Your job contains 1 sequence.
>036605
IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL
TGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISS
SAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHL
QVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ
DEKTNPAKITVKLKKADADQQNSVNVKKSRTSIIAARLNDLEADGQKTITGLHDLESEAA
TASAQNEKKSKKRAASDPDLETTRDVVDGECFTFKENLIT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036605
(340 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147972 - symbol:AT5G11240 "AT5G11240" species... 349 3.2e-31 1
ZFIN|ZDB-GENE-021231-3 - symbol:wdr43 "WD repeat domain 4... 123 0.00016 1
>TAIR|locus:2147972 [details] [associations]
symbol:AT5G11240 "AT5G11240" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0000478 "endonucleolytic
cleavage involved in rRNA processing" evidence=RCA] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 InterPro:IPR007148 Pfam:PF04003
KO:K14546 EMBL:BT046122 IPI:IPI00528831 RefSeq:NP_196685.2
UniGene:At.32283 ProteinModelPortal:B5X503 SMR:B5X503 STRING:B5X503
PaxDb:B5X503 PRIDE:B5X503 EnsemblPlants:AT5G11240.1 GeneID:830994
KEGG:ath:AT5G11240 TAIR:At5g11240 HOGENOM:HOG000006242 OMA:QTEFADI
PhylomeDB:B5X503 ProtClustDB:CLSN2690948 Genevestigator:B5X503
Uniprot:B5X503
Length = 615
Score = 349 (127.9 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 84/286 (29%), Positives = 150/286 (52%)
Query: 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL 60
I ST + ++ K G V Y+C+ + KK++++ GT +L LGT GD+LA+DV
Sbjct: 46 IASTEETNIYT--KVGKGHLSVDYTCMKWLSLEKKKKRKLGTSVLVLGTGGGDVLALDVA 103
Query: 61 TGEMKWKSTGRHPXXXXXXXXXXXXRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISS 120
+G++KW+ + HP ++ G +GM ++ G +IR+FKAS K +SS
Sbjct: 104 SGQLKWRISDCHPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSS 163
Query: 121 SAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHL 180
+ KI AS++++ + + +++ KF+ G ++ V+ ++ K ++++ GE+++
Sbjct: 164 LCVSPDGKILVTASTQLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYI 223
Query: 181 QVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240
VW+ D +K + L++ H PV +D N E G +LA++E GV Y W V +
Sbjct: 224 AVWKTD-GAKKQSASCVLALEHPPVFVDSWGETN-EKGLYVLAISEIGVCYFWYGSNVEE 281
Query: 241 DEKTNPAKITVKLKKADADQQNSVNVKKSRTSII-AARLNDLEADG 285
P K+ + A AD +S+ KS +I AA+L + G
Sbjct: 282 LCNATPTKVAL----ATAD--SSLKPYKSSLPLIFAAKLQGILKPG 321
>ZFIN|ZDB-GENE-021231-3 [details] [associations]
symbol:wdr43 "WD repeat domain 43" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-021231-3 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0001525 GO:GO:0060218 GO:GO:0001570
InterPro:IPR007148 Pfam:PF04003 KO:K14546 CTD:23160
HOVERGEN:HBG060012 EMBL:BC095298 EMBL:AF506230 IPI:IPI00960511
RefSeq:NP_001018176.1 UniGene:Dr.33061 STRING:Q8JHG6 GeneID:317637
KEGG:dre:317637 InParanoid:Q8JHG6 NextBio:20807121 Uniprot:Q8JHG6
Length = 650
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 76/307 (24%), Positives = 124/307 (40%)
Query: 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLA---CGFVG----KKRRK-------ERGTLLLA 46
IW+T +L E+ P + +C+ C V +KRRK E+ LL A
Sbjct: 33 IWNTESKTLQQEYV-PSAHLSAACTCVTWGPCRAVQEVPQRKRRKCDAASSAEQSDLL-A 90
Query: 47 LGTSNGDILAVDVLTGEMKWKSTGRHPXXXXXXXXXXXXRSLHVVGTNGMASEMKSEMGE 106
LGT+ G IL L G++ G H L+ + +E + G+
Sbjct: 91 LGTAAGTILIYSTLKGDLHCTLDGGHSGPVNSVQWHPEDSVLYSGSDDTHIAEWDLKTGK 150
Query: 107 VIREFKASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKF---SDDVGPLQYVSA 163
V ++KA ISS + K+ A +++ LE E KF S V L + +
Sbjct: 151 VCCKWKADRSAISSLCISPDGKMLLSAGMTIKMWDLETKEVYRKFTGHSTMVTTLCFATT 210
Query: 164 ----SDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGT 219
S+G + A + ++ L VW+ K N + ++ P ID + S N +D
Sbjct: 211 RPPDSNGMYFLSGAVH-DRLLSVWQVRSDGKDKNSVVSFTLTDEPQHIDLQTS-NSKDEA 268
Query: 220 VILAVA-ESGVAYSWDLKTVSQDEKTNPAKITVKLKKADADQQNSVNVKKSRTSIIAARL 278
V LAV + G + ++ Q +K P L+ + ++ V V ++ A R
Sbjct: 269 VRLAVVCKDGQLHLFEHFLNGQCKK--PLSPACSLQVSTMKGESPVPVPLLAAALCADRQ 326
Query: 279 NDLEADG 285
N + A G
Sbjct: 327 NLMLAYG 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.360 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 340 328 0.00088 116 3 11 23 0.48 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 615 (65 KB)
Total size of DFA: 221 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.64u 0.12s 30.76t Elapsed: 00:00:02
Total cpu time: 30.64u 0.12s 30.76t Elapsed: 00:00:02
Start: Thu May 9 21:28:44 2013 End: Thu May 9 21:28:46 2013