BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036603
(926 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia
Coli
pdb|2DQM|A Chain A, Crystal Structure Of Aminopeptidase N Complexed With
Bestatin
pdb|2ZXG|A Chain A, Aminopeptidase N Complexed With The Aminophosphinic
Inhibitor Of Pl250, A Transition State Analogue
Length = 870
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/885 (45%), Positives = 548/885 (61%), Gaps = 31/885 (3%)
Query: 54 QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
QP+ + DY+ P+Y +DL F L +KT+V++ ++ R S +PL L+G+DLKLV
Sbjct: 4 QPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTA-VSQAVRHGASDAPLRLNGEDLKLV 62
Query: 114 SIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQ 173
S+ +N + + L + + P FTL+I+ EI P NT+LEG+Y+S CTQ
Sbjct: 63 SVHINDEPWTA--WKEEEGALVISNLPE-RFTLKIINEISPAANTALEGLYQSGDALCTQ 119
Query: 174 CEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDP 233
CEAEGFR IT+Y DRPD++A++ I ADK YP LLSNGN + +G LE GRH+ W+DP
Sbjct: 120 CEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDP 179
Query: 234 FKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDED 293
F KPCYLFALVAG + D F TRSGR+V+L ++ +L + AM SLK +MKWDE+
Sbjct: 180 FPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEE 239
Query: 294 VFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEY 353
FGLEYDLD++ IVAV FNMGAMENK LNIFNSK VLA +TA+D DY I VIGHEY
Sbjct: 240 RFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEY 299
Query: 354 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGP 413
FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD+GSR V RI +V +R QF +DA P
Sbjct: 300 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASP 359
Query: 414 MAHPVRPHS------------YIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCE 461
MAHP+RP Y KGAEV+RM TLLG + F+KGM LYF+RHDG A TC+
Sbjct: 360 MAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCD 419
Query: 462 DFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKE 521
DF AM DA++ + ++F WYSQ+GTP + V Y+ ET Y+L Q P+TP Q K+
Sbjct: 420 DFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQ 479
Query: 522 PMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISE 581
P+ IP AI L ++ GK +PL H PV +VL VT+ E+ FVF ++
Sbjct: 480 PLHIPFAIELYDNEGKVIPLQKGGH------------PV-NSVLNVTQAEQTFVFDNVYF 526
Query: 582 RPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKLMLSLVADFQQN 641
+P+P++L +SAP++ +F+RW+A Q L + VA QQ
Sbjct: 527 QPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQG 586
Query: 642 KPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRK 701
+PL L FR++L D +D A+ +TLP E+ ++ ++ DP A+ VR + +
Sbjct: 587 QPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTR 646
Query: 702 QLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYK 761
LA+EL E L + N EY H ++A+R L+N L +LA E L +++
Sbjct: 647 TLATELADELL-AIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFH 705
Query: 762 TATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECV 821
A NMT+ AAL+A V RD ++ ++ KW + LV++KWF LQA S +E V
Sbjct: 706 EANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETV 765
Query: 822 QRLLDHPAFDLRNPNKVYSLIGGFCGS-PVNLHAKDGSGYKFLGEMVVQLDKINPQVASR 880
+ LL H +F + NPN++ SLIG F GS P HA+DGSGY FL EM+ L+ NPQVASR
Sbjct: 766 RGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASR 825
Query: 881 MVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA 925
++ R +R+D RQ +A LE + LS +++E +K+LA
Sbjct: 826 LIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 870
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A
Compartmentalized, Gated Active Site
pdb|2HPT|A Chain A, Crystal Structure Of E. Coli Pepn (Aminopeptidase N)in
Complex With Bestatin
pdb|3KED|A Chain A, Crystal Structure Of Aminopeptidase N In Complex With 2,4-
Diaminobutyric Acid
pdb|3B2P|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Arginine
pdb|3B2X|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Lysine
pdb|3B34|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Phenylalanine
pdb|3B37|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Tyrosine
pdb|3B3B|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Tryptophan
pdb|3QJX|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With L-Serine
Length = 891
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/885 (45%), Positives = 548/885 (61%), Gaps = 31/885 (3%)
Query: 54 QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
QP+ + DY+ P+Y +DL F L +KT+V++ ++ R S +PL L+G+DLKLV
Sbjct: 25 QPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTA-VSQAVRHGASDAPLRLNGEDLKLV 83
Query: 114 SIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQ 173
S+ +N + + L + + P FTL+I+ EI P NT+LEG+Y+S CTQ
Sbjct: 84 SVHINDEPWTA--WKEEEGALVISNLPE-RFTLKIINEISPAANTALEGLYQSGDALCTQ 140
Query: 174 CEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDP 233
CEAEGFR IT+Y DRPD++A++ I ADK YP LLSNGN + +G LE GRH+ W+DP
Sbjct: 141 CEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDP 200
Query: 234 FKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDED 293
F KPCYLFALVAG + D F TRSGR+V+L ++ +L + AM SLK +MKWDE+
Sbjct: 201 FPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEE 260
Query: 294 VFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEY 353
FGLEYDLD++ IVAV FNMGAMENK LNIFNSK VLA +TA+D DY I VIGHEY
Sbjct: 261 RFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEY 320
Query: 354 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGP 413
FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD+GSR V RI +V +R QF +DA P
Sbjct: 321 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASP 380
Query: 414 MAHPVRPHS------------YIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCE 461
MAHP+RP Y KGAEV+RM TLLG + F+KGM LYF+RHDG A TC+
Sbjct: 381 MAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCD 440
Query: 462 DFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKE 521
DF AM DA++ + ++F WYSQ+GTP + V Y+ ET Y+L Q P+TP Q K+
Sbjct: 441 DFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQ 500
Query: 522 PMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISE 581
P+ IP AI L ++ GK +PL H PV +VL VT+ E+ FVF ++
Sbjct: 501 PLHIPFAIELYDNEGKVIPLQKGGH------------PV-NSVLNVTQAEQTFVFDNVYF 547
Query: 582 RPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKLMLSLVADFQQN 641
+P+P++L +SAP++ +F+RW+A Q L + VA QQ
Sbjct: 548 QPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQG 607
Query: 642 KPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRK 701
+PL L FR++L D +D A+ +TLP E+ ++ ++ DP A+ VR + +
Sbjct: 608 QPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTR 667
Query: 702 QLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYK 761
LA+EL E L + N EY H ++A+R L+N L +LA E L +++
Sbjct: 668 TLATELADELL-AIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFH 726
Query: 762 TATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECV 821
A NMT+ AAL+A V RD ++ ++ KW + LV++KWF LQA S +E V
Sbjct: 727 EANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETV 786
Query: 822 QRLLDHPAFDLRNPNKVYSLIGGFCGS-PVNLHAKDGSGYKFLGEMVVQLDKINPQVASR 880
+ LL H +F + NPN++ SLIG F GS P HA+DGSGY FL EM+ L+ NPQVASR
Sbjct: 787 RGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASR 846
Query: 881 MVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA 925
++ R +R+D RQ +A LE + LS +++E +K+LA
Sbjct: 847 LIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 891
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli
Aminopeptidase N
Length = 891
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/885 (45%), Positives = 548/885 (61%), Gaps = 31/885 (3%)
Query: 54 QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
QP+ + DY+ P+Y +DL F L +KT+V++ ++ R S +PL L+G+DLKLV
Sbjct: 25 QPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTA-VSQAVRHGASDAPLRLNGEDLKLV 83
Query: 114 SIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQ 173
S+ +N + + L + + P FTL+I+ EI P NT+LEG+Y+S CTQ
Sbjct: 84 SVHINDEPWTA--WKEEEGALVISNLPE-RFTLKIINEISPAANTALEGLYQSGDALCTQ 140
Query: 174 CEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDP 233
C+AEGFR IT+Y DRPD++A++ I ADK YP LLSNGN + +G LE GRH+ W+DP
Sbjct: 141 CQAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDP 200
Query: 234 FKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDED 293
F KPCYLFALVAG + D F TRSGR+V+L ++ +L + AM SLK +MKWDE+
Sbjct: 201 FPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEE 260
Query: 294 VFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEY 353
FGLEYDLD++ IVAV FNMGAMENK LNIFNSK VLA +TA+D DY I VIGHEY
Sbjct: 261 RFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEY 320
Query: 354 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGP 413
FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD+GSR V RI +V +R QF +DA P
Sbjct: 321 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASP 380
Query: 414 MAHPVRPHS------------YIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCE 461
MAHP+RP Y KGAEV+RM TLLG + F+KGM LYF+RHDG A TC+
Sbjct: 381 MAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCD 440
Query: 462 DFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKE 521
DF AM DA++ + ++F WYSQ+GTP + V Y+ ET Y+L Q P+TP Q K+
Sbjct: 441 DFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQ 500
Query: 522 PMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISE 581
P+ IP AI L ++ GK +PL H PV +VL VT+ E+ FVF ++
Sbjct: 501 PLHIPFAIELYDNEGKVIPLQKGGH------------PV-NSVLNVTQAEQTFVFDNVYF 547
Query: 582 RPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKLMLSLVADFQQN 641
+P+P++L +SAP++ +F+RW+A Q L + VA QQ
Sbjct: 548 QPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQG 607
Query: 642 KPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRK 701
+PL L FR++L D +D A+ +TLP E+ ++ ++ DP A+ VR + +
Sbjct: 608 QPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTR 667
Query: 702 QLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYK 761
LA+EL E L + N EY H ++A+R L+N L +LA E L +++
Sbjct: 668 TLATELADELL-AIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFH 726
Query: 762 TATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECV 821
A NMT+ AAL+A V RD ++ ++ KW + LV++KWF LQA S +E V
Sbjct: 727 EANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETV 786
Query: 822 QRLLDHPAFDLRNPNKVYSLIGGFCGS-PVNLHAKDGSGYKFLGEMVVQLDKINPQVASR 880
+ LL H +F + NPN++ SLIG F GS P HA+DGSGY FL EM+ L+ NPQVASR
Sbjct: 787 RGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASR 846
Query: 881 MVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA 925
++ R +R+D RQ +A LE + LS +++E +K+LA
Sbjct: 847 LIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 891
>pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen
Neisseria Meningitidis
Length = 867
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/880 (45%), Positives = 514/880 (58%), Gaps = 34/880 (3%)
Query: 59 FLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVN 118
+LKDY+ P Y+ DL F + E +T+V S++TV P+ G PLVLDG KL+S+K+N
Sbjct: 7 YLKDYQTPAYHILKTDLHFDINEPQTVVKSRLTVEPQRVGE--PLVLDGS-AKLLSVKIN 63
Query: 119 GIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEG 178
G DY L+ LT+ P+ FT+E+ TEI P +N SL G+Y S GN TQCE EG
Sbjct: 64 G---AAADYVLEGETLTIAGVPSERFTVEVETEILPAENKSLXGLYASGGNLFTQCEPEG 120
Query: 179 FRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPC 238
FRKITFY DRPD+ +K+ I ADK YPVLLSNGN I+ G GRH+ WEDPF KP
Sbjct: 121 FRKITFYIDRPDVXSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPS 180
Query: 239 YLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLE 298
YLFALVAG L +D F T SGR V + +T D PK A+ SLK A KWDE FGLE
Sbjct: 181 YLFALVAGDLAVTEDYFTTXSGRNVKIEFYTTEADKPKVGFAVESLKNAXKWDETRFGLE 240
Query: 299 YDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWT 358
YDLD+F +VAV DFN GA ENK LNIFN+K VLA TA+D D+ I V+GHEYFHNWT
Sbjct: 241 YDLDIFXVVAVGDFNXGAXENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT 300
Query: 359 GNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPV 418
GNRVTCRDWFQLSLKEGLTVFRDQEFS D SR V+RI ++ LR +QFP+DAGP AHPV
Sbjct: 301 GNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPV 360
Query: 419 RPHS------------YIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAA 466
RP S Y KGAEVVR Y TLLG +GF+KG LYF+RHDGQAVTC+DF AA
Sbjct: 361 RPASYEEXNNFYTXTVYEKGAEVVRXYHTLLGEEGFQKGXKLYFQRHDGQAVTCDDFRAA 420
Query: 467 MRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIP 526
DAN F LWYSQAGTP L+ + + L Q VP TP K+P IP
Sbjct: 421 XADANGINLDQFALWYSQAGTPVLEAEGRL--KNNIFELTVKQTVPPTPDXTDKQPXXIP 478
Query: 527 VAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPS 586
V +GLLN +G+ + + GK + VL +T+ E+ F+ ++E +PS
Sbjct: 479 VKVGLLNRNGEAVAFD---YQGKRAT---------EAVLLLTEAEQTFLLEGVTEAVVPS 526
Query: 587 ILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKLMLSLVADFQQNKPLVL 646
+LRG+SAP+ F RWEA Q L R+ + + +A L
Sbjct: 527 LLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPK 586
Query: 647 NPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASE 706
+ K + ++ D LD F A + +P E E+ D E DP H R + LA
Sbjct: 587 HEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVH 646
Query: 707 L--KAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTAT 764
K L + Y ++ R L+N+ A++ + A I +A + + A
Sbjct: 647 FLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEXAQ 706
Query: 765 NMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRL 824
N T ++ L+A+ R+ +L F K+ D LV +K+FAL S ++ V+
Sbjct: 707 NXTHEWGILSAVNGNESDTRNRLLAQFADKFSDDALVXDKYFALVGSSRRSDTLQQVRTA 766
Query: 825 LDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSA 884
L HP F L NPNK SLIG F + + HA+DGSGY+F+ + V+++D+ NPQVA+R+V A
Sbjct: 767 LQHPKFSLENPNKARSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQA 826
Query: 885 FSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSL 924
F+ + + R+NL K L+ I + GLS++V EI K L
Sbjct: 827 FNLCNKLEPHRKNLVKQALQRIRAQEGLSKDVGEIVGKIL 866
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 15
pdb|3Q44|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 16
Length = 891
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/912 (34%), Positives = 486/912 (53%), Gaps = 77/912 (8%)
Query: 54 QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
+PK + KDYK + + V L ++ +++TIV S + + LV DG LK+
Sbjct: 1 EPKIHYRKDYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKIN 60
Query: 114 SIKVNGIELKEGD-YHLDSRHLTLQSP--PNGAFTLEIVTEIYPQKNTSLEGIYKSSGNF 170
I +N +L EG+ Y D+ LT+ S P F I+P+ N +L G+YKS
Sbjct: 61 EISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKSKNII 120
Query: 171 CTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALW 230
+QCEA GFR+ITF+ DRPD+MAKY + ADK YPVLLSNG+ + + GGRH A +
Sbjct: 121 VSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARF 180
Query: 231 EDPFKKPCYLFALVAGQLESRDDIFVTR-SGRKVSLRIWTPAQDLPKTAHAMYSLKAAMK 289
DP KPCYLFA+VAG L+ ++T+ + +KV L +++ + + K A+ LK +M
Sbjct: 181 NDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMA 240
Query: 290 WDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVI 349
+DED FGLEYDL N+VAV DFN+GAMENK LNIFN+ +LAS + + D YA IL V+
Sbjct: 241 FDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVV 300
Query: 350 GHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQ 409
GHEYFH +TGNRVT RDWFQL+LKEGLTV R+ FS +M R++ V LR+ QF +
Sbjct: 301 GHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLE 360
Query: 410 DAGPMAHPVRPHSYI------------KGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQA 457
D+ P++HP+RP SY+ KG+EV+RMY T+LG + ++KG D+Y K++DG
Sbjct: 361 DSSPLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNT 420
Query: 458 VTCEDFFAAMRDA-------NDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQE 510
TCEDF AM A N A +LLW+SQ+GTP + +Y AE + YS+ Q
Sbjct: 421 ATCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQY 480
Query: 511 VPSTPGQPVKEPMFIPVAIGLLN-SSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTK 569
Q K+P+FIP+++GL+N +GK+M + T L +TK
Sbjct: 481 TKPDENQKEKKPLFIPISVGLINPENGKEM--------------------ISQTTLELTK 520
Query: 570 KEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARK 629
+ + FVF++I+ +PIPS+ RG+SAP+ F R+ + + K
Sbjct: 521 ESDTFVFNNIAVKPIPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMK 580
Query: 630 LMLSLVADFQQNKPLVL--------NPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIM 681
+L +F + K L N +F+ + +L D D F + ++LP + I+
Sbjct: 581 QILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHADAGFKSYIVSLPQDRYII 640
Query: 682 DMMEVADPDAVHAVRTFIRKQLASEL-------------KAEFLTTVENNRSTGEYVFNH 728
+ + D D + + +I KQ+ +L KA+ LT + F+
Sbjct: 641 NFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHVD---FDQ 697
Query: 729 HNMARRALKNIALAYLASLEDADIVELALREYKT--ATNMTEQFAALAAIVQKPGKIRDE 786
NM R L+N L+ L+ + +I+ + K+ +N +++A K ++ D+
Sbjct: 698 MNM--RTLRNTLLSLLSKAQYPNILNEIIEHSKSPYPSNWLTSL-SVSAYFDKYFELYDK 754
Query: 787 VLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFC 846
Y + D L++ +W + SD E +++L + D +NPN + ++ F
Sbjct: 755 T----YKLSKDDELLLQEWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFT 810
Query: 847 GSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMI 906
+ H G GYK + E++ + DK NP VA+++ F W + D RQ L ++ +
Sbjct: 811 NNLRRFHDISGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNKLDTKRQELMLNEMNTM 870
Query: 907 MSANGLSENVFE 918
+ +S N+ E
Sbjct: 871 LQEPQISNNLKE 882
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With The Phosphinate Dipeptide Analog
Length = 890
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/912 (34%), Positives = 486/912 (53%), Gaps = 77/912 (8%)
Query: 54 QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
+PK + KDYK + + V L ++ +++TIV S + + LV DG LK+
Sbjct: 1 EPKIHYRKDYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKIN 60
Query: 114 SIKVNGIELKEGD-YHLDSRHLTLQSP--PNGAFTLEIVTEIYPQKNTSLEGIYKSSGNF 170
I +N +L EG+ Y D+ LT+ S P F I+P+ N +L G+YKS
Sbjct: 61 EISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKSKNII 120
Query: 171 CTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALW 230
+QCEA GFR+ITF+ DRPD+MAKY + ADK YPVLLSNG+ + + GGRH A +
Sbjct: 121 VSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARF 180
Query: 231 EDPFKKPCYLFALVAGQLESRDDIFVTR-SGRKVSLRIWTPAQDLPKTAHAMYSLKAAMK 289
DP KPCYLFA+VAG L+ ++T+ + +KV L +++ + + K A+ LK +M
Sbjct: 181 NDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMA 240
Query: 290 WDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVI 349
+DED FGLEYDL N+VAV DFN+GAMENK LNIFN+ +LAS + + D YA IL V+
Sbjct: 241 FDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVV 300
Query: 350 GHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQ 409
GHEYFH +TGNRVT RDWFQL+LKEGLTV R+ FS +M R++ V LR+ QF +
Sbjct: 301 GHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLE 360
Query: 410 DAGPMAHPVRPHSYI------------KGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQA 457
D+ P++HP+RP SY+ KG+EV+RMY T+LG + ++KG D+Y K++DG
Sbjct: 361 DSSPLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNT 420
Query: 458 VTCEDFFAAMRDA-------NDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQE 510
TCEDF AM A N A +LLW+SQ+GTP + +Y AE + YS+ Q
Sbjct: 421 ATCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQY 480
Query: 511 VPSTPGQPVKEPMFIPVAIGLLN-SSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTK 569
Q K+P+FIP+++GL+N +GK+M + T L +TK
Sbjct: 481 TKPDENQKEKKPLFIPISVGLINPENGKEM--------------------ISQTTLELTK 520
Query: 570 KEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARK 629
+ + FVF++I+ +PIPS+ RG+SAP+ F R+ + + K
Sbjct: 521 ESDTFVFNNIAVKPIPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMK 580
Query: 630 LMLSLVADFQQNKPLVL--------NPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIM 681
+L +F + K L N +F+ + +L D D F + ++LP + I+
Sbjct: 581 QILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHADAGFKSYIVSLPQDRYII 640
Query: 682 DMMEVADPDAVHAVRTFIRKQLASEL-------------KAEFLTTVENNRSTGEYVFNH 728
+ + D D + + +I KQ+ +L KA+ LT + F+
Sbjct: 641 NFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHVD---FDQ 697
Query: 729 HNMARRALKNIALAYLASLEDADIVELALREYKT--ATNMTEQFAALAAIVQKPGKIRDE 786
NM R L+N L+ L+ + +I+ + K+ +N +++A K ++ D+
Sbjct: 698 MNM--RTLRNTLLSLLSKAQYPNILNEIIEHSKSPYPSNWLTSL-SVSAYFDKYFELYDK 754
Query: 787 VLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFC 846
Y + D L++ +W + SD E +++L + D +NPN + ++ F
Sbjct: 755 T----YKLSKDDELLLQEWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFT 810
Query: 847 GSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMI 906
+ H G GYK + E++ + DK NP VA+++ F W + D RQ L ++ +
Sbjct: 811 NNLRRFHDISGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNKLDTKRQELMLNEMNTM 870
Query: 907 MSANGLSENVFE 918
+ +S N+ E
Sbjct: 871 LQEPQISNNLKE 882
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
pdb|3EBH|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With Bestatin
Length = 889
Score = 541 bits (1394), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/911 (34%), Positives = 485/911 (53%), Gaps = 77/911 (8%)
Query: 55 PKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVS 114
PK + KDYK + + V L ++ +++TIV S + + LV DG LK+
Sbjct: 1 PKIHYRKDYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINE 60
Query: 115 IKVNGIELKEGD-YHLDSRHLTLQSP--PNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFC 171
I +N +L EG+ Y D+ LT+ S P F I+P+ N +L G+YKS
Sbjct: 61 ISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKSKNIIV 120
Query: 172 TQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWE 231
+QCEA GFR+ITF+ DRPD+MAKY + ADK YPVLLSNG+ + + GGRH A +
Sbjct: 121 SQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARFN 180
Query: 232 DPFKKPCYLFALVAGQLESRDDIFVTR-SGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKW 290
DP KPCYLFA+VAG L+ ++T+ + +KV L +++ + + K A+ LK +M +
Sbjct: 181 DPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAF 240
Query: 291 DEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIG 350
DED FGLEYDL N+VAV DFN+GAMENK LNIFN+ +LAS + + D YA IL V+G
Sbjct: 241 DEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVG 300
Query: 351 HEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQD 410
HEYFH +TGNRVT RDWFQL+LKEGLTV R+ FS +M R++ V LR+ QF +D
Sbjct: 301 HEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLED 360
Query: 411 AGPMAHPVRPHSYI------------KGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAV 458
+ P++HP+RP SY+ KG+EV+RMY T+LG + ++KG D+Y K++DG
Sbjct: 361 SSPLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNTA 420
Query: 459 TCEDFFAAMRDA-------NDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEV 511
TCEDF AM A N A +LLW+SQ+GTP + +Y AE + YS+ Q
Sbjct: 421 TCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYT 480
Query: 512 PSTPGQPVKEPMFIPVAIGLLN-SSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKK 570
Q K+P+FIP+++GL+N +GK+M + T L +TK+
Sbjct: 481 KPDENQKEKKPLFIPISVGLINPENGKEM--------------------ISQTTLELTKE 520
Query: 571 EEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKL 630
+ FVF++I+ +PIPS+ RG+SAP+ F R+ + + K
Sbjct: 521 SDTFVFNNIAVKPIPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMKQ 580
Query: 631 MLSLVADFQQNKPLVL--------NPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMD 682
+L +F + K L N +F+ + +L D D F + ++LP + I++
Sbjct: 581 ILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHADAGFKSYIVSLPQDRYIIN 640
Query: 683 MMEVADPDAVHAVRTFIRKQLASEL-------------KAEFLTTVENNRSTGEYVFNHH 729
+ D D + + +I KQ+ +L KA+ LT + F+
Sbjct: 641 FVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHVD---FDQM 697
Query: 730 NMARRALKNIALAYLASLEDADIVELALREYKT--ATNMTEQFAALAAIVQKPGKIRDEV 787
NM R L+N L+ L+ + +I+ + K+ +N +++A K ++ D+
Sbjct: 698 NM--RTLRNTLLSLLSKAQYPNILNEIIEHSKSPYPSNWLTSL-SVSAYFDKYFELYDKT 754
Query: 788 LDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCG 847
Y + D L++ +W + SD E +++L + D +NPN + ++ F
Sbjct: 755 ----YKLSKDDELLLQEWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTN 810
Query: 848 SPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIM 907
+ H G GYK + E++ + DK NP VA+++ F W + D RQ L ++ ++
Sbjct: 811 NLRRFHDISGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNKLDTKRQELMLNEMNTML 870
Query: 908 SANGLSENVFE 918
+S N+ E
Sbjct: 871 QEPQISNNLKE 881
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals
Distinct Roles For Malaria M1- And M17-Family
Aminopeptidases
Length = 895
Score = 541 bits (1394), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/911 (34%), Positives = 485/911 (53%), Gaps = 77/911 (8%)
Query: 55 PKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVS 114
PK + KDYK + + V L ++ +++TIV S + + LV DG LK+
Sbjct: 1 PKIHYRKDYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINE 60
Query: 115 IKVNGIELKEGD-YHLDSRHLTLQSP--PNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFC 171
I +N +L EG+ Y D+ LT+ S P F I+P+ N +L G+YKS
Sbjct: 61 ISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKSKNIIV 120
Query: 172 TQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWE 231
+QCEA GFR+ITF+ DRPD+MAKY + ADK YPVLLSNG+ + + GGRH A +
Sbjct: 121 SQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARFN 180
Query: 232 DPFKKPCYLFALVAGQLESRDDIFVTR-SGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKW 290
DP KPCYLFA+VAG L+ ++T+ + +KV L +++ + + K A+ LK +M +
Sbjct: 181 DPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAF 240
Query: 291 DEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIG 350
DED FGLEYDL N+VAV DFN+GAMENK LNIFN+ +LAS + + D YA IL V+G
Sbjct: 241 DEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVG 300
Query: 351 HEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQD 410
HEYFH +TGNRVT RDWFQL+LKEGLTV R+ FS +M R++ V LR+ QF +D
Sbjct: 301 HEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLED 360
Query: 411 AGPMAHPVRPHSYI------------KGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAV 458
+ P++HP+RP SY+ KG+EV+RMY T+LG + ++KG D+Y K++DG
Sbjct: 361 SSPLSHPIRPESYVSMANFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNTA 420
Query: 459 TCEDFFAAMRDA-------NDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEV 511
TCEDF AM A N A +LLW+SQ+GTP + +Y AE + YS+ Q
Sbjct: 421 TCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYT 480
Query: 512 PSTPGQPVKEPMFIPVAIGLLN-SSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKK 570
Q K+P+FIP+++GL+N +GK+M + T L +TK+
Sbjct: 481 KPDENQKEKKPLFIPISVGLINPENGKEM--------------------ISQTTLELTKE 520
Query: 571 EEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKL 630
+ FVF++I+ +PIPS+ RG+SAP+ F R+ + + K
Sbjct: 521 SDTFVFNNIAVKPIPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMKQ 580
Query: 631 MLSLVADFQQNKPLVL--------NPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMD 682
+L +F + K L N +F+ + +L D D F + ++LP + I++
Sbjct: 581 ILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHADAGFKSYIVSLPQDRYIIN 640
Query: 683 MMEVADPDAVHAVRTFIRKQLASEL-------------KAEFLTTVENNRSTGEYVFNHH 729
+ D D + + +I KQ+ +L KA+ LT + F+
Sbjct: 641 FVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHVD---FDQM 697
Query: 730 NMARRALKNIALAYLASLEDADIVELALREYKT--ATNMTEQFAALAAIVQKPGKIRDEV 787
NM R L+N L+ L+ + +I+ + K+ +N +++A K ++ D+
Sbjct: 698 NM--RTLRNTLLSLLSKAQYPNILNEIIEHSKSPYPSNWLTSL-SVSAYFDKYFELYDKT 754
Query: 788 LDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCG 847
Y + D L++ +W + SD E +++L + D +NPN + ++ F
Sbjct: 755 ----YKLSKDDELLLQEWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTN 810
Query: 848 SPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIM 907
+ H G GYK + E++ + DK NP VA+++ F W + D RQ L ++ ++
Sbjct: 811 NLRRFHDISGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNKLDTKRQELMLNEMNTML 870
Query: 908 SANGLSENVFE 918
+S N+ E
Sbjct: 871 QEPQISNNLKE 881
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant
Length = 610
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 32 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 88
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 89 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 147
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 148 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 197
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 198 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 249
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI HE
Sbjct: 250 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHE 296
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 297 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 328
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Sc57461a
Length = 608
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 30 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 86
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 87 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 145
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 146 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 195
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 196 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 247
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI HE
Sbjct: 248 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHE 294
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 295 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 326
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041
pdb|3B7R|L Chain L, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3040
pdb|3B7U|X Chain X, Leukotriene A4 Hydrolase Complexed With Kelatorphan
Length = 616
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 38 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 94
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 95 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 153
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 154 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 203
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 204 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 255
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI HE
Sbjct: 256 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHE 302
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 303 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 334
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide
pdb|3CHP|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (3s)-3-Amino-4-Oxo-4-[(4-Phenylmethoxyphenyl)
Amino]butanoic Acid
pdb|3CHQ|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With N5-[4-(Phenylmethoxy)phenyl]-L-Glutamine
pdb|3CHR|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 4-Amino-N-[4-(Phenylmethoxy)phenyl]-Butanamide
pdb|3CHS|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (2s)-2-Amino-5-[[4-[(2s)-2-Hydroxy-2-Phenyl-
Ethoxy]phenyl]amino]-5-Oxo-Pentanoic Acid
Length = 610
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 32 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 88
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 89 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 147
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 148 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 197
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 198 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 249
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI HE
Sbjct: 250 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHE 296
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 297 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 328
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With
Bestatin.
pdb|2VJ8|A Chain A, Complex Of Human Leukotriene A4 Hydrolase With A
Hydroxamic Acid Inhibitor
pdb|3FTS|A Chain A, Leukotriene A4 Hydrolase In Complex With Resveratrol
pdb|3FTU|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol
pdb|3FTV|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment N-
(Pyridin-3-Ylmethyl)aniline
pdb|3FTW|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragments N-
(Pyridin-3-Ylmethyl)aniline And Acetate
pdb|3FTX|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol And Bestatin
pdb|3FTY|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 3-
(Benzyloxy)pyridin-2-Amine
pdb|3FU0|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(4-
Fluorobenzoyl)pyridine
pdb|3FU3|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(2-
Amino-1,3-Thiazol-4-Yl)phenol
pdb|3FU5|A Chain A, Leukotriene A4 Hydrolase In Complex With (5-Thiophen-2-
Ylthiophen-2-Yl)methylamine
pdb|3FU6|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment (4-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUD|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Methyl-1-(2-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUE|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Chloroindole And Bestatin
pdb|3FUF|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Fluoroindole And Bestatin
pdb|3FUH|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Hydroxyindole And Bestatin
pdb|3FUI|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Benzyl-4-[(2r)-
Pyrrolidin-2-Ylmethoxy]aniline
pdb|3FUJ|A Chain A, Leukotriene A4 Hydrolase In Complex With
5-[2-(1h-Pyrrol-1- Yl)ethoxy]-1h-Indole
pdb|3FUK|A Chain A, Leukotriene A4 Hydrolase In Complex With 1-[2-(1h-Indol-5-
Yloxy)ethyl]piperidine-4-Carboxylic Acid
pdb|3FUM|A Chain A, Leukotriene A4 Hydrolase In Complex With
(R)-Pyridin-4-Yl[4-
(2-Pyrrolidin-1-Ylethoxy)phenyl]methanol
pdb|3FUN|A Chain A, Leukotriene A4 Hydrolase In Complex With {4-[(2r)-
Pyrrolidin-2-Ylmethoxy]phenyl}(4-Thiophen-3-Ylphenyl)
Methanone
pdb|3FH5|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
(2r)-2-[(4- Benzylphenoxy)methyl]pyrrolidine.
pdb|3FH7|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
4-[(2s)-2-{[4-(4-
Chlorophenoxy)phenoxy]methyl}pyrrolidin-1-Yl]butanoate.
pdb|3FH8|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor 1-[2-(4-
Benzylphenoxy)ethyl]pyrrolidine.
pdb|3FHE|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor N-[3-(4-
Benzylphenoxy)propyl]-N-Methyl-Beta-Alanine.
pdb|3FTZ|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment
2-(pyridin-3- Ylmethoxy)aniline
pdb|3FUL|A Chain A, Leukotriene A4 Hydrolase In Complex With
Pyridin-4-Yl[4-(2-Pyrrolidin-
1-Ylethoxy)phenyl]methanone
pdb|4DPR|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Captopril
Length = 611
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 33 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 89
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 90 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 148
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 149 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 198
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 199 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 250
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI HE
Sbjct: 251 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHE 297
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 298 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 329
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase
Length = 610
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 32 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 88
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 89 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 147
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 148 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 197
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 198 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 249
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI HE
Sbjct: 250 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHE 296
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 297 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 328
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate
pdb|3B7T|A Chain A, [e296q]lta4h In Complex With Arg-Ala-Arg Substrate
Length = 616
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 38 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 94
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 95 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 153
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 154 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 203
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 204 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 255
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G MEN L F + +LA ++ S+ VI H+
Sbjct: 256 PYVWGQYDL----LVLPPSFPYGGMENPCLT-FVTPTLLAGDKSLSN--------VIAHQ 302
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 303 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 334
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase
Length = 611
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 83 KTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSP--- 139
+T+ + E + LVLD +DL + + +NG E+K Y L R SP
Sbjct: 33 RTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVK---YALGERQSYKGSPMEI 89
Query: 140 -------PNGAFTLEIVTEIYPQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQ 186
N +EI E P K+++L+ + ++SG +QC+A R I Q
Sbjct: 90 SLPIALSKNQEIVIEISFETSP-KSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQ 148
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKK---------- 236
D P + Y + K L ++ + I G EDP +K
Sbjct: 149 DTPSVKLTYTAEVSVPKELVALM----SAIRDGETPDP------EDPSRKIYKFIQKVPI 198
Query: 237 PCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFG 296
PCYL ALV G LESR + G + +W+ + + K+A+ ++ +K ED+ G
Sbjct: 199 PCYLIALVVGALESR------QIGPRT--LVWSEKEQVEKSAYEFSETESMLKIAEDLGG 250
Query: 297 L----EYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHE 352
+YDL +V P F G M+N L F + +LA ++ S+ VI HE
Sbjct: 251 PYVWGQYDL----LVLPPSFPYGGMQNPCLT-FVTPTLLAGDKSLSN--------VIAHE 297
Query: 353 YFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF 384
H+WTGN VT + W L EG TV+ ++
Sbjct: 298 ISHSWTGNLVTNKTWDHFWLNEGHTVYLERHI 329
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|B Chain B, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|C Chain C, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
Length = 954
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 130/304 (42%), Gaps = 39/304 (12%)
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPF----KKPCYLFA 242
D P A + I + + +SN L++ + G L ED F K YL A
Sbjct: 201 DEPAFKASFSIKIRREPR--HLAISNMPLVKSVTVAEG----LIEDHFDVTVKMSTYLVA 254
Query: 243 LVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLP-KTAHAMYSLKAA---MKWDEDVFGLE 298
+ ES I T+SG KVS+ +P K A Y+L AA +++ ED F +
Sbjct: 255 FIISDFESVSKI--TKSGVKVSVYA------VPDKINQADYALDAAVTLLEFYEDYFSIP 306
Query: 299 YDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWT 358
Y L ++ A+PDF GAMEN L + +L E +S + I + HE H W
Sbjct: 307 YPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWF 366
Query: 359 GNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQ-DAGPMAHP 417
GN VT W L L EG F EF S + ++ D + + + DA +HP
Sbjct: 367 GNLVTMEWWNDLWLNEGFAKF--MEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHP 424
Query: 418 VRPH--------------SYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDF 463
V SY KGA ++ M + L + F+ G+ Y ++H + ED
Sbjct: 425 VSTPVENPAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDL 484
Query: 464 FAAM 467
+ +M
Sbjct: 485 WDSM 488
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
pdb|4E36|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
Length = 967
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 131/303 (43%), Gaps = 31/303 (10%)
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAG 246
D P A + I + + LSN ++ LEGG +E K YL A +
Sbjct: 212 DEPLFKANFSIKIRRESR--HIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVC 269
Query: 247 QLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMK---WDEDVFGLEYDLDL 303
S T SG KVS+ + D H Y+L+A++K + E F + Y L
Sbjct: 270 DFHSLSGF--TSSGVKVSIY---ASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSK 322
Query: 304 FNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVT 363
+++A+PDF GAMEN L + +L P+T+S +D + VI HE H W GN VT
Sbjct: 323 LDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382
Query: 364 CRDWFQLSLKEGLTVFR--------------DQEFSSDMGSRTVKRIADVSK--LRNYQF 407
W + LKEG + D F + K + S+ + +
Sbjct: 383 MEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAET 442
Query: 408 PQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAM 467
P M V SY KGA ++ M K LG + F+KG+ Y K+ + +D ++++
Sbjct: 443 PTQIQEMFDEV---SYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSL 499
Query: 468 RDA 470
++
Sbjct: 500 SNS 502
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human
Endoplasmic Reticulum Aminopeptidase 1 Erap1
Length = 897
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 130/304 (42%), Gaps = 39/304 (12%)
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPF----KKPCYLFA 242
D P A + I + + +SN L++ + G L ED F K YL A
Sbjct: 150 DEPAFKASFSIKIRREPR--HLAISNMPLVKSVTVAEG----LIEDHFDVTVKMSTYLVA 203
Query: 243 LVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLP-KTAHAMYSLKAA---MKWDEDVFGLE 298
+ ES I T+SG KVS+ +P K A Y+L AA +++ ED F +
Sbjct: 204 FIISDFESVSKI--TKSGVKVSVYA------VPDKINQADYALDAAVTLLEFYEDYFSIP 255
Query: 299 YDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWT 358
Y L ++ A+PDF GAMEN L + +L E +S + I + HE H W
Sbjct: 256 YPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWF 315
Query: 359 GNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQ-DAGPMAHP 417
GN VT W L L EG F EF S + ++ D + + + DA +HP
Sbjct: 316 GNLVTMEWWNDLWLNEGFAKF--MEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHP 373
Query: 418 VRPH--------------SYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDF 463
V SY KGA ++ M + L + F+ G+ Y ++H + ED
Sbjct: 374 VSTPVENPAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDL 433
Query: 464 FAAM 467
+ +M
Sbjct: 434 WDSM 437
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
Length = 921
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 141/341 (41%), Gaps = 48/341 (14%)
Query: 159 SLEGIYKSS-----GNF----CTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVL 209
+ G YKS+ G TQ E R D P A + I + +
Sbjct: 122 TFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPR--HLA 179
Query: 210 LSNGNLIERGNLEGGRHYALWEDPF----KKPCYLFALVAGQLESRDDIFVTRSGRKVSL 265
+SN L++ + G L ED F K YL A + ES I T+SG KVS+
Sbjct: 180 ISNMPLVKSVTVAEG----LIEDHFDVTVKMSTYLVAFIISDFESVSKI--TKSGVKVSV 233
Query: 266 RIWTPAQDLP-KTAHAMYSLKAA---MKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKS 321
+P K A Y+L AA +++ ED F + Y L ++ A+PDF GAMEN
Sbjct: 234 YA------VPDKINQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWG 287
Query: 322 LNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRD 381
L + +L E +S + I + HE H W GN VT W L L EG F
Sbjct: 288 LTTYRESALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKF-- 345
Query: 382 QEFSSDMGSRTVKRIADVSKLRNYQFPQ-DAGPMAHPVRPH--------------SYIKG 426
EF S + ++ D + + + DA +HPV SY KG
Sbjct: 346 MEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKG 405
Query: 427 AEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAM 467
A ++ M + L + F+ G+ Y ++H + ED + +M
Sbjct: 406 ACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSM 446
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
pdb|3SE6|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
Length = 967
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 130/303 (42%), Gaps = 31/303 (10%)
Query: 187 DRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAG 246
D P A + I + + LSN ++ LEGG +E K YL A +
Sbjct: 212 DEPLFKANFSIKIRRESR--HIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVC 269
Query: 247 QLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMK---WDEDVFGLEYDLDL 303
S T SG KVS+ + D H Y+L+A++K + E F + Y L
Sbjct: 270 DFHSLSGF--TSSGVKVSIY---ASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSK 322
Query: 304 FNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVT 363
+++A+PDF GAMEN L + +L P+T+S +D + VI HE H W GN VT
Sbjct: 323 LDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382
Query: 364 CRDWFQLSLKEGLTVFR--------------DQEFSSDMGSRTVKRIADVSK--LRNYQF 407
W + L EG + D F + K + S+ + +
Sbjct: 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAET 442
Query: 408 PQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAM 467
P M V SY KGA ++ M K LG + F+KG+ Y K+ + +D ++++
Sbjct: 443 PTQIQEMFDEV---SYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSL 499
Query: 468 RDA 470
++
Sbjct: 500 SNS 502
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 147/368 (39%), Gaps = 56/368 (15%)
Query: 147 EIVTEIYPQKNTSLEGIYKSS---GNF-----CTQCEAEGFRKITFYQDRPDIMAKYKCY 198
E+ +E + L G Y+S GN TQ ++ RK D P + A +
Sbjct: 154 EMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNI- 212
Query: 199 IEADKSLYPVLLSNGNLIERGNLE-GGRHYALWEDP------FKK----PCYLFALVAGQ 247
L+ NL N+ G L EDP F+ YL A + +
Sbjct: 213 ---------TLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSE 263
Query: 248 LESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAA---MKWDEDVFGLEYDLDLF 304
+S ++ + V +RIW + + H MY+L + + + + Y L
Sbjct: 264 FQSVNET----AQNGVLIRIWARPNAIAE-GHGMYALNVTGPILNFFANHYNTSYPLPKS 318
Query: 305 NIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTC 364
+ +A+PDFN GAMEN L + +L P+++S ++ ++ VI HE H W GN VT
Sbjct: 319 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTL 378
Query: 365 RDWFQLSLKEGLTVFRDQEFSSDMGSRT--VKRI---ADVSKLRNYQFPQDAGPMAHPVR 419
W L L EG + + +D T +K + DV ++ + P+ P
Sbjct: 379 AWWNDLWLNEGFASYVEY-LGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAE 437
Query: 420 -------------PHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAA 466
SY KGA V+RM L F++G+ Y Q T D +
Sbjct: 438 EVNTPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEH 497
Query: 467 MRDANDAE 474
++ A DA+
Sbjct: 498 LQKAVDAQ 505
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 147/368 (39%), Gaps = 56/368 (15%)
Query: 147 EIVTEIYPQKNTSLEGIYKSS---GNF-----CTQCEAEGFRKITFYQDRPDIMAKYKCY 198
E+ +E + L G Y+S GN TQ ++ RK D P + A +
Sbjct: 110 EMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNI- 168
Query: 199 IEADKSLYPVLLSNGNLIERGNLE-GGRHYALWEDP------FKK----PCYLFALVAGQ 247
L+ NL N+ G L EDP F+ YL A + +
Sbjct: 169 ---------TLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSE 219
Query: 248 LESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAA---MKWDEDVFGLEYDLDLF 304
+S ++ + V +RIW + + H MY+L + + + + Y L
Sbjct: 220 FQSVNET----AQNGVLIRIWARPNAIAE-GHGMYALNVTGPILNFFANHYNTSYPLPKS 274
Query: 305 NIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTC 364
+ +A+PDFN GAMEN L + +L P+++S ++ ++ VI HE H W GN VT
Sbjct: 275 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTL 334
Query: 365 RDWFQLSLKEGLTVFRDQEFSSDMGSRT--VKRI---ADVSKLRNYQFPQDAGPMAHPVR 419
W L L EG + + +D T +K + DV ++ + P+ P
Sbjct: 335 AWWNDLWLNEGFASYVEY-LGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAE 393
Query: 420 -------------PHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAA 466
SY KGA V+RM L F++G+ Y Q T D +
Sbjct: 394 EVNTPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEH 453
Query: 467 MRDANDAE 474
++ A DA+
Sbjct: 454 LQKAVDAQ 461
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 147/368 (39%), Gaps = 56/368 (15%)
Query: 147 EIVTEIYPQKNTSLEGIYKSS---GNF-----CTQCEAEGFRKITFYQDRPDIMAKYKCY 198
E+ +E + L G Y+S GN TQ ++ RK D P + A +
Sbjct: 111 EMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNI- 169
Query: 199 IEADKSLYPVLLSNGNLIERGNLE-GGRHYALWEDP------FKK----PCYLFALVAGQ 247
L+ NL N+ G L EDP F+ YL A + +
Sbjct: 170 ---------TLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSE 220
Query: 248 LESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAA---MKWDEDVFGLEYDLDLF 304
+S ++ + V +RIW + + H MY+L + + + + Y L
Sbjct: 221 FQSVNET----AQNGVLIRIWARPNAIAE-GHGMYALNVTGPILNFFANHYNTSYPLPKS 275
Query: 305 NIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTC 364
+ +A+PDFN GAMEN L + +L P+++S ++ ++ VI HE H W GN VT
Sbjct: 276 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTL 335
Query: 365 RDWFQLSLKEGLTVFRDQEFSSDMGSRT--VKRI---ADVSKLRNYQFPQDAGPMAHPVR 419
W L L EG + + +D T +K + DV ++ + P+ P
Sbjct: 336 AWWNDLWLNEGFASYVEY-LGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAE 394
Query: 420 -------------PHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAA 466
SY KGA V+RM L F++G+ Y Q T D +
Sbjct: 395 EVNTPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEH 454
Query: 467 MRDANDAE 474
++ A DA+
Sbjct: 455 LQKAVDAQ 462
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 147/368 (39%), Gaps = 56/368 (15%)
Query: 147 EIVTEIYPQKNTSLEGIYKSS---GNF-----CTQCEAEGFRKITFYQDRPDIMAKYKCY 198
E+ +E + L G Y+S GN TQ ++ RK D P + A +
Sbjct: 110 EMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNI- 168
Query: 199 IEADKSLYPVLLSNGNLIERGNLE-GGRHYALWEDP------FKK----PCYLFALVAGQ 247
L+ NL N+ G L EDP F+ YL A + +
Sbjct: 169 ---------TLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSE 219
Query: 248 LESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAA---MKWDEDVFGLEYDLDLF 304
+S ++ + V +RIW + + H MY+L + + + + Y L
Sbjct: 220 FQSVNET----AQNGVLIRIWARPNAIAE-GHGMYALNVTGPILNFFANHYNTSYPLPKS 274
Query: 305 NIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTC 364
+ +A+PDFN GAMEN L + +L P+++S ++ ++ VI H+ H W GN VT
Sbjct: 275 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHQLAHQWFGNLVTL 334
Query: 365 RDWFQLSLKEGLTVFRDQEFSSDMGSRT--VKRI---ADVSKLRNYQFPQDAGPMAHPVR 419
W L L EG + + +D T +K + DV ++ + P+ P
Sbjct: 335 AWWNDLWLNEGFASYVEY-LGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAE 393
Query: 420 -------------PHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAA 466
SY KGA V+RM L F++G+ Y Q T D +
Sbjct: 394 EVNTPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEH 453
Query: 467 MRDANDAE 474
++ A DA+
Sbjct: 454 LQKAVDAQ 461
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 172/415 (41%), Gaps = 36/415 (8%)
Query: 96 VEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQ 155
+ + +VLD L++ +KVNG ++ + D + T+++P + +I +
Sbjct: 25 ITADAGDIVLDAVGLQINWMKVNG---RDTAFTYDGQ--TVRAPGDSQ-PQKIEISFAGK 78
Query: 156 KNTSLEGIY---KSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSN 212
+ SL GIY + +G T EA R++ D P A + + DK +
Sbjct: 79 VSDSLSGIYYAGRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAI---- 134
Query: 213 GNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQ 272
N+ + R ++D + YL + G+ + + R + L I +
Sbjct: 135 SNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKY-----RDIDL-ILASLK 188
Query: 273 DLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLA 332
D+ ++ + + + ++++ E+ FG+ Y L ++++VP+F GAMEN F ++ +
Sbjct: 189 DI-RSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFR-EIYMD 246
Query: 333 SPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGL----------TVFRDQ 382
E ++ VI HE H W G+ VT + W L L E T+F +
Sbjct: 247 IAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEW 306
Query: 383 EFSSDM-GSRTVKRIADVSKLRNYQFP---QDAGPMAHPVRPHSYIKGAEVVRMYKTLLG 438
F D SRT + S + +D ++ SY KGA ++RM + G
Sbjct: 307 SFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAG 366
Query: 439 SQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFL-LWYSQAGTPRLKV 492
+ FRKG+ Y H D + A+ D + + W G P +K+
Sbjct: 367 YEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKL 421
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 172/415 (41%), Gaps = 36/415 (8%)
Query: 96 VEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQ 155
+ + +VLD L++ +KVNG ++ + D + T+++P + +I +
Sbjct: 25 ITADAGDIVLDAVGLQINWMKVNG---RDTAFTYDGQ--TVRAPGDSQ-PQKIEISFAGK 78
Query: 156 KNTSLEGIY---KSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSN 212
+ SL GIY + +G T +A R++ D P A + + DK +
Sbjct: 79 VSDSLSGIYYAGRENGMITTHFQATDARRMFPCVDHPAYKAVFAITVVIDKDYDAI---- 134
Query: 213 GNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQ 272
N+ + R ++D + YL + G+ + + R + L I +
Sbjct: 135 SNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKY-----RDIDL-ILASLK 188
Query: 273 DLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLA 332
D+ ++ + + + ++++ E+ FG+ Y L ++++VP+F GAMEN F ++ +
Sbjct: 189 DI-RSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFR-EIYMD 246
Query: 333 SPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGL----------TVFRDQ 382
E ++ VI HE H W G+ VT + W L L E T+F +
Sbjct: 247 IAENSAVTVKRNSATVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEW 306
Query: 383 EFSSDM-GSRTVKRIADVSKLRNYQFP---QDAGPMAHPVRPHSYIKGAEVVRMYKTLLG 438
F D SRT + S + +D ++ SY KGA ++RM + G
Sbjct: 307 SFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAG 366
Query: 439 SQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFL-LWYSQAGTPRLKV 492
+ FRKG+ Y H D + A+ D + + W G P +K+
Sbjct: 367 YEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKL 421
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13)
pdb|4FYR|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Bestatin
pdb|4FYS|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Angiotensin
Iv
pdb|4FYT|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Amastatin
Length = 903
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 159/422 (37%), Gaps = 77/422 (18%)
Query: 92 VFPRVEGSSSPLVLDGQDL----KLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLE 147
V R G S P +D +L + + + + G +K+ Y +DS F E
Sbjct: 73 VVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSLVKDSQYEMDSE-----------FEGE 121
Query: 148 IVTEIYPQKNTSLEGIYKSS---GNF-----CTQCEAEGFRKITFYQDRPDIMAKYKCYI 199
+ + L G Y+S GN TQ +A RK D P + A++ +
Sbjct: 122 LADD--------LAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITL 173
Query: 200 EADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPF----------KKPCYLFALVAGQLE 249
K L LSN L G L EDP K YL A + +
Sbjct: 174 IHPKDL--TALSNM-------LPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEF- 223
Query: 250 SRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAA---MKWDEDVFGLEYDLDLFNI 306
D ++ V +RIW + H Y+L + + + Y L +
Sbjct: 224 ---DYVEKQASNGVLIRIWARPSAI-AAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQ 279
Query: 307 VAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRD 366
+ +PDFN GAMEN L + +L P ++S ++ ++ VI HE H W GN VT
Sbjct: 280 IGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEW 339
Query: 367 WFQLSLKEGLTVFRDQEFSSDMGSRT-----VKRIADVSKLRNYQFPQDAGPMAHPVR-- 419
W L L EG + + +D T + + DV ++ + P++ P
Sbjct: 340 WNDLWLNEGFASYVEY-LGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEI 398
Query: 420 -----------PHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMR 468
SY KGA V+RM + L F++G+ Y Q + + ++
Sbjct: 399 NTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQ 458
Query: 469 DA 470
+A
Sbjct: 459 EA 460
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|B Chain B, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|C Chain C, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|D Chain D, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
Length = 605
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 125/305 (40%), Gaps = 58/305 (19%)
Query: 99 SSSPLVLDGQDLKLVSI----------KVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEI 148
+ +PL+LD +DL + + KVN +L + D L S+ LT+ +P N
Sbjct: 58 NKAPLILDTRDLVIHRVMAKNSQGQWVKVN-YDLAKRDDVLGSK-LTINTPLNAK----- 110
Query: 149 VTEIY---PQKNTSLEGIY--KSSGN----FCTQCEAEGFRKITFYQDRPDIMAKYKCYI 199
+Y +K T L+ + +++G +Q +A R QD P + Y I
Sbjct: 111 KVRVYYNSTEKATGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYTARI 170
Query: 200 EADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLE-----SRDDI 254
DK L V+ +N E G G ++ + P P YL A+ G LE + I
Sbjct: 171 TTDKDLLAVMSANN---EPGTERDGDYF--FSMPQAIPPYLIAIGVGDLEFKAMSHQTGI 225
Query: 255 FVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNM 314
+ ++ + Q + A MY +W YDL ++ P F
Sbjct: 226 YAESYILDAAVAEFDDTQAMIDKAEQMY---GKYRWGR------YDL----LMLPPSFPF 272
Query: 315 GAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKE 374
G MEN L+ +V A D +++ +I HE H+W+GN VT W L L E
Sbjct: 273 GGMENPRLSFITPTVV------AGDK---SLVNLIAHELAHSWSGNLVTNESWRDLWLNE 323
Query: 375 GLTVF 379
G T +
Sbjct: 324 GFTSY 328
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin
Length = 632
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 178/465 (38%), Gaps = 85/465 (18%)
Query: 73 VDLKFSLGEEKTIVSSKITV----FPRVEGSSSPLVLDGQDLKLVSIKVNG----IELKE 124
DL S+ EK+ +S +T + S L LD L + + ++G ++++
Sbjct: 33 TDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIEQ 92
Query: 125 GDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGN-----FCTQCEAEGF 179
L SR + + N FTL I K T+L+ + +Q EA
Sbjct: 93 RKEPLGSRLVINNASCNDNFTLNIQFRT-TDKCTALQWLNSKQTKGGKPYVFSQLEAIHA 151
Query: 180 RKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCY 239
R + D P + + + IE S PV+ S G IE + + + +E P Y
Sbjct: 152 RSLFPCFDTPSVKSTFTASIE---SPLPVVFS-GIRIEDTSKDTNIYR--FEQKVPIPAY 205
Query: 240 LFALVAGQLES-----RDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDV 294
L + +G L S R ++ T R + W D+ K + +W
Sbjct: 206 LIGIASGDLSSAPIGPRSTVY-TEPFRLKDCQ-WEFENDVEKFIQTAEKIIFEYEWGT-- 261
Query: 295 FGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYF 354
YD+ +V V + G ME+ ++ F + +LA + D VI HE
Sbjct: 262 ----YDI----LVNVDSYPYGGMESPNMT-FATPTLLAHDRSNID--------VIAHELA 304
Query: 355 HNWTGNRVTCRDWFQLSLKEGLTVFRD------------QEFSSDMGSRTVKRIAD---- 398
H+W+GN VT W L EG TV+ + + FS+ +G ++ D
Sbjct: 305 HSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKD 364
Query: 399 -------VSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQG-FRKGMDLYF 450
V L + P DA Y KG ++ +T+LG + F + YF
Sbjct: 365 PERFSTLVQNLNDNTDPDDAFSTV------PYEKGFNLLFHLETILGGKAEFDPFIRHYF 418
Query: 451 KRHDGQAV-------TCEDFFAAMRDANDAEFANFLLWYSQAGTP 488
K+ +++ T +F+ ++ D+ ++ W + G P
Sbjct: 419 KKFAKKSLDTFQFLDTLYEFYPEKKEILDS--VDWETWLYKPGMP 461
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From
Saccharomyces Cerevisiae
pdb|2XPZ|A Chain A, Structure Of Native Yeast Lta4 Hydrolase
Length = 632
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 176/465 (37%), Gaps = 85/465 (18%)
Query: 73 VDLKFSLGEEKTIVSSKITV----FPRVEGSSSPLVLDGQDLKLVSIKVNG----IELKE 124
DL S+ EK+ +S +T + S L LD L + + ++G ++++
Sbjct: 33 TDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIEQ 92
Query: 125 GDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGN-----FCTQCEAEGF 179
L SR + + N FTL I K T+L+ + +Q EA
Sbjct: 93 RKEPLGSRLVINNASCNDNFTLNIQFRT-TDKCTALQWLNSKQTKGGKPYVFSQLEAIHA 151
Query: 180 RKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCY 239
R + D P + + + IE S PV+ S G IE + + + +E P Y
Sbjct: 152 RSLFPCFDTPSVKSTFTASIE---SPLPVVFS-GIRIEDTSKDTNIYR--FEQKVPIPAY 205
Query: 240 LFALVAGQLES-----RDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDV 294
L + +G L S R ++ T R + W D+ K + +W
Sbjct: 206 LIGIASGDLSSAPIGPRSTVY-TEPFRLKDCQ-WEFENDVEKFIQTAEKIIFEYEWGT-- 261
Query: 295 FGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYF 354
YD+ +V V + G ME+ ++ L+ A + + VI HE
Sbjct: 262 ----YDI----LVNVDSYPYGGMESPNMTFATPTLI---------AHDRSNIDVIAHELA 304
Query: 355 HNWTGNRVTCRDWFQLSLKEGLTVFRD------------QEFSSDMGSRTVKRIAD---- 398
H+W+GN VT W L EG TV+ + + FS+ +G ++ D
Sbjct: 305 HSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKD 364
Query: 399 -------VSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQG-FRKGMDLYF 450
V L + P DA Y KG ++ +T+LG + F + YF
Sbjct: 365 PERFSTLVQNLNDNTDPDDAFSTV------PYEKGFNLLFHLETILGGKAEFDPFIRHYF 418
Query: 451 KRHDGQAV-------TCEDFFAAMRDANDAEFANFLLWYSQAGTP 488
K+ +++ T +F+ ++ D+ ++ W + G P
Sbjct: 419 KKFAKKSLDTFQFLDTLYEFYPEKKEILDS--VDWETWLYKPGMP 461
>pdb|3BGV|A Chain A, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase
In Complex With Sah
pdb|3BGV|B Chain B, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase
In Complex With Sah
pdb|3BGV|C Chain C, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase
In Complex With Sah
pdb|3BGV|D Chain D, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase
In Complex With Sah
pdb|3EPP|A Chain A, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase
(Rnmt) In Complex With Sinefungin
pdb|3EPP|B Chain B, Crystal Structure Of Mrna Cap Guanine-N7 Methyltransferase
(Rnmt) In Complex With Sinefungin
Length = 313
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 271 AQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMG-AMENKSLNIFNSKL 329
A + + +Y++K K D +FG +YD +L +V VP+F + + N+ +N KL
Sbjct: 167 ASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKL 226
Query: 330 V 330
V
Sbjct: 227 V 227
>pdb|1TD6|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein
Mp506MPN330 (GI: 1674200)FROM MYCOPLASMA PNEUMONIAE
Length = 306
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 742 AYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIR--DEVLDDFYGKWQHDY 799
A LASL A I+EL L++Y NM KP ++ VL D +
Sbjct: 113 AALASLPAAKIIELVLQDYPNKLNMIHYLLPKTKAFVKPHLLQRLQFVLTD------SEL 166
Query: 800 LVVNKWFALQAMSDIPG 816
L + ++ QA++ IPG
Sbjct: 167 LELKRFSFFQALNQIPG 183
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,066,756
Number of Sequences: 62578
Number of extensions: 1140761
Number of successful extensions: 2577
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2431
Number of HSP's gapped (non-prelim): 42
length of query: 926
length of database: 14,973,337
effective HSP length: 108
effective length of query: 818
effective length of database: 8,214,913
effective search space: 6719798834
effective search space used: 6719798834
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)