07836 STKc_Pho85 Catalytic d 71.7 3.6 7.8E-05 29.9 2.4 24 31-54 257-280 (284)
205 cd06644 STKc_STK10_LOK Catalyt 71.3 3.9 8.5E-05 30.1 2.6 25 30-54 244-268 (292)
206 PLN00034 mitogen-activated pro 71.2 3.8 8.2E-05 31.3 2.5 25 30-54 303-327 (353)
207 cd07879 STKc_p38delta_MAPK13 C 71.1 3.8 8.2E-05 31.2 2.5 25 30-54 272-296 (342)
208 PTZ00024 cyclin-dependent prot 70.3 4.3 9.3E-05 30.6 2.6 26 29-54 287-312 (335)
209 cd06636 STKc_MAP4K4_6 Catalyti 70.1 3.7 8E-05 29.9 2.2 25 30-54 254-278 (282)
210 cd06622 PKc_MAPKK_PBS2_like Ca 69.8 5 0.00011 29.3 2.8 26 29-54 236-261 (286)
211 cd07873 STKc_PCTAIRE1 Catalyti 69.6 4 8.6E-05 30.2 2.3 24 31-54 262-285 (301)
212 cd06655 STKc_PAK2 Catalytic do 69.3 4.1 8.8E-05 30.3 2.3 24 31-54 245-268 (296)
213 cd07853 STKc_NLK Catalytic dom 69.3 4.1 8.9E-05 31.4 2.4 25 30-54 263-287 (372)
214 cd06633 STKc_TAO3 Catalytic do 68.3 4.1 9E-05 30.5 2.2 25 30-54 248-272 (313)
215 PLN00181 protein SPA1-RELATED; 67.4 4.6 0.0001 34.8 2.5 25 30-54 240-264 (793)
216 cd07867 STKc_CDC2L6 Catalytic 66.9 5.2 0.00011 29.6 2.5 24 31-54 290-313 (317)
217 cd06617 PKc_MKK3_6 Catalytic d 66.8 5.1 0.00011 29.1 2.3 25 30-54 236-260 (283)
218 cd07845 STKc_CDK10 Catalytic d 65.9 5.3 0.00011 29.7 2.3 24 31-54 266-289 (309)
219 cd06630 STKc_MEKK1 Catalytic d 65.6 6 0.00013 28.4 2.5 26 29-54 238-263 (268)
220 cd07876 STKc_JNK2 Catalytic do 65.0 6 0.00013 30.2 2.5 25 30-54 290-314 (359)
221 cd07854 STKc_MAPK4_6 Catalytic 64.7 6.5 0.00014 29.9 2.7 25 30-54 275-299 (342)
222 cd07868 STKc_CDK8 Catalytic do 64.1 6.5 0.00014 29.3 2.5 24 31-54 290-313 (317)
223 cd07869 STKc_PFTAIRE1 Catalyti 63.6 5.9 0.00013 29.4 2.2 25 30-54 263-287 (303)
224 cd06659 STKc_PAK6 Catalytic do 62.6 8.5 0.00018 28.6 2.9 25 31-55 247-271 (297)
225 cd07875 STKc_JNK1 Catalytic do 62.5 7.3 0.00016 29.8 2.6 25 30-54 293-317 (364)
226 cd06647 STKc_PAK_I Catalytic d 62.4 6.7 0.00015 29.0 2.3 26 30-55 244-269 (293)
227 KOG0596 Dual specificity; seri 60.9 5.9 0.00013 33.6 1.9 45 10-54 581-626 (677)
228 PHA02882 putative serine/threo 60.9 9.6 0.00021 28.2 2.9 27 30-56 267-293 (294)
229 PTZ00283 serine/threonine prot 60.5 8.2 0.00018 31.5 2.7 25 30-54 272-296 (496)
230 cd06658 STKc_PAK5 Catalytic do 59.7 8.7 0.00019 28.4 2.5 24 31-54 248-271 (292)
231 cd07880 STKc_p38gamma_MAPK12 C 59.2 7.9 0.00017 29.5 2.3 24 31-54 274-297 (343)
232 cd07878 STKc_p38beta_MAPK11 Ca 57.9 8.7 0.00019 29.1 2.3 24 31-54 274-297 (343)
233 PTZ00284 protein kinase; Provi 57.4 9.2 0.0002 30.6 2.4 25 30-54 413-437 (467)
234 cd05609 STKc_MAST Catalytic do 56.4 7 0.00015 29.0 1.5 29 30-58 245-273 (305)
235 PTZ00267 NIMA-related protein 54.4 11 0.00024 30.4 2.5 25 30-54 298-322 (478)
236 cd05611 STKc_Rim15_like Cataly 54.3 6.5 0.00014 28.2 1.0 29 29-57 222-250 (260)
237 PHA03211 serine/threonine kina 53.9 11 0.00024 30.6 2.4 24 31-54 431-454 (461)
238 cd05581 STKc_PDK1 Catalytic do 53.1 9.7 0.00021 27.3 1.8 21 30-50 248-268 (280)
239 cd05574 STKc_phototropin_like 52.8 12 0.00026 27.8 2.3 30 29-58 259-288 (316)
240 cd06657 STKc_PAK4 Catalytic do 52.4 13 0.00027 27.6 2.4 24 31-54 246-269 (292)
241 cd07872 STKc_PCTAIRE2 Catalyti 51.3 13 0.00028 27.6 2.3 24 31-54 262-285 (309)
242 PHA03212 serine/threonine kina 50.5 13 0.00028 29.2 2.2 25 30-54 351-375 (391)
243 KOG1023 Natriuretic peptide re 46.4 19 0.00041 29.9 2.6 32 30-61 195-226 (484)
244 cd05607 STKc_GRK7 Catalytic do 46.0 10 0.00022 27.7 1.0 27 30-56 225-251 (277)
245 cd05123 STKc_AGC Catalytic dom 45.7 16 0.00034 25.8 1.9 22 30-51 219-240 (250)
246 cd07871 STKc_PCTAIRE3 Catalyti 45.5 21 0.00045 26.2 2.6 24 31-54 261-284 (288)
247 cd07877 STKc_p38alpha_MAPK14 C 43.4 20 0.00043 27.3 2.2 24 31-54 276-299 (345)
248 PTZ00036 glycogen synthase kin 42.0 21 0.00046 28.5 2.3 25 30-54 326-350 (440)
249 KOG0193 Serine/threonine prote 42.0 31 0.00068 29.7 3.3 35 27-61 621-655 (678)
250 KOG1026 Nerve growth factor re 40.5 39 0.00085 29.7 3.7 36 27-62 730-765 (774)
251 KOG1095 Protein tyrosine kinas 40.4 42 0.00091 30.5 4.0 36 27-62 929-964 (1025)
252 KOG0195 Integrin-linked kinase 40.1 21 0.00046 28.1 1.9 30 30-59 417-446 (448)
253 KOG0199 ACK and related non-re 39.6 41 0.00088 29.9 3.6 32 25-56 338-369 (1039)
254 cd05632 STKc_GRK5 Catalytic do 39.5 22 0.00048 26.0 1.9 23 30-52 231-253 (285)
255 cd05610 STKc_MASTL Catalytic d 39.2 24 0.00052 30.0 2.3 25 31-55 610-634 (669)
256 cd05572 STKc_cGK_PKG Catalytic 36.7 30 0.00065 24.7 2.2 23 29-51 221-243 (262)
257 PHA03207 serine/threonine kina 36.5 29 0.00063 27.0 2.3 23 33-55 353-375 (392)
258 cd05605 STKc_GRK4_like Catalyt 36.4 23 0.0005 25.9 1.6 22 29-50 230-251 (285)
259 KOG0196 Tyrosine kinase, EPH ( 35.4 13 0.00028 33.0 0.1 40 24-63 856-895 (996)
260 cd05631 STKc_GRK4 Catalytic do 35.4 25 0.00053 25.8 1.6 25 30-54 231-260 (285)
261 PLN03225 Serine/threonine-prot 32.0 39 0.00085 28.3 2.4 22 33-54 428-449 (566)
262 KOG0579 Ste20-like serine/thre 31.7 48 0.001 29.3 2.8 22 33-54 267-288 (1187)
263 cd05600 STKc_Sid2p_Dbf2p Catal 31.6 43 0.00092 25.2 2.4 26 30-55 232-257 (333)
264 cd05608 STKc_GRK1 Catalytic do 30.2 39 0.00084 24.6 1.9 20 30-49 227-246 (280)
265 cd05570 STKc_PKC Catalytic dom 29.8 33 0.00072 25.7 1.5 25 30-54 222-251 (318)
266 cd05630 STKc_GRK6 Catalytic do 28.9 34 0.00073 25.1 1.4 25 30-54 231-260 (285)
267 cd05585 STKc_YPK1_like Catalyt 27.7 26 0.00056 26.1 0.6 26 31-56 220-245 (312)
268 cd05601 STKc_CRIK Catalytic do 26.0 1.4E+02 0.003 22.3 4.4 22 32-54 241-262 (330)
269 KOG0200 Fibroblast/platelet-de 25.8 97 0.0021 26.2 3.7 34 26-59 546-579 (609)
270 PF00440 TetR_N: Bacterial reg 25.7 47 0.001 17.8 1.3 30 31-60 1-30 (47)
271 cd05578 STKc_Yank1 Catalytic d 24.9 51 0.0011 23.4 1.7 22 29-50 227-248 (258)
272 PHA03052 Hypothetical protein; 24.3 58 0.0013 19.8 1.6 14 106-119 10-23 (69)
273 PHA03210 serine/threonine kina 24.2 73 0.0016 26.0 2.7 22 33-54 432-453 (501)
274 cd05618 STKc_aPKC_iota Catalyt 23.9 57 0.0012 24.6 1.9 19 30-48 231-249 (329)
275 KOG0197 Tyrosine kinases [Sign 23.2 1.3E+02 0.0029 24.9 4.0 33 29-61 431-463 (468)
276 KOG4278 Protein tyrosine kinas 23.1 44 0.00095 29.4 1.2 35 25-59 489-523 (1157)
277 cd05582 STKc_RSK_N N-terminal 23.1 66 0.0014 23.9 2.1 21 31-51 225-245 (318)
278 KOG1420 Ca2+-activated K+ chan 22.1 61 0.0013 28.1 1.8 22 95-116 22-43 (1103)
279 cd05592 STKc_nPKC_theta_delta 22.0 65 0.0014 24.1 1.9 23 31-53 223-245 (316)
280 cd05633 STKc_GRK3 Catalytic do 21.1 66 0.0014 23.4 1.7 25 30-54 225-254 (279)
281 cd06652 STKc_MEKK2 Catalytic d 21.0 91 0.002 22.2 2.4 20 34-54 241-260 (265)
282 KOG0198 MEKK and related serin 20.5 62 0.0013 25.3 1.5 22 34-55 255-276 (313)
283 cd05577 STKc_GRK Catalytic dom 20.4 52 0.0011 23.8 1.0 26 31-56 225-251 (277)
284 PF12091 DUF3567: Protein of u 20.3 2.2E+02 0.0048 18.0 3.7 50 12-64 29-79 (85)
285 PRK13184 pknD serine/threonine 20.3 96 0.0021 28.0 2.7 31 30-60 260-291 (932)
286 cd05571 STKc_PKB Catalytic dom 20.2 75 0.0016 23.8 1.9 25 30-54 221-250 (323)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.74 E-value=1.3e-08 Score=79.90 Aligned_cols=60 Identities=33% Similarity=0.429 Sum_probs=52.3
Q ss_pred ChhhhhhcCCccceeccccc-ccccH-HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 1 VFLKVINENRLFEVLDAQVL-REAEK-EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 1 ~~~~~~~~~~~~eilD~~l~-~~~~~-e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
|++..+.++++.+++|++|. +.+.. +++.+++.+|++|++.++.+||+|.+|+.+|+.+.
T Consensus 292 w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 292 WAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 56778888899999999997 55554 79999999999999999999999999999996554
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.25 E-value=0.00042 Score=59.99 Aligned_cols=52 Identities=13% Similarity=0.207 Sum_probs=41.7
Q ss_pred Cccceeccccccc--ccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 10 RLFEVLDAQVLRE--AEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 10 ~~~eilD~~l~~~--~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
....++|+.+... ...+++..+.+++.+|++.+|.+||+|.+|++.|+.+..
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 900 HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 3455677776432 345778889999999999999999999999999988754
No 3
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=95.92 E-value=0.008 Score=43.95 Aligned_cols=31 Identities=6% Similarity=0.153 Sum_probs=28.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||+|.+++.+|+.+
T Consensus 253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 4677899999999999999999999999876
No 4
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=95.34 E-value=0.019 Score=42.28 Aligned_cols=31 Identities=23% Similarity=0.411 Sum_probs=27.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|++||++.+++..|+.+
T Consensus 253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 253 AEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 3577888999999999999999999999865
No 5
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=95.24 E-value=0.024 Score=42.01 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=30.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+..+|++.+|.+||++.+|.++|+.+.+.
T Consensus 252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 3567899999999999999999999999988653
No 6
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=95.16 E-value=0.027 Score=40.96 Aligned_cols=31 Identities=6% Similarity=0.161 Sum_probs=27.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||+|.+|...|+.+
T Consensus 237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 4567899999999999999999999999764
No 7
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=95.15 E-value=0.027 Score=41.71 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=28.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
..+..+...|++.+|.+||++.+++..|+.+-.
T Consensus 256 ~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 256 EEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 356788899999999999999999999987643
No 8
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=95.05 E-value=0.029 Score=41.42 Aligned_cols=32 Identities=13% Similarity=0.185 Sum_probs=28.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
..+..+...|++.+|.+||++.+++..|+.+.
T Consensus 261 ~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 261 QELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 46778999999999999999999999998763
No 9
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=95.04 E-value=0.028 Score=40.66 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=27.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||++.++.+.|+.+
T Consensus 231 ~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 231 QEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 4567888999999999999999999999753
No 10
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=95.02 E-value=0.03 Score=40.77 Aligned_cols=31 Identities=10% Similarity=0.197 Sum_probs=27.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+.++..+|++.+|.+||++.++...|+.+
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 4567889999999999999999999999764
No 11
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=95.01 E-value=0.032 Score=40.59 Aligned_cols=31 Identities=10% Similarity=0.214 Sum_probs=26.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||++.++.++|+.+
T Consensus 232 ~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 232 PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 3566788899999999999999999998764
No 12
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=94.86 E-value=0.03 Score=40.63 Aligned_cols=30 Identities=10% Similarity=0.209 Sum_probs=27.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|.+||+|.++...|+.
T Consensus 231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 231 KELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 567788899999999999999999999875
No 13
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=94.84 E-value=0.033 Score=41.03 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=28.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
..+..+...|++.+|.+||+|.+++..|+.+.
T Consensus 251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 251 QEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 46788999999999999999999999998753
No 14
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=94.80 E-value=0.031 Score=41.57 Aligned_cols=29 Identities=17% Similarity=0.207 Sum_probs=26.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+.++..+|++.+|.+||+|.+|++.|+
T Consensus 266 ~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 266 SPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 35778999999999999999999999885
No 15
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=94.72 E-value=0.032 Score=41.19 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=26.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+.++...|++.+|.+||++.++...|+
T Consensus 267 ~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 267 KDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 46788999999999999999999998875
No 16
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=94.65 E-value=0.032 Score=40.24 Aligned_cols=28 Identities=7% Similarity=0.176 Sum_probs=25.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+..+|++.+|.+||++.+|++.|
T Consensus 228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 228 QSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 4577899999999999999999999876
No 17
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=94.64 E-value=0.041 Score=40.74 Aligned_cols=34 Identities=9% Similarity=0.025 Sum_probs=30.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+..+|++.+|.+||++.+|...|+.+.+.
T Consensus 249 ~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 249 KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 3578899999999999999999999999988654
No 18
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=94.63 E-value=0.041 Score=39.86 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|+..+|++||++.++...|+.
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 231 DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 356778899999999999999999999875
No 19
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=94.56 E-value=0.044 Score=39.76 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=27.8
Q ss_pred HHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 28 VITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
...+..+..+|++.+|.+||++.++...|+.+
T Consensus 241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 241 LDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 34677888899999999999999999998764
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=94.53 E-value=0.039 Score=41.90 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=27.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
.+..|...|++.+|.+||++.++++.|+.+.
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 4678899999999999999999999998764
No 21
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=94.51 E-value=0.043 Score=40.25 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=26.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..|...|++.+|.+||++.++...|+.
T Consensus 253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 253 ARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 467788899999999999999999999875
No 22
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=94.42 E-value=0.048 Score=40.22 Aligned_cols=30 Identities=7% Similarity=0.091 Sum_probs=26.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|.+||++.+++..|++
T Consensus 259 ~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 259 LELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 467789999999999999999999998863
No 23
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=94.36 E-value=0.052 Score=39.27 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=28.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
..+..+...|++.+|.+||++.+++..|+.+.
T Consensus 229 ~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 229 DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 35678899999999999999999999998764
No 24
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=94.35 E-value=0.047 Score=39.74 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=24.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
.+..+..+|++.+|.+||+|.+|+.++.
T Consensus 241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 241 DVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 4566777999999999999999999875
No 25
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=94.31 E-value=0.058 Score=39.24 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=27.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||++.++...|+.+
T Consensus 241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 241 DGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 4567888999999999999999999998753
No 26
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=94.30 E-value=0.05 Score=39.36 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=27.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|+..+|.+||++.++...|+.+
T Consensus 225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 225 QEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 4567889999999999999999999999875
No 27
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=94.25 E-value=0.049 Score=39.32 Aligned_cols=31 Identities=32% Similarity=0.352 Sum_probs=26.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|+..+|.+||++.++..+|+.+
T Consensus 226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 226 PEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 4566788899999999999999999998753
No 28
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=94.23 E-value=0.045 Score=40.05 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=21.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+...|+..+|.+||+|.++.+.|
T Consensus 232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 232 KDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 3466788999999999999999999876
No 29
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=94.20 E-value=0.059 Score=39.52 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=28.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
.+..+..+|++.+|++||++.+++..|..+.+
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 247 ELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 46788899999999999999999999987753
No 30
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=94.20 E-value=0.053 Score=39.24 Aligned_cols=28 Identities=18% Similarity=0.209 Sum_probs=25.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+..+|++.+|.+||+|.+++..|
T Consensus 228 ~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 228 MTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 3567899999999999999999999876
No 31
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=94.17 E-value=0.056 Score=39.35 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=28.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+.++..+|++.+|.+||++.++...|+.+
T Consensus 242 ~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 242 EDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 5678899999999999999999999999865
No 32
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=94.16 E-value=0.051 Score=41.71 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=28.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
..+..+..+|++.+|.+||++.++++.|+.+.
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 45778899999999999999999999998764
No 33
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=94.11 E-value=0.059 Score=39.42 Aligned_cols=31 Identities=6% Similarity=0.161 Sum_probs=27.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||++.+++..|..+
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 238 DEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 3567899999999999999999999999865
No 34
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=94.09 E-value=0.06 Score=39.98 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=26.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+.++..+|++.+|.+||+|.++.+.|+
T Consensus 267 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 267 DSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 46678999999999999999999999885
No 35
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=94.09 E-value=0.082 Score=39.00 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=28.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
.+..+..+|+..+|..||++.+++..|..+...
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 456677899999999999999999999886644
No 36
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=94.07 E-value=0.068 Score=39.39 Aligned_cols=31 Identities=10% Similarity=0.202 Sum_probs=27.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+..+|++.+|.+||++.+++..|+.+
T Consensus 253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 4677899999999999999999999998764
No 37
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=94.05 E-value=0.072 Score=39.72 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=29.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+..+|++.+|.+||+|.+++..|+.+...
T Consensus 266 ~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 266 NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 4566788899999999999999999999887643
No 38
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=93.99 E-value=0.071 Score=39.70 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=31.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhccc
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGAS 66 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~~~ 66 (121)
..+..+..+|++.+|.+||++.+++..|..+....+..
T Consensus 245 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~ 282 (297)
T cd05089 245 DEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAY 282 (297)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccc
Confidence 34667889999999999999999999998877655443
No 39
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=93.97 E-value=0.06 Score=38.76 Aligned_cols=29 Identities=17% Similarity=0.270 Sum_probs=25.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.++.++|+
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 45677889999999999999999999885
No 40
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=93.85 E-value=0.082 Score=39.53 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=29.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+...|+..+|.+||+|.+|+..|..+...
T Consensus 269 ~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 269 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 4566788899999999999999999999987654
No 41
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=93.84 E-value=0.078 Score=38.65 Aligned_cols=30 Identities=7% Similarity=0.199 Sum_probs=26.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+..+..+|++.+|.+||+|.++++.|+.+
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 557788899999999999999999998764
No 42
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=93.81 E-value=0.082 Score=38.34 Aligned_cols=32 Identities=6% Similarity=0.051 Sum_probs=27.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
..+..+..+|++.+|.+||++.+|.+.|+.++
T Consensus 235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 44667788999999999999999999998754
No 43
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=93.74 E-value=0.094 Score=38.02 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=25.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+..+..+|++.+|.+||+|.+|.+.++.+
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 456677899999999999999999888764
No 44
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=93.74 E-value=0.062 Score=41.88 Aligned_cols=29 Identities=17% Similarity=0.252 Sum_probs=26.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
.+..|...|++.+|.+||++.++++.|+.
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 46678899999999999999999999875
No 45
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=93.64 E-value=0.071 Score=38.63 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=25.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+..+|+..+|++||+|.+++..|
T Consensus 228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 4578899999999999999999999876
No 46
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=93.61 E-value=0.078 Score=39.52 Aligned_cols=29 Identities=7% Similarity=0.156 Sum_probs=25.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+.++..+|++.+|.+||+|.++...|+
T Consensus 275 ~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 275 QGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 35678889999999999999999998875
No 47
>PHA02988 hypothetical protein; Provisional
Probab=93.60 E-value=0.1 Score=38.92 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=26.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
.+..+..+|++.+|.+||++.+++..|+.+.
T Consensus 250 ~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 250 EIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 4567788999999999999999999987654
No 48
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=93.59 E-value=0.085 Score=38.43 Aligned_cols=30 Identities=7% Similarity=0.181 Sum_probs=26.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+..+...|++.+|.+||+|.++...|+.+
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 239 ALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 467788999999999999999999988754
No 49
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=93.58 E-value=0.084 Score=38.75 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=25.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
.+..+...|++.+|.+||++.++...|+
T Consensus 254 ~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 254 WVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 4667889999999999999999999886
No 50
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=93.44 E-value=0.081 Score=38.24 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=26.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+..+..+|++.+|.+||++.++...|+.+
T Consensus 227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 227 VVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 456788899999999999999999988753
No 51
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=93.42 E-value=0.078 Score=38.88 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=25.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.+++..|+
T Consensus 248 ~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 248 DMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 35677899999999999999999998875
No 52
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=93.42 E-value=0.093 Score=37.67 Aligned_cols=29 Identities=24% Similarity=0.342 Sum_probs=26.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+...|++.+|.+||++.++.+.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 56778999999999999999999998874
No 53
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=93.33 E-value=0.11 Score=37.41 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=27.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
.+..+...|+..+|.+||++.+++.+|+.+.
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 5667888999999999999999999998763
No 54
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=93.24 E-value=0.066 Score=38.90 Aligned_cols=28 Identities=11% Similarity=0.326 Sum_probs=24.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+...|++.+|.+||++.++++.|
T Consensus 230 ~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 230 TELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 3467788899999999999999999876
No 55
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=93.23 E-value=0.24 Score=37.55 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=29.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+...|++.+|.+||+|.+++..|+.+...
T Consensus 263 ~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 263 HELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 4567888999999999999999999999887643
No 56
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=93.18 E-value=0.093 Score=40.18 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=27.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
.+.++...|++.+|.+||++.+++..|+.+.
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 4678889999999999999999999998764
No 57
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=93.08 E-value=0.14 Score=38.45 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=28.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
.+..+..+|++.+|.+||++.++...|..+..
T Consensus 264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 264 ELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 56678899999999999999999999988754
No 58
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=93.01 E-value=0.12 Score=37.73 Aligned_cols=31 Identities=6% Similarity=0.095 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+.++...|++.+|.+||++.++.+.|.++
T Consensus 235 ~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 235 NLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 3566788899999999999999999988653
No 59
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=92.86 E-value=0.14 Score=38.41 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|++||++.+++..|+.
T Consensus 271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 356778899999999999999999999875
No 60
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=92.85 E-value=0.13 Score=37.19 Aligned_cols=30 Identities=13% Similarity=0.193 Sum_probs=26.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|+..+|.+||++.++...|+.
T Consensus 230 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 230 ISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 457788999999999999999999988864
No 61
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=92.75 E-value=0.14 Score=37.34 Aligned_cols=29 Identities=7% Similarity=0.079 Sum_probs=25.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+...|++.+|.+||++.+|...|+
T Consensus 251 ~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 251 SEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 45677889999999999999999999885
No 62
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=92.73 E-value=0.12 Score=40.22 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=26.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+..+..+|++.+|.+||++.+++++|+.+
T Consensus 343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 456777899999999999999999999875
No 63
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=92.73 E-value=0.16 Score=36.91 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=25.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|.+||++.++.+.|+.
T Consensus 230 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 230 ESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 345667789999999999999999998864
No 64
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=92.71 E-value=0.16 Score=36.88 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=25.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
.+..+..+|++.+|.+||++.++...|+
T Consensus 241 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 241 KIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 4567888999999999999999999885
No 65
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=92.64 E-value=0.17 Score=36.80 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=27.7
Q ss_pred HHHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 28 VITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
-..+.++..+|++.+|.+||++.++...|+.
T Consensus 229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 229 PESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 3567789999999999999999999999875
No 66
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=92.57 E-value=0.16 Score=36.84 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=26.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|++||++.++...|+.
T Consensus 230 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 230 EELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 356678889999999999999999999874
No 67
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=92.56 E-value=0.15 Score=37.00 Aligned_cols=30 Identities=10% Similarity=0.092 Sum_probs=26.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|++||++.++...|+.
T Consensus 230 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 230 EELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 357778889999999999999999998864
No 68
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=92.55 E-value=0.13 Score=37.35 Aligned_cols=29 Identities=7% Similarity=0.184 Sum_probs=24.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.+++..|+
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 45677888999999999999999988763
No 69
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=92.47 E-value=0.16 Score=37.29 Aligned_cols=29 Identities=3% Similarity=0.082 Sum_probs=25.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.+|++.|+
T Consensus 248 ~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 248 GPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 35667889999999999999999998875
No 70
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=92.47 E-value=0.12 Score=38.06 Aligned_cols=27 Identities=15% Similarity=0.399 Sum_probs=24.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
.+..+...|++.+|.+||++.+++..|
T Consensus 247 ~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 247 ELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 467788999999999999999999876
No 71
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=92.41 E-value=0.13 Score=37.39 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=26.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+...|++.+|.+||++.++...|+
T Consensus 248 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 248 DKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 46678999999999999999999998875
No 72
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=92.35 E-value=0.17 Score=37.92 Aligned_cols=35 Identities=6% Similarity=0.127 Sum_probs=29.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG 64 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~ 64 (121)
.+..+..+|++.+|.+||++.+++..|..+.....
T Consensus 251 ~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 251 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 46678899999999999999999999987754433
No 73
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=92.26 E-value=0.15 Score=36.80 Aligned_cols=29 Identities=14% Similarity=0.269 Sum_probs=25.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.+++..|+
T Consensus 224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 224 ADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 34567888999999999999999999875
No 74
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=92.22 E-value=0.14 Score=36.70 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=25.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.++...|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 35777888999999999999999998875
No 75
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=92.21 E-value=0.17 Score=38.11 Aligned_cols=34 Identities=15% Similarity=0.411 Sum_probs=29.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+...|++.+|.+||++.+++..|..+...
T Consensus 238 ~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 3567788999999999999999999998877543
No 76
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=92.20 E-value=0.15 Score=37.66 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=27.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+...|++.+|.+||+|.++++.|+..
T Consensus 248 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 248 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 4577888999999999999999999888764
No 77
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=92.11 E-value=0.18 Score=37.62 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=29.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
..+..+...|+..+|++||+|.+++..|..+...
T Consensus 238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3567788999999999999999999999876543
No 78
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=92.07 E-value=0.18 Score=36.56 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=25.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
.+..+-..|++.+|.+||+|.+|...|+.
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 45578889999999999999999999875
No 79
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=91.94 E-value=0.19 Score=36.23 Aligned_cols=29 Identities=21% Similarity=0.108 Sum_probs=25.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.++...|.
T Consensus 228 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 228 QDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 45677888999999999999999998874
No 80
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=91.68 E-value=0.19 Score=39.94 Aligned_cols=31 Identities=6% Similarity=0.118 Sum_probs=27.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+..+...|++.+|..||++++++..|+.+
T Consensus 369 ~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 369 DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 3566788899999999999999999999865
No 81
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=91.60 E-value=0.24 Score=36.08 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=27.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
.+..+..+|+..+|.+||++.++...|+.+..
T Consensus 236 ~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 236 TLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 56667789999999999999999999988754
No 82
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=91.47 E-value=0.25 Score=35.66 Aligned_cols=30 Identities=10% Similarity=0.090 Sum_probs=26.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+..+|++.+|.+||++.++...|+.
T Consensus 231 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 231 EELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 356778899999999999999999988864
No 83
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=91.36 E-value=0.2 Score=39.77 Aligned_cols=32 Identities=9% Similarity=0.132 Sum_probs=28.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
..+..+...|++.+|.+||++.++++.|+.+.
T Consensus 367 ~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 367 QEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 35678889999999999999999999998753
No 84
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=91.34 E-value=0.2 Score=35.73 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=25.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+...|++.+|.+||++.++...|+
T Consensus 234 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 234 DELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 45677888999999999999999998763
No 85
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=91.23 E-value=0.28 Score=35.92 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI 63 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~ 63 (121)
..+..+...|++.+|..||++.++...|..+...+
T Consensus 238 ~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 34567888999999999999999999887765443
No 86
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=91.10 E-value=0.18 Score=36.81 Aligned_cols=28 Identities=11% Similarity=0.319 Sum_probs=24.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..|...|++.+|.+||++.+++..|
T Consensus 234 ~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 234 KELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 3466788899999999999999998765
No 87
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=91.05 E-value=0.24 Score=36.48 Aligned_cols=29 Identities=7% Similarity=0.131 Sum_probs=25.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||++.++...|+
T Consensus 251 ~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 251 PEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 34667889999999999999999998885
No 88
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=91.04 E-value=0.28 Score=35.99 Aligned_cols=29 Identities=10% Similarity=0.224 Sum_probs=24.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
.+..+...|++.+|.+||++.++.+.|..
T Consensus 254 ~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 254 RMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 45667789999999999999999988753
No 89
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=90.93 E-value=0.21 Score=35.90 Aligned_cols=28 Identities=14% Similarity=0.345 Sum_probs=25.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+...|+..+|.+||++.++++.|
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 5677888999999999999999999876
No 90
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=90.93 E-value=0.28 Score=35.66 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=26.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..+.++-.+|.+.++++||++.+|.+.|+.+
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 4556788899999999999999999988754
No 91
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=90.67 E-value=0.36 Score=32.90 Aligned_cols=31 Identities=3% Similarity=-0.057 Sum_probs=27.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
.+..+..+|++.+|.+||++.+++..+..+.
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 4788899999999999999999998876653
No 92
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=89.92 E-value=0.32 Score=34.80 Aligned_cols=26 Identities=27% Similarity=0.395 Sum_probs=22.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+|++
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhh
Confidence 45677888999999999999999875
No 93
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=89.37 E-value=0.33 Score=34.64 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=23.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
..+..+..+|+..+|.+||++.++...|
T Consensus 231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 231 PEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 3566788899999999999999988754
No 94
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=88.81 E-value=0.5 Score=34.36 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=25.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+..+|++.+|.+||+..+++..|.
T Consensus 246 ~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 246 SRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 35678999999999999999999998875
No 95
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=88.22 E-value=0.43 Score=34.87 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=22.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||+|.+++.
T Consensus 257 ~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 257 GLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHHHhcCCcccchhHHHHhc
Confidence 34677899999999999999998864
No 96
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=88.22 E-value=0.44 Score=34.21 Aligned_cols=25 Identities=8% Similarity=0.278 Sum_probs=22.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||+|++|+.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 228 DLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 4667788999999999999999986
No 97
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=88.14 E-value=0.52 Score=33.70 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=22.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|++||+|.++++
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 227 QQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhh
Confidence 35677888999999999999999875
No 98
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=88.02 E-value=0.4 Score=35.02 Aligned_cols=25 Identities=12% Similarity=-0.012 Sum_probs=21.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||+|.++..
T Consensus 255 ~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 255 DGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4667889999999999999999874
No 99
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=87.97 E-value=0.55 Score=32.76 Aligned_cols=26 Identities=15% Similarity=0.083 Sum_probs=23.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|+..+|.+||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 46778999999999999999999985
No 100
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=87.62 E-value=0.78 Score=33.55 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=28.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
.+..+...|+..+|..||++.++...|..+...
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 456778899999999999999999999887543
No 101
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=87.56 E-value=0.62 Score=34.06 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=23.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||+|.+++.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHH
Confidence 45677889999999999999999987
No 102
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=86.87 E-value=0.72 Score=33.99 Aligned_cols=26 Identities=15% Similarity=0.123 Sum_probs=22.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+-..|++.+|.+||+|.+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 240 EEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 35677889999999999999999887
No 103
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=86.83 E-value=0.64 Score=33.75 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=23.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..++.+...|++.+|.+||++.+++.
T Consensus 258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 258 PSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 45678999999999999999999875
No 104
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=86.57 E-value=0.5 Score=34.49 Aligned_cols=26 Identities=19% Similarity=0.121 Sum_probs=22.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|+..+|.+||++.+++.
T Consensus 259 ~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 259 SPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred hHHHHHHHHHhccCchhcccHHHHhc
Confidence 45678889999999999999998864
No 105
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=86.25 E-value=0.8 Score=33.37 Aligned_cols=26 Identities=23% Similarity=0.207 Sum_probs=22.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++++++.
T Consensus 254 ~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 254 PEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHHHhcccCcccCCCHHHHhh
Confidence 45778899999999999999999864
No 106
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=86.22 E-value=0.66 Score=34.08 Aligned_cols=30 Identities=10% Similarity=0.004 Sum_probs=24.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+...|++.+|.+||++.++......
T Consensus 240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 240 EDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 356678889999999999999999886433
No 107
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=86.18 E-value=0.68 Score=33.16 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=22.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 228 ~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 228 PELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHhc
Confidence 35677889999999999999999874
No 108
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=86.14 E-value=0.6 Score=33.39 Aligned_cols=25 Identities=12% Similarity=0.181 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 228 ~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 228 EFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHHHHhcChhhCcCHHHHhc
Confidence 4566778999999999999999875
No 109
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=86.02 E-value=0.82 Score=33.16 Aligned_cols=25 Identities=8% Similarity=0.092 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||++.+++.
T Consensus 240 ~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 240 EAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHh
Confidence 4567788999999999999999875
No 110
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=85.83 E-value=0.82 Score=32.31 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=21.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.+++.
T Consensus 231 ~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 231 EEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 34666778999999999999999874
No 111
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=85.56 E-value=0.93 Score=33.15 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=22.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+...|++.+|.+||++.+++..
T Consensus 258 ~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 258 EFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhc
Confidence 46677889999999999999998764
No 112
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=85.49 E-value=0.72 Score=32.97 Aligned_cols=25 Identities=20% Similarity=0.390 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.+++.
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhh
Confidence 4567788999999999999999875
No 113
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=85.32 E-value=1.4 Score=33.34 Aligned_cols=28 Identities=11% Similarity=0.100 Sum_probs=24.3
Q ss_pred HHHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 27 EVITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.-..+..+..+|++.+|.+||++.++++
T Consensus 280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 280 FSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 4456788999999999999999999975
No 114
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=84.88 E-value=0.92 Score=32.96 Aligned_cols=26 Identities=15% Similarity=0.056 Sum_probs=22.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.+++.
T Consensus 253 ~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 253 AEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHHhccCcccccCHHHHhh
Confidence 56677889999999999999998864
No 115
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=84.83 E-value=1.1 Score=32.73 Aligned_cols=24 Identities=29% Similarity=0.205 Sum_probs=19.0
Q ss_pred HHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
++-..|. .+|.+||++.++++.|.
T Consensus 244 ~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 244 EVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3445687 57999999999998873
No 116
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=84.03 E-value=0.96 Score=32.33 Aligned_cols=25 Identities=4% Similarity=0.301 Sum_probs=20.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|++||++.+++.
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 229 DLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhh
Confidence 3556667899999999999999875
No 117
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=84.01 E-value=1.1 Score=32.42 Aligned_cols=26 Identities=12% Similarity=0.056 Sum_probs=22.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 254 ~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 254 PQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHHHhccCcccCcCHHHHhh
Confidence 45678899999999999999999874
No 118
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=83.77 E-value=0.86 Score=33.22 Aligned_cols=24 Identities=13% Similarity=0.004 Sum_probs=20.5
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|.+||++.++..
T Consensus 258 ~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 258 GLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHHHHHhcCChhhCCCHHHHhc
Confidence 346778999999999999998864
No 119
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=83.77 E-value=0.99 Score=32.24 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=22.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+.++-..|++.+|.+||++.++++
T Consensus 231 ~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 231 EELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 56778888999999999999999874
No 120
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=83.75 E-value=0.92 Score=31.91 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=21.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.++..
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 34667778999999999999999864
No 121
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=83.54 E-value=0.9 Score=34.00 Aligned_cols=26 Identities=19% Similarity=0.268 Sum_probs=22.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+..+|++.+|++||++.++...
T Consensus 262 ~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 262 EFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 36678889999999999999998764
No 122
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=83.41 E-value=1.1 Score=32.93 Aligned_cols=26 Identities=23% Similarity=0.166 Sum_probs=22.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+.++...|++.+|.+||++.+++.
T Consensus 256 ~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 256 DDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 45667888999999999999999987
No 123
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=83.34 E-value=1.2 Score=32.47 Aligned_cols=28 Identities=21% Similarity=0.154 Sum_probs=23.8
Q ss_pred HHHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 28 VITIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
-..+..+...|++.+|.+||++.+++..
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 3457788899999999999999999653
No 124
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=83.25 E-value=1 Score=32.39 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=21.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|+..+|.+||++.+++.
T Consensus 247 ~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 247 KFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhc
Confidence 4567788999999999999999875
No 125
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=83.10 E-value=1.1 Score=33.98 Aligned_cols=25 Identities=12% Similarity=0.108 Sum_probs=22.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|++||++.+++.
T Consensus 276 ~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 276 DFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 4567888999999999999999976
No 126
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=83.05 E-value=0.87 Score=34.38 Aligned_cols=25 Identities=12% Similarity=0.178 Sum_probs=22.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||++.+++.
T Consensus 282 ~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 282 HFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred HHHHHHHHHHhhCchhcCCHHHHhc
Confidence 5667889999999999999999976
No 127
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=82.78 E-value=1.1 Score=33.25 Aligned_cols=26 Identities=8% Similarity=0.111 Sum_probs=22.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 269 ~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 269 EHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 35667888999999999999999876
No 128
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=82.77 E-value=0.77 Score=33.22 Aligned_cols=27 Identities=30% Similarity=0.250 Sum_probs=22.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
..+..+..+|++.+|.+||++.+++..
T Consensus 239 ~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 239 STFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 355677789999999999999998753
No 129
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=82.72 E-value=1 Score=30.31 Aligned_cols=27 Identities=19% Similarity=0.317 Sum_probs=24.1
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
..+.++...|++.+|.+||++.+++..
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 678889999999999999999998753
No 130
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=82.71 E-value=1 Score=33.11 Aligned_cols=26 Identities=8% Similarity=0.069 Sum_probs=22.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.++..
T Consensus 261 ~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 261 RSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 34667889999999999999999864
No 131
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=82.67 E-value=1.2 Score=32.44 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=21.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 258 ~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 258 PALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHHHHHHhcCCccccCCHHHHhc
Confidence 4567888999999999999998864
No 132
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=82.53 E-value=1.3 Score=31.76 Aligned_cols=26 Identities=12% Similarity=0.273 Sum_probs=21.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+-.+|++.+|.+||++.+++..
T Consensus 227 ~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 227 ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 34567779999999999999998753
No 133
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=82.52 E-value=1.2 Score=32.33 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=21.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|+..+|++||++.+++.
T Consensus 226 ~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 226 PFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 4566778899999999999999976
No 134
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=81.99 E-value=1.4 Score=31.85 Aligned_cols=25 Identities=16% Similarity=0.198 Sum_probs=21.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 244 ~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 244 KFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhh
Confidence 4566778999999999999998864
No 135
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=81.94 E-value=1.3 Score=32.26 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=20.4
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|.+||++.+++.
T Consensus 257 ~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 257 GRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHHhcCCCcccCCCHHHHhc
Confidence 345778999999999999999874
No 136
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=81.79 E-value=1.5 Score=31.86 Aligned_cols=26 Identities=19% Similarity=0.049 Sum_probs=21.8
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.+++.
T Consensus 258 ~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 258 EEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHHHHHHhccCCccCCCHHHHhc
Confidence 34567888999999999999999864
No 137
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=81.76 E-value=1.4 Score=31.52 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=21.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 238 KSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 34567888999999999999999874
No 138
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=81.58 E-value=1.3 Score=32.73 Aligned_cols=26 Identities=15% Similarity=0.050 Sum_probs=22.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|++||++.+++.
T Consensus 287 ~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 287 SQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 34677888999999999999999874
No 139
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=81.57 E-value=1.4 Score=31.95 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=21.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+-..|++.+|.+||+|.+|+.
T Consensus 243 ~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 243 PVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 34566778999999999999999875
No 140
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=81.30 E-value=1.6 Score=31.87 Aligned_cols=26 Identities=23% Similarity=0.233 Sum_probs=22.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+..+|++.+|.+||++.+++..
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 228 PLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhC
Confidence 45677889999999999999999873
No 141
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=81.13 E-value=1.2 Score=32.62 Aligned_cols=25 Identities=8% Similarity=0.146 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.++..
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhc
Confidence 3566777899999999999999875
No 142
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=81.11 E-value=1.4 Score=32.32 Aligned_cols=26 Identities=19% Similarity=0.149 Sum_probs=22.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.++..
T Consensus 241 ~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 241 PSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 35677888999999999999999876
No 143
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=80.77 E-value=1.6 Score=31.72 Aligned_cols=26 Identities=15% Similarity=-0.001 Sum_probs=22.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 256 ~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 256 PEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 56677889999999999999999875
No 144
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=80.74 E-value=1.4 Score=32.52 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=22.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
..+..+..+|++.+|.+||++.+++..
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 346677789999999999999998763
No 145
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=80.58 E-value=1.8 Score=32.99 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=21.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.++..
T Consensus 274 ~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 274 EFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred HHHHHHHHhccCCcccCcCHHHHhh
Confidence 3567889999999999999999864
No 146
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=80.40 E-value=1.8 Score=31.43 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=19.1
Q ss_pred HHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
.+-..|. .+|.+||++.++...|.
T Consensus 245 ~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 245 EVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHHHHh-cCcccCCCHHHHHHHhc
Confidence 3445676 57999999999998874
No 147
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=80.19 E-value=2.6 Score=36.56 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=35.2
Q ss_pred ccceecccccccccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 11 LFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 11 ~~eilD~~l~~~~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
-..|++....-......-..+..|-..|++.+|.+||++-+|...+-.+..
T Consensus 263 ~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 263 KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 445666554211122344555666678999999999999999998877654
No 148
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=80.14 E-value=1.4 Score=33.45 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=22.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+..+|++.+|.+||++.+++..
T Consensus 267 ~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 267 KALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 46688999999999999999998874
No 149
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=80.09 E-value=1.6 Score=32.19 Aligned_cols=25 Identities=16% Similarity=0.096 Sum_probs=21.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|++||++.+++.
T Consensus 259 ~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 259 AGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3567888999999999999999886
No 150
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=80.05 E-value=2.6 Score=32.36 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
+.+.++-..|++.+|..||+..++...++.+
T Consensus 270 e~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 270 EALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 3455677799999999999999999888754
No 151
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=80.00 E-value=1.9 Score=30.65 Aligned_cols=26 Identities=12% Similarity=0.218 Sum_probs=22.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.++..
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 227 QDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 44677888999999999999999864
No 152
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=79.91 E-value=1.9 Score=31.20 Aligned_cols=26 Identities=19% Similarity=0.054 Sum_probs=22.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 253 ~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 253 PEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhh
Confidence 35788899999999999999999874
No 153
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=79.87 E-value=1.4 Score=33.41 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHH--HHhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFE--LAGIR 60 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~--L~~i~ 60 (121)
..+..+..+|++.+|.+||++.+++.. +..+.
T Consensus 265 ~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 265 PLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred HHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 345688899999999999999998874 54443
No 154
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=79.83 E-value=1.7 Score=31.10 Aligned_cols=25 Identities=28% Similarity=0.242 Sum_probs=20.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.++..
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 3456778999999999999998763
No 155
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=79.77 E-value=2 Score=31.17 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=22.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.++..
T Consensus 229 ~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 229 KLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 45667778999999999999999976
No 156
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=79.49 E-value=1.7 Score=31.92 Aligned_cols=24 Identities=13% Similarity=-0.022 Sum_probs=20.9
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|++||++.+++.
T Consensus 263 ~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 263 GKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHHHHhccCchhcCCHHHHhc
Confidence 457888999999999999999874
No 157
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=79.32 E-value=2.1 Score=30.73 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|+..+|.+||++.+++.
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhh
Confidence 3566777899999999999999864
No 158
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=79.22 E-value=1.7 Score=31.10 Aligned_cols=26 Identities=23% Similarity=0.326 Sum_probs=21.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+...|++.+|.+||++.+++..
T Consensus 228 ~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 228 ELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhhC
Confidence 45667778999999999999998764
No 159
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=79.07 E-value=1.8 Score=30.81 Aligned_cols=25 Identities=16% Similarity=0.096 Sum_probs=20.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 230 ~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 230 EAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhc
Confidence 3455667899999999999999864
No 160
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=79.06 E-value=1.9 Score=31.12 Aligned_cols=25 Identities=8% Similarity=0.106 Sum_probs=20.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.++..
T Consensus 237 ~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 237 AAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 3566778999999999999998864
No 161
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=78.99 E-value=1.8 Score=31.90 Aligned_cols=26 Identities=15% Similarity=0.020 Sum_probs=22.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+.++..+|++.+|.+||++.+++.
T Consensus 282 ~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 282 PEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hhHHHHHHHHcccCcccCcCHHHHhc
Confidence 35678889999999999999998864
No 162
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=78.96 E-value=1.6 Score=30.94 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=21.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|+..+|++||++.+++.
T Consensus 225 ~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 225 PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 34567788999999999999998864
No 163
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=78.32 E-value=2 Score=32.44 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=22.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 270 ~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 270 DALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHHHHHhccCCcccccCHHHHhh
Confidence 4577889999999999999999986
No 164
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=77.96 E-value=2.1 Score=31.47 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=21.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|++||++.+++.
T Consensus 265 ~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 265 NGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHHHHHhccCccccCCHHHHhc
Confidence 3456778999999999999999874
No 165
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=77.74 E-value=2.1 Score=30.24 Aligned_cols=26 Identities=8% Similarity=0.248 Sum_probs=22.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|+..+|.+||+..+++.
T Consensus 229 ~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 229 SELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 34567788999999999999999864
No 166
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=77.73 E-value=2 Score=31.62 Aligned_cols=26 Identities=19% Similarity=0.120 Sum_probs=22.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.+++.
T Consensus 273 ~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 273 TPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 35677888999999999999998864
No 167
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=77.73 E-value=1.9 Score=31.60 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=21.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+.++...|++.+|.+||++.+++.
T Consensus 262 ~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 262 PHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhHHHHHHHHhccCcccccCHHHHhc
Confidence 45567889999999999999998764
No 168
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=77.49 E-value=2 Score=31.36 Aligned_cols=25 Identities=16% Similarity=0.001 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.++..
T Consensus 256 ~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 256 TGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHHHhcCChhhcCCHHHHhc
Confidence 4557888999999999999998864
No 169
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=77.43 E-value=2.1 Score=32.09 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=21.3
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+...|++.+|.+||++.+++.
T Consensus 266 ~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 266 ALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHHHHcCcCcccCCCHHHHhc
Confidence 457888999999999999999876
No 170
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=77.25 E-value=2.1 Score=31.41 Aligned_cols=25 Identities=12% Similarity=0.044 Sum_probs=21.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 266 ~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 266 EGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHHHHHHHccCChhhcCCHHHHhc
Confidence 3566788999999999999998864
No 171
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=77.20 E-value=2.2 Score=32.60 Aligned_cols=25 Identities=12% Similarity=0.125 Sum_probs=22.2
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 286 ~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 286 QARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHHHHHHHhcCCchhcCCHHHHhc
Confidence 4567888999999999999999886
No 172
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=77.09 E-value=2.5 Score=30.35 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=21.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.++..
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 231 RQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 35566778999999999999999864
No 173
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=76.91 E-value=2.1 Score=31.46 Aligned_cols=25 Identities=12% Similarity=0.036 Sum_probs=21.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 282 ~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 282 HALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHHHHhcCChhhccCHHHHhc
Confidence 3457889999999999999998864
No 174
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=76.80 E-value=2.3 Score=31.70 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=22.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+-.+|++.+|.+||+|.+++..
T Consensus 242 ~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 242 YFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 45667779999999999999999763
No 175
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=76.51 E-value=3.7 Score=33.88 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=26.8
Q ss_pred HHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAFELAGIRASIG 64 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~ 64 (121)
.+-.+|...+|+.||+|.++.+.|+.+.....
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 34449999999999999999999998876544
No 176
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=76.36 E-value=2.1 Score=30.98 Aligned_cols=23 Identities=13% Similarity=0.150 Sum_probs=18.2
Q ss_pred HHHHhhhcCcCCCCCCCHHHHHH
Q 036602 32 AMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 32 ~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
++..+.|+..+|.+||+++++..
T Consensus 238 ~~~li~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 238 ARDFLGCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHHHHhcCChhhCcCHHHHhc
Confidence 34445688899999999999864
No 177
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=76.07 E-value=2.4 Score=31.48 Aligned_cols=24 Identities=17% Similarity=0.232 Sum_probs=21.0
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+..+|++.+|.+||++.+++.
T Consensus 245 ~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 245 FRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 456778999999999999999886
No 178
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=76.00 E-value=2.6 Score=30.80 Aligned_cols=25 Identities=16% Similarity=0.038 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.++..
T Consensus 260 ~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 260 SGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhc
Confidence 3467788999999999999988863
No 179
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=75.86 E-value=2.7 Score=31.54 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=23.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
.+..+..+|++.+|.+||++.++...+-
T Consensus 252 ~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 252 YFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 4566778999999999999999987543
No 180
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=75.79 E-value=2.4 Score=32.33 Aligned_cols=26 Identities=19% Similarity=0.084 Sum_probs=22.2
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.++..
T Consensus 272 ~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 272 PLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 35667888999999999999999864
No 181
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=75.32 E-value=1.9 Score=31.59 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=24.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
.+..+...|++.+|++||++++|...|..
T Consensus 238 ~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 238 EARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 34567778999999999999999887765
No 182
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=75.01 E-value=3.2 Score=29.59 Aligned_cols=26 Identities=19% Similarity=0.178 Sum_probs=22.0
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+-..|+..+|.+||++.+++.
T Consensus 230 ~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 230 PEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHh
Confidence 35666777899999999999999876
No 183
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=74.79 E-value=2.9 Score=30.56 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=22.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||++.+++.
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 245 EFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhh
Confidence 4667888999999999999999975
No 184
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=74.66 E-value=2.9 Score=29.85 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=22.3
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|+..+|..||++.+++.
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 234 PVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 35678889999999999999998864
No 185
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=74.41 E-value=3.1 Score=30.87 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=21.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 245 IFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHHHHHHHCcCCcccCcCHHHHhh
Confidence 3556778999999999999999886
No 186
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=74.35 E-value=3.1 Score=31.46 Aligned_cols=25 Identities=12% Similarity=0.130 Sum_probs=21.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||++.+++.
T Consensus 267 ~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 267 LALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 5677889999999999999998754
No 187
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=74.32 E-value=5.1 Score=31.75 Aligned_cols=37 Identities=16% Similarity=0.262 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602 27 EVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI 63 (121)
Q Consensus 27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~ 63 (121)
+-..+..+-.+|-+.+|..||++.+++..|+.+....
T Consensus 271 ~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 271 CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 4445566666799999999999999999999887643
No 188
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=74.28 E-value=3 Score=30.04 Aligned_cols=25 Identities=28% Similarity=0.298 Sum_probs=20.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|++||++.++..
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhc
Confidence 3556788999999999999988764
No 189
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=74.19 E-value=3.2 Score=30.48 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||++.+++.
T Consensus 263 ~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 263 KAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHHHHHHhCcCcccCcCHHHHhc
Confidence 4556788999999999999998763
No 190
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=73.98 E-value=3.6 Score=30.69 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=21.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+-.+|++.+|.+||++.+++..
T Consensus 242 ~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 242 YFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 35667789999999999999998764
No 191
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=73.36 E-value=3.7 Score=29.54 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=20.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.++..
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 239 EAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhh
Confidence 3455667999999999999988864
No 192
>PHA03209 serine/threonine kinase US3; Provisional
Probab=73.16 E-value=2.7 Score=32.34 Aligned_cols=22 Identities=14% Similarity=0.418 Sum_probs=19.2
Q ss_pred HHHhhhcCcCCCCCCCHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+-..|++.+|.+||++.+++.
T Consensus 329 ~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 329 FLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHHHcCCcccCcCHHHHhc
Confidence 3667899999999999999875
No 193
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=72.80 E-value=4.3 Score=29.32 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=18.2
Q ss_pred HHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 34 VAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 34 lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
+-..|. .+|.+||++.+|.+.|.
T Consensus 246 ~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 246 VMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHHh-cCcccccCHHHHHHHhc
Confidence 445565 59999999999998763
No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=72.74 E-value=3.2 Score=30.27 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=20.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.+++.
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 237 EFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 4556778999999999999988754
No 195
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=72.72 E-value=3.5 Score=30.13 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=21.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|++||+..+++.
T Consensus 259 ~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 259 VLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 3677888999999999999998764
No 196
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=72.46 E-value=3.8 Score=29.31 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|+..+|.+||++.+++.
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 235 DARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred HHHHHHHHHhhcCcccCCCHHHHhh
Confidence 4556778999999999999999875
No 197
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=71.95 E-value=3.8 Score=30.69 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=24.5
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH--HHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE--LAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~--L~~i~ 60 (121)
.+..+-.+|++.+|.+||++.+++.. ++.+.
T Consensus 264 ~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 264 EAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 45678889999999999999998863 44443
No 198
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=71.92 E-value=3.4 Score=31.57 Aligned_cols=26 Identities=8% Similarity=0.106 Sum_probs=22.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+-.+|++.+|.+||++.+++.
T Consensus 285 ~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 285 SQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred hHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 34567889999999999999999875
No 199
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=71.88 E-value=3.2 Score=30.21 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=20.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.+++.
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 237 SFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhc
Confidence 3556777899999999999999865
No 200
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=71.88 E-value=3.2 Score=30.54 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=21.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+..+|++.+|.+||++.+++.
T Consensus 244 ~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 244 RLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHHcccChhhCcCHHHHcc
Confidence 5677888999999999999998875
No 201
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=71.79 E-value=3.6 Score=31.18 Aligned_cols=26 Identities=12% Similarity=0.094 Sum_probs=21.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+..+|++.+|.+||++.+++.
T Consensus 262 ~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 262 PSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 35667788999999999999988754
No 202
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=71.77 E-value=2.2 Score=30.33 Aligned_cols=29 Identities=10% Similarity=-0.058 Sum_probs=23.7
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+-..|++.+|..||+++.|.+.|.
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 228 DEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 45667888999999999999977777664
No 203
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=71.74 E-value=3.8 Score=30.98 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=22.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+-..|++.+|.+||++.+++.
T Consensus 268 ~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 268 PEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 45677889999999999999998776
No 204
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=71.67 E-value=3.6 Score=29.89 Aligned_cols=24 Identities=17% Similarity=0.098 Sum_probs=20.4
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+.++-..|++.+|.+||++.+++.
T Consensus 257 ~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 257 GIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 456778999999999999998864
No 205
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=71.32 E-value=3.9 Score=30.05 Aligned_cols=25 Identities=12% Similarity=0.134 Sum_probs=21.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|++||++.+++.
T Consensus 244 ~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 244 EFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 4566778999999999999998865
No 206
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=71.22 E-value=3.8 Score=31.35 Aligned_cols=25 Identities=8% Similarity=-0.052 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.+++.
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 4566777999999999999999876
No 207
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=71.13 E-value=3.8 Score=31.20 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 272 ~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 272 QAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3567888999999999999999975
No 208
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=70.31 E-value=4.3 Score=30.60 Aligned_cols=26 Identities=19% Similarity=0.075 Sum_probs=22.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.+++.
T Consensus 287 ~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 287 DDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred hHHHHHHHHHcCCCchhccCHHHHhc
Confidence 34667889999999999999999885
No 209
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=70.06 E-value=3.7 Score=29.92 Aligned_cols=25 Identities=12% Similarity=0.056 Sum_probs=20.9
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||+..+++.
T Consensus 254 ~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 254 KFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HHHHHHHHHhCCChhhCcCHHHHhc
Confidence 4566777999999999999988753
No 210
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=69.79 E-value=5 Score=29.28 Aligned_cols=26 Identities=15% Similarity=0.110 Sum_probs=21.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||++.++..
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 236 DDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHhc
Confidence 34556778999999999999998875
No 211
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=69.60 E-value=4 Score=30.21 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=21.0
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|.+||++.+++.
T Consensus 262 ~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 262 GAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhc
Confidence 456788999999999999999876
No 212
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=69.32 E-value=4.1 Score=30.29 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=20.7
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+..+|+..+|.+||++.++..
T Consensus 245 ~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 245 FRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHHhhcChhhCCCHHHHhh
Confidence 456778999999999999999875
No 213
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=69.31 E-value=4.1 Score=31.38 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 263 ~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 263 EAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHHHHhCCCChhhCcCHHHHhc
Confidence 4567888999999999999999875
No 214
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=68.34 E-value=4.1 Score=30.51 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=21.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||++.+++.
T Consensus 248 ~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 248 SFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3556777999999999999999875
No 215
>PLN00181 protein SPA1-RELATED; Provisional
Probab=67.40 E-value=4.6 Score=34.82 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
....+...|++.+|.+||+|.+++.
T Consensus 240 ~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 240 KEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHhCCCChhhCcChHHHhh
Confidence 4456778899999999999999864
No 216
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=66.85 E-value=5.2 Score=29.63 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=20.7
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..|-..|++.+|.+||+..+++.
T Consensus 290 ~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 290 VFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred HHHHHHHHhccCcccccCHHHHhc
Confidence 556778999999999999998864
No 217
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=66.84 E-value=5.1 Score=29.08 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=21.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|+..+|.+||+..++..
T Consensus 236 ~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 236 EFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 4566778899999999999999875
No 218
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=65.89 E-value=5.3 Score=29.68 Aligned_cols=24 Identities=21% Similarity=0.044 Sum_probs=20.7
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-..|++.+|.+||++.+++.
T Consensus 266 ~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 266 GLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhc
Confidence 456778999999999999998875
No 219
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=65.57 E-value=6 Score=28.37 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=21.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+..+...|++.+|.+||+..+++.
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 34566888999999999999998863
No 220
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=64.97 E-value=6 Score=30.24 Aligned_cols=25 Identities=12% Similarity=0.129 Sum_probs=21.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|++||++.+++.
T Consensus 290 ~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 290 QARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred hHHHHHHHHhccCcccCCCHHHHhc
Confidence 3456778999999999999999876
No 221
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=64.74 E-value=6.5 Score=29.87 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||+..+++.
T Consensus 275 ~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 275 EALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHHHHhCCCchhccCHHHHhC
Confidence 4567888999999999999999875
No 222
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=64.08 E-value=6.5 Score=29.25 Aligned_cols=24 Identities=13% Similarity=0.128 Sum_probs=20.8
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-..|++.+|.+||+..+++.
T Consensus 290 ~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 290 AFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred HHHHHHHHhccCcccCCCHHHHhc
Confidence 456788999999999999999864
No 223
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=63.61 E-value=5.9 Score=29.39 Aligned_cols=25 Identities=12% Similarity=0.042 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 263 ~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 263 HAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred HHHHHHHHHhccCchhccCHHHHhc
Confidence 3456778999999999999998874
No 224
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=62.58 E-value=8.5 Score=28.58 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=21.4
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
+..+-..|++.+|.+||++.+++..
T Consensus 247 l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 247 LRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhhC
Confidence 4567779999999999999998873
No 225
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=62.54 E-value=7.3 Score=29.85 Aligned_cols=25 Identities=12% Similarity=0.159 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||+..+++.
T Consensus 293 ~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 293 QARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHHHHHHhcCcCcccCCCHHHHhc
Confidence 4567788999999999999999875
No 226
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=62.44 E-value=6.7 Score=29.01 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+...|++.+|.+||++.+++..
T Consensus 244 ~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 244 IFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 35567789999999999999998763
No 227
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=60.93 E-value=5.9 Score=33.65 Aligned_cols=45 Identities=22% Similarity=0.112 Sum_probs=29.6
Q ss_pred Cccceeccccccccc-HHHHHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 10 RLFEVLDAQVLREAE-KEEVITIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 10 ~~~eilD~~l~~~~~-~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
++..|.||.-.-++. ...-..++.++..|++.+|.+||++.++++
T Consensus 581 Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 345677774321221 001112788899999999999999999865
No 228
>PHA02882 putative serine/threonine kinase; Provisional
Probab=60.85 E-value=9.6 Score=28.23 Aligned_cols=27 Identities=11% Similarity=0.039 Sum_probs=22.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
.+..+-..|...++++||++.++.+.|
T Consensus 267 ~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 267 FIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 355677789999999999999998765
No 229
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=60.51 E-value=8.2 Score=31.50 Aligned_cols=25 Identities=12% Similarity=0.271 Sum_probs=21.6
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 272 ~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 272 EMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHh
Confidence 4667888999999999999999865
No 230
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=59.74 E-value=8.7 Score=28.44 Aligned_cols=24 Identities=13% Similarity=0.043 Sum_probs=19.7
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-..|+..+|.+||++.+++.
T Consensus 248 ~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 248 LRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred HHHHHHHHccCChhHCcCHHHHhh
Confidence 344556799999999999999886
No 231
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=59.22 E-value=7.9 Score=29.47 Aligned_cols=24 Identities=21% Similarity=0.187 Sum_probs=21.1
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|.+||++.+++.
T Consensus 274 ~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 274 AVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 557778899999999999999884
No 232
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=57.88 E-value=8.7 Score=29.06 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.9
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-..|++.+|.+||+..+++.
T Consensus 274 ~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 274 AIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 456778999999999999999875
No 233
>PTZ00284 protein kinase; Provisional
Probab=57.43 E-value=9.2 Score=30.63 Aligned_cols=25 Identities=8% Similarity=0.154 Sum_probs=21.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||++.+++.
T Consensus 413 ~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 413 LLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHHHHHhCCcChhhCCCHHHHhc
Confidence 3457788999999999999999886
No 234
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=56.43 E-value=7 Score=28.98 Aligned_cols=29 Identities=10% Similarity=-0.115 Sum_probs=23.4
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
.+..+...|++.+|++||+...+.+.|+.
T Consensus 245 ~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 245 DAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 35678889999999999998777666654
No 235
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=54.35 E-value=11 Score=30.39 Aligned_cols=25 Identities=16% Similarity=0.238 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+...|++.+|.+||++.+++.
T Consensus 298 ~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 298 GMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHh
Confidence 4566778999999999999999864
No 236
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=54.34 E-value=6.5 Score=28.18 Aligned_cols=29 Identities=10% Similarity=-0.032 Sum_probs=22.9
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA 57 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~ 57 (121)
..+..+...|++.+|.+||+..++.+.|.
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 35677888999999999998877766543
No 237
>PHA03211 serine/threonine kinase US3; Provisional
Probab=53.85 E-value=11 Score=30.59 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=20.8
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..|-..|++.+|.+||+..|+++
T Consensus 431 ~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 431 VEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred HHHHHHHHcccChhhCcCHHHHhh
Confidence 456777999999999999999876
No 238
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=53.13 E-value=9.7 Score=27.33 Aligned_cols=21 Identities=10% Similarity=0.154 Sum_probs=18.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMK 50 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~ 50 (121)
.+..+...|++.+|.+||+..
T Consensus 248 ~~~~li~~~l~~~p~~R~~~~ 268 (280)
T cd05581 248 DAKDLIEKLLVLDPQDRLGVN 268 (280)
T ss_pred HHHHHHHHHhcCCHhhCCCcc
Confidence 456788899999999999993
No 239
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=52.84 E-value=12 Score=27.76 Aligned_cols=30 Identities=17% Similarity=0.084 Sum_probs=23.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG 58 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~ 58 (121)
..+..+-.+|++.+|.+||++...+..|..
T Consensus 259 ~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 259 SSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 346677889999999999997776666544
No 240
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=52.38 E-value=13 Score=27.60 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=20.2
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|.+||++.++..
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 445667899999999999999876
No 241
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=51.29 E-value=13 Score=27.60 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=20.6
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-.+|++.+|.+||+..+++.
T Consensus 262 ~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 262 GIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHHHHHHhccCChhhCCCHHHHhc
Confidence 456778999999999999998875
No 242
>PHA03212 serine/threonine kinase US3; Provisional
Probab=50.51 E-value=13 Score=29.23 Aligned_cols=25 Identities=8% Similarity=0.270 Sum_probs=21.1
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-..|++.+|.+||+..+++.
T Consensus 351 ~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 351 DLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHhcCChhhCCCHHHHhc
Confidence 4556778999999999999999875
No 243
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=46.39 E-value=19 Score=29.90 Aligned_cols=32 Identities=16% Similarity=0.313 Sum_probs=27.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
.++.+...|-.+.|.+||++.+|-..++.+.+
T Consensus 195 ~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 195 ELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 58889999999999999999999887766544
No 244
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=45.99 E-value=10 Score=27.70 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=21.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
.+..+...|++.+|.+||+..+++..+
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccchhhh
Confidence 356777889999999999998876443
No 245
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=45.71 E-value=16 Score=25.78 Aligned_cols=22 Identities=9% Similarity=-0.044 Sum_probs=18.3
Q ss_pred HHHHHHhhhcCcCCCCCCCHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKE 51 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~e 51 (121)
.+..+...|+..+|.+||++.+
T Consensus 219 ~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 219 EARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHhcCCHhhCCCccc
Confidence 4566778899999999999965
No 246
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=45.54 E-value=21 Score=26.24 Aligned_cols=24 Identities=8% Similarity=-0.096 Sum_probs=20.1
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
...+-..|++.+|.+||+..+++.
T Consensus 261 ~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 261 GIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhc
Confidence 456777899999999999998863
No 247
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=43.39 E-value=20 Score=27.28 Aligned_cols=24 Identities=17% Similarity=0.159 Sum_probs=20.7
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+..+-..|++.+|.+||+..+++.
T Consensus 276 ~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 276 AVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHHHHHHcCCChhhcCCHHHHhc
Confidence 457778999999999999988775
No 248
>PTZ00036 glycogen synthase kinase; Provisional
Probab=42.03 E-value=21 Score=28.51 Aligned_cols=25 Identities=12% Similarity=0.040 Sum_probs=21.8
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+..+-.+|++.+|.+||+..+++.
T Consensus 326 ~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 326 DAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhC
Confidence 4667888999999999999999875
No 249
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=42.03 E-value=31 Score=29.66 Aligned_cols=35 Identities=6% Similarity=0.129 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 27 EVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
+-..+.+|...|...++++||.-.+++..|+.+..
T Consensus 621 ~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 621 CPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred CHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 44567778889999999999999999998776654
No 250
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=40.48 E-value=39 Score=29.74 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 27 EVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
+=..+..|=+.|=+.+|.+||+.+++-..|+.....
T Consensus 730 CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 730 CPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 335667778899999999999999999999876543
No 251
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=40.38 E-value=42 Score=30.52 Aligned_cols=36 Identities=6% Similarity=0.094 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602 27 EVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS 62 (121)
Q Consensus 27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~ 62 (121)
|=..+.+|=..|.+.+|++||+...+++.+..+...
T Consensus 929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 334566788899999999999999999988887654
No 252
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=40.08 E-value=21 Score=28.12 Aligned_cols=30 Identities=13% Similarity=0.195 Sum_probs=25.0
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+.+|-..|..++|.+||....++-.|++.
T Consensus 417 hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 345566679999999999999999888865
No 253
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=39.64 E-value=41 Score=29.90 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 25 KEEVITIAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 25 ~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
+.|-+.+..+.+.|=..++.+||+-..+.+.+
T Consensus 338 k~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 338 KYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 45667888999999999999999999987544
No 254
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=39.45 E-value=22 Score=26.02 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=18.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEV 52 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV 52 (121)
.+..+...|++.+|.+||++.+.
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05632 231 EAKSICKMLLTKDPKQRLGCQEE 253 (285)
T ss_pred HHHHHHHHHccCCHhHcCCCccc
Confidence 45678889999999999996544
No 255
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=39.19 E-value=24 Score=30.00 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=20.8
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
+..+...|+..+|.+||++.+++..
T Consensus 610 ~~~~l~~lL~~dP~~R~ta~e~l~h 634 (669)
T cd05610 610 AQNAIEILLTMDPTKRAGLKELKQH 634 (669)
T ss_pred HHHHHHHHcccChhHCcCHHHHHhC
Confidence 4556677999999999999999763
No 256
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=36.70 E-value=30 Score=24.66 Aligned_cols=23 Identities=13% Similarity=0.027 Sum_probs=18.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKE 51 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~e 51 (121)
..+..+-..|++.+|.+||+|.+
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~ 243 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLK 243 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcc
Confidence 35667888999999999999544
No 257
>PHA03207 serine/threonine kinase US3; Provisional
Probab=36.52 E-value=29 Score=27.00 Aligned_cols=23 Identities=9% Similarity=0.275 Sum_probs=19.1
Q ss_pred HHHhhhcCcCCCCCCCHHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+-..|++.+|.+||++.+++..
T Consensus 353 ~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 353 YLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhccChhhCCCHHHHhhC
Confidence 34468999999999999998763
No 258
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=36.37 E-value=23 Score=25.95 Aligned_cols=22 Identities=5% Similarity=0.024 Sum_probs=17.5
Q ss_pred HHHHHHHhhhcCcCCCCCCCHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMK 50 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~ 50 (121)
..+..+...|++.+|.+||++.
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 230 EAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred HHHHHHHHHHccCCHHHhcCCC
Confidence 3456788999999999999433
No 259
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=35.44 E-value=13 Score=32.97 Aligned_cols=40 Identities=5% Similarity=0.080 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602 24 EKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI 63 (121)
Q Consensus 24 ~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~ 63 (121)
.++|=..+.+|.+.|=+.+...||+-.+++..|.++-..+
T Consensus 856 PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 856 PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 4567778889999999999999999999999999865543
No 260
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=35.42 E-value=25 Score=25.79 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=19.5
Q ss_pred HHHHHHhhhcCcCCCCCCC-----HHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPT-----MKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~-----M~eV~~ 54 (121)
.+..|...|++.+|.+||+ +.++..
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 231 DAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 4566788999999999997 555554
No 261
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=32.01 E-value=39 Score=28.28 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=19.7
Q ss_pred HHHhhhcCcCCCCCCCHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+-..|++.+|.+||+..++++
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhC
Confidence 5778999999999999999876
No 262
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=31.72 E-value=48 Score=29.30 Aligned_cols=22 Identities=23% Similarity=0.241 Sum_probs=17.8
Q ss_pred HHHhhhcCcCCCCCCCHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+-..|+..+|..||+-.++++
T Consensus 267 DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 267 DFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHHhcCCccCCCHHHHhh
Confidence 3446899999999999888654
No 263
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=31.60 E-value=43 Score=25.17 Aligned_cols=26 Identities=4% Similarity=0.102 Sum_probs=20.7
Q ss_pred HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.+..+-..|+..++.+||++.++...
T Consensus 232 ~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 232 EAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 34456678999999999999998763
No 264
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=30.22 E-value=39 Score=24.64 Aligned_cols=20 Identities=10% Similarity=0.077 Sum_probs=16.1
Q ss_pred HHHHHHhhhcCcCCCCCCCH
Q 036602 30 TIAMVAKRYLNLNGKKQPTM 49 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M 49 (121)
.+..+...|++.+|.+||+.
T Consensus 227 ~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 227 ASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred HHHHHHHHHhcCCHHHhcCC
Confidence 45567789999999999944
No 265
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=29.79 E-value=33 Score=25.68 Aligned_cols=25 Identities=16% Similarity=0.204 Sum_probs=19.8
Q ss_pred HHHHHHhhhcCcCCCCCCCH-----HHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPTM-----KEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~M-----~eV~~ 54 (121)
.+..+...|++.+|.+||+. .++..
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 34567789999999999998 66543
No 266
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=28.93 E-value=34 Score=25.10 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=19.6
Q ss_pred HHHHHHhhhcCcCCCCCCC-----HHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQPT-----MKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~-----M~eV~~ 54 (121)
.+..+...|++.+|.+||+ ..++..
T Consensus 231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 231 DARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3556778899999999999 666654
No 267
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=27.71 E-value=26 Score=26.15 Aligned_cols=26 Identities=4% Similarity=-0.144 Sum_probs=19.3
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAFEL 56 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~~L 56 (121)
+..+-..|++.+|.+||+...+.+.|
T Consensus 220 ~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 45667899999999998765554444
No 268
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=25.96 E-value=1.4e+02 Score=22.26 Aligned_cols=22 Identities=9% Similarity=0.061 Sum_probs=16.4
Q ss_pred HHHHhhhcCcCCCCCCCHHHHHH
Q 036602 32 AMVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 32 ~~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
..+-..|++ +|.+||+..++..
T Consensus 241 ~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 241 LDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHcc-ChhhCCCHHHHhC
Confidence 334456776 8999999998764
No 269
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=25.81 E-value=97 Score=26.17 Aligned_cols=34 Identities=18% Similarity=0.071 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 26 EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
.+-..+..+-..|=+.+|.+||+-.+.+..++..
T Consensus 546 ~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 546 HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 3456667888999999999999999999998874
No 270
>PF00440 TetR_N: Bacterial regulatory proteins, tetR family; InterPro: IPR001647 This entry represents a DNA-binding domain with a helix-turn-helix (HTH) structure that is found in several bacterial and archaeal transcriptional regulators, such as TetR, the tetracycline resistance repressor. Numerous other transcriptional regulatory proteins also contain HTH-type DNA-binding domains, and can be grouped into subfamiles based on sequence similarity. The domain represented by this entry is found in a subfamily of proteins that includes the transcriptional regulators TetR, TetC, AcrR, BetI, Bm3R1, EnvR, QacR, MtrR, TcmR, Ttk, YbiH, and YhgD [, , ]. Many of these proteins function as repressors that control the level of susceptibility to hydrophobic antibiotics and detergents. They all have similar molecular weights, ranging from 21 to 25 kDa. The helix-turn-helix motif is located in the initial third of the protein. The 3D structure of the homodimeric TetR protein complexed with 7-chloro-tetracycline-magnesium has been determined to 2.1 A resolution []. TetR folds into ten alpha-helices with connecting turns and loops. The three N-terminal alpha-helices of the repressor form the DNA-binding domain: this structural motif encompasses an HTH fold with an inverse orientation compared with that of other DNA-binding proteins.; GO: 0003677 DNA binding; PDB: 3NPI_B 3IUV_A 3CCY_A 2JK3_A 2FX0_A 2JJ7_A 2WV1_B 3BTI_D 3BR6_E 3BR5_A ....
Probab=25.67 E-value=47 Score=17.81 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=23.4
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~ 60 (121)
+++.|+.+....+-..-+|++|++.+.--+
T Consensus 1 Il~aa~~l~~~~G~~~~s~~~Ia~~~gvs~ 30 (47)
T PF00440_consen 1 ILEAALELFAEKGYEAVSIRDIARRAGVSK 30 (47)
T ss_dssp HHHHHHHHHHHHHTTTSSHHHHHHHHTSCH
T ss_pred CHHHHHHHHHHhCHHhCCHHHHHHHHccch
Confidence 356777888888899999999998875433
No 271
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=24.89 E-value=51 Score=23.38 Aligned_cols=22 Identities=9% Similarity=0.024 Sum_probs=17.4
Q ss_pred HHHHHHHhhhcCcCCCCCCCHH
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMK 50 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~ 50 (121)
..+..+-.+|++.+|.+||+..
T Consensus 227 ~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 227 TEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred HHHHHHHHHHccCChhHcCCcc
Confidence 3455667789999999999983
No 272
>PHA03052 Hypothetical protein; Provisional
Probab=24.25 E-value=58 Score=19.79 Aligned_cols=14 Identities=21% Similarity=0.316 Sum_probs=11.2
Q ss_pred ccCCceeeeeeeee
Q 036602 106 KKDKNFLIPVSVCI 119 (121)
Q Consensus 106 ~~~~~~~~~~~~~~ 119 (121)
.=-+||.||..||+
T Consensus 10 slGs~ltI~Ckv~l 23 (69)
T PHA03052 10 SLGSNLTITCKVSL 23 (69)
T ss_pred EccCCceEeEEEEe
Confidence 34579999999986
No 273
>PHA03210 serine/threonine kinase US3; Provisional
Probab=24.16 E-value=73 Score=25.95 Aligned_cols=22 Identities=14% Similarity=0.147 Sum_probs=18.6
Q ss_pred HHHhhhcCcCCCCCCCHHHHHH
Q 036602 33 MVAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 33 ~lAl~C~~~~~~~RP~M~eV~~ 54 (121)
.+-..|++.+|.+||+..|++.
T Consensus 432 ~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 432 YPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhccCcccCcCHHHHhh
Confidence 3445799999999999999875
No 274
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=23.93 E-value=57 Score=24.61 Aligned_cols=19 Identities=32% Similarity=0.342 Sum_probs=16.1
Q ss_pred HHHHHHhhhcCcCCCCCCC
Q 036602 30 TIAMVAKRYLNLNGKKQPT 48 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP~ 48 (121)
.+..+...|++.+|.+||+
T Consensus 231 ~~~~ll~~~L~~dP~~R~~ 249 (329)
T cd05618 231 KAASVLKSFLNKDPKERLG 249 (329)
T ss_pred HHHHHHHHHhcCCHHHcCC
Confidence 3456778999999999998
No 275
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=23.21 E-value=1.3e+02 Score=24.92 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602 29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61 (121)
Q Consensus 29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~ 61 (121)
..+.+|=..|=..+|++|||-......|+.+..
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 455567789999999999999988887777654
No 276
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=23.15 E-value=44 Score=29.44 Aligned_cols=35 Identities=9% Similarity=0.150 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602 25 KEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGI 59 (121)
Q Consensus 25 ~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i 59 (121)
..|=-.+.+|-..|-+.+|.+||...++-+.++.+
T Consensus 489 eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 489 EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 44566788888999999999999999987776653
No 277
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=23.06 E-value=66 Score=23.95 Aligned_cols=21 Identities=5% Similarity=-0.009 Sum_probs=17.1
Q ss_pred HHHHHhhhcCcCCCCCCCHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKE 51 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~e 51 (121)
+..+-..|++.+|.+||++.+
T Consensus 225 ~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 225 AQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHhhcCHhHcCCCCC
Confidence 445668999999999999655
No 278
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=22.13 E-value=61 Score=28.10 Aligned_cols=22 Identities=27% Similarity=0.255 Sum_probs=16.4
Q ss_pred cccccccccccccCCceeeeee
Q 036602 95 FFNSVTSKQMVKKDKNFLIPVS 116 (121)
Q Consensus 95 ~~~~~s~~~~~~~~~~~~~~~~ 116 (121)
+.++++++.-.++++-|.|||.
T Consensus 22 ~~ss~~s~~~ep~~~~~~~~~~ 43 (1103)
T KOG1420|consen 22 SSSSSSSSVHEPKMDALIIPVT 43 (1103)
T ss_pred CcccccccccCCccCcccchhH
Confidence 3445566777899999999974
No 279
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=22.05 E-value=65 Score=24.08 Aligned_cols=23 Identities=4% Similarity=-0.031 Sum_probs=18.1
Q ss_pred HHHHHhhhcCcCCCCCCCHHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKEVA 53 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~eV~ 53 (121)
+..+-..|++.+|.+||++.+.+
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHH
Confidence 45667799999999999986433
No 280
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=21.07 E-value=66 Score=23.43 Aligned_cols=25 Identities=16% Similarity=0.109 Sum_probs=18.9
Q ss_pred HHHHHHhhhcCcCCCCCC-----CHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQP-----TMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP-----~M~eV~~ 54 (121)
.+..+-..|++.+|.+|| ++.++.+
T Consensus 225 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 225 ELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 344556789999999999 5777755
No 281
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=20.98 E-value=91 Score=22.20 Aligned_cols=20 Identities=25% Similarity=0.398 Sum_probs=13.2
Q ss_pred HHhhhcCcCCCCCCCHHHHHH
Q 036602 34 VAKRYLNLNGKKQPTMKEVAF 54 (121)
Q Consensus 34 lAl~C~~~~~~~RP~M~eV~~ 54 (121)
+-.+|+ .+|.+||++.+++.
T Consensus 241 ~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 241 FLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred HHHHHh-cChhhCCCHHHHhc
Confidence 334455 37888888887764
No 282
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=20.53 E-value=62 Score=25.27 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=18.0
Q ss_pred HHhhhcCcCCCCCCCHHHHHHH
Q 036602 34 VAKRYLNLNGKKQPTMKEVAFE 55 (121)
Q Consensus 34 lAl~C~~~~~~~RP~M~eV~~~ 55 (121)
.-..|...+|+.||+..+.+.-
T Consensus 255 Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 255 FLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HHHHHhhcCcccCcCHHHHhhC
Confidence 3457999999999999987653
No 283
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=20.41 E-value=52 Score=23.79 Aligned_cols=26 Identities=15% Similarity=0.101 Sum_probs=19.2
Q ss_pred HHHHHhhhcCcCCCCCCCHHH-HHHHH
Q 036602 31 IAMVAKRYLNLNGKKQPTMKE-VAFEL 56 (121)
Q Consensus 31 v~~lAl~C~~~~~~~RP~M~e-V~~~L 56 (121)
+..+-..|++.+|.+||+..+ .+..|
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~~~~~~l 251 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRGGSADEV 251 (277)
T ss_pred HHHHHHHHccCChhHccCCCcccHHHH
Confidence 455667899999999997666 44444
No 284
>PF12091 DUF3567: Protein of unknown function (DUF3567); InterPro: IPR021951 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 90 amino acids in length. This protein has a conserved EIVDK sequence motif.
Probab=20.32 E-value=2.2e+02 Score=18.01 Aligned_cols=50 Identities=24% Similarity=0.212 Sum_probs=29.8
Q ss_pred cceeccccccc-ccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602 12 FEVLDAQVLRE-AEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG 64 (121)
Q Consensus 12 ~eilD~~l~~~-~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~ 64 (121)
.||+|+....+ +-...+.+..+-++.-+ ....|+..+|-..|.+.....+
T Consensus 29 yEIVDK~~~rEifi~G~~Ae~Fr~~V~~l---i~~~Pt~EevDdfL~~y~~l~~ 79 (85)
T PF12091_consen 29 YEIVDKNARREIFIDGSWAEMFREDVQAL---IASEPTQEEVDDFLGGYDALMQ 79 (85)
T ss_pred cEEeecCCCceEEeCcHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHh
Confidence 69999987554 22222333333222222 2568999999999987665444
No 285
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=20.26 E-value=96 Score=28.03 Aligned_cols=31 Identities=13% Similarity=0.199 Sum_probs=23.4
Q ss_pred HHHHHHhhhcCcCCCCCC-CHHHHHHHHHhhh
Q 036602 30 TIAMVAKRYLNLNGKKQP-TMKEVAFELAGIR 60 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP-~M~eV~~~L~~i~ 60 (121)
.+..+..+|++.+|.+|| ++.++...|+...
T Consensus 260 ~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 260 FLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 356788899999999996 5666666676543
No 286
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=20.16 E-value=75 Score=23.80 Aligned_cols=25 Identities=16% Similarity=0.113 Sum_probs=19.3
Q ss_pred HHHHHHhhhcCcCCCCCC-----CHHHHHH
Q 036602 30 TIAMVAKRYLNLNGKKQP-----TMKEVAF 54 (121)
Q Consensus 30 ~v~~lAl~C~~~~~~~RP-----~M~eV~~ 54 (121)
.+..+-..|++.+|.+|| +..++..
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 345667799999999999 6777654
Done!