Query 036605
Match_columns 340
No_of_seqs 548 out of 3722
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 05:33:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 9.1E-36 3.1E-40 263.6 29.8 219 1-242 134-374 (410)
2 3ow8_A WD repeat-containing pr 100.0 1.8E-35 6.1E-40 253.2 29.5 222 1-243 62-285 (321)
3 3ow8_A WD repeat-containing pr 100.0 2.1E-35 7.3E-40 252.7 28.8 213 1-236 106-320 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 1.1E-34 3.8E-39 246.5 32.4 216 9-244 5-224 (304)
5 2ynn_A Coatomer subunit beta'; 100.0 1.5E-34 5.1E-39 245.7 29.2 221 1-244 39-266 (304)
6 4gqb_B Methylosome protein 50; 100.0 6.2E-35 2.1E-39 251.9 26.6 218 1-238 107-332 (344)
7 1vyh_C Platelet-activating fac 100.0 2.6E-34 9E-39 254.3 28.5 213 1-236 176-410 (410)
8 1got_B GT-beta; complex (GTP-b 100.0 1.6E-33 5.6E-38 243.1 31.2 217 1-242 81-306 (340)
9 4ery_A WD repeat-containing pr 100.0 1.4E-33 4.6E-38 240.6 30.3 226 1-246 49-277 (312)
10 1got_B GT-beta; complex (GTP-b 100.0 9E-33 3.1E-37 238.4 29.2 210 1-234 123-340 (340)
11 4g56_B MGC81050 protein; prote 100.0 1.9E-33 6.6E-38 244.1 23.6 218 1-240 119-346 (357)
12 1erj_A Transcriptional repress 100.0 3.7E-32 1.3E-36 239.2 32.0 227 1-242 89-346 (393)
13 4ery_A WD repeat-containing pr 100.0 3.1E-32 1.1E-36 232.1 30.6 206 19-242 21-228 (312)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-31 4.9E-36 231.4 34.1 224 1-239 42-285 (345)
15 2pbi_B Guanine nucleotide-bind 100.0 4.2E-32 1.4E-36 235.5 29.9 221 1-242 90-320 (354)
16 4gqb_B Methylosome protein 50; 100.0 1.9E-32 6.4E-37 236.4 27.4 202 20-241 81-293 (344)
17 3frx_A Guanine nucleotide-bind 100.0 2.7E-32 9.3E-37 233.3 27.5 217 1-238 44-318 (319)
18 3frx_A Guanine nucleotide-bind 100.0 1.1E-31 3.7E-36 229.6 28.7 210 9-242 9-232 (319)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.9E-32 2E-36 233.8 27.2 210 8-237 6-225 (345)
20 1nr0_A Actin interacting prote 100.0 1.1E-31 3.8E-36 249.3 30.5 222 1-241 43-359 (611)
21 3iz6_a 40S ribosomal protein R 100.0 8.3E-32 2.8E-36 235.9 27.6 220 2-241 51-333 (380)
22 1erj_A Transcriptional repress 100.0 1.4E-31 5E-36 235.4 28.3 216 1-237 149-389 (393)
23 2pbi_B Guanine nucleotide-bind 100.0 1.9E-31 6.6E-36 231.3 28.2 197 19-234 152-354 (354)
24 2pm7_B Protein transport prote 100.0 1.6E-31 5.4E-36 226.3 26.0 219 1-237 35-285 (297)
25 2hes_X YDR267CP; beta-propelle 100.0 3.2E-31 1.1E-35 227.8 27.7 221 1-238 38-281 (330)
26 2xzm_R RACK1; ribosome, transl 100.0 5.7E-30 1.9E-34 221.2 34.8 216 1-242 53-290 (343)
27 4g56_B MGC81050 protein; prote 100.0 6.2E-32 2.1E-36 234.7 22.3 204 19-242 92-306 (357)
28 3iz6_a 40S ribosomal protein R 100.0 3.1E-31 1.1E-35 232.3 25.9 230 1-240 92-378 (380)
29 2pm7_B Protein transport prote 100.0 2.8E-30 9.7E-35 218.6 30.9 204 19-238 7-239 (297)
30 2xzm_R RACK1; ribosome, transl 100.0 2.8E-30 9.5E-35 223.1 30.6 203 10-237 14-244 (343)
31 1nr0_A Actin interacting prote 100.0 2.7E-30 9.1E-35 240.0 32.1 216 1-237 174-522 (611)
32 2hes_X YDR267CP; beta-propelle 100.0 2.3E-30 8E-35 222.4 28.9 211 6-238 3-231 (330)
33 3vl1_A 26S proteasome regulato 100.0 1.2E-30 4.2E-35 231.2 28.0 217 1-239 123-367 (420)
34 4e54_B DNA damage-binding prot 100.0 9E-31 3.1E-35 233.5 26.2 207 19-242 117-332 (435)
35 2ymu_A WD-40 repeat protein; u 100.0 1E-30 3.5E-35 241.2 27.3 206 1-234 370-577 (577)
36 3ei3_B DNA damage-binding prot 100.0 9.8E-30 3.4E-34 222.9 29.6 220 2-242 58-287 (383)
37 3jrp_A Fusion protein of prote 100.0 1.7E-29 5.7E-34 220.4 30.9 213 7-239 1-242 (379)
38 3f3f_A Nucleoporin SEH1; struc 100.0 3.6E-30 1.2E-34 221.6 26.2 210 19-242 9-342 (351)
39 3bg1_A Protein SEC13 homolog; 100.0 8.4E-31 2.9E-35 223.8 21.9 218 1-237 39-293 (316)
40 3bg1_A Protein SEC13 homolog; 100.0 3.4E-30 1.2E-34 220.0 25.3 203 19-238 11-248 (316)
41 3k26_A Polycomb protein EED; W 100.0 1.3E-30 4.6E-35 226.3 22.5 214 1-236 99-365 (366)
42 2aq5_A Coronin-1A; WD40 repeat 100.0 6.4E-30 2.2E-34 225.6 25.8 205 19-239 79-301 (402)
43 1gxr_A ESG1, transducin-like e 100.0 9.4E-29 3.2E-33 212.2 32.1 218 1-241 76-300 (337)
44 1sq9_A Antiviral protein SKI8; 100.0 7.7E-30 2.6E-34 224.3 25.4 218 1-242 40-327 (397)
45 3jrp_A Fusion protein of prote 100.0 1.1E-29 3.7E-34 221.6 25.7 221 1-239 37-289 (379)
46 1gxr_A ESG1, transducin-like e 100.0 1E-28 3.5E-33 212.0 31.3 210 1-236 123-336 (337)
47 4aez_A CDC20, WD repeat-contai 100.0 4E-29 1.4E-33 220.4 28.6 215 1-239 117-338 (401)
48 3vl1_A 26S proteasome regulato 100.0 3.6E-30 1.2E-34 228.2 22.0 217 1-240 82-325 (420)
49 3k26_A Polycomb protein EED; W 100.0 7.9E-30 2.7E-34 221.5 23.5 225 1-241 48-322 (366)
50 2ymu_A WD-40 repeat protein; u 100.0 5.5E-29 1.9E-33 229.6 30.4 207 1-235 329-537 (577)
51 3dm0_A Maltose-binding peripla 100.0 7.2E-29 2.5E-33 233.8 31.6 217 1-242 409-637 (694)
52 3dwl_C Actin-related protein 2 100.0 9.6E-31 3.3E-35 228.7 16.5 208 19-240 9-239 (377)
53 4aez_A CDC20, WD repeat-contai 100.0 5.2E-29 1.8E-33 219.7 27.6 219 1-242 160-385 (401)
54 3dwl_C Actin-related protein 2 100.0 2E-30 7E-35 226.6 18.5 212 1-237 37-281 (377)
55 4h5i_A Guanine nucleotide-exch 100.0 2.5E-29 8.4E-34 218.9 24.8 198 20-237 132-343 (365)
56 3dm0_A Maltose-binding peripla 100.0 4.8E-29 1.6E-33 235.0 28.4 207 19-244 380-599 (694)
57 1k8k_C P40, ARP2/3 complex 41 100.0 2.6E-29 8.8E-34 218.9 24.7 225 1-240 78-364 (372)
58 3zwl_B Eukaryotic translation 100.0 9.2E-29 3.2E-33 214.8 27.9 205 19-242 30-254 (369)
59 1r5m_A SIR4-interacting protei 100.0 8.5E-29 2.9E-33 219.2 27.5 221 1-242 72-324 (425)
60 1k8k_C P40, ARP2/3 complex 41 100.0 5.5E-29 1.9E-33 216.8 25.5 213 1-237 34-274 (372)
61 3zwl_B Eukaryotic translation 100.0 2.7E-28 9.1E-33 211.9 29.0 217 1-242 58-309 (369)
62 1sq9_A Antiviral protein SKI8; 100.0 3.2E-29 1.1E-33 220.4 23.2 218 1-238 95-396 (397)
63 3mkq_A Coatomer beta'-subunit; 100.0 6.9E-29 2.4E-33 237.8 27.2 219 1-242 39-264 (814)
64 2j04_B YDR362CP, TAU91; beta p 100.0 7.7E-30 2.6E-34 231.0 19.2 213 1-237 187-428 (524)
65 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-28 6.6E-33 234.7 29.3 212 9-242 5-222 (814)
66 4aow_A Guanine nucleotide-bind 100.0 9.3E-28 3.2E-32 206.5 30.7 213 7-242 28-251 (340)
67 3v7d_B Cell division control p 100.0 2.2E-28 7.5E-33 219.7 27.8 212 1-240 146-384 (464)
68 2pm9_A Protein WEB1, protein t 100.0 6.4E-29 2.2E-33 219.7 23.8 223 1-242 49-299 (416)
69 3ei3_B DNA damage-binding prot 100.0 2.1E-28 7.1E-33 214.4 26.4 220 1-242 100-344 (383)
70 2pm9_A Protein WEB1, protein t 100.0 5.1E-29 1.7E-33 220.4 21.7 219 1-242 93-342 (416)
71 4gga_A P55CDC, cell division c 100.0 1.8E-27 6.2E-32 211.2 31.7 223 1-246 129-362 (420)
72 4ggc_A P55CDC, cell division c 100.0 6.1E-28 2.1E-32 205.7 27.3 218 1-238 49-316 (318)
73 4a11_B DNA excision repair pro 100.0 3.9E-28 1.3E-32 213.8 27.0 224 1-242 27-281 (408)
74 3dw8_B Serine/threonine-protei 100.0 3.2E-28 1.1E-32 217.4 26.7 220 1-241 54-377 (447)
75 3i2n_A WD repeat-containing pr 100.0 3.1E-28 1.1E-32 210.8 25.3 221 1-241 48-295 (357)
76 3i2n_A WD repeat-containing pr 100.0 1.3E-28 4.5E-33 213.1 22.7 221 1-240 94-356 (357)
77 3dw8_B Serine/threonine-protei 100.0 8.5E-28 2.9E-32 214.6 28.3 207 19-242 26-321 (447)
78 4a11_B DNA excision repair pro 100.0 4.2E-28 1.4E-32 213.7 25.7 225 1-242 70-370 (408)
79 3gre_A Serine/threonine-protei 100.0 1.6E-28 5.5E-33 218.9 22.8 220 2-242 48-297 (437)
80 1r5m_A SIR4-interacting protei 100.0 1.4E-28 4.7E-33 217.9 22.2 214 1-236 175-424 (425)
81 3jro_A Fusion protein of prote 100.0 3E-28 1E-32 231.1 24.6 221 1-239 35-287 (753)
82 2xyi_A Probable histone-bindin 100.0 6.3E-28 2.2E-32 214.7 24.6 214 7-237 171-410 (430)
83 2j04_B YDR362CP, TAU91; beta p 100.0 9.9E-29 3.4E-33 223.7 19.5 155 19-185 264-426 (524)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.9E-28 1.7E-32 216.7 23.9 200 20-235 101-337 (450)
85 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-27 7.4E-32 237.3 31.1 157 19-186 613-773 (1249)
86 4aow_A Guanine nucleotide-bind 100.0 4.2E-27 1.4E-31 202.4 28.8 219 1-239 65-339 (340)
87 4e54_B DNA damage-binding prot 100.0 2.8E-28 9.5E-33 217.4 21.0 223 1-242 146-392 (435)
88 3mmy_A MRNA export factor; mRN 100.0 5.7E-27 1.9E-31 203.5 28.8 206 19-242 37-309 (368)
89 3odt_A Protein DOA1; ubiquitin 100.0 4.9E-27 1.7E-31 199.5 27.7 211 1-242 43-260 (313)
90 1pgu_A Actin interacting prote 100.0 1.5E-27 5.1E-32 221.3 25.9 219 1-242 43-288 (615)
91 3jro_A Fusion protein of prote 100.0 1.7E-27 5.7E-32 226.1 26.5 205 19-239 7-240 (753)
92 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-26 4E-31 206.8 30.3 206 1-239 157-367 (435)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 1.3E-27 4.3E-32 210.9 23.6 217 1-239 108-344 (402)
94 3v7d_B Cell division control p 100.0 1E-26 3.4E-31 208.9 29.8 213 1-242 187-426 (464)
95 2xyi_A Probable histone-bindin 100.0 2.9E-27 9.9E-32 210.4 26.0 202 19-238 126-354 (430)
96 3lrv_A PRE-mRNA-splicing facto 100.0 3.2E-27 1.1E-31 203.9 24.7 210 2-235 109-331 (343)
97 2w18_A PALB2, fancn, partner a 100.0 3.3E-27 1.1E-31 197.8 23.6 173 51-235 156-355 (356)
98 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-27 5.1E-32 229.8 24.8 203 19-241 15-246 (902)
99 3sfz_A APAF-1, apoptotic pepti 100.0 3.7E-27 1.3E-31 235.6 28.3 214 1-237 641-913 (1249)
100 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.3E-27 3.2E-31 208.1 27.7 209 1-242 143-353 (445)
101 3odt_A Protein DOA1; ubiquitin 100.0 2.5E-26 8.6E-31 195.1 28.7 204 7-242 94-301 (313)
102 3lrv_A PRE-mRNA-splicing facto 100.0 4.7E-27 1.6E-31 202.8 24.0 216 1-239 62-294 (343)
103 1pgu_A Actin interacting prote 100.0 2.5E-26 8.6E-31 213.1 29.6 214 9-244 6-245 (615)
104 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.5E-26 1.9E-30 203.1 29.8 212 1-242 183-396 (445)
105 4gq1_A NUP37; propeller, trans 100.0 7.4E-27 2.5E-31 205.3 22.8 217 1-236 115-388 (393)
106 1yfq_A Cell cycle arrest prote 100.0 2.4E-26 8E-31 197.9 25.5 199 19-238 9-226 (342)
107 3gre_A Serine/threonine-protei 100.0 9.4E-28 3.2E-32 213.9 16.9 208 19-242 109-364 (437)
108 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-27 2.7E-31 207.9 22.8 214 1-242 197-419 (435)
109 4h5i_A Guanine nucleotide-exch 100.0 1.1E-26 3.6E-31 202.3 22.1 170 1-186 161-342 (365)
110 3mmy_A MRNA export factor; mRN 100.0 8.7E-27 3E-31 202.3 20.5 212 1-236 68-345 (368)
111 3vu4_A KMHSV2; beta-propeller 99.9 6.8E-26 2.3E-30 196.5 25.3 213 1-239 3-273 (355)
112 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.6E-26 8.9E-31 205.5 22.9 202 22-242 5-276 (450)
113 4gga_A P55CDC, cell division c 99.9 3E-25 1E-29 196.9 28.2 215 1-240 173-398 (420)
114 2j04_A TAU60, YPL007P, hypothe 99.9 4.3E-26 1.5E-30 202.9 22.3 207 2-236 69-296 (588)
115 1yfq_A Cell cycle arrest prote 99.9 4.2E-26 1.4E-30 196.3 21.5 218 1-242 37-287 (342)
116 3f3f_A Nucleoporin SEH1; struc 99.9 3.8E-25 1.3E-29 190.2 23.9 171 1-186 37-336 (351)
117 4gq1_A NUP37; propeller, trans 99.9 5.5E-25 1.9E-29 193.4 24.1 194 44-242 103-353 (393)
118 2j04_A TAU60, YPL007P, hypothe 99.9 1.2E-25 4E-30 200.1 19.0 197 19-240 13-257 (588)
119 4ggc_A P55CDC, cell division c 99.9 9.8E-24 3.3E-28 179.6 29.9 149 24-186 28-180 (318)
120 1l0q_A Surface layer protein; 99.9 8.2E-24 2.8E-28 185.6 29.7 215 1-242 16-238 (391)
121 3vu4_A KMHSV2; beta-propeller 99.9 1.8E-24 6.1E-29 187.5 24.9 221 1-240 44-339 (355)
122 2w18_A PALB2, fancn, partner a 99.9 7.2E-25 2.5E-29 183.6 20.5 155 19-185 176-355 (356)
123 3bws_A Protein LP49; two-domai 99.9 5.2E-24 1.8E-28 189.4 25.2 221 1-242 148-395 (433)
124 1l0q_A Surface layer protein; 99.9 2.3E-23 8E-28 182.7 28.6 215 1-242 58-280 (391)
125 2oaj_A Protein SNI1; WD40 repe 99.9 3.5E-24 1.2E-28 206.4 24.4 167 1-186 43-241 (902)
126 3bws_A Protein LP49; two-domai 99.9 1.7E-22 5.9E-27 179.6 28.4 211 1-237 195-432 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-22 6.7E-27 178.3 27.3 211 1-239 163-389 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.1E-22 1.4E-26 176.2 20.9 214 1-240 97-347 (415)
129 2ojh_A Uncharacterized protein 99.9 5E-21 1.7E-25 160.7 21.9 215 1-240 26-261 (297)
130 1pby_B Quinohemoprotein amine 99.9 2.3E-20 7.8E-25 159.9 25.7 218 1-242 15-315 (337)
131 3vgz_A Uncharacterized protein 99.9 4.1E-20 1.4E-24 159.5 27.5 218 1-242 73-308 (353)
132 1nir_A Nitrite reductase; hemo 99.9 3.8E-20 1.3E-24 168.7 25.9 214 1-237 163-402 (543)
133 3u4y_A Uncharacterized protein 99.9 1.1E-19 3.7E-24 155.6 26.4 217 1-240 24-255 (331)
134 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-20 6.7E-25 166.2 18.9 156 20-186 91-277 (434)
135 3u4y_A Uncharacterized protein 99.9 1.8E-19 6.2E-24 154.3 23.5 219 1-238 66-305 (331)
136 1nir_A Nitrite reductase; hemo 99.9 3.7E-19 1.3E-23 162.2 26.5 196 28-242 144-360 (543)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 2.3E-20 7.9E-25 165.7 17.6 202 20-238 35-279 (434)
138 1jmx_B Amine dehydrogenase; ox 99.9 1.4E-19 4.9E-24 155.8 22.1 216 1-242 25-330 (349)
139 1ri6_A Putative isomerase YBHE 99.8 5.2E-19 1.8E-23 151.8 23.4 202 20-236 36-261 (343)
140 1ri6_A Putative isomerase YBHE 99.8 1.5E-18 5.2E-23 148.9 25.3 215 1-236 64-307 (343)
141 3hfq_A Uncharacterized protein 99.8 3.2E-18 1.1E-22 147.6 25.2 218 2-237 23-271 (347)
142 3vgz_A Uncharacterized protein 99.8 5.3E-18 1.8E-22 146.2 26.0 207 1-228 115-335 (353)
143 3hfq_A Uncharacterized protein 99.8 1.2E-17 4E-22 144.0 27.3 217 1-236 67-316 (347)
144 2ecf_A Dipeptidyl peptidase IV 99.8 2.8E-19 9.7E-24 169.6 17.3 194 23-236 110-366 (741)
145 2ecf_A Dipeptidyl peptidase IV 99.8 4.4E-19 1.5E-23 168.3 18.5 200 21-239 36-323 (741)
146 1xfd_A DIP, dipeptidyl aminope 99.8 1E-18 3.4E-23 165.4 20.1 215 1-235 41-342 (723)
147 2ojh_A Uncharacterized protein 99.8 1.8E-18 6.1E-23 145.0 18.6 206 1-228 66-293 (297)
148 2z3z_A Dipeptidyl aminopeptida 99.8 8E-19 2.7E-23 165.6 17.9 194 22-236 82-341 (706)
149 1xfd_A DIP, dipeptidyl aminope 99.8 2.3E-18 7.8E-23 162.9 19.2 219 1-237 95-393 (723)
150 2z3z_A Dipeptidyl aminopeptida 99.8 2.4E-17 8.1E-22 155.6 23.9 199 24-239 183-437 (706)
151 1k32_A Tricorn protease; prote 99.8 1.3E-17 4.4E-22 163.9 20.0 194 21-237 295-502 (1045)
152 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.1E-17 2.4E-21 140.2 21.7 202 22-236 40-290 (365)
153 3scy_A Hypothetical bacterial 99.8 6.2E-16 2.1E-20 134.0 26.4 201 20-236 98-336 (361)
154 3o4h_A Acylamino-acid-releasin 99.8 5.2E-17 1.8E-21 149.9 20.1 204 1-235 48-274 (582)
155 1pby_B Quinohemoprotein amine 99.8 1.4E-16 4.8E-21 136.3 21.4 175 1-192 60-313 (337)
156 1z68_A Fibroblast activation p 99.8 4.5E-18 1.5E-22 160.9 12.9 222 1-239 40-348 (719)
157 3scy_A Hypothetical bacterial 99.7 5.1E-16 1.7E-20 134.5 23.9 213 3-236 35-290 (361)
158 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.7E-16 9.3E-21 136.5 21.9 220 1-238 64-342 (365)
159 1k32_A Tricorn protease; prote 99.7 1.1E-16 3.7E-21 157.3 21.5 209 2-239 364-639 (1045)
160 3pe7_A Oligogalacturonate lyas 99.7 4.1E-16 1.4E-20 136.3 22.1 215 2-240 15-276 (388)
161 1jmx_B Amine dehydrogenase; ox 99.7 3.6E-16 1.2E-20 134.4 20.2 146 26-185 4-173 (349)
162 3o4h_A Acylamino-acid-releasin 99.7 1.7E-16 5.8E-21 146.4 17.5 195 21-241 21-231 (582)
163 1z68_A Fibroblast activation p 99.7 3.7E-17 1.3E-21 154.6 12.7 198 26-240 20-294 (719)
164 4a5s_A Dipeptidyl peptidase 4 99.7 7.5E-16 2.6E-20 146.0 19.5 200 22-239 17-296 (740)
165 3fvz_A Peptidyl-glycine alpha- 99.7 1.4E-14 4.9E-19 123.8 22.5 218 1-237 73-322 (329)
166 4a5s_A Dipeptidyl peptidase 4 99.7 3.2E-15 1.1E-19 141.7 20.0 222 1-241 40-357 (740)
167 1q7f_A NHL, brain tumor CG1071 99.7 1.7E-13 5.8E-18 114.6 27.4 214 2-237 56-280 (286)
168 3dsm_A Uncharacterized protein 99.6 1.7E-13 5.9E-18 117.0 25.4 214 1-242 68-306 (328)
169 3azo_A Aminopeptidase; POP fam 99.6 7.1E-15 2.4E-19 137.6 18.2 198 26-239 81-327 (662)
170 3pe7_A Oligogalacturonate lyas 99.6 8.8E-15 3E-19 127.8 17.4 219 1-239 64-331 (388)
171 3c5m_A Oligogalacturonate lyas 99.6 4.1E-15 1.4E-19 130.1 13.0 219 2-240 15-276 (396)
172 2oiz_A Aromatic amine dehydrog 99.6 1.1E-13 3.7E-18 119.8 21.6 216 1-242 35-341 (361)
173 2dg1_A DRP35, lactonase; beta 99.6 1E-12 3.5E-17 112.3 26.9 202 20-236 43-262 (333)
174 3azo_A Aminopeptidase; POP fam 99.6 3.5E-14 1.2E-18 132.9 18.8 158 20-190 128-326 (662)
175 3no2_A Uncharacterized protein 99.6 1.6E-13 5.4E-18 114.1 20.1 183 44-242 7-200 (276)
176 1qks_A Cytochrome CD1 nitrite 99.6 1.5E-12 5E-17 118.7 27.8 214 1-237 181-421 (567)
177 2gop_A Trilobed protease; beta 99.6 1.2E-13 4.2E-18 118.6 19.7 181 23-237 60-291 (347)
178 3no2_A Uncharacterized protein 99.6 5.9E-13 2E-17 110.6 21.9 171 1-192 19-198 (276)
179 3fvz_A Peptidyl-glycine alpha- 99.6 3.1E-13 1E-17 115.5 20.7 206 21-242 23-282 (329)
180 3c5m_A Oligogalacturonate lyas 99.6 2E-14 6.9E-19 125.7 13.2 212 2-240 65-332 (396)
181 3e5z_A Putative gluconolactona 99.6 3E-12 1E-16 107.6 25.6 196 20-236 26-245 (296)
182 2xdw_A Prolyl endopeptidase; a 99.6 2.6E-13 8.8E-18 128.1 21.0 203 20-240 123-371 (710)
183 2xdw_A Prolyl endopeptidase; a 99.5 1.3E-12 4.5E-17 123.3 24.0 217 1-239 155-416 (710)
184 1rwi_B Serine/threonine-protei 99.5 1.5E-12 5.1E-17 107.7 21.6 200 22-241 67-268 (270)
185 3dsm_A Uncharacterized protein 99.5 4.8E-12 1.6E-16 108.0 24.9 215 1-240 21-256 (328)
186 1qks_A Cytochrome CD1 nitrite 99.5 6.1E-12 2.1E-16 114.7 26.8 188 44-241 169-377 (567)
187 3e5z_A Putative gluconolactona 99.5 3.3E-12 1.1E-16 107.3 22.5 208 2-239 55-288 (296)
188 1q7f_A NHL, brain tumor CG1071 99.5 7.9E-12 2.7E-16 104.4 24.1 197 20-236 28-237 (286)
189 2gop_A Trilobed protease; beta 99.5 4.4E-12 1.5E-16 108.9 18.4 195 2-236 90-330 (347)
190 2mad_H Methylamine dehydrogena 99.5 8.4E-11 2.9E-15 101.9 26.2 216 1-242 51-355 (373)
191 2dg1_A DRP35, lactonase; beta 99.5 8E-11 2.7E-15 100.5 25.6 168 2-185 71-261 (333)
192 2bkl_A Prolyl endopeptidase; m 99.4 5.9E-12 2E-16 118.5 20.1 196 20-236 119-348 (695)
193 2bkl_A Prolyl endopeptidase; m 99.4 8.3E-12 2.8E-16 117.5 20.2 214 1-239 151-399 (695)
194 2oiz_A Aromatic amine dehydrog 99.4 1.7E-11 5.9E-16 106.0 19.5 172 1-190 85-335 (361)
195 1rwi_B Serine/threonine-protei 99.4 3.9E-11 1.3E-15 99.2 20.6 195 23-238 25-223 (270)
196 3g4e_A Regucalcin; six bladed 99.4 4.1E-10 1.4E-14 94.6 25.4 204 22-242 13-234 (297)
197 1xip_A Nucleoporin NUP159; bet 99.4 3E-12 1E-16 110.4 12.3 174 22-223 38-230 (388)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2.3E-10 7.9E-15 96.6 23.2 214 2-237 51-299 (314)
199 1yr2_A Prolyl oligopeptidase; 99.4 5.7E-11 2E-15 112.6 19.9 215 1-239 193-443 (741)
200 3hrp_A Uncharacterized protein 99.3 8.2E-10 2.8E-14 97.0 24.5 194 22-239 131-356 (409)
201 2z2n_A Virginiamycin B lyase; 99.3 3.7E-09 1.3E-13 88.3 26.8 193 20-235 55-253 (299)
202 2z2n_A Virginiamycin B lyase; 99.3 4.2E-09 1.4E-13 88.0 26.8 198 19-239 12-214 (299)
203 1xip_A Nucleoporin NUP159; bet 99.3 5.6E-11 1.9E-15 102.5 15.3 136 20-175 87-233 (388)
204 3hrp_A Uncharacterized protein 99.3 1.6E-09 5.6E-14 95.1 24.7 165 2-185 157-352 (409)
205 1yr2_A Prolyl oligopeptidase; 99.3 1E-10 3.6E-15 110.8 18.3 195 21-236 162-392 (741)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 7.7E-10 2.6E-14 93.4 21.7 203 22-240 18-259 (314)
207 3iuj_A Prolyl endopeptidase; h 99.3 2.6E-10 8.8E-15 107.2 18.6 198 20-238 127-360 (693)
208 2ghs_A AGR_C_1268P; regucalcin 99.2 9.1E-09 3.1E-13 87.5 25.9 193 23-235 50-258 (326)
209 2ece_A 462AA long hypothetical 99.2 3.8E-09 1.3E-13 91.6 22.9 186 44-237 98-352 (462)
210 3c75_H MADH, methylamine dehyd 99.2 5.8E-10 2E-14 97.5 18.0 218 1-242 103-407 (426)
211 3g4e_A Regucalcin; six bladed 99.2 4.6E-09 1.6E-13 88.1 23.1 185 21-226 53-261 (297)
212 3sjl_D Methylamine dehydrogena 99.2 1.3E-09 4.4E-14 93.7 19.5 192 27-238 38-257 (386)
213 2hz6_A Endoplasmic reticulum t 99.2 6.6E-12 2.3E-16 108.9 4.1 180 44-242 11-197 (369)
214 2qc5_A Streptogramin B lactona 99.2 2.8E-08 9.7E-13 82.9 26.4 193 21-235 61-258 (300)
215 3dr2_A Exported gluconolactona 99.2 8E-09 2.7E-13 87.0 22.6 152 21-186 44-223 (305)
216 2qc5_A Streptogramin B lactona 99.2 5.8E-08 2E-12 81.0 26.6 194 20-235 18-216 (300)
217 1mda_H Methylamine dehydrogena 99.2 7.8E-10 2.7E-14 95.1 15.1 214 1-242 50-351 (368)
218 2ghs_A AGR_C_1268P; regucalcin 99.2 1.5E-08 5.2E-13 86.2 23.1 150 21-185 89-258 (326)
219 2qe8_A Uncharacterized protein 99.1 3.7E-08 1.3E-12 84.4 24.2 201 22-238 17-279 (343)
220 2mad_H Methylamine dehydrogena 99.1 3.4E-08 1.2E-12 85.5 22.8 181 44-238 34-244 (373)
221 3iuj_A Prolyl endopeptidase; h 99.1 1.6E-08 5.6E-13 95.0 22.2 213 1-239 159-407 (693)
222 2iwa_A Glutamine cyclotransfer 99.1 3.3E-08 1.1E-12 80.5 20.7 208 7-238 9-238 (266)
223 3sjl_D Methylamine dehydrogena 99.1 1.1E-08 3.8E-13 87.9 18.4 220 1-242 113-368 (386)
224 3c75_H MADH, methylamine dehyd 99.1 1.4E-08 4.7E-13 88.8 18.8 173 52-237 99-295 (426)
225 1fwx_A Nitrous oxide reductase 99.1 4.8E-08 1.7E-12 87.7 22.4 208 2-226 117-407 (595)
226 1npe_A Nidogen, entactin; glyc 99.0 7.7E-07 2.6E-11 73.2 26.4 199 23-242 37-243 (267)
227 2qe8_A Uncharacterized protein 99.0 3.4E-08 1.2E-12 84.6 18.1 157 19-185 64-276 (343)
228 1yiq_A Quinohemoprotein alcoho 99.0 1.3E-07 4.3E-12 88.6 22.9 183 51-242 182-510 (689)
229 1kb0_A Quinohemoprotein alcoho 99.0 1.4E-07 4.8E-12 88.2 22.9 192 44-244 176-514 (677)
230 3dr2_A Exported gluconolactona 99.0 7E-08 2.4E-12 81.2 19.1 190 20-235 84-304 (305)
231 2iwa_A Glutamine cyclotransfer 98.9 1.5E-07 5.3E-12 76.6 19.1 167 2-186 49-236 (266)
232 2ece_A 462AA long hypothetical 98.9 3.6E-07 1.2E-11 79.3 22.3 168 52-225 164-399 (462)
233 3nol_A Glutamine cyclotransfer 98.9 4.5E-07 1.5E-11 73.0 20.7 155 24-197 45-209 (262)
234 1fwx_A Nitrous oxide reductase 98.9 1.9E-07 6.4E-12 83.9 19.5 187 44-237 103-361 (595)
235 1kb0_A Quinohemoprotein alcoho 98.9 2.5E-07 8.5E-12 86.5 20.7 158 26-196 247-514 (677)
236 3hxj_A Pyrrolo-quinoline quino 98.9 1E-07 3.4E-12 80.9 16.0 177 44-239 109-285 (330)
237 2hz6_A Endoplasmic reticulum t 98.9 1.7E-10 5.8E-15 100.0 -1.4 164 2-191 24-194 (369)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.8 1.7E-06 5.7E-11 74.9 23.1 179 44-242 105-301 (376)
239 3hxj_A Pyrrolo-quinoline quino 98.8 3.4E-07 1.1E-11 77.6 17.5 186 23-237 138-324 (330)
240 3mbr_X Glutamine cyclotransfer 98.8 3E-06 1E-10 67.7 21.5 166 8-195 10-185 (243)
241 1yiq_A Quinohemoprotein alcoho 98.8 6.8E-07 2.3E-11 83.7 20.5 158 26-196 239-512 (689)
242 3nok_A Glutaminyl cyclase; bet 98.8 3.2E-06 1.1E-10 68.2 20.7 167 8-197 44-218 (268)
243 3nol_A Glutamine cyclotransfer 98.7 9.8E-07 3.4E-11 71.1 17.4 155 2-175 70-244 (262)
244 1kv9_A Type II quinohemoprotei 98.7 2.9E-06 9.8E-11 79.2 21.3 183 51-242 177-493 (668)
245 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2E-06 6.7E-11 74.5 18.8 189 44-242 55-263 (376)
246 2fp8_A Strictosidine synthase; 98.7 9.2E-06 3.1E-10 68.7 22.6 152 23-186 20-215 (322)
247 2p4o_A Hypothetical protein; p 98.7 5.6E-05 1.9E-09 63.3 27.1 195 22-236 32-241 (306)
248 1mda_H Methylamine dehydrogena 98.7 2.4E-07 8.2E-12 79.6 12.6 175 44-237 34-240 (368)
249 3v65_B Low-density lipoprotein 98.7 3.7E-05 1.3E-09 66.8 26.7 200 22-240 116-321 (386)
250 1ijq_A LDL receptor, low-densi 98.7 9.1E-05 3.1E-09 62.4 28.4 198 22-240 30-241 (316)
251 3qqz_A Putative uncharacterize 98.7 2.2E-05 7.5E-10 63.5 22.9 198 19-235 24-251 (255)
252 3mbr_X Glutamine cyclotransfer 98.6 9.9E-06 3.4E-10 64.7 20.0 155 2-175 48-223 (243)
253 3v64_C Agrin; beta propeller, 98.6 0.00013 4.4E-09 62.4 28.0 199 23-240 74-278 (349)
254 3p5b_L Low density lipoprotein 98.6 0.0002 6.8E-09 62.4 29.2 204 22-242 112-325 (400)
255 2ad6_A Methanol dehydrogenase 98.6 1.6E-05 5.5E-10 72.7 22.6 190 44-242 162-499 (571)
256 3nok_A Glutaminyl cyclase; bet 98.6 1.3E-05 4.3E-10 64.7 18.9 154 2-175 80-254 (268)
257 1npe_A Nidogen, entactin; glyc 98.5 9.8E-05 3.3E-09 60.4 24.3 150 22-185 79-236 (267)
258 3tc9_A Hypothetical hydrolase; 98.5 3E-05 1E-09 68.3 21.9 151 23-186 138-300 (430)
259 2xe4_A Oligopeptidase B; hydro 98.5 1E-05 3.5E-10 76.6 19.8 149 23-185 175-352 (751)
260 1w6s_A Methanol dehydrogenase 98.4 4E-05 1.4E-09 70.2 21.5 109 44-152 168-350 (599)
261 3m0c_C LDL receptor, low-densi 98.4 0.001 3.6E-08 62.9 31.5 215 22-253 424-653 (791)
262 3sov_A LRP-6, low-density lipo 98.4 0.00023 7.9E-09 59.9 24.5 198 23-240 36-241 (318)
263 3v64_C Agrin; beta propeller, 98.4 0.00058 2E-08 58.3 26.1 183 44-237 46-234 (349)
264 2fp8_A Strictosidine synthase; 98.3 0.00022 7.6E-09 60.1 22.1 195 23-237 81-313 (322)
265 1kv9_A Type II quinohemoprotei 98.3 1.6E-05 5.4E-10 74.2 15.8 185 44-241 68-337 (668)
266 4hw6_A Hypothetical protein, I 98.3 0.00028 9.6E-09 62.1 22.5 150 23-186 140-303 (433)
267 1ijq_A LDL receptor, low-densi 98.3 0.00096 3.3E-08 56.1 24.6 183 44-237 3-195 (316)
268 2xe4_A Oligopeptidase B; hydro 98.3 0.00016 5.4E-09 68.5 21.5 151 25-186 224-397 (751)
269 3v65_B Low-density lipoprotein 98.2 0.00044 1.5E-08 60.0 22.0 183 44-237 89-277 (386)
270 1n7d_A LDL receptor, low-densi 98.2 1.2E-05 4.2E-10 75.2 12.9 203 23-241 407-618 (699)
271 1w6s_A Methanol dehydrogenase 98.2 8.1E-05 2.8E-09 68.2 18.0 191 44-242 64-347 (599)
272 3kya_A Putative phosphatase; s 98.2 0.00043 1.5E-08 61.4 21.3 154 23-186 140-340 (496)
273 3amr_A 3-phytase; beta-propell 98.2 0.00065 2.2E-08 57.2 20.9 174 1-185 54-261 (355)
274 1flg_A Protein (quinoprotein e 98.2 0.0008 2.8E-08 61.6 23.3 108 44-152 170-363 (582)
275 1k3i_A Galactose oxidase precu 98.2 5E-05 1.7E-09 70.8 15.5 76 22-107 243-326 (656)
276 4a2l_A BT_4663, two-component 98.1 0.0016 5.6E-08 62.1 25.7 151 21-185 356-524 (795)
277 2p4o_A Hypothetical protein; p 98.1 0.00087 3E-08 56.0 20.0 151 22-185 72-240 (306)
278 3p5b_L Low density lipoprotein 98.1 0.0033 1.1E-07 54.7 24.2 183 44-237 85-277 (400)
279 3s94_A LRP-6, low-density lipo 98.0 0.0043 1.5E-07 57.2 25.4 202 22-241 40-247 (619)
280 2ad6_A Methanol dehydrogenase 98.0 0.00056 1.9E-08 62.5 18.5 189 44-242 64-340 (571)
281 1flg_A Protein (quinoprotein e 98.0 0.0004 1.4E-08 63.6 17.4 161 2-172 296-545 (582)
282 2p9w_A MAL S 1 allergenic prot 98.0 0.0027 9.2E-08 53.0 20.4 152 24-186 15-214 (334)
283 4a0p_A LRP6, LRP-6, low-densit 98.0 0.012 4E-07 54.4 29.4 198 22-240 37-240 (628)
284 3sov_A LRP-6, low-density lipo 97.9 0.0069 2.4E-07 50.8 23.4 149 24-185 81-236 (318)
285 4a2l_A BT_4663, two-component 97.9 0.0032 1.1E-07 60.1 23.1 194 24-238 175-387 (795)
286 3tc9_A Hypothetical hydrolase; 97.9 0.00063 2.1E-08 59.9 16.8 151 75-237 138-301 (430)
287 3m0c_C LDL receptor, low-densi 97.9 0.006 2.1E-07 57.8 24.1 139 44-185 397-544 (791)
288 3amr_A 3-phytase; beta-propell 97.7 0.015 5.1E-07 49.0 21.9 182 44-236 42-262 (355)
289 3v9f_A Two-component system se 97.7 0.0056 1.9E-07 58.3 21.3 151 21-185 362-522 (781)
290 4hw6_A Hypothetical protein, I 97.7 0.0041 1.4E-07 54.7 18.7 152 22-185 182-372 (433)
291 2p9w_A MAL S 1 allergenic prot 97.7 0.0031 1E-07 52.6 16.6 153 75-236 14-214 (334)
292 3qqz_A Putative uncharacterize 97.7 0.014 4.7E-07 47.1 22.7 163 7-184 58-250 (255)
293 3s94_A LRP-6, low-density lipo 97.7 0.034 1.2E-06 51.2 26.7 155 22-186 349-509 (619)
294 1k3i_A Galactose oxidase precu 97.6 0.0013 4.6E-08 61.2 15.3 112 26-146 190-325 (656)
295 2xbg_A YCF48-like protein; pho 97.6 0.023 8E-07 47.8 21.4 191 22-235 122-320 (327)
296 3v9f_A Two-component system se 97.6 0.026 8.9E-07 53.6 23.8 196 21-238 449-657 (781)
297 2vpj_A Kelch-like protein 12; 97.5 0.011 3.6E-07 49.0 18.3 137 44-185 65-229 (301)
298 3ii7_A Kelch-like protein 7; p 97.5 0.02 6.8E-07 47.5 19.7 137 44-185 58-223 (306)
299 3sre_A PON1, serum paraoxonase 97.5 0.036 1.2E-06 47.0 23.2 152 23-186 51-251 (355)
300 1n7d_A LDL receptor, low-densi 97.4 0.00082 2.8E-08 63.0 10.9 177 50-237 384-571 (699)
301 2xzh_A Clathrin heavy chain 1; 97.4 0.041 1.4E-06 45.7 24.0 188 44-242 80-295 (365)
302 2xn4_A Kelch-like protein 2; s 97.3 0.038 1.3E-06 45.7 19.0 137 44-185 64-227 (302)
303 4a0p_A LRP6, LRP-6, low-densit 97.3 0.11 3.8E-06 47.9 28.6 200 22-240 340-552 (628)
304 2xbg_A YCF48-like protein; pho 97.3 0.036 1.2E-06 46.6 18.3 151 20-184 161-319 (327)
305 4asc_A Kelch repeat and BTB do 97.2 0.058 2E-06 44.9 18.7 126 54-185 69-219 (315)
306 2woz_A Kelch repeat and BTB do 97.1 0.085 2.9E-06 44.0 19.2 127 54-185 80-229 (318)
307 3ei3_A DNA damage-binding prot 97.1 0.079 2.7E-06 52.5 21.3 137 44-187 846-999 (1158)
308 3kya_A Putative phosphatase; s 97.1 0.026 9E-07 50.1 16.3 157 76-236 141-340 (496)
309 1bpo_A Protein (clathrin); cla 97.1 0.11 3.9E-06 44.9 24.2 188 44-242 79-294 (494)
310 3a9g_A Putative uncharacterize 97.1 0.057 1.9E-06 46.0 17.8 100 22-132 29-151 (354)
311 2ism_A Putative oxidoreductase 97.0 0.029 1E-06 47.7 15.7 99 22-132 31-151 (352)
312 1zgk_A Kelch-like ECH-associat 97.0 0.049 1.7E-06 45.2 16.4 136 44-185 73-238 (308)
313 2be1_A Serine/threonine-protei 96.9 0.0069 2.4E-07 51.0 10.5 192 44-242 12-236 (339)
314 2vpj_A Kelch-like protein 12; 96.9 0.066 2.3E-06 44.2 16.3 137 44-185 17-182 (301)
315 1tl2_A L10, protein (tachylect 96.8 0.041 1.4E-06 42.9 13.0 144 23-185 42-206 (236)
316 3ei3_A DNA damage-binding prot 96.8 0.2 6.9E-06 49.6 21.0 176 53-237 808-999 (1158)
317 3pbp_A Nucleoporin NUP82; beta 96.7 0.14 4.8E-06 44.2 16.6 102 83-186 30-157 (452)
318 3ii7_A Kelch-like protein 7; p 96.7 0.14 4.8E-06 42.3 16.6 100 44-146 14-129 (306)
319 2xn4_A Kelch-like protein 2; s 96.6 0.14 4.9E-06 42.1 16.1 137 44-185 18-180 (302)
320 1zgk_A Kelch-like ECH-associat 96.4 0.22 7.5E-06 41.2 16.3 136 44-185 27-191 (308)
321 3das_A Putative oxidoreductase 96.3 0.4 1.4E-05 40.5 18.4 142 21-172 31-218 (347)
322 2g8s_A Glucose/sorbosone dehyd 96.3 0.15 5.2E-06 43.3 14.7 101 22-132 18-146 (353)
323 3sre_A PON1, serum paraoxonase 96.1 0.42 1.4E-05 40.5 16.5 121 51-175 138-286 (355)
324 1xi4_A Clathrin heavy chain; a 96.1 0.36 1.2E-05 48.3 17.5 188 44-242 79-294 (1630)
325 1cru_A Protein (soluble quinop 96.1 0.69 2.4E-05 40.7 20.7 102 22-132 27-160 (454)
326 2uvk_A YJHT; unknown function, 96.0 0.43 1.5E-05 40.3 16.3 50 44-94 68-128 (357)
327 1tl2_A L10, protein (tachylect 95.8 0.32 1.1E-05 38.0 12.7 131 44-180 6-156 (236)
328 4asc_A Kelch repeat and BTB do 95.6 0.77 2.6E-05 38.0 20.1 135 44-185 7-172 (315)
329 2ism_A Putative oxidoreductase 95.3 0.63 2.2E-05 39.4 14.5 98 74-174 31-153 (352)
330 3pbp_A Nucleoporin NUP82; beta 95.2 1.4 4.7E-05 38.2 16.0 114 124-241 29-162 (452)
331 2woz_A Kelch repeat and BTB do 95.1 1.1 3.8E-05 37.1 15.3 99 44-146 112-233 (318)
332 3s25_A Hypothetical 7-bladed b 95.0 1.3 4.3E-05 36.7 18.8 136 26-185 108-253 (302)
333 3ott_A Two-component system se 94.9 2.6 8.8E-05 39.8 22.8 146 22-185 63-218 (758)
334 2xzh_A Clathrin heavy chain 1; 94.9 1.5 5E-05 36.6 23.5 181 44-237 38-236 (365)
335 3s25_A Hypothetical 7-bladed b 94.8 1.4 4.8E-05 36.3 17.0 122 52-189 88-216 (302)
336 3a9g_A Putative uncharacterize 94.7 1.7 5.7E-05 36.8 19.7 155 22-186 73-295 (354)
337 2uvk_A YJHT; unknown function, 94.2 1.6 5.6E-05 36.6 14.6 120 52-175 168-325 (357)
338 1bpo_A Protein (clathrin); cla 94.2 2.6 9E-05 36.6 23.8 182 44-237 37-235 (494)
339 2zwa_A Leucine carboxyl methyl 93.8 3.5 0.00012 38.5 16.9 142 44-186 400-576 (695)
340 3das_A Putative oxidoreductase 93.7 2.3 8E-05 35.8 14.0 102 73-174 31-158 (347)
341 3sbq_A Nitrous-oxide reductase 93.4 1.4 4.8E-05 39.5 12.3 108 117-226 324-454 (638)
342 3qhy_B Beta-lactamase inhibito 92.9 2.2 7.4E-05 34.8 12.4 172 51-242 80-251 (282)
343 2g8s_A Glucose/sorbosone dehyd 92.7 1.3 4.5E-05 37.4 11.3 99 75-174 19-148 (353)
344 1xi4_A Clathrin heavy chain; a 92.7 6.8 0.00023 39.7 17.1 136 44-185 37-186 (1630)
345 3qhy_B Beta-lactamase inhibito 92.1 4.1 0.00014 33.1 13.3 188 23-242 25-212 (282)
346 1cru_A Protein (soluble quinop 92.1 5.9 0.0002 34.8 15.5 101 74-175 27-163 (454)
347 2zwa_A Leucine carboxyl methyl 92.0 7.9 0.00027 36.1 16.7 141 44-185 454-633 (695)
348 3ott_A Two-component system se 91.8 8.6 0.00029 36.2 19.5 136 22-171 146-294 (758)
349 3sbq_A Nitrous-oxide reductase 91.0 8.6 0.00029 34.7 20.7 188 44-237 144-408 (638)
350 2wg3_C Hedgehog-interacting pr 88.5 12 0.00041 32.9 13.7 103 22-132 14-155 (463)
351 2wg3_C Hedgehog-interacting pr 86.5 12 0.0004 32.9 12.4 101 75-175 15-158 (463)
352 4gq2_M Nucleoporin NUP120; bet 83.8 17 0.00059 35.3 13.2 38 75-112 237-274 (950)
353 4a9v_A PHOX; hydrolase, beta-p 82.5 5.8 0.0002 35.8 8.5 62 22-92 476-549 (592)
354 3zwu_A Alkaline phosphatase PH 81.1 4.7 0.00016 36.7 7.7 59 24-91 478-548 (592)
355 4fhn_B Nucleoporin NUP120; pro 80.9 16 0.00054 36.4 12.0 38 75-112 239-276 (1139)
356 2be1_A Serine/threonine-protei 73.8 2 6.8E-05 36.1 2.9 70 44-113 58-139 (339)
357 4a9v_A PHOX; hydrolase, beta-p 71.3 27 0.00092 31.6 9.5 58 75-132 477-547 (592)
358 3zwu_A Alkaline phosphatase PH 69.1 19 0.00065 32.7 8.3 58 118-175 478-550 (592)
359 4gq2_M Nucleoporin NUP120; bet 57.7 17 0.00059 35.3 6.2 38 22-68 236-273 (950)
360 3q6k_A 43.2 kDa salivary prote 56.2 94 0.0032 26.4 19.8 160 53-237 124-306 (381)
361 3kci_A Probable E3 ubiquitin-p 52.6 1.1E+02 0.0036 25.9 21.1 192 44-242 64-298 (389)
362 3al9_A Plexin-A2; beta-propell 49.0 60 0.002 29.1 7.9 70 23-99 401-476 (539)
363 3f7f_A Nucleoporin NUP120; nuc 46.1 40 0.0014 31.4 6.3 36 76-113 224-259 (729)
364 4fhn_B Nucleoporin NUP120; pro 46.1 22 0.00076 35.3 5.1 37 23-68 239-275 (1139)
365 1q47_A Semaphorin 3A; beta pro 43.8 86 0.003 27.7 8.0 57 43-99 422-487 (495)
366 3f7f_A Nucleoporin NUP120; nuc 42.8 39 0.0013 31.5 5.7 26 44-69 233-258 (729)
367 3b7f_A Glycosyl hydrolase, BNR 37.2 1.8E+02 0.0063 24.3 15.9 51 44-95 24-77 (394)
368 3nvq_A Semaphorin-7A; beta-pro 33.7 1.4E+02 0.0049 27.1 7.8 57 43-99 381-444 (590)
369 4hvt_A Ritya.17583.B, post-pro 32.1 2.3E+02 0.008 26.4 9.3 31 118-148 131-169 (711)
370 4gz8_A Semaphorin-3A; multi-do 30.7 1.5E+02 0.0052 27.4 7.6 57 43-99 430-495 (667)
371 3ol2_B Plexin-B1; beta-propell 30.5 1.1E+02 0.0037 27.4 6.4 70 23-99 388-461 (528)
372 1olz_A Semaphorin 4D; developm 27.0 2.4E+02 0.0081 26.1 8.2 57 43-99 416-477 (663)
373 3uc1_A DNA gyrase subunit A; D 25.7 2.8E+02 0.0096 22.8 17.7 138 44-185 111-277 (327)
374 3mez_B Mannose-specific lectin 24.9 1.6E+02 0.0054 19.7 11.7 79 44-132 26-104 (113)
375 3q6k_A 43.2 kDa salivary prote 23.8 3.3E+02 0.011 23.0 22.5 163 1-168 127-336 (381)
376 3oky_A Plexin-A2; transmembran 22.1 2.3E+02 0.008 26.2 7.1 57 43-99 413-475 (681)
377 3mvd_K Regulator of chromosome 21.6 3.7E+02 0.013 22.7 21.4 189 41-241 135-378 (423)
378 2fqm_A Phosphoprotein, P prote 21.4 36 0.0012 20.4 1.1 57 283-340 16-72 (75)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.1e-36 Score=263.63 Aligned_cols=219 Identities=16% Similarity=0.207 Sum_probs=196.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.++++...+. +|...|++++|+|+++ +|++|+.||+|++||+.+++.+..+.+ |...|.+++
T Consensus 134 vwd~~~~~~~~~l~----~h~~~V~~v~~~~~~~---------~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~V~~v~ 199 (410)
T 1vyh_C 134 VWDYETGDFERTLK----GHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHG-HDHNVSSVS 199 (410)
T ss_dssp EEETTTCCCCEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSCCCEEETTSSCEEECCCC-CSSCEEEEE
T ss_pred EEECCCCcEEEEEe----ccCCcEEEEEEcCCCC---------EEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCEEEEE
Confidence 69999999998888 8999999999999999 999999999999999999998888888 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v 158 (340)
|+|++..|++++.|+.|++||+.++..+..+.+|...+.++.++|++.++++++.+ |++||+.+++....+..|...|
T Consensus 200 ~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v 279 (410)
T 1vyh_C 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVV 279 (410)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceE
Confidence 99999999999999999999999999999999999999999999999999886554 9999999999999999999999
Q ss_pred EEEEECCC--------------------CCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC
Q 036605 159 QYVSASDG--------------------AKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG 218 (340)
Q Consensus 159 ~~~~~s~~--------------------~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (340)
.+++|+|+ +.+|++++. |+.|++||+ .++.....+. +|...+..+ .| ++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~-D~~i~iwd~--~~~~~~~~~~---~h~~~v~~v--~~-~~~g 350 (410)
T 1vyh_C 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR-DKTIKMWDV--STGMCLMTLV---GHDNWVRGV--LF-HSGG 350 (410)
T ss_dssp EEEEECCSCGGGGGGGCCSCC-------CCEEEEEET-TSEEEEEET--TTTEEEEEEE---CCSSCEEEE--EE-CSSS
T ss_pred EEEEEcCcccccchhhhccccccccCCCCCEEEEEeC-CCeEEEEEC--CCCceEEEEE---CCCCcEEEE--EE-cCCC
Confidence 99999996 668888877 999999998 4444433333 677777666 66 8999
Q ss_pred CEEEEEeCCCcEEEEECCCCCccC
Q 036605 219 TVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 219 ~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+|++++.||.|++||+.+++.+.
T Consensus 351 ~~l~s~s~D~~i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 351 KFILSCADDKTLRVWDYKNKRCMK 374 (410)
T ss_dssp SCEEEEETTTEEEEECCTTSCCCE
T ss_pred CEEEEEeCCCeEEEEECCCCceEE
Confidence 999999999999999998776554
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=253.18 Aligned_cols=222 Identities=15% Similarity=0.211 Sum_probs=193.5
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+++....+... +|...|.+++|+|++. ++++|+.|++|++||+.+++.+..+.. |...+.+++
T Consensus 62 vW~~~~~~~~~~~~l~--gh~~~v~~~~~~~~~~---------~l~s~s~D~~i~lWd~~~~~~~~~~~~-~~~~~~~~~ 129 (321)
T 3ow8_A 62 VWKWRDERLDLQWSLE--GHQLGVVSVDISHTLP---------IAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWTLA 129 (321)
T ss_dssp EEEEETTEEEEEEEEC--CCSSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTTEEEEEEEC-CTTCCCCEE
T ss_pred EEECCCCCeeeeeeec--cCCCCEEEEEECCCCC---------EEEEEeCCCcEEEEECCCCCEEEEEeC-CCccEEEEE
Confidence 5888777654433333 8999999999999999 999999999999999999999888887 888999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v 158 (340)
|+|++++|++++.||.|++|++.+++....+..+...+.+++|+|++++|++++.+ |++||+++++.+..+.+|..+|
T Consensus 130 ~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v 209 (321)
T 3ow8_A 130 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 209 (321)
T ss_dssp ECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC
T ss_pred ECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce
Confidence 99999999999999999999999999998899899999999999999999986554 9999999999999999999999
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.+++|+|++++|++++. |+.|++||++ .+.....+. .|...+..+ .| +|++.+|++++.||.|++||+.++
T Consensus 210 ~~l~~spd~~~l~s~s~-dg~i~iwd~~--~~~~~~~~~---~h~~~v~~~--~~-sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 210 RSLTFSPDSQLLVTASD-DGYIKIYDVQ--HANLAGTLS---GHASWVLNV--AF-CPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CEEEECTTSCEEEEECT-TSCEEEEETT--TCCEEEEEC---CCSSCEEEE--EE-CTTSSEEEEEETTSCEEEEETTTT
T ss_pred eEEEEcCCCCEEEEEcC-CCeEEEEECC--CcceeEEEc---CCCCceEEE--EE-CCCCCEEEEEeCCCcEEEEeCCCC
Confidence 99999999999999877 9999999983 443333332 566666666 66 899999999999999999999887
Q ss_pred CccCC
Q 036605 239 SQDEK 243 (340)
Q Consensus 239 ~~~~~ 243 (340)
+.+..
T Consensus 281 ~~~~~ 285 (321)
T 3ow8_A 281 TCVHT 285 (321)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65553
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=252.71 Aligned_cols=213 Identities=16% Similarity=0.273 Sum_probs=192.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++.+..+. .+...+.+++|+|+++ +|++|+.+|.|++|++.+++....+.. |...|.+++
T Consensus 106 lWd~~~~~~~~~~~----~~~~~~~~~~~spdg~---------~l~~g~~dg~v~i~~~~~~~~~~~~~~-~~~~v~~~~ 171 (321)
T 3ow8_A 106 LWDLENGKQIKSID----AGPVDAWTLAFSPDSQ---------YLATGTHVGKVNIFGVESGKKEYSLDT-RGKFILSIA 171 (321)
T ss_dssp EEETTTTEEEEEEE----CCTTCCCCEEECTTSS---------EEEEECTTSEEEEEETTTCSEEEEEEC-SSSCEEEEE
T ss_pred EEECCCCCEEEEEe----CCCccEEEEEECCCCC---------EEEEEcCCCcEEEEEcCCCceeEEecC-CCceEEEEE
Confidence 69999999988887 6778899999999999 999999999999999999998888887 888999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v 158 (340)
|+|++++|++++.||.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.+ |++||+++++.+..+.+|...|
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 251 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce
Confidence 99999999999999999999999999999999999999999999999999997655 9999999999999999999999
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
.+++|+|++.+|++++. |+.|++||+ .+++....+. .|...+..+ .| ++++.+|++++.||.|++||..
T Consensus 252 ~~~~~sp~~~~l~s~s~-D~~v~iwd~--~~~~~~~~~~---~h~~~v~~v--~~-s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSS-DKSVKVWDV--GTRTCVHTFF---DHQDQVWGV--KY-NGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECTTSSEEEEEET-TSCEEEEET--TTTEEEEEEC---CCSSCEEEE--EE-CTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEECCCCCEEEEEeC-CCcEEEEeC--CCCEEEEEEc---CCCCcEEEE--EE-CCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999888 999999999 4444433333 666667666 66 8999999999999999999963
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.1e-34 Score=246.47 Aligned_cols=216 Identities=13% Similarity=0.066 Sum_probs=181.8
Q ss_pred eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEE
Q 036605 9 LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSL 88 (340)
Q Consensus 9 ~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l 88 (340)
+...|. +|...|++++|+|+++ +|++|+.||+|++||+.++..+..+.. |...|.+++|+|++++|
T Consensus 5 ~~~~~~----~h~~~V~~~~fsp~~~---------~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 70 (304)
T 2ynn_A 5 IKKTFS----NRSDRVKGIDFHPTEP---------WVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKNWI 70 (304)
T ss_dssp CEEEEE----EECSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEE
T ss_pred eEEeec----CCCCceEEEEECCCCC---------EEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCCEE
Confidence 455676 8999999999999999 999999999999999999999989988 99999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCc-eeEEeecCCCCeEEEEECC
Q 036605 89 HVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGE-EVLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 89 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~ 165 (340)
++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.+ |++||++++. ....+.+|...|.+++|+|
T Consensus 71 ~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999987655 9999998874 4467889999999999999
Q ss_pred -CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccCCC
Q 036605 166 -GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDEKT 244 (340)
Q Consensus 166 -~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~ 244 (340)
++.+|++++. |+.|++||++ .... ...+...+...+..+.... .+++.+|++++.||.|++||+.+++.+..+
T Consensus 151 ~~~~~l~sgs~-D~~v~iwd~~--~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~ 224 (304)
T 2ynn_A 151 KDPSTFASGCL-DRTVKVWSLG--QSTP--NFTLTTGQERGVNYVDYYP-LPDKPYMITASDDLTIKIWDYQTKSCVATL 224 (304)
T ss_dssp TCTTEEEEEET-TSEEEEEETT--CSSC--SEEEECCCTTCEEEEEECC-STTCCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeC-CCeEEEEECC--CCCc--cceeccCCcCcEEEEEEEE-cCCCCEEEEEcCCCeEEEEeCCCCccceee
Confidence 5788898887 9999999984 3222 1222223433343332233 468899999999999999999887655533
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-34 Score=245.70 Aligned_cols=221 Identities=14% Similarity=0.156 Sum_probs=189.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.++..+..+. .|...|.+++|+|+++ +|++|+.|++|++||+.+++.+..+.+ |.+.|++++
T Consensus 39 lWd~~~~~~~~~~~----~~~~~v~~~~~~~~~~---------~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~ 104 (304)
T 2ynn_A 39 LWNYETQVEVRSIQ----VTETPVRAGKFIARKN---------WIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIA 104 (304)
T ss_dssp EEETTTTEEEEEEE----CCSSCEEEEEEEGGGT---------EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEE
T ss_pred EEECCCCceeEEee----ccCCcEEEEEEeCCCC---------EEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEE
Confidence 69999999988888 7899999999999999 999999999999999999999999998 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCC-eEEEEeecCCCCeeEEEEcc-CCCEEEEecCc--EEEEECCCCceeEEe-ecCC
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMG-EVIREFKASEKPISSSAFLC-EEKIFALASSE--VRILSLENGEEVLKF-SDDV 155 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~~--i~i~d~~~~~~~~~~-~~~~ 155 (340)
|+|++.+|++|+.|+.|++||+.++ .....+.+|...|.+++|+| ++..+++++.+ |++||+.++.....+ ..|.
T Consensus 105 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~ 184 (304)
T 2ynn_A 105 VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE 184 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCT
T ss_pred EcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCc
Confidence 9999999999999999999999887 45567889999999999999 67888886544 999999888766665 4566
Q ss_pred CCeEEEEECC--CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEE
Q 036605 156 GPLQYVSASD--GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSW 233 (340)
Q Consensus 156 ~~v~~~~~s~--~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vw 233 (340)
..+..+.|+| ++.+|++++. |+.|++||+ .+++....+. +|...+..+ .| +|++.+|++|+.||.|++|
T Consensus 185 ~~v~~~~~~~~~~~~~l~s~s~-D~~i~iWd~--~~~~~~~~~~---~h~~~v~~~--~~-~p~~~~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 185 RGVNYVDYYPLPDKPYMITASD-DLTIKIWDY--QTKSCVATLE---GHMSNVSFA--VF-HPTLPIIISGSEDGTLKIW 255 (304)
T ss_dssp TCEEEEEECCSTTCCEEEEEET-TSEEEEEET--TTTEEEEEEE---CCSSCEEEE--EE-CSSSSEEEEEETTSCEEEE
T ss_pred CcEEEEEEEEcCCCCEEEEEcC-CCeEEEEeC--CCCccceeeC---CCCCCEEEE--EE-CCCCCEEEEEcCCCeEEEE
Confidence 8899999976 6789999888 999999999 4444433333 666666655 56 8999999999999999999
Q ss_pred ECCCCCccCCC
Q 036605 234 DLKTVSQDEKT 244 (340)
Q Consensus 234 d~~~~~~~~~~ 244 (340)
|+.+++....+
T Consensus 256 d~~~~~~~~~~ 266 (304)
T 2ynn_A 256 NSSTYKVEKTL 266 (304)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCceeeec
Confidence 99887665533
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.2e-35 Score=251.88 Aligned_cols=218 Identities=12% Similarity=0.033 Sum_probs=178.8
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++.+..+.....+|...|++++|+|+++ +|++|+.||+|++||+.+++.+..+.+ |.+.|++++
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~---------~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~ 176 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT---------QAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVA 176 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEE
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCC---------EEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEE
Confidence 6999988765433211127999999999999999 999999999999999999999999998 999999999
Q ss_pred EecCCC-EEEEEeCCCcEEEEeCCCCeEEEEee--cCCCCeeEEEEccC-CCEEEEec--CcEEEEECCCCceeEEeecC
Q 036605 81 FAKKGR-SLHVVGTNGMASEMKSEMGEVIREFK--ASEKPISSSAFLCE-EKIFALAS--SEVRILSLENGEEVLKFSDD 154 (340)
Q Consensus 81 ~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~l~~~~~-~~~l~~~~--~~i~i~d~~~~~~~~~~~~~ 154 (340)
|++++. .|++++.|+.|++||+++++....+. .+...+.+++|+|+ +.++++++ +.|++||+++++.+..+.+|
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h 256 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH 256 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC
T ss_pred ecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC
Confidence 999885 78999999999999999998887764 34557899999995 56777754 44999999999999999999
Q ss_pred CCCeEEEEECCCCC-EEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCC-EEEEEeCCCcEEE
Q 036605 155 VGPLQYVSASDGAK-IIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGT-VILAVAESGVAYS 232 (340)
Q Consensus 155 ~~~v~~~~~s~~~~-~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~s~dg~i~v 232 (340)
...|.+++|+|++. +|++++. |++|+|||+ ..++.. ...+|...+..+ .| +|++. +|++++.||.|++
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~-D~~i~vwd~--~~~~~~----~~~~H~~~V~~v--~~-sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSE-DCSLAVLDS--SLSELF----RSQAHRDFVRDA--TW-SPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEET-TSCEEEECT--TCCEEE----EECCCSSCEEEE--EE-CSSSTTEEEEEETTSCEEE
T ss_pred CCCEEEEEEccCCCeEEEEEeC-CCeEEEEEC--CCCcEE----EEcCCCCCEEEE--EE-eCCCCeEEEEEcCCCeEEE
Confidence 99999999999984 6777777 999999998 444322 223787778777 77 77765 5778999999999
Q ss_pred EECCCC
Q 036605 233 WDLKTV 238 (340)
Q Consensus 233 wd~~~~ 238 (340)
|++.+.
T Consensus 327 w~v~~~ 332 (344)
T 4gqb_B 327 HVVPTE 332 (344)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 999764
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-34 Score=254.26 Aligned_cols=213 Identities=13% Similarity=0.163 Sum_probs=191.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++++..+. +|...|++++|+|++. +|++|+.|++|++||+.++..+..+.+ |...|.+++
T Consensus 176 iwd~~~~~~~~~~~----~h~~~V~~v~~~p~~~---------~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~ 241 (410)
T 1vyh_C 176 LWDFQGFECIRTMH----GHDHNVSSVSIMPNGD---------HIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVR 241 (410)
T ss_dssp EEETTSSCEEECCC----CCSSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEE
T ss_pred EEeCCCCceeEEEc----CCCCCEEEEEEeCCCC---------EEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEE
Confidence 69999999888887 8999999999999999 999999999999999999999999988 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccC--------------------CCEEEEecCc--EE
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCE--------------------EKIFALASSE--VR 138 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~--------------------~~~l~~~~~~--i~ 138 (340)
|+|++.+|++|+.|+.|++||+.+++....+..|...|.+++|+|+ +.++++++.+ |+
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence 9999999999999999999999999999999999999999999996 6678886555 99
Q ss_pred EEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC
Q 036605 139 ILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG 218 (340)
Q Consensus 139 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (340)
+||+.++..+..+.+|...|.+++|+|++.+|++++. |+.|++||+ ..++....+. .|...+..+ .| +|++
T Consensus 322 iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~-D~~i~vwd~--~~~~~~~~~~---~h~~~v~~l--~~-~~~~ 392 (410)
T 1vyh_C 322 MWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDY--KNKRCMKTLN---AHEHFVTSL--DF-HKTA 392 (410)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEET-TTEEEEECC--TTSCCCEEEE---CCSSCEEEE--EE-CSSS
T ss_pred EEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEEC--CCCceEEEEc---CCCCcEEEE--EE-cCCC
Confidence 9999999999999999999999999999999999888 999999998 4444444333 677667666 66 8999
Q ss_pred CEEEEEeCCCcEEEEECC
Q 036605 219 TVILAVAESGVAYSWDLK 236 (340)
Q Consensus 219 ~~l~~~s~dg~i~vwd~~ 236 (340)
.+|++|+.||.|++|+++
T Consensus 393 ~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 393 PYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEETTSEEEEEC--
T ss_pred CEEEEEeCCCcEEEEeCC
Confidence 999999999999999863
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-33 Score=243.07 Aligned_cols=217 Identities=13% Similarity=0.164 Sum_probs=186.1
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe----eEEEecCCCCCCe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE----MKWKSTGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~----~~~~~~~~h~~~v 76 (340)
|||..+++....+. .|...|.+++|+|+++ +|++|+.|+.|++|++.+++ ....+.+ |.+.|
T Consensus 81 iWd~~~~~~~~~~~----~~~~~v~~~~~s~~~~---------~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~-h~~~v 146 (340)
T 1got_B 81 IWDSYTTNKVHAIP----LRSSWVMTCAYAPSGN---------YVACGGLDNICSIYNLKTREGNVRVSRELAG-HTGYL 146 (340)
T ss_dssp EEETTTCCEEEEEE----CSSSCEEEEEECTTSS---------EEEEEETTCEEEEEETTTCSBSCEEEEEEEC-CSSCE
T ss_pred EEECCCCCcceEee----cCCccEEEEEECCCCC---------EEEEEeCCCeEEEEECccCCCcceeEEEecC-CCccE
Confidence 69999999888887 7889999999999999 99999999999999998753 4556677 99999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecC
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDD 154 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~ 154 (340)
.++.|++++ .+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.+ |++||++++..+..+.+|
T Consensus 147 ~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h 225 (340)
T 1got_B 147 SCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225 (340)
T ss_dssp EEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred EEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC
Confidence 999999876 58899999999999999999999999999999999999999999886544 999999999999999999
Q ss_pred CCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCC---eeeeeecCCCCCCCCEEEEEeCCCcEE
Q 036605 155 VGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSP---VAIDCKNSPNGEDGTVILAVAESGVAY 231 (340)
Q Consensus 155 ~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~s~dg~i~ 231 (340)
...|.+++|+|++.+|++++. |+.|++||++ .++... ...+.. .+..+ .| +|++.+|++|+.||.|+
T Consensus 226 ~~~v~~v~~~p~~~~l~s~s~-d~~v~iwd~~--~~~~~~----~~~~~~~~~~v~~~--~~-s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 226 ESDINAICFFPNGNAFATGSD-DATCRLFDLR--ADQELM----TYSHDNIICGITSV--SF-SKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEET-TSCEEEEETT--TTEEEE----EECCTTCCSCEEEE--EE-CTTSSEEEEEETTSEEE
T ss_pred cCCEEEEEEcCCCCEEEEEcC-CCcEEEEECC--CCcEEE----EEccCCcccceEEE--EE-CCCCCEEEEECCCCeEE
Confidence 999999999999999999888 9999999984 332211 112222 23333 55 89999999999999999
Q ss_pred EEECCCCCccC
Q 036605 232 SWDLKTVSQDE 242 (340)
Q Consensus 232 vwd~~~~~~~~ 242 (340)
+||+.+.+...
T Consensus 296 vwd~~~~~~~~ 306 (340)
T 1got_B 296 VWDALKADRAG 306 (340)
T ss_dssp EEETTTCCEEE
T ss_pred EEEcccCcEee
Confidence 99998765544
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-33 Score=240.59 Aligned_cols=226 Identities=19% Similarity=0.265 Sum_probs=189.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+++....+. +|...|.+++|+|+++ +|++|+.||.|++||+.+++.+..+.+ |...|.+++
T Consensus 49 iw~~~~~~~~~~~~----~h~~~v~~~~~~~~~~---------~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~ 114 (312)
T 4ery_A 49 IWGAYDGKFEKTIS----GHKLGISDVAWSSDSN---------LLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCN 114 (312)
T ss_dssp EEETTTCCEEEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEE
T ss_pred EEeCCCcccchhhc----cCCCceEEEEEcCCCC---------EEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEE
Confidence 68999998888887 8899999999999999 999999999999999999999989988 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEe-ecCCCC
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKF-SDDVGP 157 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~-~~~~~~ 157 (340)
|+|++++|++++.|+.|++||+.+++.+..+..|..+|.+++|+|++.++++++.+ |++||+++++.+..+ ..+...
T Consensus 115 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 194 (312)
T 4ery_A 115 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 194 (312)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCC
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCc
Confidence 99999999999999999999999999999999999999999999999999886554 999999999887766 455678
Q ss_pred eEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 158 LQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+..++|+|++++|++++. |+.|++||++ .++....+. .|......+...+..+++.+|++|+.||.|++||+.+
T Consensus 195 ~~~~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATL-DNTLKLWDYS--KGKCLKTYT---GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp EEEEEECTTSSEEEEEET-TTEEEEEETT--TTEEEEEEC---SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred eEEEEECCCCCEEEEEcC-CCeEEEEECC--CCcEEEEEE---ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 999999999999999888 9999999983 433322222 3322221111122247789999999999999999988
Q ss_pred CCccCCCCC
Q 036605 238 VSQDEKTNP 246 (340)
Q Consensus 238 ~~~~~~~~p 246 (340)
.+.+..+..
T Consensus 269 ~~~~~~~~~ 277 (312)
T 4ery_A 269 KEIVQKLQG 277 (312)
T ss_dssp CCEEEEECC
T ss_pred chhhhhhhc
Confidence 776654443
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9e-33 Score=238.44 Aligned_cols=210 Identities=18% Similarity=0.228 Sum_probs=180.9
Q ss_pred CccCCCCc----eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCe
Q 036605 1 IWSTNDGS----LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~----~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v 76 (340)
|||+.+++ ....+. +|...|.|+.|++++. +++|+.|++|++||+.+++....+.+ |.+.|
T Consensus 123 iw~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~----------l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v 187 (340)
T 1got_B 123 IYNLKTREGNVRVSRELA----GHTGYLSCCRFLDDNQ----------IVTSSGDTTCALWDIETGQQTTTFTG-HTGDV 187 (340)
T ss_dssp EEETTTCSBSCEEEEEEE----CCSSCEEEEEEEETTE----------EEEEETTSCEEEEETTTTEEEEEECC-CSSCE
T ss_pred EEECccCCCcceeEEEec----CCCccEEEEEECCCCc----------EEEEECCCcEEEEECCCCcEEEEEcC-CCCce
Confidence 57776553 334555 7899999999998877 88999999999999999999989988 99999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec-
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD- 153 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~- 153 (340)
.+++|+|++++|++|+.|+.|++||++++..+..+.+|...|.+++|+|++.++++++.+ |++||+++++.+..+..
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 267 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC
Confidence 999999999999999999999999999999999999999999999999999999987654 99999999887766642
Q ss_pred -CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEE
Q 036605 154 -DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYS 232 (340)
Q Consensus 154 -~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~v 232 (340)
+...|.+++|+|++++|++++. |+.|++||+ ..++....+. +|...+..+ .| +|++.+|++|+.||.|++
T Consensus 268 ~~~~~v~~~~~s~~g~~l~~g~~-d~~i~vwd~--~~~~~~~~~~---~h~~~v~~~--~~-s~dg~~l~s~s~D~~i~i 338 (340)
T 1got_B 268 NIICGITSVSFSKSGRLLLAGYD-DFNCNVWDA--LKADRAGVLA---GHDNRVSCL--GV-TDDGMAVATGSWDSFLKI 338 (340)
T ss_dssp TCCSCEEEEEECTTSSEEEEEET-TSEEEEEET--TTCCEEEEEE---CCSSCEEEE--EE-CTTSSCEEEEETTSCEEE
T ss_pred CcccceEEEEECCCCCEEEEECC-CCeEEEEEc--ccCcEeeEee---cCCCcEEEE--EE-cCCCCEEEEEcCCccEEe
Confidence 3357999999999999999888 999999998 3444333333 677777666 66 899999999999999999
Q ss_pred EE
Q 036605 233 WD 234 (340)
Q Consensus 233 wd 234 (340)
||
T Consensus 339 Wd 340 (340)
T 1got_B 339 WN 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 96
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-33 Score=244.15 Aligned_cols=218 Identities=12% Similarity=0.084 Sum_probs=174.1
Q ss_pred CccCCCCceee--eeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEE
Q 036605 1 IWSTNDGSLLA--EWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 78 (340)
|||+.+++... .+.. .+|...|++++|+|+++ +|++|+.||.|++||+.+++.+..+.+ |.+.|++
T Consensus 119 lWd~~~~~~~~~~~~~~--~~h~~~V~~v~~spdg~---------~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~ 186 (357)
T 4g56_B 119 LWEILEKESLLVNKFAK--YEHDDIVKTLSVFSDGT---------QAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNC 186 (357)
T ss_dssp EC--------CCCCEEE--CCCSSCEEEEEECSSSS---------EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEE
T ss_pred EeeccccceeEEEeecc--CCCCCCEEEEEECCCCC---------EEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEE
Confidence 68988876543 2222 27899999999999999 999999999999999999999999988 9999999
Q ss_pred EEEecCCC-EEEEEeCCCcEEEEeCCCCeEEEEee--cCCCCeeEEEEccCC-CEEEEecC--cEEEEECCCCceeEEee
Q 036605 79 LAFAKKGR-SLHVVGTNGMASEMKSEMGEVIREFK--ASEKPISSSAFLCEE-KIFALASS--EVRILSLENGEEVLKFS 152 (340)
Q Consensus 79 v~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~l~~~~~~-~~l~~~~~--~i~i~d~~~~~~~~~~~ 152 (340)
++|++++. .+++++.|+.|++||+++++....+. .+...+.+++|+|++ .+|++++. .|++||+++++.+..+.
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC
T ss_pred EEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe
Confidence 99999875 78999999999999999988765543 456679999999985 56777544 49999999999999999
Q ss_pred cCCCCeEEEEECCCCC-EEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCC-CCCEEEEEeCCCcE
Q 036605 153 DDVGPLQYVSASDGAK-IIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGE-DGTVILAVAESGVA 230 (340)
Q Consensus 153 ~~~~~v~~~~~s~~~~-~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~s~dg~i 230 (340)
+|...|.+++|+|++. +|++++. |++|+|||+ .+++.. ..++|...+..+ .| +| ++.+|++++.||.|
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~-D~~i~iwd~--~~~~~~----~~~~H~~~V~~v--af-sP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISE-DCTVAVLDA--DFSEVF----RDLSHRDFVTGV--AW-SPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEET-TSCEEEECT--TSCEEE----EECCCSSCEEEE--EE-CSSSTTEEEEEETTSCE
T ss_pred ccceeEEEEEEcCCCCCEEEEEeC-CCEEEEEEC--CCCcEe----EECCCCCCEEEE--EE-eCCCCCEEEEEcCCCeE
Confidence 9999999999999874 6777776 999999998 444332 223677777777 77 66 78999999999999
Q ss_pred EEEECCCCCc
Q 036605 231 YSWDLKTVSQ 240 (340)
Q Consensus 231 ~vwd~~~~~~ 240 (340)
++|++....+
T Consensus 337 ~iW~~~~~~~ 346 (357)
T 4g56_B 337 LHHHLPSEGR 346 (357)
T ss_dssp EEEECC----
T ss_pred EEEECCCCCc
Confidence 9999976433
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-32 Score=239.23 Aligned_cols=227 Identities=16% Similarity=0.228 Sum_probs=183.0
Q ss_pred CccCCCCceeeeeeCCCC--------------CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEE
Q 036605 1 IWSTNDGSLLAEWKQPDG--------------EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKW 66 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~--------------~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~ 66 (340)
||+..+|+.+..+..... .+...|++++|+|+++ +|++|+.||.|++||+.+++...
T Consensus 89 i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~---------~l~s~~~d~~i~iwd~~~~~~~~ 159 (393)
T 1erj_A 89 VYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK---------FLATGAEDRLIRIWDIENRKIVM 159 (393)
T ss_dssp EEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC---------EEEEEcCCCeEEEEECCCCcEEE
Confidence 588888888776652100 1223499999999999 99999999999999999999888
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEcc-CCCEEEEecCc--EEEEECC
Q 036605 67 KSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLC-EEKIFALASSE--VRILSLE 143 (340)
Q Consensus 67 ~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~~--i~i~d~~ 143 (340)
.+.+ |...|.+++|+|++..|++++.|+.|++||+.+++....+. +...+.+++++| ++.++++++.+ |++||++
T Consensus 160 ~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~ 237 (393)
T 1erj_A 160 ILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 237 (393)
T ss_dssp EECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETT
T ss_pred EEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 8888 99999999999999999999999999999999998877775 456799999999 89999886544 9999999
Q ss_pred CCceeEEe-------ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCcc------CC-ceeeecCCCeeeee
Q 036605 144 NGEEVLKF-------SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVN------KG-PALSMRHSPVAIDC 209 (340)
Q Consensus 144 ~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~------~~-~~~~~~~~~~~~~~ 209 (340)
+++.+..+ .+|...|.+++|+|++.+|++++. |+.|++||++....... .. .....+|...+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 316 (393)
T 1erj_A 238 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL-DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 316 (393)
T ss_dssp TCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET-TSEEEEEEC---------------CEEEEEECCSSCEEEE
T ss_pred CCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC-CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEE
Confidence 99877666 578899999999999999999888 99999999852211000 00 11122566666655
Q ss_pred ecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 210 KNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 210 ~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+ ++++.+|++|+.||.|++||+.+++.+.
T Consensus 317 --~~-~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 317 --AT-TQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp --EE-CGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred --EE-CCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 56 7899999999999999999998876554
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-32 Score=232.14 Aligned_cols=206 Identities=16% Similarity=0.224 Sum_probs=180.3
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
+|...|++++|+|+++ +|++|+.||.|++|++.+++....+.+ |...|.+++|+|++++|++++.|+.|+
T Consensus 21 gh~~~v~~~~~s~~~~---------~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccCCcEEEEEECCCCC---------EEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 8999999999999999 999999999999999999998888888 999999999999999999999999999
Q ss_pred EEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcC
Q 036605 99 EMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYG 176 (340)
Q Consensus 99 ~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 176 (340)
+||+.+++.+..+..|...|.+++|+|++.++++++.+ |++||+++++.+..+..|..+|.+++|+|++.+|++++.
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 169 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY- 169 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC-
Confidence 99999999999999999999999999999999986554 999999999999999999999999999999999999888
Q ss_pred CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 177 EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 177 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
|+.|++||++ .++....+ ...+...+..+ .+ +|++.+|++++.||.|++||+.+++.+.
T Consensus 170 d~~i~~wd~~--~~~~~~~~--~~~~~~~~~~~--~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 170 DGLCRIWDTA--SGQCLKTL--IDDDNPPVSFV--KF-SPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp TSCEEEEETT--TCCEEEEE--CCSSCCCEEEE--EE-CTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred CCcEEEEECC--CCceeeEE--eccCCCceEEE--EE-CCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 9999999984 33322211 11233333333 44 8999999999999999999998765444
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=231.36 Aligned_cols=224 Identities=12% Similarity=0.139 Sum_probs=179.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCCCeEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~ 78 (340)
|||+.++......... .+|...|++++|+|+++ +|++|+.|++|++||+..+. ....+.+ |.+.|.+
T Consensus 42 iw~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~g~---------~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~ 110 (345)
T 3fm0_A 42 IWGTEGDSWICKSVLS-EGHQRTVRKVAWSPCGN---------YLASASFDATTCIWKKNQDDFECVTTLEG-HENEVKS 110 (345)
T ss_dssp EEEEETTEEEEEEEEC-SSCSSCEEEEEECTTSS---------EEEEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEE
T ss_pred EEEcCCCcceeeeeec-cccCCcEEEEEECCCCC---------EEEEEECCCcEEEEEccCCCeEEEEEccC-CCCCceE
Confidence 5888777644322111 27999999999999999 99999999999999998774 4667777 9999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCCCCe---EEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCce--eEEe
Q 036605 79 LAFAKKGRSLHVVGTNGMASEMKSEMGE---VIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEE--VLKF 151 (340)
Q Consensus 79 v~~~~~~~~l~s~~~dg~i~~wd~~~~~---~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~--~~~~ 151 (340)
++|+|++++|++++.|+.|++||+.++. .+..+..|...|.+++|+|++.+|++++.+ |++||+.++.. ...+
T Consensus 111 v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATL 190 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe
Confidence 9999999999999999999999998763 455677899999999999999999886554 99999988753 4678
Q ss_pred ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCC-----------ceeeecCCCeeeeeecCCCCCCCCE
Q 036605 152 SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKG-----------PALSMRHSPVAIDCKNSPNGEDGTV 220 (340)
Q Consensus 152 ~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (340)
.+|...|.+++|+|++++|++++. |+.|+||+........... ..+...|...+..+ .| ++++..
T Consensus 191 ~~h~~~v~~l~~sp~g~~l~s~s~-D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v--~~-~~~~~~ 266 (345)
T 3fm0_A 191 EGHESTVWSLAFDPSGQRLASCSD-DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDI--AW-CQLTGA 266 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET-TSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEE--EE-CTTTCC
T ss_pred cCCCCceEEEEECCCCCEEEEEeC-CCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEE--EE-ecCCCE
Confidence 899999999999999999999888 9999999974322111100 01111244555555 56 788999
Q ss_pred EEEEeCCCcEEEEECCCCC
Q 036605 221 ILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 221 l~~~s~dg~i~vwd~~~~~ 239 (340)
|++++.|+.|++|+.....
T Consensus 267 l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 267 LATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEEEETTSCEEEEEECTTS
T ss_pred EEEEeCCCeEEEEEeCCCC
Confidence 9999999999999987643
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.2e-32 Score=235.46 Aligned_cols=221 Identities=11% Similarity=0.104 Sum_probs=183.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC------eeEEEecCCCCC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG------EMKWKSTGRHPG 74 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~------~~~~~~~~~h~~ 74 (340)
|||..++.....+. .|...|.+++|+|++. +|++|+.|+.+.+|++... .....+.. |.+
T Consensus 90 vWd~~~~~~~~~~~----~~~~~v~~~~~sp~g~---------~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~-h~~ 155 (354)
T 2pbi_B 90 VWDSFTTNKEHAVT----MPCTWVMACAYAPSGC---------AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-HTN 155 (354)
T ss_dssp EEETTTCCEEEEEE----CSSSCCCEEEECTTSS---------EEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE-CSS
T ss_pred EEECCCCCcceEEe----cCCCCEEEEEECCCCC---------EEEEeeCCCCEEEEEEeccccccccccceeeec-cCC
Confidence 69999998888877 6788999999999999 9999999999999998643 23445555 999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEcc--CCCEEEEecC--cEEEEECCCCceeEE
Q 036605 75 GLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLC--EEKIFALASS--EVRILSLENGEEVLK 150 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~--~i~i~d~~~~~~~~~ 150 (340)
.|.+++|+|++..|++++.|+.|++||+.+++.+..+.+|...|.+++++| ++.++++++. .|++||+++++.+..
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999999999999999999999999999999999999999999999999988 4678888654 499999999999999
Q ss_pred eecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcE
Q 036605 151 FSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVA 230 (340)
Q Consensus 151 ~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i 230 (340)
+..|...|.+++|+|++.+|++++. |++|++||++ .......+. ...+...+..+ .| ++++.+|++|+.||.|
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~-D~~v~lwd~~--~~~~~~~~~-~~~~~~~~~~~--~~-s~~g~~l~~g~~d~~i 308 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSD-DATCRLYDLR--ADREVAIYS-KESIIFGASSV--DF-SLSGRLLFAGYNDYTI 308 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETT--TTEEEEEEC-CTTCCSCEEEE--EE-CTTSSEEEEEETTSCE
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeC-CCeEEEEECC--CCcEEEEEc-CCCcccceeEE--EE-eCCCCEEEEEECCCcE
Confidence 9999999999999999999999888 9999999984 322211111 00111122222 44 8999999999999999
Q ss_pred EEEECCCCCccC
Q 036605 231 YSWDLKTVSQDE 242 (340)
Q Consensus 231 ~vwd~~~~~~~~ 242 (340)
++||+.++..+.
T Consensus 309 ~vwd~~~~~~~~ 320 (354)
T 2pbi_B 309 NVWDVLKGSRVS 320 (354)
T ss_dssp EEEETTTCSEEE
T ss_pred EEEECCCCceEE
Confidence 999998776544
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=236.40 Aligned_cols=202 Identities=8% Similarity=0.001 Sum_probs=165.1
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEE----ecCCCCCCeEEEEEecCCCEEEEEeCCC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWK----STGRHPGGLAGLAFAKKGRSLHVVGTNG 95 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~----~~~~h~~~v~~v~~~~~~~~l~s~~~dg 95 (340)
+...|.+++|+|+++ |++|+.||+|+|||+.+++.... +.+ |.+.|++++|+|++++|++|+.|+
T Consensus 81 ~~~~v~~~~~s~d~~----------l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-H~~~V~~v~~spdg~~l~sgs~d~ 149 (344)
T 4gqb_B 81 TEAGVADLTWVGERG----------ILVASDSGAVELWELDENETLIVSKFCKYE-HDDIVSTVSVLSSGTQAVSGSKDI 149 (344)
T ss_dssp ESSCEEEEEEETTTE----------EEEEETTSEEEEEEECTTSSCEEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCCEEEEEEeCCCe----------EEEEECCCEEEEEeccCCCceeEeeccccC-CCCCEEEEEECCCCCEEEEEeCCC
Confidence 456799999999866 88999999999999998874433 335 999999999999999999999999
Q ss_pred cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEec--CcEEEEECCCCceeEEe--ecCCCCeEEEEECCCC-CE
Q 036605 96 MASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALAS--SEVRILSLENGEEVLKF--SDDVGPLQYVSASDGA-KI 169 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~--~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~s~~~-~~ 169 (340)
.|++||+.+++.+..+.+|...|.+++|+|++. ++++++ +.|++||+++++....+ ..|...+.+++|+|++ .+
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 229 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV 229 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcc
Confidence 999999999999999999999999999999985 666654 45999999999888776 3455678999999865 56
Q ss_pred EEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC-CEEEEEeCCCcEEEEECCCCCcc
Q 036605 170 IITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG-TVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 170 l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
|++++. |+.|++||+ .+++....+. .|...+..+ .| +|++ .+|++|+.||.|+|||+.+++..
T Consensus 230 l~sg~~-dg~v~~wd~--~~~~~~~~~~---~h~~~v~~v--~f-sp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 230 FVFGDE-NGTVSLVDT--KSTSCVLSSA---VHSQCVTGL--VF-SPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp EEEEET-TSEEEEEES--CC--CCEEEE---CCSSCEEEE--EE-CSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred eEEecc-CCcEEEEEC--CCCcEEEEEc---CCCCCEEEE--EE-ccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 667666 999999999 4454444443 677777766 66 7777 57899999999999999876543
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-32 Score=233.32 Aligned_cols=217 Identities=17% Similarity=0.211 Sum_probs=176.5
Q ss_pred CccCCC-----CceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCC
Q 036605 1 IWSTND-----GSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~-----g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~ 75 (340)
|||+.. +..+..+. +|...|++++|+|+++ +|++|+.|++|++||+.+++....+.+ |.+.
T Consensus 44 ~W~~~~~~~~~~~~~~~~~----~h~~~v~~~~~s~dg~---------~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~ 109 (319)
T 3frx_A 44 SWKLTGDDQKFGVPVRSFK----GHSHIVQDCTLTADGA---------YALSASWDKTLRLWDVATGETYQRFVG-HKSD 109 (319)
T ss_dssp EEEEEEETTEEEEEEEEEE----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTTEEEEEEEC-CSSC
T ss_pred EecCCCCCccccccceEEe----CCcccEEEEEECCCCC---------EEEEEeCCCEEEEEECCCCCeeEEEcc-CCCc
Confidence 476643 23345666 8999999999999999 999999999999999999999999998 9999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCC------CEEEEecCc--EEEEECCCCce
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEE------KIFALASSE--VRILSLENGEE 147 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~------~~l~~~~~~--i~i~d~~~~~~ 147 (340)
|.+++|+|++..|++++.|+.|++||+. +..+..+.+|...+.++.++|.+ ..+++++.+ |++||+.+++.
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 9999999999999999999999999997 55677888899999999999854 477775544 99999999988
Q ss_pred eEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCce-------eee--------------------
Q 036605 148 VLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPA-------LSM-------------------- 200 (340)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~-------------------- 200 (340)
...+.+|...|.+++|+|++++|++++. |+.|++||++ .++....+. +.+
T Consensus 189 ~~~~~~h~~~v~~~~~sp~g~~l~s~~~-dg~i~iwd~~--~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~ 265 (319)
T 3frx_A 189 EADFIGHNSNINTLTASPDGTLIASAGK-DGEIMLWNLA--AKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSL 265 (319)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEET-TCEEEEEETT--TTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEE
T ss_pred heeecCCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECC--CCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEe
Confidence 8999999999999999999999999888 9999999984 322111000 000
Q ss_pred ------------------cCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 201 ------------------RHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 201 ------------------~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.+...+..+ .| +|+|.+|++|+.||.|++||+.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~-spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 266 DPQYLVDDLRPEFAGYSKAAEPHAVSL--AW-SADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp TTEEEEEEECCCCTTCCGGGCCCEEEE--EE-CTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CcCeeeeccCccccccccCcCcceeEE--EE-CCCCCEEEEeecCceEEEEEEeec
Confidence 011112222 45 899999999999999999998653
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-31 Score=229.61 Aligned_cols=210 Identities=14% Similarity=0.170 Sum_probs=177.9
Q ss_pred eeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccC-----CeeEEEecCCCCCCeEEEEEe
Q 036605 9 LLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLT-----GEMKWKSTGRHPGGLAGLAFA 82 (340)
Q Consensus 9 ~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~-----~~~~~~~~~~h~~~v~~v~~~ 82 (340)
+..++. +|...|++++|+|++ + +|++|+.|++|++|++.. +..+..+.+ |...|.+++|+
T Consensus 9 l~~~l~----gH~~~V~~l~~~~~~~~---------~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s 74 (319)
T 3frx_A 9 LRGTLE----GHNGWVTSLATSAGQPN---------LLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLT 74 (319)
T ss_dssp EEEEEC----CCSSCEEEEEECSSCTT---------EEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEEC
T ss_pred EEEEEc----cccceEEEEEccCCCcc---------EEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEEC
Confidence 345565 899999999999976 7 899999999999999864 234567787 99999999999
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCeEE
Q 036605 83 KKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPLQY 160 (340)
Q Consensus 83 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~ 160 (340)
|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.+ |++||++. ..+..+.+|...|.+
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQ 153 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEE
Confidence 999999999999999999999999999999999999999999999999987655 99999974 477888899999999
Q ss_pred EEECCC------CCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEE
Q 036605 161 VSASDG------AKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWD 234 (340)
Q Consensus 161 ~~~s~~------~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd 234 (340)
+.|.|. +..+++++. |+.|++||++ ..+....+. +|...+..+ .+ +|++.+|++++.||.|++||
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~-d~~i~~wd~~--~~~~~~~~~---~h~~~v~~~--~~-sp~g~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGN-DKMVKAWNLN--QFQIEADFI---GHNSNINTL--TA-SPDGTLIASAGKDGEIMLWN 224 (319)
T ss_dssp EEECCC------CCEEEEEET-TSCEEEEETT--TTEEEEEEC---CCCSCEEEE--EE-CTTSSEEEEEETTCEEEEEE
T ss_pred EEEccCCCCCCCccEEEEEeC-CCEEEEEECC--cchhheeec---CCCCcEEEE--EE-cCCCCEEEEEeCCCeEEEEE
Confidence 999985 447888777 9999999983 333222222 566666666 66 89999999999999999999
Q ss_pred CCCCCccC
Q 036605 235 LKTVSQDE 242 (340)
Q Consensus 235 ~~~~~~~~ 242 (340)
+.+.+.+.
T Consensus 225 ~~~~~~~~ 232 (319)
T 3frx_A 225 LAAKKAMY 232 (319)
T ss_dssp TTTTEEEE
T ss_pred CCCCcEEE
Confidence 98865544
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-32 Score=233.76 Aligned_cols=210 Identities=14% Similarity=0.148 Sum_probs=172.3
Q ss_pred ceeeeeeCCCCCCCC-CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEE--EecCCCCCCeEEEEEecC
Q 036605 8 SLLAEWKQPDGEPVV-SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKW--KSTGRHPGGLAGLAFAKK 84 (340)
Q Consensus 8 ~~~~~~~~~~~~~~~-~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~--~~~~~h~~~v~~v~~~~~ 84 (340)
+++..+. +|.. .|.+++|+|+++ +||+|+.|++|+|||+.++.... .+..+|...|.+++|+|+
T Consensus 6 ~~~~~~~----~h~~~~v~~l~~sp~g~---------~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 72 (345)
T 3fm0_A 6 VLLGRVP----AHPDSRCWFLAWNPAGT---------LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC 72 (345)
T ss_dssp EEEEEEC----CSTTSCEEEEEECTTSS---------CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT
T ss_pred EEeeeec----CCCCCcEEEEEECCCCC---------EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC
Confidence 4455666 5555 999999999999 89999999999999999886432 233349999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCe--EEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCc---eeEEeecCCCC
Q 036605 85 GRSLHVVGTNGMASEMKSEMGE--VIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGE---EVLKFSDDVGP 157 (340)
Q Consensus 85 ~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~---~~~~~~~~~~~ 157 (340)
+++|++++.|+.|++||+.++. .+..+.+|...|.+++|+|++++|++++.+ |++||+.++. .+..+..|...
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence 9999999999999999988764 466788999999999999999999987655 9999998764 34567889999
Q ss_pred eEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 158 LQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
|.+++|+|++.+|++++. |+.|++||++ .+..... ....+|...+..+ .| +|++.+|++++.||.|++|+...
T Consensus 153 v~~~~~~p~~~~l~s~s~-d~~i~~w~~~--~~~~~~~-~~~~~h~~~v~~l--~~-sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASY-DDTVKLYREE--EDDWVCC-ATLEGHESTVWSL--AF-DPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp EEEEEECSSSSCEEEEET-TSCEEEEEEE--TTEEEEE-EEECCCSSCEEEE--EE-CTTSSEEEEEETTSCEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEeC-CCcEEEEEec--CCCEEEE-EEecCCCCceEEE--EE-CCCCCEEEEEeCCCeEEEecccc
Confidence 999999999999999888 9999999984 3221111 1112566666666 66 89999999999999999999754
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-31 Score=249.27 Aligned_cols=222 Identities=14% Similarity=0.182 Sum_probs=181.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecC--------
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTG-------- 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~-------- 70 (340)
|||+.+++....+. +|...|++++|+|+|+ +||+|+.||+|+|||+.+++ ....+..
T Consensus 43 l~~~~~~~~~~~~~----~h~~~v~~~~~spdg~---------~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v 109 (611)
T 1nr0_A 43 TVPVGSLTDTEIYT----EHSHQTTVAKTSPSGY---------YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI 109 (611)
T ss_dssp EEETTCSSCCEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEE
T ss_pred EecCCCcccCeEec----CCCCceEEEEECCCCc---------EEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEE
Confidence 58888888888887 8999999999999999 99999999999999986432 1111111
Q ss_pred -----------------------------------CCCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCeEEEEeecC
Q 036605 71 -----------------------------------RHPGGLAGLAFAKKGR-SLHVVGTNGMASEMKSEMGEVIREFKAS 114 (340)
Q Consensus 71 -----------------------------------~h~~~v~~v~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~ 114 (340)
+|.+.|++++|+|++. .|++++.|+.|++||..+++.+..+.+|
T Consensus 110 ~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H 189 (611)
T 1nr0_A 110 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 189 (611)
T ss_dssp EECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC
T ss_pred EECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc
Confidence 2677788888888776 5899999999999999999998999999
Q ss_pred CCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEee-------cCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEc
Q 036605 115 EKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFS-------DDVGPLQYVSASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 115 ~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
...|.+++|+|++++|++++.+ |++||+.+++.+..+. +|...|.+++|+|++++|++++. |++|++||+
T Consensus 190 ~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~-D~~v~lWd~ 268 (611)
T 1nr0_A 190 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA-DKTIKIWNV 268 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET-TSEEEEEET
T ss_pred cCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC-CCeEEEEeC
Confidence 9999999999999999986555 9999999998887774 79999999999999999999888 999999998
Q ss_pred cCCCCCccCCc----------------------------------------eeeecCCCeeeeeecCCCCCCCCEEEEEe
Q 036605 186 DISSKTVNKGP----------------------------------------ALSMRHSPVAIDCKNSPNGEDGTVILAVA 225 (340)
Q Consensus 186 ~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~s 225 (340)
+ +++....+ ....+|...+..+ .+ +|++.+|++++
T Consensus 269 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l--~~-spdg~~l~s~s 343 (611)
T 1nr0_A 269 A--TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL--SS-SADGKTLFSAD 343 (611)
T ss_dssp T--TTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE--EE-CTTSSEEEEEE
T ss_pred C--CCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE--EE-eCCCCEEEEEe
Confidence 4 33221110 0112455555555 56 89999999999
Q ss_pred CCCcEEEEECCCCCcc
Q 036605 226 ESGVAYSWDLKTVSQD 241 (340)
Q Consensus 226 ~dg~i~vwd~~~~~~~ 241 (340)
.||.|++||+.++...
T Consensus 344 ~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 344 AEGHINSWDISTGISN 359 (611)
T ss_dssp TTSCEEEEETTTCCEE
T ss_pred CCCcEEEEECCCCcee
Confidence 9999999999886543
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.3e-32 Score=235.91 Aligned_cols=220 Identities=15% Similarity=0.146 Sum_probs=168.9
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAF 81 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~ 81 (340)
|+..+..+...+. +|...|++++|+|+++ +|++|+.||+|++||+.+++....+.. |...|.+++|
T Consensus 51 ~~~~~~~~~~~l~----gH~~~V~~~~~sp~~~---------~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~ 116 (380)
T 3iz6_a 51 FNPTDLVCCRTLQ----GHSGKVYSLDWTPEKN---------WIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAF 116 (380)
T ss_dssp CCCCCCEEEEEEC----CCSSCEEEEEECTTSS---------CEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEE
T ss_pred cccceeEEeeccc----ccccEEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEE
Confidence 6666667777787 8999999999999998 899999999999999999887777766 7667777777
Q ss_pred ecCCCE--------------------------------------------------EEEEeCCCcEEEEeCCCCeEEEEe
Q 036605 82 AKKGRS--------------------------------------------------LHVVGTNGMASEMKSEMGEVIREF 111 (340)
Q Consensus 82 ~~~~~~--------------------------------------------------l~s~~~dg~i~~wd~~~~~~~~~~ 111 (340)
+|++++ |++|+.|+.|++||+.+++.+..+
T Consensus 117 s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 117 APNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF 196 (380)
T ss_dssp CTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred CCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence 666544 555556666666666666666555
Q ss_pred -----ecCCCCeeEEEEcc-CCCEEEEecCc--EEEEECC-CCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEE
Q 036605 112 -----KASEKPISSSAFLC-EEKIFALASSE--VRILSLE-NGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQV 182 (340)
Q Consensus 112 -----~~~~~~i~~l~~~~-~~~~l~~~~~~--i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~i 182 (340)
.+|...+.++++++ ++.++++++.+ |++||++ .++.+..+.+|...|.+++|+|++.+|++++. |++|++
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-D~~i~l 275 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD-DGTCRL 275 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECS-SSCEEE
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcC-CCeEEE
Confidence 46778899999987 78888886554 9999998 45677889999999999999999999999887 999999
Q ss_pred EEccCCCCCccCCceeee----cCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCcc
Q 036605 183 WRCDISSKTVNKGPALSM----RHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 183 wd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
||++ ++.....+.... .+.+.+..+ .| ++++.+|++|+.||.|++||+..++..
T Consensus 276 wd~~--~~~~~~~~~~~~~~~~~~~~~v~~~--~~-s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 276 FDMR--TGHQLQVYNREPDRNDNELPIVTSV--AF-SISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EETT--TTEEEEEECCCCSSSCCSSCSCSEE--EE-CSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EECC--CCcEEEEecccccccccccCceEEE--EE-CCCCCEEEEEECCCCEEEEECCCCceE
Confidence 9994 433222111000 111123333 45 899999999999999999998776543
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-31 Score=235.43 Aligned_cols=216 Identities=15% Similarity=0.203 Sum_probs=181.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++....+. +|...|++++|+|+++ +|++|+.|++|++||+.+++....+. +...+.+++
T Consensus 149 iwd~~~~~~~~~~~----~h~~~v~~~~~~p~~~---------~l~s~s~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~ 213 (393)
T 1erj_A 149 IWDIENRKIVMILQ----GHEQDIYSLDYFPSGD---------KLVSGSGDRTVRIWDLRTGQCSLTLS--IEDGVTTVA 213 (393)
T ss_dssp EEETTTTEEEEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEE
T ss_pred EEECCCCcEEEEEc----cCCCCEEEEEEcCCCC---------EEEEecCCCcEEEEECCCCeeEEEEE--cCCCcEEEE
Confidence 69999999888887 8999999999999999 89999999999999999998877776 567899999
Q ss_pred Eec-CCCEEEEEeCCCcEEEEeCCCCeEEEEe-------ecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCC-----
Q 036605 81 FAK-KGRSLHVVGTNGMASEMKSEMGEVIREF-------KASEKPISSSAFLCEEKIFALASSE--VRILSLENG----- 145 (340)
Q Consensus 81 ~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~-------~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~----- 145 (340)
|+| ++++|++++.|+.|++||+.++..+..+ .+|...|.+++|+|++.+|++++.+ |++||+.+.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 999 8999999999999999999999887766 5688899999999999999986544 999999763
Q ss_pred -------ceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCC---CC
Q 036605 146 -------EEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSP---NG 215 (340)
Q Consensus 146 -------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 215 (340)
.....+.+|...|.+++|+|++.+|++++. |+.|++||+ .+++....+. +|...+..+.... .+
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~-D~~v~iwd~--~~~~~~~~l~---~h~~~v~~v~~~~~~~~~ 367 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK-DRGVLFWDK--KSGNPLLMLQ---GHRNSVISVAVANGSSLG 367 (393)
T ss_dssp -------CEEEEEECCSSCEEEEEECGGGCEEEEEET-TSEEEEEET--TTCCEEEEEE---CCSSCEEEEEECSSCTTC
T ss_pred ccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC-CCeEEEEEC--CCCeEEEEEC---CCCCCEEEEEecCCcCcC
Confidence 334567889999999999999999999888 999999998 4444433333 6766666652221 15
Q ss_pred CCCCEEEEEeCCCcEEEEECCC
Q 036605 216 EDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 216 ~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
|++.+|++|+.||.|++|++..
T Consensus 368 p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 368 PEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCEEEEECCCCcEEECcccc
Confidence 6889999999999999999764
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-31 Score=231.30 Aligned_cols=197 Identities=17% Similarity=0.197 Sum_probs=173.3
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEec--CCCEEEEEeCCCc
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAK--KGRSLHVVGTNGM 96 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~dg~ 96 (340)
.|...|.+++|+|++. .|++|+.||+|++||+++++.+..+.+ |...|.+++|+| +++.|++|+.||.
T Consensus 152 ~h~~~v~~~~~~~~~~---------~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 152 MHTNYLSACSFTNSDM---------QILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp ECSSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred ccCCcEEEEEEeCCCC---------EEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 6889999999999998 899999999999999999999999998 999999999987 4689999999999
Q ss_pred EEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecC--CCCeEEEEECCCCCEEEE
Q 036605 97 ASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDD--VGPLQYVSASDGAKIIIT 172 (340)
Q Consensus 97 i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s 172 (340)
|++||+++++.+..+..|...|.+++|+|++.++++++.+ |++||++.++.+..+..+ ...+.+++|+|++.+|++
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 9999999999999999999999999999999999986654 999999998777666533 357899999999999999
Q ss_pred EEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEE
Q 036605 173 AGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWD 234 (340)
Q Consensus 173 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd 234 (340)
++. |+.|++||+ ..+.....+. +|...+..+ .| +|++.+|++|+.||.|++|+
T Consensus 302 g~~-d~~i~vwd~--~~~~~~~~l~---~h~~~v~~l--~~-spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 302 GYN-DYTINVWDV--LKGSRVSILF---GHENRVSTL--RV-SPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EET-TSCEEEEET--TTCSEEEEEC---CCSSCEEEE--EE-CTTSSCEEEEETTSEEEEEC
T ss_pred EEC-CCcEEEEEC--CCCceEEEEE---CCCCcEEEE--EE-CCCCCEEEEEcCCCCEEecC
Confidence 887 999999998 3444333332 677777766 66 89999999999999999995
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-31 Score=226.29 Aligned_cols=219 Identities=13% Similarity=0.140 Sum_probs=173.3
Q ss_pred CccCCCC--ceeeeeeCCCCCCCCCeEEEEeecc--ccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCC
Q 036605 1 IWSTNDG--SLLAEWKQPDGEPVVSYSCLACGFV--GKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPG 74 (340)
Q Consensus 1 vwd~~~g--~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~ 74 (340)
|||+..+ +++..+. +|...|++++|+|+ ++ +|++|+.||+|++||+.+++ ....+.. |..
T Consensus 35 iw~~~~~~~~~~~~l~----gH~~~V~~v~~s~~~~g~---------~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~ 100 (297)
T 2pm7_B 35 IFEVEGETHKLIDTLT----GHEGPVWRVDWAHPKFGT---------ILASCSYDGKVMIWKEENGRWSQIAVHAV-HSA 100 (297)
T ss_dssp EEEBCSSCBCCCEEEC----CCSSCEEEEEECCGGGCS---------EEEEEETTTEEEEEEBSSSCBCCCEEECC-CSS
T ss_pred EEecCCCCcEEEEEEc----cccCCeEEEEecCCCcCC---------EEEEEcCCCEEEEEEcCCCceEEEEEeec-CCC
Confidence 5887643 5666776 89999999999864 67 89999999999999999874 4556666 999
Q ss_pred CeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCe--EEEEeecCCCCeeEEEEccC-------------CCEEEEecCc-
Q 036605 75 GLAGLAFAKK--GRSLHVVGTNGMASEMKSEMGE--VIREFKASEKPISSSAFLCE-------------EKIFALASSE- 136 (340)
Q Consensus 75 ~v~~v~~~~~--~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~-------------~~~l~~~~~~- 136 (340)
.|.+++|+|+ +..|++++.|+.|++||++++. ....+..|...|.+++|+|+ +++|++++.+
T Consensus 101 ~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 101 SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS
T ss_pred ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 9999999997 8899999999999999998763 23557789999999999997 4688886544
Q ss_pred -EEEEECCCCc----eeEEeecCCCCeEEEEECCCC---CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 137 -VRILSLENGE----EVLKFSDDVGPLQYVSASDGA---KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 137 -i~i~d~~~~~----~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
|++||+++++ ....+.+|...|.+++|+|++ .+|++++. |++|+|||++...............+...+..
T Consensus 181 ~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~-D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~ 259 (297)
T 2pm7_B 181 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ-DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR 259 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESSTTSCCEEEESSSSCCSSCEEE
T ss_pred cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC-CCcEEEEEeCCCCCccceeeeecccCCCcEEE
Confidence 9999998765 456788999999999999985 78888777 99999999842211110000000134455555
Q ss_pred eecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 209 CKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+ .| +|++.+|++++.||.|++|+...
T Consensus 260 ~--~~-s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 260 A--SW-SLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp E--EE-CSSSCCEEEEETTSCEEEEEECT
T ss_pred E--EE-CCCCCEEEEEcCCCcEEEEEECC
Confidence 5 66 89999999999999999999763
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-31 Score=227.75 Aligned_cols=221 Identities=15% Similarity=0.137 Sum_probs=169.8
Q ss_pred CccCCCCc--eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccC-------CeeEEEecCC
Q 036605 1 IWSTNDGS--LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLT-------GEMKWKSTGR 71 (340)
Q Consensus 1 vwd~~~g~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~-------~~~~~~~~~~ 71 (340)
|||+.++. +...+.. ..|...|.+++|+|+++ +|++|+.|++|++||+.. .+....+.+
T Consensus 38 lw~~~~~~~~~~~~~~~--~~h~~~v~~v~~sp~~~---------~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~- 105 (330)
T 2hes_X 38 LVSVKYDDFTLIDVLDE--TAHKKAIRSVAWRPHTS---------LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG- 105 (330)
T ss_dssp EEECSSSCCEEEEEECT--TCCCSCEEEEEECTTSS---------EEEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred EEEecCCCeEEEEEEec--CCccCCEEEEEECCCCC---------EEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-
Confidence 58887653 3444421 24899999999999999 999999999999999853 345667777
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCC----CeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCC
Q 036605 72 HPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEM----GEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENG 145 (340)
Q Consensus 72 h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~----~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~ 145 (340)
|.+.|.+++|+|++++|++|+.|+.|++||+.. .+.+..+..|...|.+++|+|++.+|++++.+ |++||+.++
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 999999999999999999999999999999943 24567788999999999999999999987654 999998776
Q ss_pred --ceeEEeecCCCCeEEEEECCC--CCEEEEEEcCCCeEEEEEccCCCCCcc----CCceeeecCCCeeeeeecCCCCCC
Q 036605 146 --EEVLKFSDDVGPLQYVSASDG--AKIIITAGYGEKHLQVWRCDISSKTVN----KGPALSMRHSPVAIDCKNSPNGED 217 (340)
Q Consensus 146 --~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 217 (340)
+.+..+.+|...|.+++|+|+ +.+|++++. |++|++||++....... ....+...|...+..+ .| +++
T Consensus 186 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v--~~-s~~ 261 (330)
T 2hes_X 186 DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD-DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNV--AW-GFN 261 (330)
T ss_dssp EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEET-TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEE--EE-CTT
T ss_pred CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC-CCeEEEEEecCCCccccceeEEeeecccccccceEEE--EE-cCC
Confidence 567888999999999999998 668888887 99999999842211000 0011111255566666 55 444
Q ss_pred CCEEEEEeCCCcEEEEECCCC
Q 036605 218 GTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 218 ~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.+|++++.||.|++|+..++
T Consensus 262 -~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 262 -GLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp -SCEEEEETTSCEEEEEEETT
T ss_pred -CEEEEEeCCCEEEEEEcCCC
Confidence 47999999999999998654
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.7e-30 Score=221.16 Aligned_cols=216 Identities=15% Similarity=0.071 Sum_probs=171.2
Q ss_pred CccCCCC-------ceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCC
Q 036605 1 IWSTNDG-------SLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHP 73 (340)
Q Consensus 1 vwd~~~g-------~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~ 73 (340)
|||+.++ .....+. +|...|++++|+|++. +|++|+.|++|++||+.+++....+.+ |.
T Consensus 53 iWd~~~~~~~~~~~~~~~~l~----~h~~~V~~~~~~~~~~---------~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~ 118 (343)
T 2xzm_R 53 IWKLYEEEQNGYFGIPHKALT----GHNHFVSDLALSQENC---------FAISSSWDKTLRLWDLRTGTTYKRFVG-HQ 118 (343)
T ss_dssp EEEECSSCCSSBSEEEEEEEC----CCSSCEEEEEECSSTT---------EEEEEETTSEEEEEETTSSCEEEEEEC-CC
T ss_pred EEECCcCCcccccccccchhc----cCCCceEEEEECCCCC---------EEEEEcCCCcEEEEECCCCcEEEEEcC-CC
Confidence 5777543 3344555 8999999999999999 999999999999999999999989988 99
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEee---cCCCCeeEEEEccCC----------CEEEEecC--cEE
Q 036605 74 GGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFK---ASEKPISSSAFLCEE----------KIFALASS--EVR 138 (340)
Q Consensus 74 ~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~---~~~~~i~~l~~~~~~----------~~l~~~~~--~i~ 138 (340)
+.|.+++|+|++++|++++.|+.|++||+.... ..... .|...+.+++|+|++ .++++++. .|+
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 999999999999999999999999999998443 33332 677889999999987 67877654 499
Q ss_pred EEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC
Q 036605 139 ILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG 218 (340)
Q Consensus 139 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (340)
+||. .......+.+|...|.+++|+|++++|++++. |+.|++||++ .... ....+ .+...+..+ .| +|++
T Consensus 198 iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~-dg~v~iwd~~--~~~~-~~~~~--~~~~~v~~v--~~-sp~~ 267 (343)
T 2xzm_R 198 VWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGK-DKKLLIWDIL--NLTY-PQREF--DAGSTINQI--AF-NPKL 267 (343)
T ss_dssp EEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEET-TCEEEEEESS--CCSS-CSEEE--ECSSCEEEE--EE-CSSS
T ss_pred EEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcC-CCeEEEEECC--CCcc-cceee--cCCCcEEEE--EE-CCCC
Confidence 9994 45567788999999999999999999999888 9999999983 2111 11111 222334444 55 7888
Q ss_pred CEEEEEeCCCcEEEEECCCCCccC
Q 036605 219 TVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 219 ~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+++++ .|+.|++|++.+.....
T Consensus 268 ~~la~~-~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 268 QWVAVG-TDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp CEEEEE-ESSCEEEEESSSCCSCS
T ss_pred CEEEEE-CCCCEEEEEeCCCCCCc
Confidence 877655 57779999998765443
No 27
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.2e-32 Score=234.66 Aligned_cols=204 Identities=9% Similarity=0.041 Sum_probs=159.2
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEE----EecCCCCCCeEEEEEecCCCEEEEEeCC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKW----KSTGRHPGGLAGLAFAKKGRSLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~----~~~~~h~~~v~~v~~~~~~~~l~s~~~d 94 (340)
+|...|++++|+|+++ +++++.||+|++||+.+++... ...+ |.+.|++++|+|++++|++++.|
T Consensus 92 ~~~~~V~~~~~s~d~~----------~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs~d 160 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKG----------ILVASDSGAVELWEILEKESLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGGKD 160 (357)
T ss_dssp ECSSCEEEEEEETTTE----------EEEEETTSCEEEC--------CCCCEEECC-CSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCCCEEEEEEcCCCC----------EEEEECCCEEEEeeccccceeEEEeeccCC-CCCCEEEEEECCCCCEEEEEeCC
Confidence 5788899999999988 5567789999999998876432 2334 99999999999999999999999
Q ss_pred CcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEec--CcEEEEECCCCceeEEe--ecCCCCeEEEEECCCCC-
Q 036605 95 GMASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALAS--SEVRILSLENGEEVLKF--SDDVGPLQYVSASDGAK- 168 (340)
Q Consensus 95 g~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~--~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~- 168 (340)
+.|++||+.+++.+..+..|...|.+++|+|++. ++++++ +.|++||+++++.+..+ ..|...+.+++|+|++.
T Consensus 161 g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 9999999999999999999999999999999875 555644 45999999998877554 45667899999999854
Q ss_pred EEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC-CEEEEEeCCCcEEEEECCCCCccC
Q 036605 169 IIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG-TVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 169 ~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+|++++. |+.|++||++ .++....+. .|...+..+ .| +|++ .+|++|+.||.|+|||+.+++.+.
T Consensus 241 ~la~g~~-d~~i~~wd~~--~~~~~~~~~---~~~~~v~~l--~~-sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 241 TFACGDE-TGNVSLVNIK--NPDSAQTSA---VHSQNITGL--AY-SYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp EEEEEES-SSCEEEEESS--CGGGCEEEC---CCSSCEEEE--EE-CSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred eEEEeec-ccceeEEECC--CCcEeEEEe---ccceeEEEE--EE-cCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 5666555 9999999983 444333333 565666665 56 6665 678999999999999998876554
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-31 Score=232.26 Aligned_cols=230 Identities=13% Similarity=0.146 Sum_probs=179.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccc---------------------------------ccc--------c
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKK---------------------------------RRK--------E 39 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~---------------------------------~~~--------~ 39 (340)
|||+.+++....+. .|...|.+++|+|+++. ++. .
T Consensus 92 iWd~~~~~~~~~~~----~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~ 167 (380)
T 3iz6_a 92 VWNALTSQKTHAIK----LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVP 167 (380)
T ss_dssp EEETTTTEEEEEEE----CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCS
T ss_pred EEECCCCccceEEe----cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEec
Confidence 68888888887777 67777777777776530 000 0
Q ss_pred cCceEEEEEcCCCcEEEEEccCCeeEEEec----CCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEeCC-CCeEEEEeec
Q 036605 40 RGTLLLALGTSNGDILAVDVLTGEMKWKST----GRHPGGLAGLAFAK-KGRSLHVVGTNGMASEMKSE-MGEVIREFKA 113 (340)
Q Consensus 40 ~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~----~~h~~~v~~v~~~~-~~~~l~s~~~dg~i~~wd~~-~~~~~~~~~~ 113 (340)
.+...|++|+.|++|++||+.+++.+..+. .+|...|.+++|++ +++.|++|+.|+.|++||++ .+..+..+.+
T Consensus 168 ~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~ 247 (380)
T 3iz6_a 168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG 247 (380)
T ss_dssp SSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC
T ss_pred CCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC
Confidence 012368899999999999999988776662 23899999999987 78899999999999999998 4567788899
Q ss_pred CCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCC-------CCeEEEEECCCCCEEEEEEcCCCeEEEEE
Q 036605 114 SEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDV-------GPLQYVSASDGAKIIITAGYGEKHLQVWR 184 (340)
Q Consensus 114 ~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~s~~~~d~~i~iwd 184 (340)
|...|.+++|+|++.+|++++.+ |++||+++++.+..+..+. ..|.+++|+|+|.+|++++. |+.|++||
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-dg~i~vwd 326 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-NGDCYVWD 326 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-TSCEEEEE
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-CCCEEEEE
Confidence 99999999999999999997655 9999999998887775443 24899999999999999777 99999999
Q ss_pred ccCCCCCccCCc-eeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 185 CDISSKTVNKGP-ALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 185 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
+. .++....+ .+...|...+..+ .| +|++.+|++|+.||.|++|++...+.
T Consensus 327 ~~--~~~~~~~~~~~~~~h~~~v~~l--~~-s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 327 TL--LAEMVLNLGTLQNSHEGRISCL--GL-SSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp TT--TCCEEEEECCSCSSCCCCCCEE--EE-CSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred CC--CCceEEEEecccCCCCCceEEE--EE-CCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 83 33322211 1112455555555 55 89999999999999999999986543
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.8e-30 Score=218.56 Aligned_cols=204 Identities=16% Similarity=0.200 Sum_probs=167.5
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC--eeEEEecCCCCCCeEEEEEecC--CCEEEEEeCC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG--EMKWKSTGRHPGGLAGLAFAKK--GRSLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d 94 (340)
+|...|++++|+|+++ +||+|+.|++|++||+..+ +.+..+.+ |.+.|++++|+++ +++|++|+.|
T Consensus 7 ~h~~~V~~~~~s~~g~---------~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGK---------RMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp SCSSCEEEEEECTTSS---------EEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCcCceEEEEECCCCC---------EEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEcCC
Confidence 7999999999999999 9999999999999999753 56778888 9999999999863 8899999999
Q ss_pred CcEEEEeCCCCe--EEEEeecCCCCeeEEEEccC--CCEEEEecCc--EEEEECCCCce--eEEeecCCCCeEEEEECCC
Q 036605 95 GMASEMKSEMGE--VIREFKASEKPISSSAFLCE--EKIFALASSE--VRILSLENGEE--VLKFSDDVGPLQYVSASDG 166 (340)
Q Consensus 95 g~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~~--i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~ 166 (340)
+.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.+ |++||++++.. ...+.+|...|.+++|+|+
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999998874 45567788999999999998 8888886544 99999987632 3567889999999999997
Q ss_pred -------------CCEEEEEEcCCCeEEEEEccCCCCCccC-CceeeecCCCeeeeeecCCCCCC---CCEEEEEeCCCc
Q 036605 167 -------------AKIIITAGYGEKHLQVWRCDISSKTVNK-GPALSMRHSPVAIDCKNSPNGED---GTVILAVAESGV 229 (340)
Q Consensus 167 -------------~~~l~s~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~s~dg~ 229 (340)
+++|++++. |+.|++||++ .+.... ......+|...+..+ .| +|+ +.+|++++.||.
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~-D~~v~lwd~~--~~~~~~~~~~~l~~H~~~V~~v--~~-sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDV--AW-SPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp C------------CCEEEEEET-TSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEE--EE-CCCCSSSEEEEEEETTSC
T ss_pred cccccccCCCCCCcceEEEEcC-CCcEEEEEEc--CCCceEEEEEEecCCCCceEEE--EE-CCCCCCceEEEEEECCCc
Confidence 468888887 9999999995 222111 111112577777777 66 676 489999999999
Q ss_pred EEEEECCCC
Q 036605 230 AYSWDLKTV 238 (340)
Q Consensus 230 i~vwd~~~~ 238 (340)
|++||+...
T Consensus 231 v~iWd~~~~ 239 (297)
T 2pm7_B 231 CIIWTQDNE 239 (297)
T ss_dssp EEEEEESST
T ss_pred EEEEEeCCC
Confidence 999998764
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.8e-30 Score=223.11 Aligned_cols=203 Identities=13% Similarity=0.128 Sum_probs=169.7
Q ss_pred eeeeeCCCCCCCCCeEEEEe-----ec-cccccccccCceEEEEEcCCCcEEEEEccCC-------eeEEEecCCCCCCe
Q 036605 10 LAEWKQPDGEPVVSYSCLAC-----GF-VGKKRRKERGTLLLALGTSNGDILAVDVLTG-------EMKWKSTGRHPGGL 76 (340)
Q Consensus 10 ~~~~~~~~~~~~~~v~~l~~-----sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~-------~~~~~~~~~h~~~v 76 (340)
...+. +|...|++++| ++ +++ +|++|+.|++|++||+.++ .....+.+ |...|
T Consensus 14 ~~~l~----gH~~~V~~~~~~~s~~~~~d~~---------~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V 79 (343)
T 2xzm_R 14 RGILE----GHSDWVTSIVAGFSQKENEDSP---------VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFV 79 (343)
T ss_dssp EEEEE----CCSSCEEEEEECCCSSTTCCCC---------EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCE
T ss_pred eeeec----cchhhhhheeeEEEeecCCCCC---------EEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCce
Confidence 34565 89999999999 66 778 9999999999999998753 34566777 99999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEe---
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKF--- 151 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~--- 151 (340)
.+++|+|++.+|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.+ |++||+... ....+
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~ 158 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEK 158 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecc
Confidence 999999999999999999999999999999999999999999999999999999886554 999999844 33333
Q ss_pred ecCCCCeEEEEECCCC----------CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEE
Q 036605 152 SDDVGPLQYVSASDGA----------KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVI 221 (340)
Q Consensus 152 ~~~~~~v~~~~~s~~~----------~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (340)
..|...|.+++|+|++ .+|++++. |+.|++||. .......+. .|...+..+ .| +|++.+|
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~~i~iwd~---~~~~~~~~~---~h~~~v~~~--~~-s~~g~~l 228 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW-DGRLKVWNT---NFQIRYTFK---AHESNVNHL--SI-SPNGKYI 228 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET-TSEEEEEET---TTEEEEEEE---CCSSCEEEE--EE-CTTSSEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcC-CCEEEEEcC---CCceeEEEc---CccccceEE--EE-CCCCCEE
Confidence 3688899999999987 68898887 999999995 222222222 566666665 66 8999999
Q ss_pred EEEeCCCcEEEEECCC
Q 036605 222 LAVAESGVAYSWDLKT 237 (340)
Q Consensus 222 ~~~s~dg~i~vwd~~~ 237 (340)
++|+.||.|++||+..
T Consensus 229 ~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 229 ATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEETTCEEEEEESSC
T ss_pred EEEcCCCeEEEEECCC
Confidence 9999999999999954
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.7e-30 Score=239.95 Aligned_cols=216 Identities=14% Similarity=0.185 Sum_probs=177.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC------CCCC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG------RHPG 74 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~------~h~~ 74 (340)
|||..++++...+. +|...|++++|+|+++ +|++|+.|++|++||+.+++....+.. +|.+
T Consensus 174 lwd~~~~~~~~~l~----~H~~~V~~v~fspdg~---------~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~ 240 (611)
T 1nr0_A 174 IFEGPPFKFKSTFG----EHTKFVHSVRYNPDGS---------LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG 240 (611)
T ss_dssp EEETTTBEEEEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred EEECCCCeEeeeec----cccCceEEEEECCCCC---------EEEEEECCCcEEEEECCCCcEeeeeccccccccccCC
Confidence 58888888888887 8999999999999999 999999999999999999988877742 3999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEE-------------------------------------------e
Q 036605 75 GLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIRE-------------------------------------------F 111 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-------------------------------------------~ 111 (340)
.|.+++|+|++++|++++.|+.|++||+.+++.+.. +
T Consensus 241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE
Confidence 999999999999999999999999999998765443 3
Q ss_pred ecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEe-e------------------------------------
Q 036605 112 KASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKF-S------------------------------------ 152 (340)
Q Consensus 112 ~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~-~------------------------------------ 152 (340)
.+|...|.+++|+|++++|++++.+ |++||+.+++....+ .
T Consensus 321 ~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~ 400 (611)
T 1nr0_A 321 YGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGV 400 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSS
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccc
Confidence 4678899999999999999986554 999998876433221 0
Q ss_pred ---------------------------------------------cCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccC
Q 036605 153 ---------------------------------------------DDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDI 187 (340)
Q Consensus 153 ---------------------------------------------~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~ 187 (340)
.|...+.+++|+|+|++|++++. |+.|++||+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~-D~~v~lwd~~- 478 (611)
T 1nr0_A 401 DSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ-DSKVHVYKLS- 478 (611)
T ss_dssp CTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEET-TSEEEEEEEE-
T ss_pred cccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCC-CCeEEEEEcc-
Confidence 12345678999999999999888 9999999984
Q ss_pred CCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 188 SSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.+.. .... ...|...+..+ .| +|++.+|++++.|+.|++|++.+
T Consensus 479 -~~~~-~~~~-~~~h~~~v~~v--~f-spdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 479 -GASV-SEVK-TIVHPAEITSV--AF-SNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp -TTEE-EEEE-EEECSSCEEEE--EE-CTTSSEEEEEETTSCEEEEEGGG
T ss_pred -CCce-eeee-ccCCCCceEEE--EE-CCCCCEEEEEcCCCCEEEEEcCC
Confidence 3221 1111 13677677766 67 89999999999999999999987
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-30 Score=222.37 Aligned_cols=211 Identities=12% Similarity=0.104 Sum_probs=166.9
Q ss_pred CCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC--eeEEEec-CCCCCCeEEEEEe
Q 036605 6 DGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG--EMKWKST-GRHPGGLAGLAFA 82 (340)
Q Consensus 6 ~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--~~~~~~~-~~h~~~v~~v~~~ 82 (340)
+.+++..+. +|...|.+++|+|+ +|++|+.||+|++||+..+ .....+. ..|.+.|.+++|+
T Consensus 3 ~~~~~~~~~----~h~~~v~~~~~s~~-----------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~s 67 (330)
T 2hes_X 3 SINLIKSLK----LYKEKIWSFDFSQG-----------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWR 67 (330)
T ss_dssp CCEEEEEEE----CCSSCEEEEEEETT-----------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEEC
T ss_pred ccccceeec----cCCCceeeeccCCC-----------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEEC
Confidence 455677777 89999999999975 5999999999999999875 3455553 3399999999999
Q ss_pred cCCCEEEEEeCCCcEEEEeCCC-------CeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCC----ceeE
Q 036605 83 KKGRSLHVVGTNGMASEMKSEM-------GEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENG----EEVL 149 (340)
Q Consensus 83 ~~~~~l~s~~~dg~i~~wd~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~----~~~~ 149 (340)
|++++|++++.|+.|++||+.. .+.+..+.+|...|.+++|+|++++|++++.+ |++||+... +.+.
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 9999999999999999999853 35567788999999999999999999987654 999999432 4567
Q ss_pred EeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCC--CCEEEEEeCC
Q 036605 150 KFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGED--GTVILAVAES 227 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~s~d 227 (340)
.+.+|...|.+++|+|++.+|++++. |+.|++||++....+....+. +|...+..+ .| +++ +.+|++++.|
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~l~s~s~-D~~i~iW~~~~~~~~~~~~~~---~h~~~v~~~--~~-~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEALLASSSY-DDTVRIWKDYDDDWECVAVLN---GHEGTVWSS--DF-DKTEGVFRLCSGSDD 220 (330)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEET-TSCEEEEEEETTEEEEEEEEC---CCSSCEEEE--EE-CCSSSSCEEEEEETT
T ss_pred EeccCCCceEEEEECCCCCEEEEEcC-CCeEEEEECCCCCeeEEEEcc---CCCCcEEEE--Ee-cCCCCeeEEEEEeCC
Confidence 78899999999999999999999888 999999998421112222222 566666666 55 566 6789999999
Q ss_pred CcEEEEECCCC
Q 036605 228 GVAYSWDLKTV 238 (340)
Q Consensus 228 g~i~vwd~~~~ 238 (340)
+.|++||+...
T Consensus 221 ~~v~iw~~~~~ 231 (330)
T 2hes_X 221 STVRVWKYMGD 231 (330)
T ss_dssp SCEEEEEEEEE
T ss_pred CeEEEEEecCC
Confidence 99999998764
No 33
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-30 Score=231.21 Aligned_cols=217 Identities=12% Similarity=0.076 Sum_probs=178.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++....+. .|...|++++|+|+++ +|++|+.||.|++||+.+++....+.+ |.+.|.+++
T Consensus 123 iwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~---------~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~ 188 (420)
T 3vl1_A 123 VLDSNFNLQREIDQ----AHVSEITKLKFFPSGE---------ALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIA 188 (420)
T ss_dssp EECTTSCEEEEETT----SSSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEE
T ss_pred EEeCCCcceeeecc----cccCccEEEEECCCCC---------EEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEE
Confidence 69999888887766 7999999999999999 999999999999999999998888888 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecC---C---------------------CCeeEEEEccCCCEEEEecCc
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKAS---E---------------------KPISSSAFLCEEKIFALASSE 136 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~---~---------------------~~i~~l~~~~~~~~l~~~~~~ 136 (340)
|+|+++.|++++.|+.|++||+.+++.+..+..+ . ..+.+++|+|+++++++++.+
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999988887643 2 344455567899999886554
Q ss_pred --EEEEECCCCceeEEe-ecCCCCeEEEEECCCCC-EEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecC
Q 036605 137 --VRILSLENGEEVLKF-SDDVGPLQYVSASDGAK-IIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNS 212 (340)
Q Consensus 137 --i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~-~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (340)
|++||+++++.+..+ ..|...|.+++|+|++. +|++++. |+.|++||++ .+.. ....+...+...+..+ .
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~-dg~i~vwd~~--~~~~-~~~~~~~~~~~~v~~~--~ 342 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-NGMLAQWDLR--SPEC-PVGEFLINEGTPINNV--Y 342 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET-TSEEEEEETT--CTTS-CSEEEEESTTSCEEEE--E
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC-CCeEEEEEcC--CCcC-chhhhhccCCCCceEE--E
Confidence 999999999887776 45788999999999999 8888777 9999999994 3322 1122222244434333 2
Q ss_pred CCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 213 PNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 213 ~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
.+++.+|++++.||.|++|++....
T Consensus 343 --~~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 343 --FAAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp --EETTEEEEEETTTEEEEEEEECCTT
T ss_pred --eCCCCEEEEecCCccEEEEeccCCC
Confidence 3577899999999999999998743
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9e-31 Score=233.45 Aligned_cols=207 Identities=13% Similarity=0.125 Sum_probs=165.8
Q ss_pred CCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeE--EEecCCCCCCeEEEEEec-CCCEEEEEeCC
Q 036605 19 EPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMK--WKSTGRHPGGLAGLAFAK-KGRSLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~--~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d 94 (340)
.|...|+||+|+|.+ . +||+|+.||.|+|||+.+++.. ..+.+ |.+.|++|+|+| ++++|++|+.|
T Consensus 117 ~~~~~V~~l~~~P~~~~---------~lasGs~dg~i~lWd~~~~~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPS---------TVAVGSKGGDIMLWNFGIKDKPTFIKGIG-AGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp ECSSCEEEEEECSSCTT---------CEEEEETTSCEEEECSSCCSCCEEECCCS-SSCCCCEEEECSSCTTEEEEECSS
T ss_pred CCCCCEEEEEEeCCCCC---------EEEEEeCCCEEEEEECCCCCceeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCC
Confidence 577899999999954 7 8999999999999999877643 34455 999999999998 68899999999
Q ss_pred CcEEEEeCCCCeEEEEeec--CCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCeEEEEECCCCCE-
Q 036605 95 GMASEMKSEMGEVIREFKA--SEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPLQYVSASDGAKI- 169 (340)
Q Consensus 95 g~i~~wd~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~- 169 (340)
|.|++||++++........ +...+.+++|+|++.+|++++.+ |++||++. +.+..+.+|...|.+++|+|++..
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceE
Confidence 9999999987654433332 23457899999999999997655 99999875 467788999999999999999875
Q ss_pred EEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 170 IITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 170 l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
|++++. |+.|+|||++ .......+.....|...+..+ .| +|++.+|++++.||.|+|||+.+++...
T Consensus 266 ~~s~s~-d~~v~iwd~~--~~~~~~~~~~~~~h~~~v~~~--~~-spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 266 LATASV-DQTVKIWDLR--QVRGKASFLYSLPHRHPVNAA--CF-SPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp EEEEET-TSBCCEEETT--TCCSSSCCSBCCBCSSCEEEC--CB-CTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred EEEecC-cceeeEEecc--cccccceEEEeeeccccccce--eE-CCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 555555 9999999995 333333333333666667666 77 8999999999999999999998865443
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-30 Score=241.16 Aligned_cols=206 Identities=17% Similarity=0.310 Sum_probs=180.5
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||. +++++..+. .|...|++++|+|+++ +|++|+.|+.|++||. +++.+..+.+ |...|++++
T Consensus 370 ~~~~-~~~~~~~~~----~~~~~v~~~~~s~dg~---------~l~~~~~d~~v~~~~~-~~~~~~~~~~-~~~~v~~~~ 433 (577)
T 2ymu_A 370 LWNR-NGQLLQTLT----GHSSSVRGVAFSPDGQ---------TIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVA 433 (577)
T ss_dssp EEET-TCCEEEEEE----CCSSCEEEEEECTTSS---------CEEEEETTSEEEEECT-TCCEEEEEEC-CSSCEEEEE
T ss_pred EEcC-CCCEEEEec----CCCCCeEEEEECCCCC---------EEEEEeCCCEEEEEeC-CCCEEEEecC-CCCCeEEEE
Confidence 4774 567777777 7899999999999999 8999999999999995 5677778888 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v 158 (340)
|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.+ |++||. +++.+..+.+|...|
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v 511 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 511 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE
T ss_pred ECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE
Confidence 9999999999999999999996 567788899999999999999999999986554 999995 677889999999999
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEE
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWD 234 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd 234 (340)
++++|+|++++|++++. |+.|++||. .++....+. +|...+..+ .| +||+.+|++++.||.|++||
T Consensus 512 ~~l~~s~dg~~l~s~~~-dg~v~lwd~---~~~~~~~~~---~h~~~v~~~--~f-s~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 512 RGVAFSPDGQTIASASD-DKTVKLWNR---NGQLLQTLT---GHSSSVWGV--AF-SPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECTTSSCEEEEET-TSEEEEECT---TSCEEEEEE---CCSSCEEEE--EE-CTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCCCCEEEEEEC-cCEEEEEeC---CCCEEEEEc---CCCCCEEEE--EE-cCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999888 999999996 344433333 777777776 67 89999999999999999997
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=9.8e-30 Score=222.87 Aligned_cols=220 Identities=15% Similarity=0.150 Sum_probs=180.4
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC-CCCCCeEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG-RHPGGLAGL 79 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~v 79 (340)
|+.....+...+. +|...|+|++|+|++ + +|++|+.||.|++||+.+++....+.. .|.+.|.++
T Consensus 58 ~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~ 124 (383)
T 3ei3_B 58 RSLKSYKLHRTAS----PFDRRVTSLEWHPTHPT---------TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGM 124 (383)
T ss_dssp HHHTTCEEEEEEC----CCSSCEEEEEECSSCTT---------EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEE
T ss_pred ccccccceEEecc----CCCCCEEEEEECCCCCC---------EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEE
Confidence 3445556666666 899999999999999 8 999999999999999998887766652 399999999
Q ss_pred EEec-CCCEEEEEeCCCcEEEEeCCCCeEEEEeecC---CCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec
Q 036605 80 AFAK-KGRSLHVVGTNGMASEMKSEMGEVIREFKAS---EKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD 153 (340)
Q Consensus 80 ~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~---~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~ 153 (340)
+|+| +++.|++++.|+.|++||+.+ ..+..+..+ ...+.+++|+|++.++++++.+ |++||+ +++.+..+..
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~ 202 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL 202 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc
Confidence 9999 778999999999999999986 445555444 3779999999999999987655 999999 5678889999
Q ss_pred CCCCeEEEEECCCCC-EEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCC-CCCEEEEEeCCCcEE
Q 036605 154 DVGPLQYVSASDGAK-IIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGE-DGTVILAVAESGVAY 231 (340)
Q Consensus 154 ~~~~v~~~~~s~~~~-~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~s~dg~i~ 231 (340)
|...|.+++|+|++. +|++++. |+.|++||++ .............|...+..+ .| +| ++.+|++++.||.|+
T Consensus 203 h~~~v~~~~~~~~~~~~l~s~~~-d~~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~--~~-s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCDWLMATSSV-DATVKLWDLR--NIKDKNSYIAEMPHEKPVNAA--YF-NPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp SSSCEEEEEECSSCTTEEEEEET-TSEEEEEEGG--GCCSTTCEEEEEECSSCEEEE--EE-CTTTSCEEEEEESSSEEE
T ss_pred CCCcEEEEEECCCCCCEEEEEeC-CCEEEEEeCC--CCCcccceEEEecCCCceEEE--EE-cCCCCCEEEEEcCCCcEE
Confidence 999999999999999 7888777 9999999995 322222233333566666666 66 78 999999999999999
Q ss_pred EEECCCCCccC
Q 036605 232 SWDLKTVSQDE 242 (340)
Q Consensus 232 vwd~~~~~~~~ 242 (340)
+||+.+++...
T Consensus 277 iwd~~~~~~~~ 287 (383)
T 3ei3_B 277 VYSSYDWSKPD 287 (383)
T ss_dssp EEETTBTTSCS
T ss_pred EEECCCCcccc
Confidence 99998876554
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.7e-29 Score=220.44 Aligned_cols=213 Identities=17% Similarity=0.204 Sum_probs=174.3
Q ss_pred CceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc--CCeeEEEecCCCCCCeEEEEEecC
Q 036605 7 GSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL--TGEMKWKSTGRHPGGLAGLAFAKK 84 (340)
Q Consensus 7 g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~--~~~~~~~~~~~h~~~v~~v~~~~~ 84 (340)
|+++..+. +|...|++++|+|+++ +|++|+.||.|++||+. +++....+.+ |.+.|++++|+++
T Consensus 1 G~~~~~~~----~h~~~v~~~~~s~~~~---------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~ 66 (379)
T 3jrp_A 1 GSMVVIAN----AHNELIHDAVLDYYGK---------RLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHP 66 (379)
T ss_dssp ----CCEE----ECCCCEEEEEECSSSS---------EEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCG
T ss_pred CCccEEec----CCcccEEEEEEcCCCC---------EEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCC
Confidence 34555666 8999999999999999 99999999999999998 5566777887 9999999999977
Q ss_pred --CCEEEEEeCCCcEEEEeCCCCe--EEEEeecCCCCeeEEEEccC--CCEEEEecCc--EEEEECCCCc--eeEEeecC
Q 036605 85 --GRSLHVVGTNGMASEMKSEMGE--VIREFKASEKPISSSAFLCE--EKIFALASSE--VRILSLENGE--EVLKFSDD 154 (340)
Q Consensus 85 --~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~~--i~i~d~~~~~--~~~~~~~~ 154 (340)
+++|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ +.++++++.+ |++||+.++. ....+..|
T Consensus 67 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 146 (379)
T 3jrp_A 67 KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH 146 (379)
T ss_dssp GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC
T ss_pred CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC
Confidence 8999999999999999999987 66777889999999999999 8999886554 9999998874 34566789
Q ss_pred CCCeEEEEECC-------------CCCEEEEEEcCCCeEEEEEccCCCCCccCCce-eeecCCCeeeeeecCCCCCC---
Q 036605 155 VGPLQYVSASD-------------GAKIIITAGYGEKHLQVWRCDISSKTVNKGPA-LSMRHSPVAIDCKNSPNGED--- 217 (340)
Q Consensus 155 ~~~v~~~~~s~-------------~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--- 217 (340)
...|.+++|+| ++.+|++++. |+.|++||++ .+....... ....|...+..+ .| +|+
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~~~~~~~~~~h~~~v~~~--~~-sp~~~~ 220 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYN--SDAQTYVLESTLEGHSDWVRDV--AW-SPTVLL 220 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEET-TSCEEEEEEE--TTTTEEEEEEEECCCSSCEEEE--EE-CCCCSS
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEec--CCCcceeeEEEEecccCcEeEE--EE-CCCCCC
Confidence 99999999999 6899999888 9999999995 222111111 112455556665 66 788
Q ss_pred CCEEEEEeCCCcEEEEECCCCC
Q 036605 218 GTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 218 ~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
+.+|++++.||.|++||+..+.
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTT
T ss_pred CCeEEEEeCCCEEEEEeCCCCC
Confidence 8999999999999999998753
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=3.6e-30 Score=221.65 Aligned_cols=210 Identities=12% Similarity=0.139 Sum_probs=170.7
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC----eeEEEecCCCCCCeEEEEEec--CCCEEEEEe
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG----EMKWKSTGRHPGGLAGLAFAK--KGRSLHVVG 92 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~ 92 (340)
+|...|+|++|+|+++ +|++|+.||.|++||+.++ +....+.+ |.+.|++++|+| ++++|++++
T Consensus 9 gH~~~v~~~~~~~~~~---------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGR---------HVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCSSCEEEEEECSSSS---------EEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccccceeEEEEcCCCC---------EEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEc
Confidence 7999999999999999 9999999999999999876 45666777 999999999999 699999999
Q ss_pred CCCcEEEEeCCCC---------eEEEEeecCCCCeeEEEEccC--CCEEEEecCc--EEEEECCCCce------------
Q 036605 93 TNGMASEMKSEMG---------EVIREFKASEKPISSSAFLCE--EKIFALASSE--VRILSLENGEE------------ 147 (340)
Q Consensus 93 ~dg~i~~wd~~~~---------~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~~--i~i~d~~~~~~------------ 147 (340)
.||.|++||+.++ +.+..+..|...|.+++|+|+ +.++++++.+ |++||+++++.
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 9999999999887 567778889999999999999 9999886544 99999875531
Q ss_pred ------------------------------------------------eEEeecCCCCeEEEEECCCC----CEEEEEEc
Q 036605 148 ------------------------------------------------VLKFSDDVGPLQYVSASDGA----KIIITAGY 175 (340)
Q Consensus 148 ------------------------------------------------~~~~~~~~~~v~~~~~s~~~----~~l~s~~~ 175 (340)
+..+.+|...|.+++|+|++ .+|++++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 33456788999999999998 78888777
Q ss_pred CCCeEEEEEccCCCCCcc-----------------------------------------CCceeeecCCCeeeeeecCCC
Q 036605 176 GEKHLQVWRCDISSKTVN-----------------------------------------KGPALSMRHSPVAIDCKNSPN 214 (340)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~ 214 (340)
|+.|++||++....... ........|...+..+ .|
T Consensus 239 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~- 314 (351)
T 3f3f_A 239 -DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV--SW- 314 (351)
T ss_dssp -TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE--EE-
T ss_pred -CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE--EE-
Confidence 99999999953210000 0011112355556655 66
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 215 GEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 215 ~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
++++.+|++++.||.|++|++.++++..
T Consensus 315 s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 315 NLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp CSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred cCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 8899999999999999999998876554
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=8.4e-31 Score=223.77 Aligned_cols=218 Identities=16% Similarity=0.209 Sum_probs=173.1
Q ss_pred CccCCCCc--eeeeeeCCCCCCCCCeEEEEeecc--ccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCC
Q 036605 1 IWSTNDGS--LLAEWKQPDGEPVVSYSCLACGFV--GKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPG 74 (340)
Q Consensus 1 vwd~~~g~--~~~~~~~~~~~~~~~v~~l~~sp~--~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~ 74 (340)
|||+.++. ++..+. +|...|++++|+|+ ++ +|++|+.|++|++||+.+++ ....+.+ |.+
T Consensus 39 lwd~~~~~~~~~~~l~----gH~~~V~~v~~~~~~~~~---------~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~ 104 (316)
T 3bg1_A 39 IFDVRNGGQILIADLR----GHEGPVWQVAWAHPMYGN---------ILASCSYDRKVIIWREENGTWEKSHEHAG-HDS 104 (316)
T ss_dssp EEEEETTEEEEEEEEE----CCSSCEEEEEECCGGGSS---------CEEEEETTSCEEEECCSSSCCCEEEEECC-CSS
T ss_pred EEEecCCCcEEEEEEc----CCCccEEEEEeCCCCCCC---------EEEEEECCCEEEEEECCCCcceEEEEccC-CCC
Confidence 68988775 346676 89999999999864 67 89999999999999998874 5556777 999
Q ss_pred CeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCeE---EEEeecCCCCeeEEEEccC-----------------CCEEEE
Q 036605 75 GLAGLAFAKK--GRSLHVVGTNGMASEMKSEMGEV---IREFKASEKPISSSAFLCE-----------------EKIFAL 132 (340)
Q Consensus 75 ~v~~v~~~~~--~~~l~s~~~dg~i~~wd~~~~~~---~~~~~~~~~~i~~l~~~~~-----------------~~~l~~ 132 (340)
.|++++|+|+ +.+|++++.|+.|++||+..+.. ...+..|...+.+++|+|+ +.+|++
T Consensus 105 ~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 184 (316)
T 3bg1_A 105 SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFAS 184 (316)
T ss_dssp CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEEC
T ss_pred ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEE
Confidence 9999999998 78999999999999999987632 3345678889999999997 367877
Q ss_pred ecCc--EEEEECCCC---ceeEEeecCCCCeEEEEECCCC----CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCC
Q 036605 133 ASSE--VRILSLENG---EEVLKFSDDVGPLQYVSASDGA----KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHS 203 (340)
Q Consensus 133 ~~~~--i~i~d~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 203 (340)
++.+ |++||+..+ +.+..+.+|...|.+++|+|++ .+|++++. |++|++|+++........ ......|.
T Consensus 185 gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~-D~~v~iw~~~~~~~~~~~-~~~~~~~~ 262 (316)
T 3bg1_A 185 GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ-DGRVFIWTCDDASSNTWS-PKLLHKFN 262 (316)
T ss_dssp CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET-TCEEEEEECSSTTCCCCB-CCEEEECS
T ss_pred ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC-CCeEEEEEccCccccchh-hhhhhcCC
Confidence 6544 999999755 3567788999999999999986 78898887 999999998421111111 11112455
Q ss_pred CeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 204 PVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 204 ~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
..+..+ .| +|++.+|++++.||.|++|+...
T Consensus 263 ~~v~~v--~~-sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 263 DVVWHV--SW-SITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp SCEEEE--EE-CTTTCCEEEEESSSCEEEEEECT
T ss_pred CcEEEE--EE-cCCCCEEEEEcCCCeEEEEEECC
Confidence 566666 66 89999999999999999999753
No 40
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=3.4e-30 Score=220.00 Aligned_cols=203 Identities=17% Similarity=0.202 Sum_probs=164.3
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCCCeEEEEEec--CCCEEEEEeCC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPGGLAGLAFAK--KGRSLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d 94 (340)
+|...|++++|+|+++ +||+|+.|++|++||+.++. .+..+.+ |.+.|.+++|++ +++.|++|+.|
T Consensus 11 ~H~~~V~~v~~s~~g~---------~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGT---------RLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp ---CCEEEEEECGGGC---------EEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETT
T ss_pred cccCeEEEeeEcCCCC---------EEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECC
Confidence 7999999999999999 99999999999999999875 4567777 999999999986 48899999999
Q ss_pred CcEEEEeCCCCe--EEEEeecCCCCeeEEEEccC--CCEEEEecCc--EEEEECCCCce---eEEeecCCCCeEEEEECC
Q 036605 95 GMASEMKSEMGE--VIREFKASEKPISSSAFLCE--EKIFALASSE--VRILSLENGEE---VLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 95 g~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~~--i~i~d~~~~~~---~~~~~~~~~~v~~~~~s~ 165 (340)
+.|++||++++. ....+.+|...|.+++|+|+ +.+|++++.+ |++||+..+.. ...+.+|...+.++.|+|
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 160 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc
Confidence 999999999873 56677889999999999998 7888886554 99999987632 344578889999999999
Q ss_pred C-----------------CCEEEEEEcCCCeEEEEEccCCCC-CccCCceeeecCCCeeeeeecCCCCCCC----CEEEE
Q 036605 166 G-----------------AKIIITAGYGEKHLQVWRCDISSK-TVNKGPALSMRHSPVAIDCKNSPNGEDG----TVILA 223 (340)
Q Consensus 166 ~-----------------~~~l~s~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~ 223 (340)
+ +.+|++++. |+.|++||++.... .....+. .|...+..+ .| +|++ .+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~sgs~-D~~v~lWd~~~~~~~~~~~~l~---~h~~~V~~v--~~-sp~~~~~~~~las 233 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKRFASGGC-DNLIKLWKEEEDGQWKEEQKLE---AHSDWVRDV--AW-APSIGLPTSTIAS 233 (316)
T ss_dssp CCCC------CCSCCCCCCCBEECCBT-TSBCCEEEECTTSCEEEEECCB---CCSSCEEEE--EC-CCCSSCSCCEEEE
T ss_pred ccCCccccccccccCccccceEEEecC-CCeEEEEEeCCCCccceeeecc---cCCCceEEE--Ee-cCCCCCCCceEEE
Confidence 7 367888777 99999999841110 1222233 677777777 66 6765 88999
Q ss_pred EeCCCcEEEEECCCC
Q 036605 224 VAESGVAYSWDLKTV 238 (340)
Q Consensus 224 ~s~dg~i~vwd~~~~ 238 (340)
++.||.|++|++...
T Consensus 234 ~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 234 CSQDGRVFIWTCDDA 248 (316)
T ss_dssp EETTCEEEEEECSST
T ss_pred EcCCCeEEEEEccCc
Confidence 999999999998763
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.3e-30 Score=226.32 Aligned_cols=214 Identities=14% Similarity=0.170 Sum_probs=178.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEe---cCCCCCCe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKS---TGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~---~~~h~~~v 76 (340)
|||+.+++.+..+. .|...|++++|+| ++. +|++|+.||.|++||+.+++....+ .. |...|
T Consensus 99 v~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v 164 (366)
T 3k26_A 99 IINPITMQCIKHYV----GHGNAINELKFHPRDPN---------LLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEV 164 (366)
T ss_dssp EECTTTCCEEEEEE----SCCSCEEEEEECSSCTT---------EEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCE
T ss_pred EEEchhceEeeeec----CCCCcEEEEEECCCCCC---------EEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCce
Confidence 69999999998888 7899999999999 788 9999999999999999999988887 45 99999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEee----------------------------cCCCCeeEEEEccCCC
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFK----------------------------ASEKPISSSAFLCEEK 128 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~----------------------------~~~~~i~~l~~~~~~~ 128 (340)
.+++|+|+++.|++++.||.|++||+.+++....+. .|...|.+++|+ +.
T Consensus 165 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~ 242 (366)
T 3k26_A 165 LSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD 242 (366)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT
T ss_pred eEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC
Confidence 999999999999999999999999999876443333 388899999999 66
Q ss_pred EEEEecCc--EEEEECCCCce--------------eEEeecCCCCeEEEEECCC--CCEEEEEEcCCCeEEEEEccCCCC
Q 036605 129 IFALASSE--VRILSLENGEE--------------VLKFSDDVGPLQYVSASDG--AKIIITAGYGEKHLQVWRCDISSK 190 (340)
Q Consensus 129 ~l~~~~~~--i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~l~s~~~~d~~i~iwd~~~~~~ 190 (340)
++++++.+ |++||+.++.. +..+..|...|.+++|+|+ +.+|++++. |+.|++||++ .+
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~-dg~i~vwd~~--~~ 319 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ-VGKLYVWDLE--VE 319 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT-TSCEEEEECC--SS
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec-CCcEEEEECC--CC
Confidence 88776544 99999987644 6778889999999999999 999999777 9999999994 44
Q ss_pred CccCCceeee-cC--CCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 191 TVNKGPALSM-RH--SPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 191 ~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
+........+ .| ...+..+ .| ++++.+|++++.||.|++||+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~--~~-s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQT--SF-SRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEE--EE-CTTSSEEEEEETTSEEEEEEC-
T ss_pred CCccccceEEcccccCCceEEE--Ee-CCCCCeEEEEeCCCEEEEEEec
Confidence 3332222222 23 4555555 66 8999999999999999999985
No 42
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=6.4e-30 Score=225.59 Aligned_cols=205 Identities=12% Similarity=0.141 Sum_probs=171.2
Q ss_pred CCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCC-------eeEEEecCCCCCCeEEEEEecCC-CEEE
Q 036605 19 EPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTG-------EMKWKSTGRHPGGLAGLAFAKKG-RSLH 89 (340)
Q Consensus 19 ~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~-------~~~~~~~~~h~~~v~~v~~~~~~-~~l~ 89 (340)
+|...|++++|+| ++. +|++|+.||.|++||+.++ +....+.+ |...|.+++|+|++ ..|+
T Consensus 79 ~h~~~V~~~~~~p~~~~---------~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~ 148 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDN---------VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLL 148 (402)
T ss_dssp CCSSCEEEEEECTTCTT---------EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEE
T ss_pred cCCCCEEEEEeCCCCCC---------EEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEE
Confidence 7999999999999 788 9999999999999999987 55677777 99999999999998 6999
Q ss_pred EEeCCCcEEEEeCCCCeEEEEe--ecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEe-ecCCCC-eEEEEE
Q 036605 90 VVGTNGMASEMKSEMGEVIREF--KASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKF-SDDVGP-LQYVSA 163 (340)
Q Consensus 90 s~~~dg~i~~wd~~~~~~~~~~--~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~-~~~~~~-v~~~~~ 163 (340)
+++.|+.|++||+.+++.+..+ ..|...|.+++|+|++.+|++++.+ |++||+++++.+..+ ..|... +..+.|
T Consensus 149 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 149 SAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp EEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 9999999999999999999888 7899999999999999999886544 999999999988888 788766 899999
Q ss_pred CCCCCEEEEEE--cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEE-EEeCCCcEEEEECCCCC
Q 036605 164 SDGAKIIITAG--YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVIL-AVAESGVAYSWDLKTVS 239 (340)
Q Consensus 164 s~~~~~l~s~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~s~dg~i~vwd~~~~~ 239 (340)
+|++.+|+++. ..|+.|++||++ .... ........+...+..+ .| ++++.+|+ +++.||.|++|++.+++
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~--~~~~-~~~~~~~~~~~~v~~~--~~-s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTK--HLEE-PLSLQELDTSSGVLLP--FF-DPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETT--BCSS-CSEEEECCCCSSCEEE--EE-ETTTTEEEEEETTCSCEEEEEECSST
T ss_pred cCCCcEEEEeccCCCCceEEEEcCc--cccC-CceEEeccCCCceeEE--EE-cCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 99998888862 339999999984 3222 1112223444444444 55 78888886 55579999999998765
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=9.4e-29 Score=212.22 Aligned_cols=218 Identities=10% Similarity=0.076 Sum_probs=182.1
Q ss_pred CccCCCCcee---eeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCCC
Q 036605 1 IWSTNDGSLL---AEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~g~~~---~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~~ 75 (340)
|||+.++... ..+... .|...|++++|+|+++ +|++|+.||.|++||+.+++ ....+.. |...
T Consensus 76 iw~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~---------~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~ 143 (337)
T 1gxr_A 76 VWDISHPGNKSPVSQLDCL--NRDNYIRSCKLLPDGC---------TLIVGGEASTLSIWDLAAPTPRIKAELTS-SAPA 143 (337)
T ss_dssp EEETTSTTCCSCSEEEECS--CTTSBEEEEEECTTSS---------EEEEEESSSEEEEEECCCC--EEEEEEEC-SSSC
T ss_pred EEECCCCCceeeeeccccc--CCCCcEEEEEEcCCCC---------EEEEEcCCCcEEEEECCCCCcceeeeccc-CCCc
Confidence 5888776533 222211 5889999999999999 99999999999999999887 5556666 9999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD 153 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~ 153 (340)
|.+++|+|+++.|++++.||.|++||+.+++.+..+..|...+.+++|+|++.++++++.+ |++||+++++.+..+.
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~- 222 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD- 222 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-
Confidence 9999999999999999999999999999999999999999999999999999999886544 9999999998777664
Q ss_pred CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEE
Q 036605 154 DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSW 233 (340)
Q Consensus 154 ~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vw 233 (340)
+...+.+++|+|++.++++++. ++.|++||++ .++.. ....|...+..+ .| ++++.+|++++.||.|++|
T Consensus 223 ~~~~v~~~~~s~~~~~l~~~~~-~~~i~~~~~~--~~~~~----~~~~~~~~v~~~--~~-~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 223 FTSQIFSLGYCPTGEWLAVGME-SSNVEVLHVN--KPDKY----QLHLHESCVLSL--KF-AYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEET-TSCEEEEETT--SSCEE----EECCCSSCEEEE--EE-CTTSSEEEEEETTSEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcC-CCcEEEEECC--CCCeE----EEcCCccceeEE--EE-CCCCCEEEEecCCCcEEEE
Confidence 6788999999999999999887 9999999984 33221 112455555555 56 8899999999999999999
Q ss_pred ECCCCCcc
Q 036605 234 DLKTVSQD 241 (340)
Q Consensus 234 d~~~~~~~ 241 (340)
++.+++..
T Consensus 293 ~~~~~~~~ 300 (337)
T 1gxr_A 293 RTPYGASI 300 (337)
T ss_dssp ETTTCCEE
T ss_pred ECCCCeEE
Confidence 99886654
No 44
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=7.7e-30 Score=224.35 Aligned_cols=218 Identities=14% Similarity=0.096 Sum_probs=181.4
Q ss_pred CccCCCCc------eeeeeeCCCCCCCCCeEEEEeecc----c---cccccccCceEEEEEcCCCcEEEEEccCCee---
Q 036605 1 IWSTNDGS------LLAEWKQPDGEPVVSYSCLACGFV----G---KKRRKERGTLLLALGTSNGDILAVDVLTGEM--- 64 (340)
Q Consensus 1 vwd~~~g~------~~~~~~~~~~~~~~~v~~l~~sp~----~---~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~--- 64 (340)
|||+.+++ ....+. .|...|++++|+|+ + + +|++|+.||.|++||+.+++.
T Consensus 40 iw~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~g~~~~---------~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 40 VWDNKLLDNENPKDKSYSHF----VHKSGLHHVDVLQAIERDAFELC---------LVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp EEESBCCTTCCGGGGEEEEE----CCTTCEEEEEEEEEEETTTEEEE---------EEEEEETTSCEEEEEEEECTTTCC
T ss_pred EEECCCcccccCCCcceEEe----cCCCcEEEEEEecccccCCcccc---------EEEEEcCCCCEEEEEccCCccccc
Confidence 68998887 667777 78999999999999 8 8 999999999999999998886
Q ss_pred --EEEecCCC-----CCCeEEEEEe----cCCCE-EEEEeCCCcEEEEeCCC------CeEEE-----Eee-------cC
Q 036605 65 --KWKSTGRH-----PGGLAGLAFA----KKGRS-LHVVGTNGMASEMKSEM------GEVIR-----EFK-------AS 114 (340)
Q Consensus 65 --~~~~~~~h-----~~~v~~v~~~----~~~~~-l~s~~~dg~i~~wd~~~------~~~~~-----~~~-------~~ 114 (340)
...+.. | ...|.+++|+ |++.. |++++.||.|++||+.+ ++.+. .+. .|
T Consensus 107 ~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 107 VIFEKLDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp EEEEEECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred ccceeecc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence 777777 7 5899999999 99999 99999999999999988 65554 563 47
Q ss_pred CCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec---C---CCCeEEEEECCCCCEEEEEEcCC---CeEEEE
Q 036605 115 EKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD---D---VGPLQYVSASDGAKIIITAGYGE---KHLQVW 183 (340)
Q Consensus 115 ~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~---~---~~~v~~~~~s~~~~~l~s~~~~d---~~i~iw 183 (340)
...+.+++|+|++ ++++++.+ |++||+++++.+..+.. | ...|.+++|+|++.+|++++. | +.|++|
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~-d~~~g~i~i~ 263 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD-SNSFGCITLY 263 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE-ETTEEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEec-CCCCceEEEE
Confidence 8899999999999 88886554 99999999999999988 8 999999999999999999888 8 999999
Q ss_pred EccCCCCCccCCceeeec-------------CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 184 RCDISSKTVNKGPALSMR-------------HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 184 d~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
|++ .++....+. . |...+..+ .| ++++.+|++++.||.|++||+.+++.+.
T Consensus 264 d~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~--~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 264 ETE--FGERIGSLS---VPTHSSQASLGEFAHSSWVMSL--SF-NDSGETLCSAGWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp ETT--TCCEEEEEC---BC--------CCBSBSSCEEEE--EE-CSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ECC--CCcccceec---cCcccccccccccccCCcEEEE--EE-CCCCCEEEEEeCCCeEEEEEcCCCceeE
Confidence 984 443322222 2 55556555 66 7899999999999999999998866544
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=221.65 Aligned_cols=221 Identities=14% Similarity=0.141 Sum_probs=177.6
Q ss_pred CccCC--CCceeeeeeCCCCCCCCCeEEEEeecc--ccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCC
Q 036605 1 IWSTN--DGSLLAEWKQPDGEPVVSYSCLACGFV--GKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPG 74 (340)
Q Consensus 1 vwd~~--~g~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~ 74 (340)
|||+. +++....+. .|...|++++|+|+ ++ +|++|+.||.|++||+.+++ ....+.. |..
T Consensus 37 iw~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~---------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~ 102 (379)
T 3jrp_A 37 IFEVEGETHKLIDTLT----GHEGPVWRVDWAHPKFGT---------ILASCSYDGKVLIWKEENGRWSQIAVHAV-HSA 102 (379)
T ss_dssp EEEEETTEEEEEEEEC----CCSSCEEEEEECCGGGCS---------EEEEEETTSCEEEEEEETTEEEEEEEECC-CSS
T ss_pred EEecCCCcceeeeEec----CCCCcEEEEEeCCCCCCC---------EEEEeccCCEEEEEEcCCCceeEeeeecC-CCc
Confidence 58877 455556666 79999999999987 77 89999999999999999987 6666776 999
Q ss_pred CeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCe--EEEEeecCCCCeeEEEEcc-------------CCCEEEEecCc-
Q 036605 75 GLAGLAFAKK--GRSLHVVGTNGMASEMKSEMGE--VIREFKASEKPISSSAFLC-------------EEKIFALASSE- 136 (340)
Q Consensus 75 ~v~~v~~~~~--~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~-------------~~~~l~~~~~~- 136 (340)
.|.+++|+|+ +..|++++.|+.|++||+.++. ....+..|...|.+++|+| ++.++++++.+
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 9999999999 9999999999999999998873 3445678899999999999 68888886544
Q ss_pred -EEEEECCCCc----eeEEeecCCCCeEEEEECCC---CCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 137 -VRILSLENGE----EVLKFSDDVGPLQYVSASDG---AKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 137 -i~i~d~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
|++||++++. ....+.+|...|.+++|+|+ +.+|++++. |+.|++||++...............+...+..
T Consensus 183 ~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 261 (379)
T 3jrp_A 183 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR 261 (379)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESSTTSCCEEEESSSSCCSSCEEE
T ss_pred eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC-CCEEEEEeCCCCCccceeeeeccccCCCcEEE
Confidence 9999998764 33567889999999999999 889999887 99999999953211111111101124445555
Q ss_pred eecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 209 CKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
+ .| +|++.+|++++.||.|++|++....
T Consensus 262 ~--~~-s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 262 A--SW-SLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp E--EE-CSSSCCEEEEESSSSEEEEEEEETT
T ss_pred E--EE-cCCCCEEEEecCCCcEEEEeCCCCC
Confidence 5 56 8999999999999999999987643
No 46
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1e-28 Score=211.98 Aligned_cols=210 Identities=16% Similarity=0.238 Sum_probs=179.8
Q ss_pred CccCCCCc--eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEE
Q 036605 1 IWSTNDGS--LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 78 (340)
+||+.+++ ....+. .|...|++++|+|+++ +|++++.||.|++||+.+++....+.. |.+.|.+
T Consensus 123 ~~d~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~---------~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~ 188 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELT----SSAPACYALAISPDSK---------VCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASC 188 (337)
T ss_dssp EEECCCC--EEEEEEE----CSSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEE
T ss_pred EEECCCCCcceeeecc----cCCCceEEEEECCCCC---------EEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEE
Confidence 58888877 445555 7889999999999999 999999999999999999999988888 9999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEeecCCC
Q 036605 79 LAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKFSDDVG 156 (340)
Q Consensus 79 v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~~~~~~ 156 (340)
++|+|+++.|++++.||.|++||+.+++.+..+. +...+.+++|+|++.++++++ +.|++||+.+++. ..+..|..
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~ 266 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHES 266 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSS
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCcc
Confidence 9999999999999999999999999999887765 677899999999999998865 4499999998864 56778999
Q ss_pred CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 157 PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 157 ~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
.+.+++|+|++++|++++. |+.|++||+ ..++.. ....+...+..+ .+ ++++.+|++++.||.|++|++.
T Consensus 267 ~v~~~~~~~~~~~l~~~~~-dg~i~~~~~--~~~~~~----~~~~~~~~v~~~--~~-s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGK-DNLLNAWRT--PYGASI----FQSKESSSVLSC--DI-SVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CEEEEEECTTSSEEEEEET-TSEEEEEET--TTCCEE----EEEECSSCEEEE--EE-CTTSCEEEEEETTSCEEEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CCcEEEEEC--CCCeEE----EEecCCCcEEEE--EE-CCCCCEEEEecCCCeEEEEEEe
Confidence 9999999999999999888 999999998 344332 223455555555 55 8999999999999999999963
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4e-29 Score=220.43 Aligned_cols=215 Identities=13% Similarity=0.182 Sum_probs=182.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+|+....+. ..|...|++++|+|+++ +|++|+.||.|++||+.+++.+..+.+ |...|.+++
T Consensus 117 lw~~~~~~~~~~~~---~~~~~~v~~v~~s~~~~---------~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~ 183 (401)
T 4aez_A 117 VWNADSGSVSALAE---TDESTYVASVKWSHDGS---------FLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLS 183 (401)
T ss_dssp EEETTTCCEEEEEE---CCTTCCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEE
T ss_pred EeeCCCCcEeEeee---cCCCCCEEEEEECCCCC---------EEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEE
Confidence 69999999888777 34889999999999999 999999999999999999999999987 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCC-CCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecCCCC
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSE-MGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDDVGP 157 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~-~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~~~ 157 (340)
|+ +..|++++.||.|++||++ .+..+..+..|...|.+++|+|++.++++++. .|++||+.+++.+..+..|...
T Consensus 184 ~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 261 (401)
T 4aez_A 184 WN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA 261 (401)
T ss_dssp EE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC
T ss_pred EC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce
Confidence 95 6799999999999999998 56677788899999999999999999998764 4999999999999999999999
Q ss_pred eEEEEECCCCCEEEEEEc--CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEE--eCCCcEEEE
Q 036605 158 LQYVSASDGAKIIITAGY--GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAV--AESGVAYSW 233 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--s~dg~i~vw 233 (340)
|.+++|+|++..+++++. .|+.|++||++ +++.... +.+...+..+ .| ++++.+++++ +.||.|++|
T Consensus 262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~--~~~~~~~----~~~~~~v~~~--~~-s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAA--TGARVNT----VDAGSQVTSL--IW-SPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp CCEEEECTTSTTEEEEECCTTTCEEEEEETT--TCCEEEE----EECSSCEEEE--EE-CSSSSEEEEEECTTTCEEEEE
T ss_pred EEEEEECCCCCCEEEEecCCCCCEEEEEECC--CCCEEEE----EeCCCcEEEE--EE-CCCCCeEEEEeecCCCcEEEE
Confidence 999999998766666543 49999999983 4433222 2344445544 55 8899999994 489999999
Q ss_pred ECCCCC
Q 036605 234 DLKTVS 239 (340)
Q Consensus 234 d~~~~~ 239 (340)
++.++.
T Consensus 333 ~~~~~~ 338 (401)
T 4aez_A 333 SYSSSG 338 (401)
T ss_dssp EEETTE
T ss_pred ecCCcc
Confidence 987754
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=3.6e-30 Score=228.21 Aligned_cols=217 Identities=16% Similarity=0.146 Sum_probs=175.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+++....+. .+ ..+.+..|+|+++ +|++|+.||.|++||+.+++....+.. |.+.|++++
T Consensus 82 i~d~~~~~~~~~~~----~~-~~~~~~~~~~~~~---------~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~ 146 (420)
T 3vl1_A 82 LFNTIIRDGSKMLK----RA-DYTAVDTAKLQMR---------RFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLK 146 (420)
T ss_dssp EEECCSEETTTTSC----SC-CEEEEEEECSSSC---------EEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEE
T ss_pred EEEecccceeeEEe----cC-CceEEEEEecCCC---------EEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEE
Confidence 46766665544443 23 4455567899999 999999999999999999988877777 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec---CC
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD---DV 155 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~---~~ 155 (340)
|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++.+|++++.+ |++||+++++.+..+.. |.
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 226 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPH 226 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTT
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCC
Confidence 99999999999999999999999999999999999999999999999999886554 99999999988888764 33
Q ss_pred ---------------------CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCC
Q 036605 156 ---------------------GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPN 214 (340)
Q Consensus 156 ---------------------~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (340)
..+.+++|+|++++|++++. |+.|++||++ .++... .+...|...+..+ .|
T Consensus 227 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~~~~~--~~~~~~~~~v~~~--~~- 298 (420)
T 3vl1_A 227 DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV-SGVITVHNVF--SKEQTI--QLPSKFTCSCNSL--TV- 298 (420)
T ss_dssp CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET-TSCEEEEETT--TCCEEE--EECCTTSSCEEEE--EE-
T ss_pred CCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC-CCeEEEEECC--CCceeE--EcccccCCCceeE--EE-
Confidence 34444556889999999887 9999999994 333221 1222455555555 56
Q ss_pred CCCCC-EEEEEeCCCcEEEEECCCCCc
Q 036605 215 GEDGT-VILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 215 ~~~~~-~l~~~s~dg~i~vwd~~~~~~ 240 (340)
+|++. +|++++.||.|++||+.+++.
T Consensus 299 ~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 299 DGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 78888 999999999999999988643
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=7.9e-30 Score=221.47 Aligned_cols=225 Identities=12% Similarity=0.131 Sum_probs=177.6
Q ss_pred CccCCCCceeeeeeCC-CCCCCCCeEEEEeecc----ccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCC
Q 036605 1 IWSTNDGSLLAEWKQP-DGEPVVSYSCLACGFV----GKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~-~~~~~~~v~~l~~sp~----~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~ 75 (340)
|||..+++.+..+... ...|...|++++|+|+ ++ +|++|+.||.|++||+.+++.+..+.+ |...
T Consensus 48 vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~ 117 (366)
T 3k26_A 48 LYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP---------LLAVAGSRGIIRIINPITMQCIKHYVG-HGNA 117 (366)
T ss_dssp EEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE---------EEEEEETTCEEEEECTTTCCEEEEEES-CCSC
T ss_pred EEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC---------EEEEecCCCEEEEEEchhceEeeeecC-CCCc
Confidence 5888877766544411 0146788999999999 56 899999999999999999999989988 9999
Q ss_pred eEEEEEec-CCCEEEEEeCCCcEEEEeCCCCeEEEEe---ecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeE
Q 036605 76 LAGLAFAK-KGRSLHVVGTNGMASEMKSEMGEVIREF---KASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVL 149 (340)
Q Consensus 76 v~~v~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~---~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~ 149 (340)
|.+++|+| ++..|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++.++++++. .|++||+++++.+.
T Consensus 118 i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 197 (366)
T 3k26_A 118 INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 197 (366)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHH
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccc
Confidence 99999999 8999999999999999999999988887 678999999999999999988654 49999999876544
Q ss_pred Eee----------------------------cCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCcc--------
Q 036605 150 KFS----------------------------DDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVN-------- 193 (340)
Q Consensus 150 ~~~----------------------------~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~-------- 193 (340)
.+. .|...|.+++|+ +.++++++. |+.|++||++.......
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 198 AIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC-ENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp HHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS-SSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred ccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec-CCEEEEEeCCCccccccccccCCcc
Confidence 333 389999999998 668888777 99999999842211000
Q ss_pred -CCceeeecCCCeeeeeecCCCCCC--CCEEEEEeCCCcEEEEECCCCCcc
Q 036605 194 -KGPALSMRHSPVAIDCKNSPNGED--GTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 194 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
........|...+..+ .+ +++ +.+|++++.||.|++||+.+++..
T Consensus 275 ~~~~~~~~~~~~~v~~~--~~-s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 275 VTILGRFDYSQCDIWYM--RF-SMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEEEEEEECSSCCSSCC--CC-EECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred hheeccccccCCcEEEE--EE-cCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 0011111233333333 44 667 999999999999999999886543
No 50
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=5.5e-29 Score=229.57 Aligned_cols=207 Identities=17% Similarity=0.303 Sum_probs=178.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+||..... +..+. .|...|.+++|+|+++ +|++|+.||.|++||. +++.+..+.. |...|.+++
T Consensus 329 ~w~~~~~~-~~~~~----~~~~~v~~~~~s~~g~---------~l~~~~~dg~v~~~~~-~~~~~~~~~~-~~~~v~~~~ 392 (577)
T 2ymu_A 329 LWNRNGQH-LQTLT----GHSSSVWGVAFSPDGQ---------TIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVA 392 (577)
T ss_dssp EEETTSCE-EEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEET-TCCEEEEEEC-CSSCEEEEE
T ss_pred EEeCCCCe-eEEEe----CCCCCEEEEEECCCCC---------EEEEEeCCCEEEEEcC-CCCEEEEecC-CCCCeEEEE
Confidence 57765443 34454 6889999999999999 9999999999999995 5677888887 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v 158 (340)
|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.+ |++||. +++.+..+.+|...|
T Consensus 393 ~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v 470 (577)
T 2ymu_A 393 FSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 470 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCE
T ss_pred ECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCE
Confidence 9999999999999999999995 577888899999999999999999999886554 999996 566788899999999
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
.+++|+|++++|++++. |+.|++||. .++....+. .|...+..+ .| +|++.+|++++.||.|++||.
T Consensus 471 ~~~~~spd~~~las~~~-d~~i~iw~~---~~~~~~~~~---~h~~~v~~l--~~-s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 471 RGVAFSPDGQTIASASD-DKTVKLWNR---NGQLLQTLT---GHSSSVRGV--AF-SPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEEECTTSCEEEEEET-TSEEEEEET---TSCEEEEEE---CCSSCEEEE--EE-CTTSSCEEEEETTSEEEEECT
T ss_pred EEEEEcCCCCEEEEEeC-CCEEEEEcC---CCCEEEEEe---CCCCCEEEE--EE-cCCCCEEEEEECcCEEEEEeC
Confidence 99999999999999888 999999996 344333333 676667666 66 899999999999999999995
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=7.2e-29 Score=233.77 Aligned_cols=217 Identities=14% Similarity=0.133 Sum_probs=177.6
Q ss_pred CccCCCC-----ceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCC
Q 036605 1 IWSTNDG-----SLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~g-----~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~ 75 (340)
|||+.++ .....+. +|...|++++|+|+++ +|++|+.||+|++||+.+++....+.+ |.+.
T Consensus 409 ~W~~~~~~~~~~~~~~~~~----~h~~~v~~v~~s~~g~---------~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~ 474 (694)
T 3dm0_A 409 LWKLTKDDKAYGVAQRRLT----GHSHFVEDVVLSSDGQ---------FALSGSWDGELRLWDLAAGVSTRRFVG-HTKD 474 (694)
T ss_dssp EEECCCSTTCSCEEEEEEE----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTTEEEEEEEC-CSSC
T ss_pred EEEccCCCcccccccceec----CCCCcEEEEEECCCCC---------EEEEEeCCCcEEEEECCCCcceeEEeC-CCCC
Confidence 5877653 3345566 8999999999999999 999999999999999999999989988 9999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEe---ecCCCCeeEEEEccCC--CEEEEec--CcEEEEECCCCcee
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREF---KASEKPISSSAFLCEE--KIFALAS--SEVRILSLENGEEV 148 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~---~~~~~~i~~l~~~~~~--~~l~~~~--~~i~i~d~~~~~~~ 148 (340)
|.+++|+|+++.|++++.|+.|++||.......... .+|...|.+++|+|++ ..+++++ +.|++||+++++..
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 554 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE
Confidence 999999999999999999999999998765443332 3577889999999987 4677754 44999999999988
Q ss_pred EEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCC
Q 036605 149 LKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESG 228 (340)
Q Consensus 149 ~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg 228 (340)
..+.+|...|.+++|+|++++|++++. |+.|++||++ +++....+ .+...+..+ +| +|++.++++++ ++
T Consensus 555 ~~~~~h~~~v~~v~~spdg~~l~sg~~-Dg~i~iwd~~--~~~~~~~~----~~~~~v~~~--~~-sp~~~~l~~~~-~~ 623 (694)
T 3dm0_A 555 STLAGHTGYVSTVAVSPDGSLCASGGK-DGVVLLWDLA--EGKKLYSL----EANSVIHAL--CF-SPNRYWLCAAT-EH 623 (694)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET-TSBCEEEETT--TTEEEECC----BCSSCEEEE--EE-CSSSSEEEEEE-TT
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeC-CCeEEEEECC--CCceEEEe----cCCCcEEEE--EE-cCCCcEEEEEc-CC
Confidence 999999999999999999999999888 9999999993 44333222 233334444 55 78888877766 55
Q ss_pred cEEEEECCCCCccC
Q 036605 229 VAYSWDLKTVSQDE 242 (340)
Q Consensus 229 ~i~vwd~~~~~~~~ 242 (340)
.|++||+.+...+.
T Consensus 624 ~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 624 GIKIWDLESKSIVE 637 (694)
T ss_dssp EEEEEETTTTEEEE
T ss_pred CEEEEECCCCCChh
Confidence 59999999876554
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=9.6e-31 Score=228.68 Aligned_cols=208 Identities=7% Similarity=-0.034 Sum_probs=163.8
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC--eeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCc
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG--EMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGM 96 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~ 96 (340)
.+..+|+|++|+|+++ +|++|+.||.|++||+.++ +....+.+ |.+.|.+++|+|++++|++++.|+.
T Consensus 9 ~~~~~v~~~~~s~~g~---------~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRT---------EFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCSQDRN 78 (377)
T ss_dssp ECSSCCSCCEECSSSS---------EEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEETTSS
T ss_pred cCCCcEEEEEECCCCC---------EEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEeCCCe
Confidence 3567999999999999 9999999999999999988 66777777 9999999999999999999999999
Q ss_pred EEEEeCCCCe---EEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCce---eEEeec-CCCCeEEEEECCCC
Q 036605 97 ASEMKSEMGE---VIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEE---VLKFSD-DVGPLQYVSASDGA 167 (340)
Q Consensus 97 i~~wd~~~~~---~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~---~~~~~~-~~~~v~~~~~s~~~ 167 (340)
|++||+.++. ....+..|...|.+++|+|++++|++++.+ |++||+.+++. ...+.. |...|.+++|+|++
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN 158 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence 9999999877 566777899999999999999999886544 99999998863 677777 99999999999999
Q ss_pred CEEEEEEcCCCeEEEEEccCCCCCc------------cCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 168 KIIITAGYGEKHLQVWRCDISSKTV------------NKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 168 ~~l~s~~~~d~~i~iwd~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
.+|++++. |+.|++||++...... .......+.|...+..+ .| +|++.+|++++.||.|++||+
T Consensus 159 ~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~-sp~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 159 VLLAAGCA-DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAV--GF-SPSGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp SEEEEEES-SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEE--EE-CTTSSCEEEEETTTEEC-CEE
T ss_pred CEEEEEeC-CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEE--EE-CCCCCEEEEEeCCCcEEEEEC
Confidence 99999888 9999999984211000 01111112455555555 56 899999999999999999999
Q ss_pred CCCCc
Q 036605 236 KTVSQ 240 (340)
Q Consensus 236 ~~~~~ 240 (340)
.+++.
T Consensus 235 ~~~~~ 239 (377)
T 3dwl_C 235 SAPEQ 239 (377)
T ss_dssp CSTTS
T ss_pred CCCCC
Confidence 98765
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.2e-29 Score=219.75 Aligned_cols=219 Identities=16% Similarity=0.228 Sum_probs=179.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc-CCeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL-TGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~-~~~~~~~~~~~h~~~v~~v 79 (340)
|||+.+++.+..+. .|...|.+++| +++ +|++|+.||.|++||+. .+.....+.+ |.+.|.++
T Consensus 160 iwd~~~~~~~~~~~----~~~~~v~~~~~--~~~---------~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~ 223 (401)
T 4aez_A 160 IYDVESQTKLRTMA----GHQARVGCLSW--NRH---------VLSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGL 223 (401)
T ss_dssp EEETTTCCEEEEEC----CCSSCEEEEEE--ETT---------EEEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEE
T ss_pred EEECcCCeEEEEec----CCCCceEEEEE--CCC---------EEEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEE
Confidence 69999999888887 89999999999 456 89999999999999998 4556777777 99999999
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEe----cCcEEEEECCCCceeEEeecC
Q 036605 80 AFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALA----SSEVRILSLENGEEVLKFSDD 154 (340)
Q Consensus 80 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~----~~~i~i~d~~~~~~~~~~~~~ 154 (340)
+|+|+++.|++++.|+.|++||+.+++.+..+..|...|.+++|+|++. +++++ ++.|++||+.+++.+..+. +
T Consensus 224 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~ 302 (401)
T 4aez_A 224 AWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-A 302 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-C
T ss_pred EEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-C
Confidence 9999999999999999999999999999999999999999999999775 45554 3449999999998888775 5
Q ss_pred CCCeEEEEECCCCCEEEEEE-cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEE
Q 036605 155 VGPLQYVSASDGAKIIITAG-YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSW 233 (340)
Q Consensus 155 ~~~v~~~~~s~~~~~l~s~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vw 233 (340)
...+.+++|+|++.++++++ ..|+.|++||++ .+.......+ ..|...+..+ .| ++++.+|++++.||.|++|
T Consensus 303 ~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~--~~~~~~~~~~-~~h~~~v~~~--~~-s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 303 GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS--SSGLTKQVDI-PAHDTRVLYS--AL-SPDGRILSTAASDENLKFW 376 (401)
T ss_dssp SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE--TTEEEEEEEE-ECCSSCCCEE--EE-CTTSSEEEEECTTSEEEEE
T ss_pred CCcEEEEEECCCCCeEEEEeecCCCcEEEEecC--CccceeEEEe-cCCCCCEEEE--EE-CCCCCEEEEEeCCCcEEEE
Confidence 67899999999999999864 239999999994 3322222111 2455555555 55 8999999999999999999
Q ss_pred ECCCCCccC
Q 036605 234 DLKTVSQDE 242 (340)
Q Consensus 234 d~~~~~~~~ 242 (340)
++.+++.+.
T Consensus 377 ~~~~~~~~~ 385 (401)
T 4aez_A 377 RVYDGDHVK 385 (401)
T ss_dssp ECCC-----
T ss_pred ECCCCcccc
Confidence 999877665
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2e-30 Score=226.60 Aligned_cols=212 Identities=8% Similarity=-0.003 Sum_probs=166.0
Q ss_pred CccCCCC--ceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe---eEEEecCCCCCC
Q 036605 1 IWSTNDG--SLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE---MKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~g--~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~---~~~~~~~~h~~~ 75 (340)
|||+.++ +....+. +|...|++++|+|+++ +|++|+.||.|++||+.+++ ....+.. |...
T Consensus 37 iw~~~~~~~~~~~~~~----~h~~~v~~~~~s~~~~---------~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~ 102 (377)
T 3dwl_C 37 LYEQDGNGWKHARTFS----DHDKIVTCVDWAPKSN---------RIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRA 102 (377)
T ss_dssp EEEEETTEEEECCCBC----CCSSCEEEEEECTTTC---------CEEEEETTSSEEEC------CCCCEEECCC-CSSC
T ss_pred EEEccCCceEEEEEEe----cCCceEEEEEEeCCCC---------EEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCc
Confidence 5888887 5666666 7999999999999998 89999999999999999887 5666676 9999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeE---EEEeec-CCCCeeEEEEccCCCEEEEecCc--EEEEECC------
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEV---IREFKA-SEKPISSSAFLCEEKIFALASSE--VRILSLE------ 143 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~~~~~~-~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~------ 143 (340)
|.+++|+|+++.|++++.|+.|++||+.+++. ...+.. |...|.+++|+|++++|++++.+ |++||+.
T Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-
T ss_pred eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCC
Confidence 99999999999999999999999999998873 566777 89999999999999999886554 9999985
Q ss_pred ------------CCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc----cCCceeeecCCCeee
Q 036605 144 ------------NGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV----NKGPALSMRHSPVAI 207 (340)
Q Consensus 144 ------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~ 207 (340)
.++.+..+ .|...|.+++|+|++++|++++. |+.|++||++ .++. ...+. .|...+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~-d~~i~iwd~~--~~~~~~~~~~~~~---~~~~~v~ 255 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH-DSSVTIAYPS--APEQPPRALITVK---LSQLPLR 255 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET-TTEEC-CEEC--STTSCEEECCCEE---CSSSCEE
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC-CCcEEEEECC--CCCCcceeeEeec---CCCCceE
Confidence 34455666 89999999999999999999888 9999999994 4443 33333 5665566
Q ss_pred eeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 208 DCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 208 ~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.+ .| ++++.+|++++.++ +.+|+...
T Consensus 256 ~~--~~-s~~~~~l~~~~~~~-~~~~~~~~ 281 (377)
T 3dwl_C 256 SL--LW-ANESAIVAAGYNYS-PILLQGNE 281 (377)
T ss_dssp EE--EE-EETTEEEEEESSSS-EEEECCCC
T ss_pred EE--EE-cCCCCEEEEEcCCc-EEEEEeCC
Confidence 55 56 78999999888776 55776653
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.5e-29 Score=218.90 Aligned_cols=198 Identities=12% Similarity=0.145 Sum_probs=160.0
Q ss_pred CCCCeEEEEeeccccccccccCceEEEE--EcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcE
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLAL--GTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMA 97 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~--g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i 97 (340)
+...+.+++|||||+ +|++ |+.|++|+|||+.+++.+..+. |.+.|.+++|+|+|++|++++.+ .+
T Consensus 132 ~~~~~~~v~fSpDg~---------~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~~-~~ 199 (365)
T 4h5i_A 132 ADDYTKLVYISREGT---------VAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITGS-SL 199 (365)
T ss_dssp TTCCEEEEEECTTSS---------CEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECSS-CE
T ss_pred cccCEEEEEEcCCCC---------EEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccce-eE
Confidence 445689999999998 7664 4578999999999999888876 77889999999999999998865 56
Q ss_pred EEEeCCCCeEEEE--eecCCCCeeEEEEccCCCEEEEec--C----cEEEEECCCCce----eEEeecCCCCeEEEEECC
Q 036605 98 SEMKSEMGEVIRE--FKASEKPISSSAFLCEEKIFALAS--S----EVRILSLENGEE----VLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 98 ~~wd~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~~~~--~----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~s~ 165 (340)
.+|+..+++.+.. ...|...+.+++|+|++..+++++ + .+++|++..... ...+.+|...|++++|+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 200 EVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp EEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred EEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 6666667765543 445777899999999999998743 2 278888876643 345688999999999999
Q ss_pred CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 166 GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 166 ~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+|++|++++. |+.|+|||+ .+++....+ ..+|...+..+ .| +||+.+|++|+.|++|+||++..
T Consensus 280 dg~~lasgs~-D~~V~iwd~--~~~~~~~~~--~~gH~~~V~~v--~f-Spdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 280 KGELAVLASN-DNSIALVKL--KDLSMSKIF--KQAHSFAITEV--TI-SPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TSCEEEEEET-TSCEEEEET--TTTEEEEEE--TTSSSSCEEEE--EE-CTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCceEEEcC-CCEEEEEEC--CCCcEEEEe--cCcccCCEEEE--EE-CCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999888 999999998 454433221 12677778777 77 89999999999999999999964
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.8e-29 Score=234.97 Aligned_cols=207 Identities=15% Similarity=0.195 Sum_probs=174.1
Q ss_pred CCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCC-----eeEEEecCCCCCCeEEEEEecCCCEEEEEe
Q 036605 19 EPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTG-----EMKWKSTGRHPGGLAGLAFAKKGRSLHVVG 92 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 92 (340)
+|...|+|++|+|++ . +|++|+.||+|++||+.+. .....+.+ |...|.+++|+|++++|++|+
T Consensus 380 ~H~~~V~~v~~~~~~~~---------~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNAD---------IIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CCSSCEEEEECCTTCCS---------EEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEE
T ss_pred cCCceeEEEEecCCCCC---------EEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEe
Confidence 899999999999986 6 8999999999999998763 34566777 999999999999999999999
Q ss_pred CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEe---ecCCCCeEEEEECCCC
Q 036605 93 TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKF---SDDVGPLQYVSASDGA 167 (340)
Q Consensus 93 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~---~~~~~~v~~~~~s~~~ 167 (340)
.||.|++||+.++.....+.+|...|.+++|+|++.+|++++.+ |++||+......... .+|...|.+++|+|++
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 99999999999999999999999999999999999999886655 999998765333222 4688899999999987
Q ss_pred --CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccCCC
Q 036605 168 --KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDEKT 244 (340)
Q Consensus 168 --~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~~~ 244 (340)
..+++++. |+.|++||++ ..+....+. .|...+..+ .+ +|++.+|++++.||.|++||+.+++.+..+
T Consensus 530 ~~~~l~s~s~-d~~v~vwd~~--~~~~~~~~~---~h~~~v~~v--~~-spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 530 LQPTIVSASW-DKTVKVWNLS--NCKLRSTLA---GHTGYVSTV--AV-SPDGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp SSCEEEEEET-TSCEEEEETT--TCCEEEEEC---CCSSCEEEE--EE-CTTSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred CcceEEEEeC-CCeEEEEECC--CCcEEEEEc---CCCCCEEEE--EE-eCCCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 57888777 9999999993 433332222 566666666 66 899999999999999999999987765533
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=2.6e-29 Score=218.90 Aligned_cols=225 Identities=12% Similarity=0.106 Sum_probs=182.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCee---EEEecCCCCCCeE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEM---KWKSTGRHPGGLA 77 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~---~~~~~~~h~~~v~ 77 (340)
|||+.+++....+... .|...|.+++|+|+++ +|++|+.||.|++||+..+.. ...+...|...|.
T Consensus 78 vwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~---------~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVIL--RINRAARCVRWAPNEK---------KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp EEEEETTEEEEEEECC--CCSSCEEEEEECTTSS---------EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred EEECCCCeeeeeEEee--cCCCceeEEEECCCCC---------EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCee
Confidence 5888888766555433 6889999999999999 999999999999999998762 3444344899999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeC------------------CCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--E
Q 036605 78 GLAFAKKGRSLHVVGTNGMASEMKS------------------EMGEVIREFKASEKPISSSAFLCEEKIFALASSE--V 137 (340)
Q Consensus 78 ~v~~~~~~~~l~s~~~dg~i~~wd~------------------~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i 137 (340)
+++|+|++++|++++.||.|++||+ ..++.+..+..|...+.+++|+|++.++++++.+ |
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 9999999999999999999999995 4678888898999999999999999999886554 9
Q ss_pred EEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCC--cc----------------------
Q 036605 138 RILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKT--VN---------------------- 193 (340)
Q Consensus 138 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~--~~---------------------- 193 (340)
++||+.+++.+..+..|...+.+++|+|++.+++++ . |+.|++|+++...+. ..
T Consensus 227 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 227 CLADADKKMAVATLASETLPLLAVTFITESSLVAAG-H-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp EEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-T-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred EEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-e-CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 999999999999999999999999999999877764 6 999999999531121 00
Q ss_pred ----C-C-------ceeeecCCCeeeeeecCCCCCCC---CEEEEEeCCCcEEEEECCCCCc
Q 036605 194 ----K-G-------PALSMRHSPVAIDCKNSPNGEDG---TVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 194 ----~-~-------~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
. . ..+...|...+..+ .+.++++ .+|++++.||.|++|++.+++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQI--SVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEE--EEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cccccccccCccccccccccccCCccee--EEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 0 0 11112566666666 4435777 9999999999999999987544
No 58
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-29 Score=214.84 Aligned_cols=205 Identities=14% Similarity=0.103 Sum_probs=174.6
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
+|...|++++|+|+++ +|++|+.||.|++||+.+++....+.+ |.+.|.+++|+|++++|++++.||.|+
T Consensus 30 ~h~~~v~~~~~s~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGD---------LLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp CCSSCEEEEEECTTSC---------EEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred EeeceEEEEEEcCCCC---------EEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 8999999999999999 999999999999999999999999988 999999999999999999999999999
Q ss_pred EEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec-------CcEEEEECCCCc-----------eeEEeecCCC--Ce
Q 036605 99 EMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS-------SEVRILSLENGE-----------EVLKFSDDVG--PL 158 (340)
Q Consensus 99 ~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-------~~i~i~d~~~~~-----------~~~~~~~~~~--~v 158 (340)
+||+.+++.+..+. +...+.+++|+|++.+++++. +.|++||+..+. .+..+..|.. .+
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999999988887 788999999999999998743 569999997653 3344555665 89
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.+++|+|++++|++++. |+.|++||++.. ......+. .|...+..+ .| ++++.+|++++.||.|++||+.++
T Consensus 179 ~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~-~~~~~~~~---~~~~~v~~~--~~-~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHK-DGKISKYDVSNN-YEYVDSID---LHEKSISDM--QF-SPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp EEEEECGGGCEEEEEET-TSEEEEEETTTT-TEEEEEEE---CCSSCEEEE--EE-CTTSSEEEEEETTSEEEEEETTTC
T ss_pred eEEEEcCCCCEEEEEcC-CCEEEEEECCCC-cEeEEEEe---cCCCceeEE--EE-CCCCCEEEEecCCceEEEEECCCC
Confidence 99999999999999887 999999998421 22222222 455555555 55 789999999999999999999986
Q ss_pred CccC
Q 036605 239 SQDE 242 (340)
Q Consensus 239 ~~~~ 242 (340)
+...
T Consensus 251 ~~~~ 254 (369)
T 3zwl_B 251 QVLK 254 (369)
T ss_dssp CEEE
T ss_pred ceee
Confidence 6554
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.5e-29 Score=219.16 Aligned_cols=221 Identities=17% Similarity=0.276 Sum_probs=175.9
Q ss_pred CccC----CCCc------eeeeeeCCC-C-----CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCee
Q 036605 1 IWST----NDGS------LLAEWKQPD-G-----EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEM 64 (340)
Q Consensus 1 vwd~----~~g~------~~~~~~~~~-~-----~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~ 64 (340)
|||+ .+++ ....+.... . +|...|++++|+|+++ +|++|+.||.|++|| .+++.
T Consensus 72 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---------~l~~~~~dg~i~i~~-~~~~~ 141 (425)
T 1r5m_A 72 LARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN---------SIVTGVENGELRLWN-KTGAL 141 (425)
T ss_dssp EEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS---------EEEEEETTSCEEEEE-TTSCE
T ss_pred EEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC---------EEEEEeCCCeEEEEe-CCCCe
Confidence 5777 7777 344444211 1 1678999999999999 999999999999999 66777
Q ss_pred EEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCC---------------eeEEEEccCCCE
Q 036605 65 KWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKP---------------ISSSAFLCEEKI 129 (340)
Q Consensus 65 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~---------------i~~l~~~~~~~~ 129 (340)
...+.. |...|.+++|+|+++.|++++.|+.|++||+.+++.+..+..+... +.+++|+|++.+
T Consensus 142 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (425)
T 1r5m_A 142 LNVLNF-HRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKF 220 (425)
T ss_dssp EEEECC-CCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEE
T ss_pred eeeccC-CCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEE
Confidence 888887 9999999999999999999999999999999999998888877766 999999998765
Q ss_pred EEE-ecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 130 FAL-ASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 130 l~~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
++. .++.|++||+.+++.+..+..|...|.+++|+|++.+|++++. |+.|++||++ .++....+. .|...+..
T Consensus 221 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~~~~~~---~~~~~i~~ 294 (425)
T 1r5m_A 221 VIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD-DGTLRIWHGG--NGNSQNCFY---GHSQSIVS 294 (425)
T ss_dssp EEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET-TSCEEEECSS--SBSCSEEEC---CCSSCEEE
T ss_pred EEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC-CCEEEEEECC--CCccceEec---CCCccEEE
Confidence 544 3344999999999888899999999999999999999999887 9999999984 433332222 45555555
Q ss_pred eecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 209 CKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+ .| ++++ ++++++.||.|++||+.+++.+.
T Consensus 295 ~--~~-~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 295 A--SW-VGDD-KVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp E--EE-ETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred E--EE-CCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence 5 55 6777 99999999999999998766544
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=5.5e-29 Score=216.82 Aligned_cols=213 Identities=12% Similarity=0.044 Sum_probs=176.8
Q ss_pred CccCCCCc--eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEe--cCCCCCCe
Q 036605 1 IWSTNDGS--LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKS--TGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~--~~~h~~~v 76 (340)
|||+.+++ .+..+. +|...|++++|+|+++ +|++|+.||.|++||+.+++....+ .. |...|
T Consensus 34 i~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~v 99 (372)
T 1k8k_C 34 IYEKSGNKWVQVHELK----EHNGQVTGVDWAPDSN---------RIVTCGTDRNAYVWTLKGRTWKPTLVILR-INRAA 99 (372)
T ss_dssp EEEEETTEEEEEEEEE----CCSSCEEEEEEETTTT---------EEEEEETTSCEEEEEEETTEEEEEEECCC-CSSCE
T ss_pred EEeCCCCcEEeeeeec----CCCCcccEEEEeCCCC---------EEEEEcCCCeEEEEECCCCeeeeeEEeec-CCCce
Confidence 68888887 677777 7899999999999999 9999999999999999998754443 44 89999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCeE---EEE-eecCCCCeeEEEEccCCCEEEEecC--cEEEEEC--------
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGEV---IRE-FKASEKPISSSAFLCEEKIFALASS--EVRILSL-------- 142 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~~~-~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~-------- 142 (340)
.+++|+|++++|++++.|+.|++||+..+.. ... ...|...|.+++|+|++.++++++. .|++||+
T Consensus 100 ~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 179 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 179 (372)
T ss_dssp EEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCC
T ss_pred eEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccc
Confidence 9999999999999999999999999988762 223 3567889999999999999988654 4999995
Q ss_pred ----------CCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecC
Q 036605 143 ----------ENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNS 212 (340)
Q Consensus 143 ----------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (340)
..++.+..+..|...|.+++|+|++.+|++++. |+.|++||++ .++....+. .+...+..+ .
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~~~~~~---~~~~~v~~~--~ 251 (372)
T 1k8k_C 180 PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH-DSTVCLADAD--KKMAVATLA---SETLPLLAV--T 251 (372)
T ss_dssp CCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET-TTEEEEEEGG--GTTEEEEEE---CSSCCEEEE--E
T ss_pred ccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC-CCEEEEEECC--CCceeEEEc---cCCCCeEEE--E
Confidence 467778888899999999999999999999887 9999999994 444333332 444445554 5
Q ss_pred CCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 213 PNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 213 ~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
| ++++.+++++ .||.|++|++..
T Consensus 252 ~-~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 252 F-ITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp E-EETTEEEEEE-TTSSCEEEEEET
T ss_pred E-ecCCCEEEEE-eCCeEEEEEccC
Confidence 5 7888888777 899999999987
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-28 Score=211.94 Aligned_cols=217 Identities=13% Similarity=0.064 Sum_probs=182.5
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++.+..+. +|...|++++|+|+++ +|++++.||.|++||+.+++....+. |...|.+++
T Consensus 58 vwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~ 122 (369)
T 3zwl_B 58 VWYSLNGERLGTLD----GHTGTIWSIDVDCFTK---------YCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVE 122 (369)
T ss_dssp EEETTTCCEEEEEC----CCSSCEEEEEECTTSS---------EEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEE
T ss_pred EEeCCCchhhhhhh----hcCCcEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEE
Confidence 69999999998887 8999999999999999 99999999999999999999888877 788999999
Q ss_pred EecCCCEEEEEeCC-----CcEEEEeCCCCe-----------EEEEeecCCC--CeeEEEEccCCCEEEEecCc--EEEE
Q 036605 81 FAKKGRSLHVVGTN-----GMASEMKSEMGE-----------VIREFKASEK--PISSSAFLCEEKIFALASSE--VRIL 140 (340)
Q Consensus 81 ~~~~~~~l~s~~~d-----g~i~~wd~~~~~-----------~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~~--i~i~ 140 (340)
|+|+++.|++++.+ +.|.+||+..+. ....+..+.. .+.+++|+|+++++++++.+ |++|
T Consensus 123 ~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 202 (369)
T 3zwl_B 123 FSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKY 202 (369)
T ss_dssp ECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred EccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEE
Confidence 99999999999999 999999987653 2333445555 89999999999999886554 9999
Q ss_pred ECCC-CceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCC
Q 036605 141 SLEN-GEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGT 219 (340)
Q Consensus 141 d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (340)
|+.+ ++.+..+..|...|.+++|+|++.+|++++. |+.|++||++ .++....+ .+...+..+ .+ ++++.
T Consensus 203 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~--~~~~~~~~----~~~~~~~~~--~~-~~~~~ 272 (369)
T 3zwl_B 203 DVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR-DTNSFLVDVS--TLQVLKKY----ETDCPLNTA--VI-TPLKE 272 (369)
T ss_dssp ETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET-TSEEEEEETT--TCCEEEEE----ECSSCEEEE--EE-CSSSS
T ss_pred ECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC-CceEEEEECC--CCceeeee----cCCCCceeE--Ee-cCCCc
Confidence 9998 6778888999999999999999999999887 9999999983 43332222 233334444 45 89999
Q ss_pred EEEEEeCCC--------------cEEEEECCCCCccC
Q 036605 220 VILAVAESG--------------VAYSWDLKTVSQDE 242 (340)
Q Consensus 220 ~l~~~s~dg--------------~i~vwd~~~~~~~~ 242 (340)
++++++.++ .+++||..+++.+.
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 309 (369)
T 3zwl_B 273 FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG 309 (369)
T ss_dssp EEEEEECCC-------------CEEEEEETTTCCEEE
T ss_pred eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh
Confidence 999999998 89999998876655
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=3.2e-29 Score=220.43 Aligned_cols=218 Identities=13% Similarity=0.116 Sum_probs=176.8
Q ss_pred CccCCCCce-----eeeeeCCCCCC-----CCCeEEEEee----ccccccccccCceE-EEEEcCCCcEEEEEccC----
Q 036605 1 IWSTNDGSL-----LAEWKQPDGEP-----VVSYSCLACG----FVGKKRRKERGTLL-LALGTSNGDILAVDVLT---- 61 (340)
Q Consensus 1 vwd~~~g~~-----~~~~~~~~~~~-----~~~v~~l~~s----p~~~~~~~~~~~~~-l~~g~~dg~i~i~d~~~---- 61 (340)
|||+.+++. ...+. .| ...|.+++|+ |+++ + |++|+.||.|++||+.+
T Consensus 95 iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~---------~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLD----LLDSDMKKHSFWALKWGASNDRLLS---------HRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEECTTTCCEEEEEEC----CSCTTGGGSCEEEEEEECCC----C---------EEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEccCCcccccccceeec----ccccccCCCcEEEEEEeeccCCCCc---------eEEEEEeCCCcEEEEeCCccccc
Confidence 588877775 66665 55 6899999999 9998 8 99999999999999998
Q ss_pred --CeeEE-----Eec------CCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeec---C---CCCeeEEE
Q 036605 62 --GEMKW-----KST------GRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKA---S---EKPISSSA 122 (340)
Q Consensus 62 --~~~~~-----~~~------~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~---~---~~~i~~l~ 122 (340)
++.+. .+. ..|...|.+++|+|++ .|++++.||.|++||+++++.+..+.. | ...+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 55444 442 2388899999999999 999999999999999999999999988 8 89999999
Q ss_pred EccCCCEEEEec-----CcEEEEECCCCceeEEeec-------------CCCCeEEEEECCCCCEEEEEEcCCCeEEEEE
Q 036605 123 FLCEEKIFALAS-----SEVRILSLENGEEVLKFSD-------------DVGPLQYVSASDGAKIIITAGYGEKHLQVWR 184 (340)
Q Consensus 123 ~~~~~~~l~~~~-----~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd 184 (340)
|+|++.+|++++ +.|++||+.+++.+..+.. |...|.+++|+|++.+|++++. |+.|++||
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd 319 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-DGKLRFWD 319 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-TSEEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-CCeEEEEE
Confidence 999999998843 5699999999999999988 9999999999999999999887 99999999
Q ss_pred ccCCCCCccCCceee---ecC---------------CCeeeeeecCCCCCCC----------CEEEEEeCCCcEEEEECC
Q 036605 185 CDISSKTVNKGPALS---MRH---------------SPVAIDCKNSPNGEDG----------TVILAVAESGVAYSWDLK 236 (340)
Q Consensus 185 ~~~~~~~~~~~~~~~---~~~---------------~~~~~~~~~~~~~~~~----------~~l~~~s~dg~i~vwd~~ 236 (340)
++ .++....+... ..| ...+..+ .| ++++ .+|++++.||.|++|++.
T Consensus 320 ~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~--~~-~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 320 VK--TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV--KF-LKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TT--TTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE--EE-ECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred cC--CCceeEEEecccCcccchhhhhccccccccccCCceeEE--Ee-ccccccccccccccceEEEecCCCcEEEEEcC
Confidence 93 44332222100 023 4555555 55 6777 799999999999999987
Q ss_pred CC
Q 036605 237 TV 238 (340)
Q Consensus 237 ~~ 238 (340)
++
T Consensus 395 ~g 396 (397)
T 1sq9_A 395 GG 396 (397)
T ss_dssp C-
T ss_pred CC
Confidence 65
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=6.9e-29 Score=237.84 Aligned_cols=219 Identities=15% Similarity=0.159 Sum_probs=189.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+|+.+..+. .|...|++++|+|+++ +|++|+.||.|++||+.+++....+.+ |.+.|++++
T Consensus 39 iwd~~~~~~~~~~~----~~~~~v~~~~~s~~~~---------~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~ 104 (814)
T 3mkq_A 39 IWNYETQVEVRSIQ----VTETPVRAGKFIARKN---------WIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIA 104 (814)
T ss_dssp EEETTTTEEEEEEE----CCSSCEEEEEEEGGGT---------EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEE
T ss_pred EEECCCCceEEEEe----cCCCcEEEEEEeCCCC---------EEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEE
Confidence 69999999999888 7899999999999999 999999999999999999999999988 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCC-eEEEEeecCCCCeeEEEEcc-CCCEEEEec--CcEEEEECCCCceeEEeecCC-
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMG-EVIREFKASEKPISSSAFLC-EEKIFALAS--SEVRILSLENGEEVLKFSDDV- 155 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~--~~i~i~d~~~~~~~~~~~~~~- 155 (340)
|+|++..|++++.||.|++||+.++ .....+..|...+.+++|+| ++..+++++ +.|++||+.++.....+..+.
T Consensus 105 ~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 184 (814)
T 3mkq_A 105 VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE 184 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCT
T ss_pred EeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCC
Confidence 9999999999999999999999987 66777888999999999999 788888765 449999999888877776555
Q ss_pred CCeEEEEECC--CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEE
Q 036605 156 GPLQYVSASD--GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSW 233 (340)
Q Consensus 156 ~~v~~~~~s~--~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vw 233 (340)
..+..++|+| ++.++++++. |+.|++||+ ..+.....+. .|...+..+ .| +|++.++++++.||.|++|
T Consensus 185 ~~v~~~~~~~~~~~~~l~~~~~-dg~i~~~d~--~~~~~~~~~~---~~~~~v~~~--~~-~~~~~~l~~~~~dg~v~vw 255 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMITASD-DLTIKIWDY--QTKSCVATLE---GHMSNVSFA--VF-HPTLPIIISGSEDGTLKIW 255 (814)
T ss_dssp TCCCEEEECCSTTCCEEEEECT-TSEEEEEET--TTTEEEEEEE---CCSSCEEEE--EE-CSSSSEEEEEETTSCEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEeC-CCEEEEEEC--CCCcEEEEEc---CCCCCEEEE--EE-cCCCCEEEEEeCCCeEEEE
Confidence 8899999999 9999999777 999999998 3444333222 455555555 55 8999999999999999999
Q ss_pred ECCCCCccC
Q 036605 234 DLKTVSQDE 242 (340)
Q Consensus 234 d~~~~~~~~ 242 (340)
|+.+++...
T Consensus 256 d~~~~~~~~ 264 (814)
T 3mkq_A 256 NSSTYKVEK 264 (814)
T ss_dssp ETTTCSEEE
T ss_pred ECCCCcEEE
Confidence 998866544
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.7e-30 Score=231.00 Aligned_cols=213 Identities=11% Similarity=-0.000 Sum_probs=172.5
Q ss_pred CccCCCCcee----eeeeCCCCCCCCCeEEEEeecc------ccccccccCceEEEEEcCCCcEEEEEccCCee------
Q 036605 1 IWSTNDGSLL----AEWKQPDGEPVVSYSCLACGFV------GKKRRKERGTLLLALGTSNGDILAVDVLTGEM------ 64 (340)
Q Consensus 1 vwd~~~g~~~----~~~~~~~~~~~~~v~~l~~sp~------~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~------ 64 (340)
|||+.++++. ..+. +|...|.+++|+|+ +. +||+|+.||+|++||+.++..
T Consensus 187 iWd~~~~~~~~~~~~~l~----~~~~~V~~v~wsp~~~~~~~~~---------~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 187 IFKMNTSTLHCVKVQTIV----HSFGEVWDLKWHEGCHAPHLVG---------CLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp EEEEETTTCCEEEEEEEE----ECCCSEEEEEECSSCCCSSSSC---------EEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred EEEccCCCCCceEEEEEE----ecCCcEEEEEECCCCCCCCCCc---------eEEEEecCCeEEEEEcCCCccccccce
Confidence 6888777643 2344 67889999999997 35 899999999999999987642
Q ss_pred -----EEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCe-EEEEeecCCCCeeEE--EEccCC-CEEEEecC
Q 036605 65 -----KWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGE-VIREFKASEKPISSS--AFLCEE-KIFALASS 135 (340)
Q Consensus 65 -----~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~~i~~l--~~~~~~-~~l~~~~~ 135 (340)
...+.+ |.+.|++++|+++ ..|++|+.||.|++||+.++. +...+..|...|.++ +++|++ .+|++++.
T Consensus 254 ~~~~p~~~l~~-h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 254 MCEKPSLTLSL-ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCCSCSEEECC-TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eecCceEEEEc-CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 235666 9999999999985 489999999999999999763 455688999999999 568887 88888655
Q ss_pred c--EEEEECCCCceeEEeecCCC--CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeec
Q 036605 136 E--VRILSLENGEEVLKFSDDVG--PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKN 211 (340)
Q Consensus 136 ~--i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (340)
+ |++||+++++.+..+.+|.. .|.+++|+|++..+++++. |++|++||++ .+.....+. +|...+..+
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~-d~tv~lwd~~--~~~~~~~l~---gH~~~V~sv-- 403 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG-ASSLRAVPSR--AAFAVHPLV---SRETTITAI-- 403 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECS-SSEEEEEETT--CTTCCEEEE---ECSSCEEEE--
T ss_pred CCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCC-CCcEEEEECc--ccccceeee---cCCCceEEE--
Confidence 4 99999999887777766653 5789999999999888777 9999999984 333323233 677778777
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 212 SPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 212 ~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.| +|++.+|++|+.||.|++||+..
T Consensus 404 a~-Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 404 GV-SRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EC-CSSCCBCEEEETTTEEECCBSCS
T ss_pred Ee-CCCCCeEEEEECCCEEEEEechH
Confidence 77 89999999999999999999865
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.9e-28 Score=234.75 Aligned_cols=212 Identities=13% Similarity=0.072 Sum_probs=180.1
Q ss_pred eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEE
Q 036605 9 LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSL 88 (340)
Q Consensus 9 ~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l 88 (340)
+...+. +|...|+|++|+|+++ +|++|+.||.|++||+.+++....+.. |.+.|.+++|+|++++|
T Consensus 5 ~~~~~~----~h~~~v~~i~~sp~~~---------~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l 70 (814)
T 3mkq_A 5 IKKTFS----NRSDRVKGIDFHPTEP---------WVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKNWI 70 (814)
T ss_dssp CEEEEE----EECSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEE
T ss_pred cceeee----cCCCceEEEEECCCCC---------EEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCCEE
Confidence 345566 7899999999999999 999999999999999999999999998 99999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCC-ceeEEeecCCCCeEEEEECC
Q 036605 89 HVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENG-EEVLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 89 ~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~ 165 (340)
++++.||.|++||+.+++.+..+..|...|.+++|+|++.++++++.+ |++||+.++ .....+.+|...|.+++|+|
T Consensus 71 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred EEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 999999999999999999999999999999999999999999886544 999999987 56677889999999999999
Q ss_pred -CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCC--CCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 166 -GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGE--DGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 166 -~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
++..|++++. |+.|++||++ .+.... .+...+...+..+ .| ++ ++.++++++.||.|++||+.+++...
T Consensus 151 ~~~~~l~~~~~-dg~v~vwd~~--~~~~~~--~~~~~~~~~v~~~--~~-~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 151 KDPSTFASGCL-DRTVKVWSLG--QSTPNF--TLTTGQERGVNYV--DY-YPLPDKPYMITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp TEEEEEEEEET-TSEEEEEETT--CSSCSE--EEECCCTTCCCEE--EE-CCSTTCCEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCCCEEEEEeC-CCeEEEEECC--CCccee--EEecCCCCCEEEE--EE-EECCCCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 7888888777 9999999983 333222 2222232333333 33 44 89999999999999999998766544
No 66
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=9.3e-28 Score=206.47 Aligned_cols=213 Identities=15% Similarity=0.182 Sum_probs=176.1
Q ss_pred CceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCe-----eEEEecCCCCCCeEEEE
Q 036605 7 GSLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGE-----MKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 7 g~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-----~~~~~~~~h~~~v~~v~ 80 (340)
.++..+++ +|...|+|++|+|++ + +|++|+.||+|++||+.+++ ....+.+ |...|.+++
T Consensus 28 ~~l~~tL~----GH~~~V~~v~~sp~~~~---------~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~ 93 (340)
T 4aow_A 28 MTLRGTLK----GHNGWVTQIATTPQFPD---------MILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVV 93 (340)
T ss_dssp EEEEEEEC----CCSSCEEEEEECTTCTT---------EEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEE
T ss_pred eEEEEEEC----CccCCEEEEEEeCCCCC---------EEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEE
Confidence 34555676 899999999999984 7 99999999999999987654 4556777 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCcee-EEeecCCCC
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEV-LKFSDDVGP 157 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~-~~~~~~~~~ 157 (340)
|+|++++|++++.|+.|++|+............+...+..+.+++++.++++++.+ +++||+...... ..+.+|...
T Consensus 94 ~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 94 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred ECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc
Confidence 99999999999999999999999999888888888899999999999999886554 999999776544 445788899
Q ss_pred eEEEEECCCC--CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 158 LQYVSASDGA--KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 158 v~~~~~s~~~--~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
+..++|++++ .++++++. |+.|++||+ ..++....+. .|...+..+ .+ +|++.+|++++.||.|++||+
T Consensus 174 v~~~~~~~~~~~~~~~s~~~-d~~i~i~d~--~~~~~~~~~~---~h~~~v~~~--~~-s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGW-DKLVKVWNL--ANCKLKTNHI---GHTGYLNTV--TV-SPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp EEEEEECSCSSSCEEEEEET-TSCEEEEET--TTTEEEEEEC---CCSSCEEEE--EE-CTTSSEEEEEETTCEEEEEET
T ss_pred ccceEEccCCCCcEEEEEcC-CCEEEEEEC--CCCceeeEec---CCCCcEEEE--EE-CCCCCEEEEEeCCCeEEEEEe
Confidence 9999998764 45677666 999999998 3443333222 566666665 56 899999999999999999999
Q ss_pred CCCCccC
Q 036605 236 KTVSQDE 242 (340)
Q Consensus 236 ~~~~~~~ 242 (340)
.+.+.+.
T Consensus 245 ~~~~~~~ 251 (340)
T 4aow_A 245 NEGKHLY 251 (340)
T ss_dssp TTTEEEE
T ss_pred ccCceee
Confidence 8866554
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=2.2e-28 Score=219.70 Aligned_cols=212 Identities=12% Similarity=0.143 Sum_probs=180.2
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++.+..+. +|...|++++|+|++. |++|+.||+|++||+.+++....+.+ |.+.|.+++
T Consensus 146 vwd~~~~~~~~~~~----~h~~~V~~l~~~~~~~----------l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~ 210 (464)
T 3v7d_B 146 VYDSINKKFLLQLS----GHDGGVWALKYAHGGI----------LVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLD 210 (464)
T ss_dssp EEETTTTEEEEEEC----CCSSCEEEEEECSTTE----------EEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEE
T ss_pred EEECCCCcEEEEEe----CCCcCEEEEEEcCCCE----------EEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEE
Confidence 69999999998888 8999999999998766 99999999999999999999999988 999999999
Q ss_pred Ee--cCCCEEEEEeCCCcEEEEeCCCCeE-----------------------EEEeecCCCCeeEEEEccCCCEEEEecC
Q 036605 81 FA--KKGRSLHVVGTNGMASEMKSEMGEV-----------------------IREFKASEKPISSSAFLCEEKIFALASS 135 (340)
Q Consensus 81 ~~--~~~~~l~s~~~dg~i~~wd~~~~~~-----------------------~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 135 (340)
|+ +++..|++++.|+.|++||+.++.. +..+.+|...+.++ ++++.++++++.
T Consensus 211 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~ 288 (464)
T 3v7d_B 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY 288 (464)
T ss_dssp EEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET
T ss_pred EecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC
Confidence 98 5778999999999999999987652 34566777777766 677888888654
Q ss_pred c--EEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCC
Q 036605 136 E--VRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSP 213 (340)
Q Consensus 136 ~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (340)
+ |++||+.+++.+..+.+|...|.+++|+|++.++++++. |+.|++||+ .+++....+. .|...+..+ .+
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-dg~i~vwd~--~~~~~~~~~~---~h~~~v~~~--~~ 360 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM-DTTIRIWDL--ENGELMYTLQ---GHTALVGLL--RL 360 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET-TSCEEEEET--TTTEEEEEEC---CCSSCEEEE--EE
T ss_pred CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC-CCcEEEEEC--CCCcEEEEEe---CCCCcEEEE--EE
Confidence 4 999999999999999999999999999999999999888 999999998 4444433333 566666665 33
Q ss_pred CCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 214 NGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 214 ~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
++.++++++.||.|++||+.+...
T Consensus 361 ---~~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 361 ---SDKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp ---CSSEEEEEETTSEEEEEETTTCCE
T ss_pred ---cCCEEEEEeCCCcEEEEECCCCce
Confidence 368999999999999999987543
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.4e-29 Score=219.74 Aligned_cols=223 Identities=17% Similarity=0.143 Sum_probs=176.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccC----CeeEEEecCCCCCCe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLT----GEMKWKSTGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~----~~~~~~~~~~h~~~v 76 (340)
|||+.++........ ..|...|++++|+|+++ +|++|+.||.|++||+.+ .+....+.+ |.+.|
T Consensus 49 iw~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~---------~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v 116 (416)
T 2pm9_A 49 LWSLLAADSEKPIAS--LQVDSKFNDLDWSHNNK---------IIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSV 116 (416)
T ss_dssp EEESSSGGGCSCSCC--CCCSSCEEEEEECSSSS---------CEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCC
T ss_pred EEEccCCCCCcEEEE--EecCCceEEEEECCCCC---------eEEEEccCCeEEEeecccccccccchhhccC-Cccce
Confidence 578777653322221 15788999999999998 899999999999999987 346777777 99999
Q ss_pred EEEEEecC-CCEEEEEeCCCcEEEEeCCCCe------EEEE---eecCCCCeeEEEEccC-CCEEEEecCc--EEEEECC
Q 036605 77 AGLAFAKK-GRSLHVVGTNGMASEMKSEMGE------VIRE---FKASEKPISSSAFLCE-EKIFALASSE--VRILSLE 143 (340)
Q Consensus 77 ~~v~~~~~-~~~l~s~~~dg~i~~wd~~~~~------~~~~---~~~~~~~i~~l~~~~~-~~~l~~~~~~--i~i~d~~ 143 (340)
.+++|+|+ +.+|++++.|+.|++||+.+++ .... +..|...+.+++|+|+ +.++++++.+ |++||++
T Consensus 117 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp CEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 99999998 8999999999999999999886 3322 3568889999999999 7888886544 9999999
Q ss_pred CCceeEEeecC------CCCeEEEEECCCC-CEEEEEEcCCC---eEEEEEccCCCCCccCCceeeecCCCeeeeeecCC
Q 036605 144 NGEEVLKFSDD------VGPLQYVSASDGA-KIIITAGYGEK---HLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSP 213 (340)
Q Consensus 144 ~~~~~~~~~~~------~~~v~~~~~s~~~-~~l~s~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (340)
+++.+..+..+ ...+.+++|+|++ .++++++. |+ .|++||++.. ......+ ...|...+..+ .|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~~~i~~~d~~~~-~~~~~~~--~~~~~~~v~~~--~~ 270 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG-SDNDPSILIWDLRNA-NTPLQTL--NQGHQKGILSL--DW 270 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC-CSSSCCCCEEETTST-TSCSBCC--CSCCSSCEEEE--EE
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC-CCCCceEEEEeCCCC-CCCcEEe--ecCccCceeEE--Ee
Confidence 99888888766 7899999999997 56777666 88 9999999421 1211111 11355556655 56
Q ss_pred CCC-CCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 214 NGE-DGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 214 ~~~-~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+| ++.+|++++.||.|++||+.+++.+.
T Consensus 271 -s~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 271 -CHQDEHLLLSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp -CSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred -CCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence 66 89999999999999999998876554
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2.1e-28 Score=214.42 Aligned_cols=220 Identities=10% Similarity=0.068 Sum_probs=171.5
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC--CCCCCeE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG--RHPGGLA 77 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--~h~~~v~ 77 (340)
|||+.+++....+... +|...|++++|+| ++. +|++|+.||.|++||+.+. ....+.. .|...|.
T Consensus 100 iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~---------~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~ 167 (383)
T 3ei3_B 100 LWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTN---------QLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYC 167 (383)
T ss_dssp EEETTSTTCEEEECCC--STTCBEEEEEEETTEEE---------EEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEE
T ss_pred EEeCCCcccceeeecC--CcCCceeEEEeCCCCCC---------EEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeE
Confidence 6999988877766533 6899999999999 668 8999999999999999864 4445543 2458899
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEecCc--EEEEECCC----CceeEE
Q 036605 78 GLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALASSE--VRILSLEN----GEEVLK 150 (340)
Q Consensus 78 ~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~~--i~i~d~~~----~~~~~~ 150 (340)
+++|+|+++.|++++.|+.|++||+ +++.+..+..|...|.+++|+|++. ++++++.+ |++||+++ +..+..
T Consensus 168 ~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 168 CVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE
T ss_pred EEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE
Confidence 9999999999999999999999999 5778888999999999999999998 78876544 99999987 555555
Q ss_pred eecCCCCeEEEEECC-CCCEEEEEEcCCCeEEEEEccCCCCCccCCceee----ecCCC----------eeeeeecCCCC
Q 036605 151 FSDDVGPLQYVSASD-GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALS----MRHSP----------VAIDCKNSPNG 215 (340)
Q Consensus 151 ~~~~~~~v~~~~~s~-~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~----------~~~~~~~~~~~ 215 (340)
+ .|...|.+++|+| ++.+|++++. |+.|++||++ .+.....+... ..+.. ....+ .+ +
T Consensus 247 ~-~~~~~v~~~~~s~~~~~~l~~~~~-d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~-s 319 (383)
T 3ei3_B 247 M-PHEKPVNAAYFNPTDSTKLLTTDQ-RNEIRVYSSY--DWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVA--GR-Y 319 (383)
T ss_dssp E-ECSSCEEEEEECTTTSCEEEEEES-SSEEEEEETT--BTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEE--EC-B
T ss_pred e-cCCCceEEEEEcCCCCCEEEEEcC-CCcEEEEECC--CCccccccccccccccccccceEEeccCCCCceEE--Ee-c
Confidence 5 6999999999999 9999999887 9999999994 33322222100 00110 11111 23 4
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 216 EDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 216 ~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+++.+ +++.||.|++||+.+++.+.
T Consensus 320 ~dg~~--s~s~d~~i~iwd~~~~~~~~ 344 (383)
T 3ei3_B 320 PDDQL--LLNDKRTIDIYDANSGGLVH 344 (383)
T ss_dssp CCTTT--CTTCCCCEEEEETTTCCEEE
T ss_pred CCccc--ccCCCCeEEEEecCCCceee
Confidence 55555 67789999999998876654
No 70
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-29 Score=220.39 Aligned_cols=219 Identities=13% Similarity=0.172 Sum_probs=179.8
Q ss_pred CccCCC----CceeeeeeCCCCCCCCCeEEEEeecc-ccccccccCceEEEEEcCCCcEEEEEccCCe------eEEEe-
Q 036605 1 IWSTND----GSLLAEWKQPDGEPVVSYSCLACGFV-GKKRRKERGTLLLALGTSNGDILAVDVLTGE------MKWKS- 68 (340)
Q Consensus 1 vwd~~~----g~~~~~~~~~~~~~~~~v~~l~~sp~-~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~------~~~~~- 68 (340)
|||+.+ ......+. .|...|++++|+|+ ++ +|++|+.||.|++||+.+++ ....+
T Consensus 93 vw~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~---------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 159 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFS----NHSSSVKTVKFNAKQDN---------VLASGGNNGEIFIWDMNKCTESPSNYTPLTPG 159 (416)
T ss_dssp EECCSSTTSCCCEEEECC----CSSSCCCEEEECSSSTT---------BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC
T ss_pred Eeecccccccccchhhcc----CCccceEEEEEcCCCCC---------EEEEEcCCCeEEEEECCCCccccccccccccc
Confidence 588876 34556665 79999999999998 67 89999999999999999876 33332
Q ss_pred --cCCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEeCCCCeEEEEeecC------CCCeeEEEEccCC-CEEEEe--cC-
Q 036605 69 --TGRHPGGLAGLAFAKK-GRSLHVVGTNGMASEMKSEMGEVIREFKAS------EKPISSSAFLCEE-KIFALA--SS- 135 (340)
Q Consensus 69 --~~~h~~~v~~v~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~------~~~i~~l~~~~~~-~~l~~~--~~- 135 (340)
.. |...|.+++|+|+ +..|++++.|+.|++||+.+++.+..+..+ ...+.+++|+|++ .+++++ ++
T Consensus 160 ~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 160 QSMS-SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp CSCC-SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred cccC-CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 44 8999999999998 789999999999999999999998888776 7889999999997 567663 33
Q ss_pred --cEEEEECCCC-ceeEEee-cCCCCeEEEEECC-CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeee
Q 036605 136 --EVRILSLENG-EEVLKFS-DDVGPLQYVSASD-GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCK 210 (340)
Q Consensus 136 --~i~i~d~~~~-~~~~~~~-~~~~~v~~~~~s~-~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (340)
.|++||++++ ..+..+. +|...|.+++|+| ++.+|++++. |+.|++||+ .+++....+. .|...+..+
T Consensus 239 ~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-dg~v~~wd~--~~~~~~~~~~---~~~~~v~~~- 311 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR-DNTVLLWNP--ESAEQLSQFP---ARGNWCFKT- 311 (416)
T ss_dssp SCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES-SSEEEEECS--SSCCEEEEEE---CSSSCCCCE-
T ss_pred CceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC-CCCEEEeeC--CCCccceeec---CCCCceEEE-
Confidence 7999999986 5667777 8999999999999 8999999888 999999998 4444433333 555555555
Q ss_pred cCCCCCCC-CEEEEEeCCCcEEEEECCCCCccC
Q 036605 211 NSPNGEDG-TVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 211 ~~~~~~~~-~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.| +|++ .+|++++.||.|++|++.......
T Consensus 312 -~~-s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 312 -KF-APEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp -EE-CTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred -EE-CCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 56 7887 899999999999999998865443
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.8e-27 Score=211.15 Aligned_cols=223 Identities=15% Similarity=0.239 Sum_probs=180.2
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+|++...+... +|...|+|++|+|+|+ +||+|+.||.|++||+.+++.+..+.+ |...+.+++
T Consensus 129 lWd~~tg~~~~~~~~~--~~~~~V~sv~fspdg~---------~lasgs~Dg~v~iWd~~~~~~~~~~~~-h~~~v~~~s 196 (420)
T 4gga_A 129 LWSASSGDILQLLQME--QPGEYISSVAWIKEGN---------YLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLS 196 (420)
T ss_dssp EEETTTCCEEEEEECC--STTCCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEE
T ss_pred EEECCCCCEEEEEEec--CCCCcEEEEEECCCCC---------EEEEEECCCeEEEEEcCCCcEEEEEeC-CCCceEEEe
Confidence 6999999988877744 6788999999999999 999999999999999999999999988 999999988
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCC-eEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCce----eEEeec
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMG-EVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEE----VLKFSD 153 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~----~~~~~~ 153 (340)
|+ +..|++|+.|+.+.+||.... ..+..+.+|...+..+.++|++.++++++.+ +++|+..+++. +..+..
T Consensus 197 ~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~ 274 (420)
T 4gga_A 197 WN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 274 (420)
T ss_dssp EE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC
T ss_pred eC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecc
Confidence 85 679999999999999998864 4556788999999999999999999986654 99999987653 456678
Q ss_pred CCCCeEEEEECCCCCEEEEE--EcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEe--CCCc
Q 036605 154 DVGPLQYVSASDGAKIIITA--GYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVA--ESGV 229 (340)
Q Consensus 154 ~~~~v~~~~~s~~~~~l~s~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s--~dg~ 229 (340)
|...|.+++|+|++..+++. +..|+.|++||+ .++.....+ .....+..+ .+ .+++..+++++ .||.
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~--~t~~~~~~~----~~~~~v~~~--~~-~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV--CSGACLSAV----DAHSQVCSI--LW-SPHYKELISGHGFAQNQ 345 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET--TTTEEEEEE----ECSSCEEEE--EE-ETTTTEEEEEECTTTCC
T ss_pred cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC--Cccccceee----ccccceeee--ee-cCCCCeEEEEEecCCCE
Confidence 89999999999987655432 345999999998 444433222 223333333 44 67777777665 7899
Q ss_pred EEEEECCCCCccCCCCC
Q 036605 230 AYSWDLKTVSQDEKTNP 246 (340)
Q Consensus 230 i~vwd~~~~~~~~~~~p 246 (340)
|+|||+.+++.+..+..
T Consensus 346 I~iwd~~~~~~v~~l~g 362 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKG 362 (420)
T ss_dssp EEEEETTTCCEEEEECC
T ss_pred EEEEECCCCcEEEEEcC
Confidence 99999998877664443
No 72
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=6.1e-28 Score=205.67 Aligned_cols=218 Identities=20% Similarity=0.295 Sum_probs=176.1
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC----------
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG---------- 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~---------- 70 (340)
|||+.+|+++..+... +|...|+|++|+|+++ +|++|+.||+|++||+++++.+..+.+
T Consensus 49 iWd~~tg~~~~~~~~~--~~~~~V~~v~~~~~~~---------~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~ 117 (318)
T 4ggc_A 49 LWSASSGDILQLLQME--QPGEYISSVAWIKEGN---------YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW 117 (318)
T ss_dssp EEETTTCCEEEEEECC--STTCCEEEEEECTTSS---------EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEECCCCCEEEEEEec--CCCCeEEEEEECCCCC---------EEEEEECCCcEEEeecCCceeEEEecCccceEEEeec
Confidence 6999999999888744 7888999999999999 999999999999999998876544321
Q ss_pred ------------------------------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeE----EEEeecCCC
Q 036605 71 ------------------------------RHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEV----IREFKASEK 116 (340)
Q Consensus 71 ------------------------------~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~----~~~~~~~~~ 116 (340)
.|...+..+.|+++++.|++++.|+.|++||+.+++. ......+..
T Consensus 118 ~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 197 (318)
T 4ggc_A 118 NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 197 (318)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS
T ss_pred CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC
Confidence 2667788889999999999999999999999987653 334556778
Q ss_pred CeeEEEEccCCCEEE-E--ec--CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEE-cCCCeEEEEEccCCCC
Q 036605 117 PISSSAFLCEEKIFA-L--AS--SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAG-YGEKHLQVWRCDISSK 190 (340)
Q Consensus 117 ~i~~l~~~~~~~~l~-~--~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~~d~~i~iwd~~~~~~ 190 (340)
.+.+++++|++..++ . ++ +.|++||.......... .+...+..+.|++++..+++++ ..|+.|+|||+ .++
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~--~~~ 274 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY--PTM 274 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET--TTC
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEEC--CCC
Confidence 899999999875443 2 32 23999999988665544 4677899999999999888765 34899999999 455
Q ss_pred CccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 191 TVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
+....+. +|...+..+ .| +|++.+|++|+.||.|+|||+...
T Consensus 275 ~~~~~l~---gH~~~V~~l--~~-spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 275 AKVAELK---GHTSRVLSL--TM-SPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEEC---CCSSCEEEE--EE-CTTSSCEEEEETTTEEEEECCSCC
T ss_pred cEEEEEc---CCCCCEEEE--EE-cCCCCEEEEEecCCeEEEEECCCC
Confidence 5554444 687777777 67 899999999999999999998653
No 73
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=3.9e-28 Score=213.84 Aligned_cols=224 Identities=13% Similarity=0.083 Sum_probs=178.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEec----------
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKST---------- 69 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~---------- 69 (340)
||+...++....+. +|...|+|++|+| +++ +|++|+.||.|++||+.+++....+.
T Consensus 27 v~~~~~~~~~~~~~----~h~~~v~~~~~s~~~~~---------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 93 (408)
T 4a11_B 27 VLGLELNKDRDVER----IHGGGINTLDIEPVEGR---------YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRD 93 (408)
T ss_dssp HHTEEECTTEEECC----CCSSCEEEEEECTTTCC---------EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTT
T ss_pred eeccccCcceeeee----ccCCcEEEEEEecCCCC---------EEEEEcCCCeEEEEECCCCcccceEecccccccccc
Confidence 46777777777666 7999999999999 999 99999999999999999876443332
Q ss_pred --CCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCC---CEEEEecC--cEEEEE
Q 036605 70 --GRHPGGLAGLAFAK-KGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEE---KIFALASS--EVRILS 141 (340)
Q Consensus 70 --~~h~~~v~~v~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~--~i~i~d 141 (340)
..|...|.+++|+| ++..|++++.||.|++||+.+++....+. +...+.++.++|.+ .++++++. .|++||
T Consensus 94 ~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 94 HPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp CTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 23899999999999 77899999999999999999999887776 67789999999854 47877544 499999
Q ss_pred CCCCceeEEeecCCCCeEEEEECCCCCE-EEEEEcCCCeEEEEEccCCCCCcc-----------CCceeeecCCCeeeee
Q 036605 142 LENGEEVLKFSDDVGPLQYVSASDGAKI-IITAGYGEKHLQVWRCDISSKTVN-----------KGPALSMRHSPVAIDC 209 (340)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~~d~~i~iwd~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 209 (340)
+.+++.+..+..|...|.+++|+|++.+ +++++. |+.|++||++....... ........|...+..+
T Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 173 LKSGSCSHILQGHRQEILAVSWSPRYDYILATASA-DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET-TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred CCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC-CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 9999999999999999999999999996 667666 99999999953221100 0000001445555555
Q ss_pred ecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 210 KNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 210 ~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.| +|++.+|++++.||.|++||+.+++...
T Consensus 252 --~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 252 --CF-TSDGLHLLTVGTDNRMRLWNSSNGENTL 281 (408)
T ss_dssp --EE-CTTSSEEEEEETTSCEEEEETTTCCBCC
T ss_pred --EE-cCCCCEEEEecCCCeEEEEECCCCccce
Confidence 56 7899999999999999999999866543
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=3.2e-28 Score=217.36 Aligned_cols=220 Identities=11% Similarity=0.133 Sum_probs=168.4
Q ss_pred CccCCCCc-----------eeeeeeCCCCCCC------------CCeEEEEeeccc--cccccccCceEEEEEcCCCcEE
Q 036605 1 IWSTNDGS-----------LLAEWKQPDGEPV------------VSYSCLACGFVG--KKRRKERGTLLLALGTSNGDIL 55 (340)
Q Consensus 1 vwd~~~g~-----------~~~~~~~~~~~~~------------~~v~~l~~sp~~--~~~~~~~~~~~l~~g~~dg~i~ 55 (340)
|||+.+++ +...+. +|. ..|++++|+|++ . +|++|+.||.|+
T Consensus 54 iw~~~~~~~~~~~~~~~~~~~~~~~----~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~---------~l~s~s~d~~i~ 120 (447)
T 3dw8_B 54 IFQQEQENKIQSHSRGEYNVYSTFQ----SHEPEFDYLKSLEIEEKINKIRWLPQKNAA---------QFLLSTNDKTIK 120 (447)
T ss_dssp EEEECC-----CCCCCCEEEEEEEE----CCCCEEEGGGTEEECCCCCEEEECCCCSSS---------EEEEEECSSCEE
T ss_pred EEEecCCCCCCcccccceeEecccc----cccccccccccccccCceEEEEEcCCCCcc---------eEEEeCCCCeEE
Confidence 58877766 466776 677 889999999998 6 899999999999
Q ss_pred EEEccCCeeE---------------------------------------EEecCCCCCCeEEEEEecCCCEEEEEeCCCc
Q 036605 56 AVDVLTGEMK---------------------------------------WKSTGRHPGGLAGLAFAKKGRSLHVVGTNGM 96 (340)
Q Consensus 56 i~d~~~~~~~---------------------------------------~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~ 96 (340)
+||+.++... ..+...|...|.+++|+|+++.|++| .|+.
T Consensus 121 iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~ 199 (447)
T 3dw8_B 121 LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLR 199 (447)
T ss_dssp EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSE
T ss_pred EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCe
Confidence 9998875432 12333499999999999999999998 7999
Q ss_pred EEEEeCCCC-eEEE-------EeecCCCCeeEEEEccCC-CEEEEecCc--EEEEECCCCce----eEEeecCCC-----
Q 036605 97 ASEMKSEMG-EVIR-------EFKASEKPISSSAFLCEE-KIFALASSE--VRILSLENGEE----VLKFSDDVG----- 156 (340)
Q Consensus 97 i~~wd~~~~-~~~~-------~~~~~~~~i~~l~~~~~~-~~l~~~~~~--i~i~d~~~~~~----~~~~~~~~~----- 156 (340)
|++||+.+. ..+. .+..|...|.+++|+|++ .++++++.+ |++||+++++. +..+..|..
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 279 (447)
T 3dw8_B 200 INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRS 279 (447)
T ss_dssp EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CC
T ss_pred EEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccc
Confidence 999999844 3433 255788999999999998 888886544 99999999876 677887775
Q ss_pred -------CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeee------------e-eecCCCCC
Q 036605 157 -------PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAI------------D-CKNSPNGE 216 (340)
Q Consensus 157 -------~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~ 216 (340)
.|.+++|+|++++|++++. +.|++||++. .++....+. .|..... . ....| +|
T Consensus 280 ~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~-~~~~~~~~~---~~~~~~~~l~~~~~~~~i~~~~~~~~-s~ 352 (447)
T 3dw8_B 280 FFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM-ENRPVETYQ---VHEYLRSKLCSLYENDCIFDKFECCW-NG 352 (447)
T ss_dssp HHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC-CSSCSCCEE---SCGGGTTTHHHHHHTSGGGCCCCEEE-CT
T ss_pred cccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC-Cccccceee---ccccccccccccccccccccceEEEE-CC
Confidence 8999999999999998554 9999999942 133333333 3321110 0 00145 89
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCcc
Q 036605 217 DGTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 217 ~~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
++.+|++|+.||.|++||+.+++.+
T Consensus 353 ~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 353 SDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp TSSEEEEECSTTEEEEEETTTCCEE
T ss_pred CCCEEEEeccCCEEEEEEcCCCcce
Confidence 9999999999999999999886543
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=3.1e-28 Score=210.79 Aligned_cols=221 Identities=13% Similarity=0.168 Sum_probs=176.8
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeecc---ccccccccCceEEEEEcCCCcEEEEEccCCe-eEEEecCCCCCCe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFV---GKKRRKERGTLLLALGTSNGDILAVDVLTGE-MKWKSTGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~---~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~~~h~~~v 76 (340)
|||+.+++...... .+|...|++++|+|+ +. +|++|+.||.|++||+.+++ ....+.+ |.+.|
T Consensus 48 iw~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~---------~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v 114 (357)
T 3i2n_A 48 LYEIQHGDLKLLRE---IEKAKPIKCGTFGATSLQQR---------YLATGDFGGNLHIWNLEAPEMPVYSVKG-HKEII 114 (357)
T ss_dssp EEEECSSSEEEEEE---EEESSCEEEEECTTCCTTTC---------CEEEEETTSCEEEECTTSCSSCSEEECC-CSSCE
T ss_pred EEeCCCCcccceee---ecccCcEEEEEEcCCCCCCc---------eEEEecCCCeEEEEeCCCCCccEEEEEe-cccce
Confidence 68998888765443 257899999999998 57 89999999999999999988 7788887 99999
Q ss_pred EEEEE------ecCCCEEEEEeCCCcEEEEeCCCCe-EEEEeecCCC----CeeEEE----EccCCCEEEEecC--cEEE
Q 036605 77 AGLAF------AKKGRSLHVVGTNGMASEMKSEMGE-VIREFKASEK----PISSSA----FLCEEKIFALASS--EVRI 139 (340)
Q Consensus 77 ~~v~~------~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~----~i~~l~----~~~~~~~l~~~~~--~i~i 139 (340)
.+++| +|+++.|++++.||.|++||+.+++ .+..+..+.. .+.+++ |+|++.++++++. .|++
T Consensus 115 ~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i 194 (357)
T 3i2n_A 115 NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKL 194 (357)
T ss_dssp EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEE
T ss_pred EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEE
Confidence 99955 6789999999999999999999887 6667765544 788888 7889999988654 4999
Q ss_pred EECCCCceeEEeecCCCCeEEEEECC---CCCEEEEEEcCCCeEEEEEccCCCCCccCCce--eeecCCCeeeeeecCCC
Q 036605 140 LSLENGEEVLKFSDDVGPLQYVSASD---GAKIIITAGYGEKHLQVWRCDISSKTVNKGPA--LSMRHSPVAIDCKNSPN 214 (340)
Q Consensus 140 ~d~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 214 (340)
||+++++.. ....|...|.+++|+| ++.++++++. |+.|++||++ .+.....+. ....|...+..+ .|
T Consensus 195 ~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~~--~~- 267 (357)
T 3i2n_A 195 FDLRNMALR-WETNIKNGVCSLEFDRKDISMNKLVATSL-EGKFHVFDMR--TQHPTKGFASVSEKAHKSTVWQV--RH- 267 (357)
T ss_dssp EETTTTEEE-EEEECSSCEEEEEESCSSSSCCEEEEEES-TTEEEEEEEE--EEETTTEEEEEEEECCSSCEEEE--EE-
T ss_pred EECccCcee-eecCCCCceEEEEcCCCCCCCCEEEEECC-CCeEEEEeCc--CCCcccceeeeccCCCcCCEEEE--EE-
Confidence 999998764 4466889999999999 8999999887 9999999994 333222221 112455566655 56
Q ss_pred CCCCC-EEEEEeCCCcEEEEECCCCCcc
Q 036605 215 GEDGT-VILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 215 ~~~~~-~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
+|++. ++++++.||.|++||+......
T Consensus 268 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 268 LPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp ETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred CCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 78887 8999999999999999875443
No 76
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=213.14 Aligned_cols=221 Identities=11% Similarity=0.071 Sum_probs=172.6
Q ss_pred CccCCCCc-eeeeeeCCCCCCCCCeEEEE------eeccccccccccCceEEEEEcCCCcEEEEEccCCe-eEEEecCCC
Q 036605 1 IWSTNDGS-LLAEWKQPDGEPVVSYSCLA------CGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-MKWKSTGRH 72 (340)
Q Consensus 1 vwd~~~g~-~~~~~~~~~~~~~~~v~~l~------~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~~~h 72 (340)
|||+.+++ ....+. .|...|.+++ |+|+++ +|++|+.||.|++||+.+++ ....+.. |
T Consensus 94 iwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~s~~~~---------~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~ 159 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVK----GHKEIINAIDGIGGLGIGEGAP---------EIVTGSRDGTVKVWDPRQKDDPVANMEP-V 159 (357)
T ss_dssp EECTTSCSSCSEEEC----CCSSCEEEEEEESGGGCC-CCC---------EEEEEETTSCEEEECTTSCSSCSEEECC-C
T ss_pred EEeCCCCCccEEEEE----ecccceEEEeeccccccCCCcc---------EEEEEeCCCeEEEEeCCCCCCcceeccc-c
Confidence 68998887 777777 8999999995 567888 89999999999999999886 5666654 4
Q ss_pred CC----CeEEEE----EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEcc---CCCEEEEecC--cEEE
Q 036605 73 PG----GLAGLA----FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLC---EEKIFALASS--EVRI 139 (340)
Q Consensus 73 ~~----~v~~v~----~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~---~~~~l~~~~~--~i~i 139 (340)
.+ .|.+++ |+|+++.|++++.||.|++||+++++.... ..+...+.+++|+| ++.++++++. .|++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 43 899998 678999999999999999999999987544 56788999999999 8999988654 4999
Q ss_pred EECCCCceeEEee-----cCCCCeEEEEECCCCC-EEEEEEcCCCeEEEEEccCCCCCcc--------------CCceee
Q 036605 140 LSLENGEEVLKFS-----DDVGPLQYVSASDGAK-IIITAGYGEKHLQVWRCDISSKTVN--------------KGPALS 199 (340)
Q Consensus 140 ~d~~~~~~~~~~~-----~~~~~v~~~~~s~~~~-~l~s~~~~d~~i~iwd~~~~~~~~~--------------~~~~~~ 199 (340)
||+++++.+..+. +|...|.+++|+|++. +|++++. |+.|++||++....... ..+...
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG-AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET-TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred EeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC-CCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 9998876655444 8999999999999998 6777776 99999999953221100 011112
Q ss_pred ecCCCeeeeeecCCCCCCCCEEE-EEeCCCcEEEEECCCCCc
Q 036605 200 MRHSPVAIDCKNSPNGEDGTVIL-AVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~l~-~~s~dg~i~vwd~~~~~~ 240 (340)
..|...+..+ .| ++++.+|+ +++.||.|++||+.+.+.
T Consensus 318 ~~~~~~v~~~--~~-s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 318 TLSTQPISSL--DW-SPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECCSSCEEEE--EE-CSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccCCCCeeEE--EE-cCCCCeEEEEecCCCcEEEEECCCccc
Confidence 2455556665 66 78888888 899999999999987543
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=8.5e-28 Score=214.63 Aligned_cols=207 Identities=11% Similarity=0.096 Sum_probs=162.1
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-----------eEEEecCCCC------------CC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-----------MKWKSTGRHP------------GG 75 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-----------~~~~~~~~h~------------~~ 75 (340)
.+...|+|++|+|+++ +||+|+.||.|++||+.+++ ....+.+ |. +.
T Consensus 26 ~~~~~V~~v~~s~~g~---------~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 26 AEADIISTVEFNHSGE---------LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEK 95 (447)
T ss_dssp CGGGSEEEEEECSSSS---------EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCC
T ss_pred cccCcEEEEEECCCCC---------EEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCc
Confidence 4578999999999999 99999999999999999876 4667787 98 88
Q ss_pred eEEEEEecCC--CEEEEEeCCCcEEEEeCCCCeEE---------------------------------------EE-eec
Q 036605 76 LAGLAFAKKG--RSLHVVGTNGMASEMKSEMGEVI---------------------------------------RE-FKA 113 (340)
Q Consensus 76 v~~v~~~~~~--~~l~s~~~dg~i~~wd~~~~~~~---------------------------------------~~-~~~ 113 (340)
|++++|+|++ ..|++++.|+.|++||+.++... .. ..+
T Consensus 96 V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp CCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred eEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 9999999998 79999999999999998765432 12 357
Q ss_pred CCCCeeEEEEccCCCEEEEec-CcEEEEECCCC-ceeE-------EeecCCCCeEEEEECCCC-CEEEEEEcCCCeEEEE
Q 036605 114 SEKPISSSAFLCEEKIFALAS-SEVRILSLENG-EEVL-------KFSDDVGPLQYVSASDGA-KIIITAGYGEKHLQVW 183 (340)
Q Consensus 114 ~~~~i~~l~~~~~~~~l~~~~-~~i~i~d~~~~-~~~~-------~~~~~~~~v~~~~~s~~~-~~l~s~~~~d~~i~iw 183 (340)
|...|.+++|+|++++|++++ +.|++||+.+. +.+. .+..|...|.+++|+|++ .+|++++. |+.|++|
T Consensus 176 h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~i~iw 254 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS-KGTIRLC 254 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET-TSCEEEE
T ss_pred CCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC-CCeEEEE
Confidence 889999999999999998863 33999999844 3333 256899999999999998 89999887 9999999
Q ss_pred EccCCCCCccCC-ceeeecCCC------------eeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC-CCccC
Q 036605 184 RCDISSKTVNKG-PALSMRHSP------------VAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT-VSQDE 242 (340)
Q Consensus 184 d~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~-~~~~~ 242 (340)
|++ .+..... ......+.. .+..+ .| +|++.+|++++. |.|++||+.. ++.+.
T Consensus 255 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~-s~~g~~l~~~~~-~~v~iwd~~~~~~~~~ 321 (447)
T 3dw8_B 255 DMR--ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDV--KF-SHSGRYMMTRDY-LSVKVWDLNMENRPVE 321 (447)
T ss_dssp ETT--TCSSSCTTCEEECCC-----CCHHHHHTTCEEEE--EE-CTTSSEEEEEES-SEEEEEETTCCSSCSC
T ss_pred ECc--CCccccceeeEeccCCCccccccccccCceEEEE--EE-CCCCCEEEEeeC-CeEEEEeCCCCccccc
Confidence 994 3332111 111112322 44444 55 889999999999 9999999987 55444
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=4.2e-28 Score=213.69 Aligned_cols=225 Identities=8% Similarity=0.042 Sum_probs=175.0
Q ss_pred CccCCCCceeeeeeCC---------CCCCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC
Q 036605 1 IWSTNDGSLLAEWKQP---------DGEPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~---------~~~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~ 70 (340)
|||+.+++....+... ..+|...|++++|+| ++. +|++|+.||.|++||+.+++....+.
T Consensus 70 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---------~l~s~~~d~~i~iwd~~~~~~~~~~~- 139 (408)
T 4a11_B 70 LYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG---------MFTSSSFDKTLKVWDTNTLQTADVFN- 139 (408)
T ss_dssp EEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT---------CEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred EEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc---------EEEEEeCCCeEEEeeCCCCccceecc-
Confidence 5888777655444311 014889999999999 567 89999999999999999998887776
Q ss_pred CCCCCeEEEEEecC---CCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEecC--cEEEEECCC
Q 036605 71 RHPGGLAGLAFAKK---GRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALASS--EVRILSLEN 144 (340)
Q Consensus 71 ~h~~~v~~v~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~--~i~i~d~~~ 144 (340)
+...+.++.|++. +..+++++.|+.|++||+.+++.+..+..|...|.+++|+|++. ++++++. .|++||+++
T Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 140 -FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp -CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred -CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 7788999999984 44999999999999999999999999999999999999999998 4666544 499999987
Q ss_pred Cc-eeEEe---------------ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCC-------------
Q 036605 145 GE-EVLKF---------------SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKG------------- 195 (340)
Q Consensus 145 ~~-~~~~~---------------~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~------------- 195 (340)
+. .+..+ ..|...|.+++|+|++.+|++++. |+.|++||++ .++....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~ 295 (408)
T 4a11_B 219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNSS--NGENTLVNYGKVCNNSKKGL 295 (408)
T ss_dssp SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEETT--TCCBCCCCCCCCCCCCSSCC
T ss_pred CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEECC--CCccceeccccccccccccc
Confidence 65 23333 568899999999999999999888 9999999995 2221110
Q ss_pred ------------------------------ceee-ecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 196 ------------------------------PALS-MRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 196 ------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.... ..|...+..+ .| ++++.+|++++.||.|++|++.+.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~--~~-s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 296 KFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC--VF-QSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp CCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE--EE-ETTTTEEEEEETTSCEEEEEECC-----
T ss_pred eeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE--EE-cCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 0000 1244444444 55 7999999999999999999999887665
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-28 Score=218.92 Aligned_cols=220 Identities=11% Similarity=0.134 Sum_probs=171.4
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccC---Ce---eEEEecCCCCC
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLT---GE---MKWKSTGRHPG 74 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~---~~---~~~~~~~~h~~ 74 (340)
|+ .+|+++..+. .+|...|++++|+| +++ +|++|+.||+|++||+.+ +. ....+ . |.+
T Consensus 48 w~-~~g~~~~~~~---~~h~~~V~~~~~s~~~~~---------~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~-h~~ 112 (437)
T 3gre_A 48 GN-LRGKLIATLM---ENEPNSITSSAVSPGETP---------YLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-D-CSS 112 (437)
T ss_dssp GG-CCCCEEEEEC---TTTTSCEEEEEEECSSSC---------EEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-E-CSS
T ss_pred cc-ccceEEeeec---cCCCCceEEEEECCCCCC---------EEEEecCCceEEEeECcccccCcccceeeec-c-CCC
Confidence 66 4577777773 28999999999999 999 999999999999999877 43 12222 3 899
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCC---CCeEEEEeec------------CCCCeeEEE--EccCCCEEEEecCc-
Q 036605 75 GLAGLAFAKKGRSLHVVGTNGMASEMKSE---MGEVIREFKA------------SEKPISSSA--FLCEEKIFALASSE- 136 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~dg~i~~wd~~---~~~~~~~~~~------------~~~~i~~l~--~~~~~~~l~~~~~~- 136 (340)
.|++++|+|++..|++++.||.|++||+. +++....+.. +...+.++. +++++.++++++.+
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 192 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS 192 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999999994 5544433221 345566666 55789899886654
Q ss_pred -EEEEECCCCceeEEeec--CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeec--
Q 036605 137 -VRILSLENGEEVLKFSD--DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKN-- 211 (340)
Q Consensus 137 -i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 211 (340)
|++||+++++.+..+.. |...|.+++|+|++.+|++++. |+.|++||++ .++.... +...+...+..+..
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~--~~~~~~~--~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT-RGIIDIWDIR--FNVLIRS--WSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET-TSCEEEEETT--TTEEEEE--EBCTTCEEEEEEEECT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC-CCeEEEEEcC--CccEEEE--EecCCCCceEEEEecc
Confidence 99999999999999987 8899999999999999999888 9999999994 3332221 12244444443311
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 212 SPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 212 ~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+ ++++.+|++++.||.|++||+.+++.+.
T Consensus 268 ~~-s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 268 FY-GKNSVIVVGGSSKTFLTIWNFVKGHCQY 297 (437)
T ss_dssp TT-CTTEEEEEEESTTEEEEEEETTTTEEEE
T ss_pred cc-CCCccEEEEEcCCCcEEEEEcCCCcEEE
Confidence 33 6889999999999999999998766444
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-28 Score=217.85 Aligned_cols=214 Identities=15% Similarity=0.113 Sum_probs=179.1
Q ss_pred CccCCCCceeeeeeCCCCCCCCC---------------eEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVS---------------YSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMK 65 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~---------------v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~ 65 (340)
+||+.+++....+. .+... +.+++|+|++. +++++.+|.|++||+.+++..
T Consensus 175 iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~i~~~d~~~~~~~ 240 (425)
T 1r5m_A 175 LWNVISGTVMQHFE----LKETGGSSINAENHSGDGSLGVDVEWVDDDK----------FVIPGPKGAIFVYQITEKTPT 240 (425)
T ss_dssp EEETTTTEEEEEEC----CC---------------CCCBSCCEEEETTE----------EEEECGGGCEEEEETTCSSCS
T ss_pred EEECCCCcEEEEee----ccccCccceeeccccCCcceeeEEEEcCCCE----------EEEEcCCCeEEEEEcCCCcee
Confidence 58999998888776 44444 99999999766 889999999999999999888
Q ss_pred EEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECC
Q 036605 66 WKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLE 143 (340)
Q Consensus 66 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~ 143 (340)
..+.. |...|.+++|+|++++|++++.|+.|++||+.+++.+..+..|...+.+++|+|++ ++++++. .|++||+.
T Consensus 241 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 241 GKLIG-HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLK 318 (425)
T ss_dssp EEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETT
T ss_pred eeecc-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECC
Confidence 88887 99999999999999999999999999999999999888898899999999999999 7766544 49999999
Q ss_pred CCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc-----------------cCCceeeecCCC--
Q 036605 144 NGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV-----------------NKGPALSMRHSP-- 204 (340)
Q Consensus 144 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~-----------------~~~~~~~~~~~~-- 204 (340)
+++.+..+..|...+.+++|+|++.+|++++. |+.|++||++ .... .........+..
T Consensus 319 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (425)
T 1r5m_A 319 QNTLLALSIVDGVPIFAGRISQDGQKYAVAFM-DGQVNVYDLK--KLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDND 395 (425)
T ss_dssp TTEEEEEEECTTCCEEEEEECTTSSEEEEEET-TSCEEEEECH--HHHC--------------CEECCEEEEECCTTCCC
T ss_pred CCcEeEecccCCccEEEEEEcCCCCEEEEEEC-CCeEEEEECC--CCccceeeeecccccccCcccchhhhhhcCcccCC
Confidence 99999999999999999999999999999887 9999999994 2220 001111113432
Q ss_pred eeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 205 VAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
.+..+ .| ++++.+|++++.||.|++|++.
T Consensus 396 ~v~~~--~~-s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 396 YIFDL--SW-NCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEE--EE-CTTSSEEEEEESSSCCEEEECC
T ss_pred ceEEE--Ec-cCCCceEEEEecCceEEEEeec
Confidence 55555 56 8999999999999999999985
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3e-28 Score=231.13 Aligned_cols=221 Identities=14% Similarity=0.138 Sum_probs=178.0
Q ss_pred CccCC--CCceeeeeeCCCCCCCCCeEEEEeecc--ccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCC
Q 036605 1 IWSTN--DGSLLAEWKQPDGEPVVSYSCLACGFV--GKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPG 74 (340)
Q Consensus 1 vwd~~--~g~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~ 74 (340)
|||+. ++.....+. +|...|++++|+|+ +. +|++|+.||.|++||+.+++ ....+.. |..
T Consensus 35 vwd~~~~~~~~~~~l~----~h~~~V~~l~~s~~~~~~---------~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~ 100 (753)
T 3jro_A 35 IFEVEGETHKLIDTLT----GHEGPVWRVDWAHPKFGT---------ILASCSYDGKVLIWKEENGRWSQIAVHAV-HSA 100 (753)
T ss_dssp EEEEETTEEEEEEEEC----CCSSCEEEEEECCTTSCS---------EEEEEETTSCEEEEEEETTEEEEEEEECC-CSS
T ss_pred EEecCCCCCccceecc----CCcCceEEEEecCCCCCC---------EEEEEeCCCeEEEEECCCCcccccccccC-CCC
Confidence 58877 445556666 79999999999988 78 89999999999999999987 5666776 999
Q ss_pred CeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCe--EEEEeecCCCCeeEEEEcc-------------CCCEEEEecCc-
Q 036605 75 GLAGLAFAKK--GRSLHVVGTNGMASEMKSEMGE--VIREFKASEKPISSSAFLC-------------EEKIFALASSE- 136 (340)
Q Consensus 75 ~v~~v~~~~~--~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~-------------~~~~l~~~~~~- 136 (340)
.|++++|+|+ +..+++++.||.|++||+.++. ....+..|...|.+++|+| ++.++++++.+
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg 180 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC
Confidence 9999999999 9999999999999999998873 3445678899999999999 58888886544
Q ss_pred -EEEEECCCC----ceeEEeecCCCCeEEEEECCC---CCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 137 -VRILSLENG----EEVLKFSDDVGPLQYVSASDG---AKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 137 -i~i~d~~~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
|++||++++ .....+.+|...|.+++|+|+ +.++++++. |+.|++||++...............+...+..
T Consensus 181 ~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 259 (753)
T 3jro_A 181 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR 259 (753)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES-SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCC
T ss_pred eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec-CCEEEEecCCCCCCcceeEEeccCCCCCceEE
Confidence 999999877 445677889999999999999 889999887 99999999953222111111111134444444
Q ss_pred eecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 209 CKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
+ .| +|++.++++++.||.|++|++....
T Consensus 260 l--~~-spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 260 A--SW-SLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp E--EE-CTTTCCEEEECSSSCEECCBCCSSS
T ss_pred E--EE-cCCCCEEEEEcCCCEEEEEecCCCC
Confidence 4 55 8999999999999999999998643
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=6.3e-28 Score=214.72 Aligned_cols=214 Identities=15% Similarity=0.124 Sum_probs=169.3
Q ss_pred CceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCee-------EEEecCCCCCCeEEE
Q 036605 7 GSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEM-------KWKSTGRHPGGLAGL 79 (340)
Q Consensus 7 g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~-------~~~~~~~h~~~v~~v 79 (340)
+.....+. +|...|++++|+|++. .+|++|+.||.|++||+..+.. ...+.. |...|.++
T Consensus 171 ~~~~~~~~----~h~~~v~~l~~~~~~~--------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v 237 (430)
T 2xyi_A 171 CQPDLRLR----GHQKEGYGLSWNPNLN--------GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDV 237 (430)
T ss_dssp CCCSEEEE----CCSSCCCCEEECTTST--------TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEE
T ss_pred CCCcEEec----CCCCCeEEEEeCCCCC--------CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeee
Confidence 45556666 7899999999999873 1899999999999999987421 345556 99999999
Q ss_pred EEec-CCCEEEEEeCCCcEEEEeCCCC---eEEEEeecCCCCeeEEEEccCCC-EEEEec--CcEEEEECCC-CceeEEe
Q 036605 80 AFAK-KGRSLHVVGTNGMASEMKSEMG---EVIREFKASEKPISSSAFLCEEK-IFALAS--SEVRILSLEN-GEEVLKF 151 (340)
Q Consensus 80 ~~~~-~~~~l~s~~~dg~i~~wd~~~~---~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~--~~i~i~d~~~-~~~~~~~ 151 (340)
+|+| ++..|++++.||.|++||++++ ..+..+..|...|.+++|+|++. ++++++ +.|++||+++ +..+..+
T Consensus 238 ~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 238 AWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 9999 6789999999999999999987 56677888999999999999987 566654 4499999998 5567888
Q ss_pred ecCCCCeEEEEECCCCCE-EEEEEcCCCeEEEEEccCCCCCcc--------CCcee-eecCCCeeeeeecCCCCCCCC-E
Q 036605 152 SDDVGPLQYVSASDGAKI-IITAGYGEKHLQVWRCDISSKTVN--------KGPAL-SMRHSPVAIDCKNSPNGEDGT-V 220 (340)
Q Consensus 152 ~~~~~~v~~~~~s~~~~~-l~s~~~~d~~i~iwd~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 220 (340)
..|...|.+++|+|++.+ |++++. |+.|+|||++....... ..... ...|...+..+ .| +|++. +
T Consensus 318 ~~h~~~v~~i~~sp~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~-~p~~~~~ 393 (430)
T 2xyi_A 318 ESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF--SW-NPNEPWI 393 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEET-TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEE--EE-CSSSTTE
T ss_pred ecCCCCEEEEEECCCCCCEEEEEeC-CCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEE--EE-CCCCCCE
Confidence 999999999999999965 666565 99999999953221110 01111 12455556666 66 78887 8
Q ss_pred EEEEeCCCcEEEEECCC
Q 036605 221 ILAVAESGVAYSWDLKT 237 (340)
Q Consensus 221 l~~~s~dg~i~vwd~~~ 237 (340)
+++++.||.|++|++..
T Consensus 394 l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEETTSEEEEEEECH
T ss_pred EEEEECCCCEEEeEccc
Confidence 99999999999999876
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.9e-29 Score=223.74 Aligned_cols=155 Identities=8% Similarity=0.057 Sum_probs=135.1
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-eEEEecCCCCCCeEEE--EEecCC-CEEEEEeCC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-MKWKSTGRHPGGLAGL--AFAKKG-RSLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~~v--~~~~~~-~~l~s~~~d 94 (340)
+|...|+|++|+|+ . +|++|+.||+|++||+.++. ....+.+ |.+.|++| +|+|++ .+|++++.|
T Consensus 264 ~h~~~v~sv~~s~~-~---------~lasgs~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 264 LADSLITTFDFLSP-T---------TVVCGFKNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp CTTTCEEEEEESSS-S---------EEEEEETTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred cCCCCEEEEEecCC-C---------eEEEEeCCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccC
Confidence 68899999999985 4 59999999999999998764 3445677 99999999 578887 899999999
Q ss_pred CcEEEEeCCCCeEEEEeecCCC--CeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecCCCCeEEEEECCCCCEE
Q 036605 95 GMASEMKSEMGEVIREFKASEK--PISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDDVGPLQYVSASDGAKII 170 (340)
Q Consensus 95 g~i~~wd~~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 170 (340)
++|++||+++++....+.+|.. .+.+++|+|++..+++++.+ |++||++++..+..+.+|...|.+++|+|++++|
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV 412 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeE
Confidence 9999999998876666655543 47899999999998886555 9999999998888899999999999999999999
Q ss_pred EEEEcCCCeEEEEEc
Q 036605 171 ITAGYGEKHLQVWRC 185 (340)
Q Consensus 171 ~s~~~~d~~i~iwd~ 185 (340)
++++. |++|++||+
T Consensus 413 ~Sgs~-Dgtv~lwd~ 426 (524)
T 2j04_B 413 LAGSA-DGSLIITNA 426 (524)
T ss_dssp EEEET-TTEEECCBS
T ss_pred EEEEC-CCEEEEEec
Confidence 99888 999999997
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.9e-28 Score=216.72 Aligned_cols=200 Identities=8% Similarity=0.021 Sum_probs=163.0
Q ss_pred CCCCeEEEEeeccccccccccCceEE-EEEcCCCcEEEEEcc--CCeeEEEecC-CCCCCeEEEEEecCCCEEEEEeCCC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLL-ALGTSNGDILAVDVL--TGEMKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNG 95 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l-~~g~~dg~i~i~d~~--~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg 95 (340)
|...|++++|+|+++ +| ++|+.||.|++||+. +++.+..+.. .|...|.+++|+|++++|++++.+|
T Consensus 101 ~~~~v~~~~~s~d~~---------~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 171 (450)
T 2vdu_B 101 IYSYIRNLRLTSDES---------RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG 171 (450)
T ss_dssp CCCCEEEEEECTTSS---------EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCceEEEEEcCCCC---------EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC
Confidence 444799999999998 75 899999999999999 8877777752 2778999999999999999999999
Q ss_pred cEEEEeCCCCeEEE----EeecCCCCeeEEEEccC---CCEEEEecCc--EEEEECCCCceeEE-eecCCCCeEEEEECC
Q 036605 96 MASEMKSEMGEVIR----EFKASEKPISSSAFLCE---EKIFALASSE--VRILSLENGEEVLK-FSDDVGPLQYVSASD 165 (340)
Q Consensus 96 ~i~~wd~~~~~~~~----~~~~~~~~i~~l~~~~~---~~~l~~~~~~--i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~ 165 (340)
.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.+ |++||+.+++.+.. +.+|...|.+++|+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-
T ss_pred cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-
Confidence 99999998877544 67789999999999999 9899886655 99999999988877 46899999999999
Q ss_pred CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeee----------------------cCCCeeeeeecCCCCCCCCEEEE
Q 036605 166 GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSM----------------------RHSPVAIDCKNSPNGEDGTVILA 223 (340)
Q Consensus 166 ~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~l~~ 223 (340)
++.+|++++. |+.|++||++ +++....+.... .....+..+ .+ .+++.+|++
T Consensus 251 d~~~l~s~~~-d~~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~-~~~~~~l~~ 324 (450)
T 2vdu_B 251 KDYLLLSAGG-DDKIFAWDWK--TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI--IK-SKNLPFVAF 324 (450)
T ss_dssp STTEEEEEES-SSEEEEEETT--TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE--EE-CSSSSEEEE
T ss_pred CCCEEEEEeC-CCeEEEEECC--CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE--EE-eCCCCEEEE
Confidence 9999999887 9999999994 443322221000 011122233 44 688999999
Q ss_pred Ee-CCCcEEEEEC
Q 036605 224 VA-ESGVAYSWDL 235 (340)
Q Consensus 224 ~s-~dg~i~vwd~ 235 (340)
++ .|+.|++|++
T Consensus 325 ~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 325 FVEATKCIIILEM 337 (450)
T ss_dssp EETTCSEEEEEEE
T ss_pred EECCCCeEEEEEe
Confidence 98 8999999999
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2.2e-27 Score=237.25 Aligned_cols=157 Identities=11% Similarity=0.186 Sum_probs=147.9
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
+|...|+|++|+|+++ +|++|+.||+|++||+.+++.+..+.+ |.+.|.+++|+|++++|++++.|+.|+
T Consensus 613 ~h~~~v~~~~~s~~~~---------~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQ---------RIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCSADKKVK 682 (1249)
T ss_dssp CCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cccccEEEEEECCCCC---------EEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEeCCCeEE
Confidence 7899999999999999 999999999999999999999999998 999999999999999999999999999
Q ss_pred EEeCCCCeEEEEeecCCCCeeEEEEcc--CCCEEEEecCc--EEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEE
Q 036605 99 EMKSEMGEVIREFKASEKPISSSAFLC--EEKIFALASSE--VRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 99 ~wd~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
+||+.+++.+..+..|...|.+++|+| ++.++++++.+ |++||+.+++.+..+.+|...|.+++|+|++.++++++
T Consensus 683 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred EEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE
Confidence 999999999999999999999999999 45577776544 99999999999999999999999999999999999988
Q ss_pred cCCCeEEEEEcc
Q 036605 175 YGEKHLQVWRCD 186 (340)
Q Consensus 175 ~~d~~i~iwd~~ 186 (340)
. |+.|++||++
T Consensus 763 ~-dg~v~vwd~~ 773 (1249)
T 3sfz_A 763 A-DGTLRLWDVR 773 (1249)
T ss_dssp S-SSEEEEEEGG
T ss_pred C-CCeEEEEeCC
Confidence 8 9999999984
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=4.2e-27 Score=202.36 Aligned_cols=219 Identities=15% Similarity=0.161 Sum_probs=174.6
Q ss_pred CccCCCCc-----eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCC
Q 036605 1 IWSTNDGS-----LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~g~-----~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~ 75 (340)
|||+.+++ ....+. +|...|++++|+|+++ +|++|+.||.|++|+...+........ +...
T Consensus 65 vWd~~~~~~~~~~~~~~l~----~h~~~V~~~~~s~dg~---------~l~s~~~d~~i~~~~~~~~~~~~~~~~-~~~~ 130 (340)
T 4aow_A 65 MWKLTRDETNYGIPQRALR----GHSHFVSDVVISSDGQ---------FALSGSWDGTLRLWDLTTGTTTRRFVG-HTKD 130 (340)
T ss_dssp EEEECCSSSCSEEEEEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTTEEEEEEEC-CSSC
T ss_pred EEECCCCCcccceeeEEEe----CCCCCEEEEEECCCCC---------EEEEEcccccceEEeecccceeeeecC-CCCc
Confidence 58876554 234555 7999999999999999 999999999999999999987777776 8889
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEE-EeecCCCCeeEEEEccCC--CEEEEecC--cEEEEECCCCceeEE
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIR-EFKASEKPISSSAFLCEE--KIFALASS--EVRILSLENGEEVLK 150 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~i~~l~~~~~~--~~l~~~~~--~i~i~d~~~~~~~~~ 150 (340)
+..+.+++++..|++++.|+.+++||+....... ....|...+..++|++++ .++++++. .|++||+.+++.+..
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 9999999999999999999999999998765443 356788899999999875 45566544 499999999999999
Q ss_pred eecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCc----------------ee----------------
Q 036605 151 FSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGP----------------AL---------------- 198 (340)
Q Consensus 151 ~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~----------------~~---------------- 198 (340)
+.+|...|.+++|+|++++|++++. |+.|++||++ ..+....+ .+
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~-Dg~i~iwd~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGK-DGQAMLWDLN--EGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEET-TCEEEEEETT--TTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeC-CCeEEEEEec--cCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCC
Confidence 9999999999999999999999888 9999999984 22111000 00
Q ss_pred --------------eecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 199 --------------SMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 199 --------------~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
...|...+..+ .| +|++.+|++|+.||.|+|||+.++.
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~l--~~-s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 288 IIVDELKQEVISTSSKAEPPQCTSL--AW-SADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECCC-------CCCCCEEEE--EE-CTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eEEEeccccceeeeccCCCCCEEEE--EE-CCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 00122333333 45 8999999999999999999998875
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=2.8e-28 Score=217.37 Aligned_cols=223 Identities=12% Similarity=0.026 Sum_probs=164.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC-CCCCCeEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG-RHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~ 78 (340)
|||+.+++....+... +|...|++|+|+| ++. +|++|+.||+|++||++++........ .+...+.+
T Consensus 146 lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~~---------~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 214 (435)
T 4e54_B 146 LWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNTN---------QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCS 214 (435)
T ss_dssp EECSSCCSCCEEECCC--SSSCCCCEEEECSSCTT---------EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCC
T ss_pred EEECCCCCceeEEEcc--CCCCCEEEEEEeCCCCC---------EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEE
Confidence 6998887655444433 7999999999998 467 899999999999999987754333322 24456789
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEec--CcEEEEECCCCceeEE---ee
Q 036605 79 LAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALAS--SEVRILSLENGEEVLK---FS 152 (340)
Q Consensus 79 v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~--~~i~i~d~~~~~~~~~---~~ 152 (340)
++|+|++.+|++|+.||.|++||++. +.+..+.+|...|.+++|+|++. ++++++ +.|++||+++.+.... ..
T Consensus 215 ~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~ 293 (435)
T 4e54_B 215 LDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL 293 (435)
T ss_dssp EEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC
T ss_pred EEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee
Confidence 99999999999999999999999864 55677889999999999999986 566654 4499999988765433 36
Q ss_pred cCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCC----CeeeeeecCCCCCCCCEEEEEe---
Q 036605 153 DDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHS----PVAIDCKNSPNGEDGTVILAVA--- 225 (340)
Q Consensus 153 ~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~s--- 225 (340)
+|...|.+++|+|++.+|++++. |+.|+|||++ .+....... .|. .....+.+.+ ++++..+++++
T Consensus 294 ~h~~~v~~~~~spdg~~l~s~~~-D~~i~iwd~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d 366 (435)
T 4e54_B 294 PHRHPVNAACFSPDGARLLTTDQ-KSEIRVYSAS--QWDCPLGLI---PHPHRHFQHLTPIKAAW-HPRYNLIVVGRYPD 366 (435)
T ss_dssp BCSSCEEECCBCTTSSEEEEEES-SSCEEEEESS--SSSSEEEEC---CCCCCCCSSSCCCBCEE-CSSSSCEEEECCCC
T ss_pred eccccccceeECCCCCeeEEEcC-CCEEEEEECC--CCccceEEe---cccccccccceeEEEEE-cCCCCEEEEEEcCC
Confidence 78999999999999999999888 9999999984 332211111 111 1111111123 44555555443
Q ss_pred ---------CCCcEEEEECCCCCccC
Q 036605 226 ---------ESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 226 ---------~dg~i~vwd~~~~~~~~ 242 (340)
.++.|++||..+++.+.
T Consensus 367 ~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 367 PNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp TTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred CCeEEEEecCCCEEEEEECCCCcEEE
Confidence 34579999998876654
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=5.7e-27 Score=203.47 Aligned_cols=206 Identities=12% Similarity=0.139 Sum_probs=158.2
Q ss_pred CCCCCeEEEEeecc---ccccccccCceEEEEEcCCCcEEEEEccC-CeeE-EEecCCCCCCeEEEEEecCCCEEEEEeC
Q 036605 19 EPVVSYSCLACGFV---GKKRRKERGTLLLALGTSNGDILAVDVLT-GEMK-WKSTGRHPGGLAGLAFAKKGRSLHVVGT 93 (340)
Q Consensus 19 ~~~~~v~~l~~sp~---~~~~~~~~~~~~l~~g~~dg~i~i~d~~~-~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 93 (340)
+|...|+|++|+|+ ++ +|++|+.||.|++||+.+ +... ..+.+ |.+.|++++|+|++++|++++.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~---------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGN---------FLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp CCSSCEEEEEECCTTSSSE---------EEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCceEEEEEcCCCCCce---------EEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcC
Confidence 89999999999999 58 899999999999999997 5444 56666 9999999999999999999999
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCCeeEEEE--ccCCCEEEEecC--cEEEEECCCCceeEEeecCC--------------
Q 036605 94 NGMASEMKSEMGEVIREFKASEKPISSSAF--LCEEKIFALASS--EVRILSLENGEEVLKFSDDV-------------- 155 (340)
Q Consensus 94 dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~--~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~-------------- 155 (340)
||.|++||+.+++.+. +..|...|.+++| +|++.++++++. .|++||+++++.+..+..+.
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 9999999999998765 5668999999999 899998888654 49999999887776665432
Q ss_pred ---------------------------CCeEEEEECCCCCE----EEEEEcCCCeEEEEEccCCCC-CccCCceeeecCC
Q 036605 156 ---------------------------GPLQYVSASDGAKI----IITAGYGEKHLQVWRCDISSK-TVNKGPALSMRHS 203 (340)
Q Consensus 156 ---------------------------~~v~~~~~s~~~~~----l~s~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~ 203 (340)
..+..+.+.++... +++++. |+.|++|+++.... .....+. .|.
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~i~i~~~~~~~~~~~~~~~~---~~~ 261 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI-EGRVAIHYINPPNPAKDNFTFK---CHR 261 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET-TSEEEEEESSCSCHHHHSEEEE---CSE
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC-CCcEEEEecCCCCccccceeee---eee
Confidence 22334444333332 777666 99999999842211 1111111 222
Q ss_pred C------------eeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 204 P------------VAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 204 ~------------~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
. .+..+ .| +|++.+|++++.||.|++||+.+++.+.
T Consensus 262 ~~~~~~~~~~~~~~v~~~--~~-sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 262 SNGTNTSAPQDIYAVNGI--AF-HPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EC----CCCEEECCEEEE--EE-CTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred cccccccccccccceEEE--EE-ecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 1 23344 55 8899999999999999999998866554
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.9e-27 Score=199.48 Aligned_cols=211 Identities=16% Similarity=0.226 Sum_probs=175.5
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC---eeEEEecCCCCCCeE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG---EMKWKSTGRHPGGLA 77 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~---~~~~~~~~~h~~~v~ 77 (340)
|||+.+++....+. .|...|.+++|+|+++ +|++|+.||.|++|++... +....+.. |...|.
T Consensus 43 vw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~---------~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~ 108 (313)
T 3odt_A 43 LWSKDDQWLGTVVY----TGQGFLNSVCYDSEKE---------LLLFGGKDTMINGVPLFATSGEDPLYTLIG-HQGNVC 108 (313)
T ss_dssp EEEESSSEEEEEEE----ECSSCEEEEEEETTTT---------EEEEEETTSCEEEEETTCCTTSCC-CEECC-CSSCEE
T ss_pred EEECCCCEEEEEee----cCCccEEEEEECCCCC---------EEEEecCCCeEEEEEeeecCCCCcccchhh-cccCEE
Confidence 69998888888777 7899999999999999 9999999999999998765 45666777 999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEcc-CCCEEEEecCc--EEEEECCCCceeEEeec-
Q 036605 78 GLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLC-EEKIFALASSE--VRILSLENGEEVLKFSD- 153 (340)
Q Consensus 78 ~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~~--i~i~d~~~~~~~~~~~~- 153 (340)
+++| +++.|++++.||.|++|| .++....+..|...+.+++++| ++.++++++.+ |++|| .++....+..
T Consensus 109 ~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~ 182 (313)
T 3odt_A 109 SLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGI 182 (313)
T ss_dssp EEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSS
T ss_pred EEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEecc
Confidence 9999 478999999999999999 6778888999999999999998 88888886544 99999 4556667766
Q ss_pred CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEE
Q 036605 154 DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSW 233 (340)
Q Consensus 154 ~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vw 233 (340)
|...+.+++|+|++. +++++. |+.|++||+ ..++....+. .|...+..+ .+ ++++ .+++++.||.|++|
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~-dg~i~i~d~--~~~~~~~~~~---~~~~~i~~~--~~-~~~~-~l~~~~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSN-DGLIKLVDM--HTGDVLRTYE---GHESFVYCI--KL-LPNG-DIVSCGEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEET-TSEEEEEET--TTCCEEEEEE---CCSSCEEEE--EE-CTTS-CEEEEETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccC-CCeEEEEEC--Cchhhhhhhh---cCCceEEEE--EE-ecCC-CEEEEecCCEEEEE
Confidence 889999999999997 778777 999999999 3444333333 566666665 55 7787 58999999999999
Q ss_pred ECCCCCccC
Q 036605 234 DLKTVSQDE 242 (340)
Q Consensus 234 d~~~~~~~~ 242 (340)
|+.+++...
T Consensus 252 d~~~~~~~~ 260 (313)
T 3odt_A 252 SKENGSLKQ 260 (313)
T ss_dssp CTTTCCEEE
T ss_pred ECCCCceeE
Confidence 998876554
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=1.5e-27 Score=221.32 Aligned_cols=219 Identities=15% Similarity=0.125 Sum_probs=184.2
Q ss_pred CccCCCC----ceeeeeeCCCCCCCCC-eEEEEeec--cccccccccCceEEEEEcCCCcEEEEEccCC--------eeE
Q 036605 1 IWSTNDG----SLLAEWKQPDGEPVVS-YSCLACGF--VGKKRRKERGTLLLALGTSNGDILAVDVLTG--------EMK 65 (340)
Q Consensus 1 vwd~~~g----~~~~~~~~~~~~~~~~-v~~l~~sp--~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--------~~~ 65 (340)
|||+.++ +....+. +|... |++++|+| +++ +|++|+.||.|++||+.++ +..
T Consensus 43 v~~~~~~~~~~~~~~~~~----~h~~~~v~~~~~sp~~~~~---------~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 109 (615)
T 1pgu_A 43 VRCLDDGDSKVPPVVQFT----GHGSSVVTTVKFSPIKGSQ---------YLCSGDESGKVIVWGWTFDKESNSVEVNVK 109 (615)
T ss_dssp EEECCSSCCSSCSEEEEC----TTTTSCEEEEEECSSTTCC---------EEEEEETTSEEEEEEEEEEGGGTEEEEEEE
T ss_pred EEECCCCCCccccceEEe----cCCCceEEEEEECcCCCCC---------EEEEecCCCEEEEEeCCCCccccccccccc
Confidence 6899888 7888887 78889 99999999 999 9999999999999999755 566
Q ss_pred EEecCCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-EEEEecCc--EE
Q 036605 66 WKSTGRHPGGLAGLAFAKKGRSLHVVGTN----GMASEMKSEMGEVIREFKASEKPISSSAFLCEEK-IFALASSE--VR 138 (340)
Q Consensus 66 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~~--i~ 138 (340)
..+.. |...|.+++|+|++++|++++.+ +.|.+|| .++.+..+..|...|.+++|+|++. .+++++.+ |+
T Consensus 110 ~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 186 (615)
T 1pgu_A 110 SEFQV-LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 186 (615)
T ss_dssp EEEEC-CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEE
T ss_pred chhhc-ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEE
Confidence 77777 99999999999999999999988 6888888 6778888999999999999999998 67775544 99
Q ss_pred EEECCCCceeEEeecCCC---CeEEEEECCC-CCEEEEEEcCCCeEEEEEccCCCCCccCCce-eeecCCCeeeeeecCC
Q 036605 139 ILSLENGEEVLKFSDDVG---PLQYVSASDG-AKIIITAGYGEKHLQVWRCDISSKTVNKGPA-LSMRHSPVAIDCKNSP 213 (340)
Q Consensus 139 i~d~~~~~~~~~~~~~~~---~v~~~~~s~~-~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 213 (340)
+||+.+++.+..+..|.. .|.+++|+|+ +.+|++++. |+.|++||+ ..++....+. ....|...+..+ .|
T Consensus 187 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~vwd~--~~~~~~~~~~~~~~~~~~~v~~~--~~ 261 (615)
T 1pgu_A 187 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-DRKISCFDG--KSGEFLKYIEDDQEPVQGGIFAL--SW 261 (615)
T ss_dssp EEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-TCCEEEEET--TTCCEEEECCBTTBCCCSCEEEE--EE
T ss_pred EEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-CCeEEEEEC--CCCCEeEEecccccccCCceEEE--EE
Confidence 999999999999999998 9999999999 999999888 999999998 3443322220 000455556666 56
Q ss_pred CCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 214 NGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 214 ~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+ ++.+|++++.||.|++||+.+++...
T Consensus 262 -~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 262 -L-DSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp -S-SSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred -c-CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 5 89999999999999999998765443
No 91
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=226.08 Aligned_cols=205 Identities=17% Similarity=0.195 Sum_probs=171.3
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc--CCeeEEEecCCCCCCeEEEEEecC--CCEEEEEeCC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL--TGEMKWKSTGRHPGGLAGLAFAKK--GRSLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~--~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d 94 (340)
+|...|+|++|+|+++ +|++|+.||.|++||+. +++....+.+ |.+.|++++|+|+ ++.|++|+.|
T Consensus 7 gH~~~V~~l~~s~dg~---------~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~D 76 (753)
T 3jro_A 7 AHNELIHDAVLDYYGK---------RLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD 76 (753)
T ss_dssp -CCCCEEEECCCSSSC---------CEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETT
T ss_pred cCcceeEEEEECCCCC---------eEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCC
Confidence 8999999999999998 89999999999999998 4456777887 9999999999988 9999999999
Q ss_pred CcEEEEeCCCCe--EEEEeecCCCCeeEEEEccC--CCEEEEecCc--EEEEECCCCc--eeEEeecCCCCeEEEEECC-
Q 036605 95 GMASEMKSEMGE--VIREFKASEKPISSSAFLCE--EKIFALASSE--VRILSLENGE--EVLKFSDDVGPLQYVSASD- 165 (340)
Q Consensus 95 g~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~~--i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~- 165 (340)
|.|++||+.+++ .+..+..|...|.+++|+|+ +..+++++.+ |++||+.++. ....+.+|...|.++.|+|
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 999999999987 66677889999999999999 9999886654 9999998873 3456688999999999999
Q ss_pred ------------CCCEEEEEEcCCCeEEEEEccCCCCCccCCc-eeeecCCCeeeeeecCCCCCC---CCEEEEEeCCCc
Q 036605 166 ------------GAKIIITAGYGEKHLQVWRCDISSKTVNKGP-ALSMRHSPVAIDCKNSPNGED---GTVILAVAESGV 229 (340)
Q Consensus 166 ------------~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~l~~~s~dg~ 229 (340)
++.++++++. ||.|++||++. +...... .....|...+..+ .| +|+ +.++++++.||.
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~--~~~~~~~~~~~~~h~~~V~~l--~~-sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNS--DAQTYVLESTLEGHSDWVRDV--AW-SPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp C---------CGGGCCEEEEET-TSCEEEEEEET--TTTEEEEEEEECCCSSCEEEE--EE-CCCCSSSEEEEEEESSSC
T ss_pred ccccccccccCCCCCEEEEEEC-CCeEEEEeccC--CcccceeeeeecCCCCcEEEE--Ee-ccCCCCCCEEEEEecCCE
Confidence 5889999888 99999999953 2211111 1112466666666 66 778 899999999999
Q ss_pred EEEEECCCCC
Q 036605 230 AYSWDLKTVS 239 (340)
Q Consensus 230 i~vwd~~~~~ 239 (340)
|++||+.++.
T Consensus 231 I~iwd~~~~~ 240 (753)
T 3jro_A 231 CIIWTQDNEQ 240 (753)
T ss_dssp EEEEEESSSS
T ss_pred EEEecCCCCC
Confidence 9999998864
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.2e-26 Score=206.83 Aligned_cols=206 Identities=17% Similarity=0.216 Sum_probs=176.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++....+. +|...|+|++| +++ +|++|+.||.|++||+.+++....+.+ |.+.|.+++
T Consensus 157 iwd~~~~~~~~~~~----~h~~~v~~l~~--~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~ 220 (435)
T 1p22_A 157 IWDKNTLECKRILT----GHTGSVLCLQY--DER---------VIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLR 220 (435)
T ss_dssp EEESSSCCEEEEEC----CCSSCEEEEEC--CSS---------EEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEE
T ss_pred EEeCCCCeEEEEEc----CCCCcEEEEEE--CCC---------EEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEE
Confidence 69999999998887 89999999999 677 899999999999999999999999988 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEE---EEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecCC
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVI---REFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDDV 155 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~---~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~ 155 (340)
|+ +..|++|+.||.|++||+.++... ..+.+|...|.++++ ++.++++++. .|++||+++++.+..+.+|.
T Consensus 221 ~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 296 (435)
T 1p22_A 221 FN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK 296 (435)
T ss_dssp CC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred Ec--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC
Confidence 97 469999999999999999987654 567788999999998 6778887654 49999999999999999999
Q ss_pred CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 156 GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 156 ~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
..|.++.| ++.++++++. |+.|++||+ .+++....+. .|...+..+ ..++.+|++|+.||.|++||+
T Consensus 297 ~~v~~~~~--~~~~l~~g~~-dg~i~iwd~--~~~~~~~~~~---~h~~~v~~~-----~~~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 297 RGIACLQY--RDRLVVSGSS-DNTIRLWDI--ECGACLRVLE---GHEELVRCI-----RFDNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp SCEEEEEE--ETTEEEEEET-TSCEEEEET--TTCCEEEEEC---CCSSCEEEE-----ECCSSEEEEEETTSCEEEEEH
T ss_pred CcEEEEEe--CCCEEEEEeC-CCeEEEEEC--CCCCEEEEEe---CCcCcEEEE-----EecCCEEEEEeCCCcEEEEEC
Confidence 99999999 4678999887 999999999 4444433333 566666666 337889999999999999999
Q ss_pred CCCC
Q 036605 236 KTVS 239 (340)
Q Consensus 236 ~~~~ 239 (340)
.+..
T Consensus 364 ~~~~ 367 (435)
T 1p22_A 364 VAAL 367 (435)
T ss_dssp HHHT
T ss_pred CCCC
Confidence 8755
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=1.3e-27 Score=210.91 Aligned_cols=217 Identities=15% Similarity=0.172 Sum_probs=174.8
Q ss_pred CccCCCC-------ceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEe--cC
Q 036605 1 IWSTNDG-------SLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKS--TG 70 (340)
Q Consensus 1 vwd~~~g-------~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~--~~ 70 (340)
|||+.++ +.+..+. +|...|++++|+|++ . +|++|+.||.|++||+.+++....+ ..
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~p~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 174 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLE----GHTKRVGIVAWHPTAQN---------VLLSAGCDNVILVWDVGTGAAVLTLGPDV 174 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEE----CCSSCEEEEEECSSBTT---------EEEEEETTSCEEEEETTTTEEEEEECTTT
T ss_pred EEEccCCCCccccCCceEEec----CCCCeEEEEEECcCCCC---------EEEEEcCCCEEEEEECCCCCccEEEecCC
Confidence 6888887 4556666 799999999999998 7 8999999999999999999998888 56
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEe-ecCCCC-eeEEEEccCCCEEEEe-----cCcEEEEECC
Q 036605 71 RHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREF-KASEKP-ISSSAFLCEEKIFALA-----SSEVRILSLE 143 (340)
Q Consensus 71 ~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~-i~~l~~~~~~~~l~~~-----~~~i~i~d~~ 143 (340)
|.+.|.+++|+|+++.|++++.||.|++||+++++.+..+ ..|... +.+++|+|++.+++++ ++.|++||+.
T Consensus 175 -~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 175 -HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp -CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred -CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 9999999999999999999999999999999999998888 677765 8999999999999887 3349999998
Q ss_pred CCce-eEEe-ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc-cCCceeeecCCCeeeeeecCCCCCCCCE
Q 036605 144 NGEE-VLKF-SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV-NKGPALSMRHSPVAIDCKNSPNGEDGTV 220 (340)
Q Consensus 144 ~~~~-~~~~-~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (340)
+++. +... ..|...+..++|+|++.+|++++..|+.|++||++ .++. ...+. ...+...+..+ .| +|++.+
T Consensus 254 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~--~~~~~~~~l~-~~~~~~~v~~~--~~-sp~~~~ 327 (402)
T 2aq5_A 254 HLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT--SEAPFLHYLS-MFSSKESQRGM--GY-MPKRGL 327 (402)
T ss_dssp BCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC--SSTTCEEEEE-EECCSSCCSEE--EE-CCGGGS
T ss_pred cccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec--CCCcceEeec-ccccCCcccce--EE-eccccc
Confidence 8764 3333 35678899999999999998777669999999994 4332 11111 12233444444 55 788887
Q ss_pred EEEEeCCCcEEEEECCCCC
Q 036605 221 ILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 221 l~~~s~dg~i~vwd~~~~~ 239 (340)
++ +.++.+++|++.+..
T Consensus 328 ~~--s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 328 EV--NKCEIARFYKLHERK 344 (402)
T ss_dssp CG--GGTEEEEEEEEETTE
T ss_pred ce--ecceeEEEEEcCCCc
Confidence 65 467799999998743
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=1e-26 Score=208.89 Aligned_cols=213 Identities=13% Similarity=0.167 Sum_probs=177.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeec--cccccccccCceEEEEEcCCCcEEEEEccCCee--------------
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGF--VGKKRRKERGTLLLALGTSNGDILAVDVLTGEM-------------- 64 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp--~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~-------------- 64 (340)
|||+.+++....+. +|...|.+++|++ ++. +|++|+.||.|++||+.++..
T Consensus 187 vwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~---------~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 187 VWDIKKGCCTHVFE----GHNSTVRCLDIVEYKNIK---------YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp EEETTTTEEEEEEC----CCSSCEEEEEEEESSSCE---------EEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred EEECCCCcEEEEEC----CCCCccEEEEEecCCCCC---------EEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 69999999988887 8999999999995 557 899999999999999987652
Q ss_pred ---------EEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC
Q 036605 65 ---------KWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS 135 (340)
Q Consensus 65 ---------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 135 (340)
...+.+ |...|.++ +++++.|++++.||.|++||+.+++.+..+.+|...|.+++|+|++.++++++.
T Consensus 254 ~~~~~~~~~~~~~~~-~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 254 HTPEENPYFVGVLRG-HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp SCGGGCTTEEEEECC-CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred eccCCCeEEEEEccC-ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC
Confidence 344555 88888887 567899999999999999999999999999999999999999999999988665
Q ss_pred c--EEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCC
Q 036605 136 E--VRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSP 213 (340)
Q Consensus 136 ~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (340)
+ |++||+.+++.+..+.+|...|.++.|+ +.++++++. |+.|++||++ .... ... ..+......+ .+
T Consensus 331 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~-dg~v~vwd~~--~~~~--~~~--~~~~~~~~~~--~~ 399 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAA-DGSIRGWDAN--DYSR--KFS--YHHTNLSAIT--TF 399 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEET-TSEEEEEETT--TCCE--EEE--EECTTCCCEE--EE
T ss_pred CCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeC-CCcEEEEECC--CCce--eee--ecCCCCccEE--EE
Confidence 4 9999999999999999999999999997 478999888 9999999984 3321 112 1222222222 33
Q ss_pred CCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 214 NGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 214 ~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
++++.++++++ ||.|++||+.+++.+.
T Consensus 400 -~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 400 -YVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -EECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred -EeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 68889999988 8999999999987765
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.9e-27 Score=210.45 Aligned_cols=202 Identities=13% Similarity=0.129 Sum_probs=165.1
Q ss_pred CCCCCeEEEEeecc-ccccccccCceEEEEEcCCCcEEEEEccC----------CeeEEEecCCCCCCeEEEEEecCCC-
Q 036605 19 EPVVSYSCLACGFV-GKKRRKERGTLLLALGTSNGDILAVDVLT----------GEMKWKSTGRHPGGLAGLAFAKKGR- 86 (340)
Q Consensus 19 ~~~~~v~~l~~sp~-~~~~~~~~~~~~l~~g~~dg~i~i~d~~~----------~~~~~~~~~~h~~~v~~v~~~~~~~- 86 (340)
.|...|++++|+|+ +. +||+|+.+|.|++||+.+ ......+.+ |...|++++|+|++.
T Consensus 126 ~h~~~v~~l~~~p~~~~---------~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNAC---------VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-HQKEGYGLSWNPNLNG 195 (430)
T ss_dssp EESSCCSEEEEETTEEE---------EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-CSSCCCCEEECTTSTT
T ss_pred cCCCcEEEEEECCCCCc---------EEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-CCCCeEEEEeCCCCCC
Confidence 68899999999997 57 899999999999999986 566777777 999999999999988
Q ss_pred EEEEEeCCCcEEEEeCCCCeE-------EEEeecCCCCeeEEEEcc-CCCEEEEec--CcEEEEECCCC---ceeEEeec
Q 036605 87 SLHVVGTNGMASEMKSEMGEV-------IREFKASEKPISSSAFLC-EEKIFALAS--SEVRILSLENG---EEVLKFSD 153 (340)
Q Consensus 87 ~l~s~~~dg~i~~wd~~~~~~-------~~~~~~~~~~i~~l~~~~-~~~~l~~~~--~~i~i~d~~~~---~~~~~~~~ 153 (340)
.|++|+.||.|++||+.++.. ...+..|...|.+++|+| ++.++++++ +.|++||++++ +.+..+..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999999999987321 345678889999999999 677777754 44999999987 56677889
Q ss_pred CCCCeEEEEECCCCCE-EEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC-CEEEEEeCCCcEE
Q 036605 154 DVGPLQYVSASDGAKI-IITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG-TVILAVAESGVAY 231 (340)
Q Consensus 154 ~~~~v~~~~~s~~~~~-l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~s~dg~i~ 231 (340)
|...|.+++|+|++.+ +++++. |+.|++||++.. +.....+. .|...+..+ .| +|++ .+|++++.||.|+
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~-dg~v~vwd~~~~-~~~~~~~~---~h~~~v~~i--~~-sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSA-DKTVALWDLRNL-KLKLHSFE---SHKDEIFQV--QW-SPHNETILASSGTDRRLH 347 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTCT-TSCSEEEE---CCSSCEEEE--EE-CSSCTTEEEEEETTSCCE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeC-CCeEEEEeCCCC-CCCeEEee---cCCCCEEEE--EE-CCCCCCEEEEEeCCCcEE
Confidence 9999999999999985 666666 999999999521 22222222 566666666 66 6777 5799999999999
Q ss_pred EEECCCC
Q 036605 232 SWDLKTV 238 (340)
Q Consensus 232 vwd~~~~ 238 (340)
+||+...
T Consensus 348 iwd~~~~ 354 (430)
T 2xyi_A 348 VWDLSKI 354 (430)
T ss_dssp EEEGGGT
T ss_pred EEeCCCC
Confidence 9999873
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-27 Score=203.94 Aligned_cols=210 Identities=12% Similarity=0.045 Sum_probs=163.4
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeec--cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGF--VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp--~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v 79 (340)
||..+++++..+. ..|...|.+++|+| +++ +|++|+.||+|++||+.+++........|...|.++
T Consensus 109 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~---------~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~ 176 (343)
T 3lrv_A 109 LDSKTNKVLREIE---VDSANEIIYMYGHNEVNTE---------YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG 176 (343)
T ss_dssp EETTTCCEEEEEE---CCCSSCEEEEECCC---CC---------EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEE
T ss_pred eecCCcceeEEee---cCCCCCEEEEEcCCCCCCC---------EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEE
Confidence 5666777666666 35778999999999 999 999999999999999999988766655467789999
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCeEE-EEeec-CCCCeeEEEEccCCCEEEEec-CcEEEEECCCCceeEEeec---
Q 036605 80 AFAKKGRSLHVVGTNGMASEMKSEMGEVI-REFKA-SEKPISSSAFLCEEKIFALAS-SEVRILSLENGEEVLKFSD--- 153 (340)
Q Consensus 80 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~-~~~~~-~~~~i~~l~~~~~~~~l~~~~-~~i~i~d~~~~~~~~~~~~--- 153 (340)
+|+|++.+|++|+.||.|++||+++++.+ ..+.. |..+|.+++|+|++.+|++++ +.|++||+++++.+..+..
T Consensus 177 ~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~ 256 (343)
T 3lrv_A 177 VLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTI 256 (343)
T ss_dssp EECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeeccccc
Confidence 99999999999999999999999999877 77887 999999999999999998854 3599999999877655433
Q ss_pred CCCCeE--EEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCC---CCCEEEEEeCCC
Q 036605 154 DVGPLQ--YVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGE---DGTVILAVAESG 228 (340)
Q Consensus 154 ~~~~v~--~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~s~dg 228 (340)
|...+. +++|+|++++|++++..|+.++||++. .... .... ..+..+ .| .+ +...+++++.||
T Consensus 257 ~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~--~~~~--~~~~-----~~~~~~--~~-~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD--KKTK--NWTK-----DEESAL--CL-QSDTADFTDMDVVCGDG 324 (343)
T ss_dssp -----CCEEEEECTTSSEEEEEETTTTEEEEEEEC--TTTC--SEEE-----EEEEEC--CC-----CCCCEEEEEEETT
T ss_pred ccccccceEEEECCCCCEEEEecCCCCcEEEEEEc--cccc--ceEe-----cCceeE--ec-CccccccceeEEEecCC
Confidence 444444 699999999999977668999999984 2211 1111 111122 33 44 788999999999
Q ss_pred cEEEEEC
Q 036605 229 VAYSWDL 235 (340)
Q Consensus 229 ~i~vwd~ 235 (340)
.+.++-.
T Consensus 325 ~~~~~~~ 331 (343)
T 3lrv_A 325 GIAAILK 331 (343)
T ss_dssp EEEEEEE
T ss_pred ceEEEEe
Confidence 9988753
No 97
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.3e-27 Score=197.76 Aligned_cols=173 Identities=10% Similarity=0.075 Sum_probs=131.3
Q ss_pred CCcEEEEEc-cCCeeEEEecCCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCC---CeeEEEE
Q 036605 51 NGDILAVDV-LTGEMKWKSTGRHPGGLAGLAFAK---KGRSLHVVGTNGMASEMKSEMGEVIREFKASEK---PISSSAF 123 (340)
Q Consensus 51 dg~i~i~d~-~~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~---~i~~l~~ 123 (340)
|+.|++|++ .+|+.+..+.. |...++.++|++ ++..|++++.|++|++||+.+|+.+..+.+|.. .+.+++|
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~-~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFL-MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEE-CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCcEEEEEECCCCceeeeecc-CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 888888888 44777777776 888888888888 678999999999999999999999999986543 5777899
Q ss_pred ccCCCEEEE------------ec--CcEEEEECCCCceeEEe-----ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEE
Q 036605 124 LCEEKIFAL------------AS--SEVRILSLENGEEVLKF-----SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWR 184 (340)
Q Consensus 124 ~~~~~~l~~------------~~--~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd 184 (340)
+|+|.++++ ++ ++|++||..+++.+..+ .+|...+.+..++ +.++++++. |++|+|||
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~-DgTIkIWD 311 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILT-SGTIAIWD 311 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEET-TSCEEEEE
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcC-CCcEEEEE
Confidence 999998754 22 23999999999877554 2555554444443 677888777 99999999
Q ss_pred ccCCCCCccCCceeeecCCCeeee-eecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 185 CDISSKTVNKGPALSMRHSPVAID-CKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
+ .+++....+. +|...+.. + .| +|+|.+|++|+.|++|+|||+
T Consensus 312 l--~tGk~l~tL~---gH~~~vvs~v--af-SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 L--LLGQCTALLP---PVSDQHWSFV--KW-SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp T--TTCSEEEEEC---CC--CCCCEE--EE-CSSSSEEEEECTTSCEEEEEE
T ss_pred C--CCCcEEEEec---CCCCCeEEEE--EE-CCCCCEEEEEECCCcEEEecC
Confidence 9 5665544443 45443332 2 45 899999999999999999985
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=229.78 Aligned_cols=203 Identities=12% Similarity=0.119 Sum_probs=164.9
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
+|...|+|++|+|+++ +||+|+.||+|++|+..+++....+. |...|.+++|+| +++|++++.|+.|+
T Consensus 15 gh~~~V~~lafspdg~---------~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~~L~S~s~D~~v~ 82 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQN---------LLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GIYLVVINAKDTVY 82 (902)
T ss_dssp ECSSCEEEEEEETTTT---------EEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TTEEEEEETTCEEE
T ss_pred CCCCCcEEEEECCCCC---------EEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CCEEEEEECcCeEE
Confidence 6889999999999999 99999999999999998877665543 788999999999 88999999999999
Q ss_pred EEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCcee-----------EEeecCCCCeEEEEECC
Q 036605 99 EMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEV-----------LKFSDDVGPLQYVSASD 165 (340)
Q Consensus 99 ~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~-----------~~~~~~~~~v~~~~~s~ 165 (340)
+||+.+++.+..+. +...|++++|+|++.++++++.+ |++||+.+++.. ..+.+|...|.+++|+|
T Consensus 83 lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 83 VLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 99999999888886 66789999999999999986554 999999988653 23367889999999999
Q ss_pred CC-CEEEEEEcCCCeEEEEEccCCCCCccCCceee---------------ecCCCeeeeeecCCCCCCCCEEEEEeCCCc
Q 036605 166 GA-KIIITAGYGEKHLQVWRCDISSKTVNKGPALS---------------MRHSPVAIDCKNSPNGEDGTVILAVAESGV 229 (340)
Q Consensus 166 ~~-~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~ 229 (340)
++ ..+++++. |+.| +||++ .++....+... ..|...+..+ .| +|+|.+|++++.||.
T Consensus 162 ~~~~~l~~g~~-dg~v-lWd~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v--~f-spdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 162 RDIGTVLISYE-YVTL-TYSLV--ENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQS--LY-HPNSLHIITIHEDNS 234 (902)
T ss_dssp TEEEEEEEECS-SCEE-EEETT--TTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEE--EE-CTTSSEEEEEETTCC
T ss_pred CCCCEEEEEeC-CCcE-EEECC--CCceEEEEecccCCcCCCcccccccccccCCCeEEE--EE-cCCCCEEEEEECCCe
Confidence 74 56666555 9999 99994 33322211100 0123445555 66 899999999999999
Q ss_pred EEEEECCCCCcc
Q 036605 230 AYSWDLKTVSQD 241 (340)
Q Consensus 230 i~vwd~~~~~~~ 241 (340)
|++||+.+++.+
T Consensus 235 i~lWd~~~g~~~ 246 (902)
T 2oaj_A 235 LVFWDANSGHMI 246 (902)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCcEE
Confidence 999999886543
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=3.7e-27 Score=235.61 Aligned_cols=214 Identities=14% Similarity=0.185 Sum_probs=185.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+++.+..+. +|...|++++|+|+++ +|++|+.||.|++||+.+++.+..+.+ |.+.|.+++
T Consensus 641 vw~~~~~~~~~~~~----~h~~~v~~~~~s~~~~---------~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~ 706 (1249)
T 3sfz_A 641 VFKAETGEKLLDIK----AHEDEVLCCAFSSDDS---------YIATCSADKKVKIWDSATGKLVHTYDE-HSEQVNCCH 706 (1249)
T ss_dssp EEETTTCCEEEEEC----CCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEE
T ss_pred EEECCCCCEEEEec----cCCCCEEEEEEecCCC---------EEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEE
Confidence 69999999998887 8999999999999999 999999999999999999999999998 999999999
Q ss_pred Eec--CCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEe-----
Q 036605 81 FAK--KGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKF----- 151 (340)
Q Consensus 81 ~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~----- 151 (340)
|+| ++..+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++. .|++||+.+++....+
T Consensus 707 ~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 786 (1249)
T 3sfz_A 707 FTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRF 786 (1249)
T ss_dssp ECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCC
T ss_pred EecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccccc
Confidence 999 5568999999999999999999999999999999999999999999988655 4999998776543322
Q ss_pred --------------------------------------------------ecCCCCeEEEEECCCCCEEEEEEcCCCeEE
Q 036605 152 --------------------------------------------------SDDVGPLQYVSASDGAKIIITAGYGEKHLQ 181 (340)
Q Consensus 152 --------------------------------------------------~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~ 181 (340)
.+|...+.+++|+|++.++++++. |+.|+
T Consensus 787 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-dg~v~ 865 (1249)
T 3sfz_A 787 FLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS-QYCVE 865 (1249)
T ss_dssp C--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS-SSCEE
T ss_pred ccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC-CCeEE
Confidence 167788999999999999999777 99999
Q ss_pred EEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 182 VWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 182 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+|++ .++.....+. .|...+..+ .| +|++.++++++.||.|++|++..
T Consensus 866 vwd~--~~~~~~~~~~---~h~~~v~~v--~~-spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 866 LWNI--DSRLKVADCR---GHLSWVHGV--MF-SPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEET--TTTEEEEEEC---CCSSCEEEE--EE-CTTSSEEEEEETTSCEEEEEHHH
T ss_pred EEEc--CCCceeeecC---CCccceEEE--EE-CCCCCEEEEEeCCCeEEEEEccc
Confidence 9998 4443333333 566666666 66 89999999999999999999765
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=9.3e-27 Score=208.09 Aligned_cols=209 Identities=10% Similarity=0.177 Sum_probs=180.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++.+..+. +|...|++++|+ +. +|++|+.||.|++||+.+++....+.+ |...|.+++
T Consensus 143 vwd~~~~~~~~~~~----~h~~~v~~~~~~--~~---------~l~s~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~ 206 (445)
T 2ovr_B 143 VWSAVTGKCLRTLV----GHTGGVWSSQMR--DN---------IIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMH 206 (445)
T ss_dssp EEETTTCCEEEECC----CCSSCEEEEEEE--TT---------EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEE
T ss_pred EEECCCCcEEEEEc----CCCCCEEEEEec--CC---------EEEEEeCCCeEEEEECCcCcEEEEECC-CCCcEEEEE
Confidence 69999999998887 899999999997 56 799999999999999999999999988 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~~~v 158 (340)
|+ ++.|++++.||.|++||+.+++.+..+..|...+.++++ ++.++++++. .|++||+.+++.+..+.+|...|
T Consensus 207 ~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 207 LH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 282 (445)
T ss_dssp EE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE
T ss_pred ec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce
Confidence 96 678999999999999999999999999999999999998 6777777544 49999999999999999999999
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.++.| ++.++++++. |+.|++||+ .+++....+. .|...+..+ ..++.++++++.||.|++||+.++
T Consensus 283 ~~~~~--~~~~l~~~~~-d~~i~i~d~--~~~~~~~~~~---~~~~~v~~~-----~~~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 283 YSLQF--DGIHVVSGSL-DTSIRVWDV--ETGNCIHTLT---GHQSLTSGM-----ELKDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EEEEE--CSSEEEEEET-TSCEEEEET--TTCCEEEEEC---CCCSCEEEE-----EEETTEEEEEETTSCEEEEETTTC
T ss_pred EEEEE--CCCEEEEEeC-CCeEEEEEC--CCCCEEEEEc---CCcccEEEE-----EEeCCEEEEEeCCCeEEEEECCCC
Confidence 99999 7889999888 999999999 4444333332 455555555 456789999999999999999887
Q ss_pred CccC
Q 036605 239 SQDE 242 (340)
Q Consensus 239 ~~~~ 242 (340)
+.+.
T Consensus 350 ~~~~ 353 (445)
T 2ovr_B 350 QCLQ 353 (445)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 6554
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-26 Score=195.10 Aligned_cols=204 Identities=8% Similarity=0.138 Sum_probs=167.3
Q ss_pred CceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEec-CC
Q 036605 7 GSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAK-KG 85 (340)
Q Consensus 7 g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~-~~ 85 (340)
++....+. .|...|.+++| ++. +|++|+.||.|++|| .++....+.. |...|.+++|+| ++
T Consensus 94 ~~~~~~~~----~~~~~i~~~~~--~~~---------~l~~~~~d~~i~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 94 EDPLYTLI----GHQGNVCSLSF--QDG---------VVISGSWDKTAKVWK--EGSLVYNLQA-HNASVWDAKVVSFSE 155 (313)
T ss_dssp SCC-CEEC----CCSSCEEEEEE--ETT---------EEEEEETTSEEEEEE--TTEEEEEEEC-CSSCEEEEEEEETTT
T ss_pred CCcccchh----hcccCEEEEEe--cCC---------EEEEEeCCCCEEEEc--CCcEEEeccc-CCCceeEEEEccCCC
Confidence 34455555 78999999999 467 899999999999999 6777878887 999999999998 89
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEeec-CCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEeecCCCCeEEEE
Q 036605 86 RSLHVVGTNGMASEMKSEMGEVIREFKA-SEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKFSDDVGPLQYVS 162 (340)
Q Consensus 86 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 162 (340)
+.|++++.||.|++|| .++....+.. +...+.+++|+|++. +++++ +.|++||+++++.+..+..|...|.+++
T Consensus 156 ~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 232 (313)
T 3odt_A 156 NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIK 232 (313)
T ss_dssp TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEE
Confidence 9999999999999999 4566667776 888999999999998 55543 3499999999999999999999999999
Q ss_pred ECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 163 ASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 163 ~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
|+|++ .|++++. |+.|++||+ ..++....+. .+...+..+ .| ++++. +++++.||.|++|++.+.+...
T Consensus 233 ~~~~~-~l~~~~~-dg~v~iwd~--~~~~~~~~~~---~~~~~i~~~--~~-~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 233 LLPNG-DIVSCGE-DRTVRIWSK--ENGSLKQVIT---LPAISIWSV--DC-MSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp ECTTS-CEEEEET-TSEEEEECT--TTCCEEEEEE---CSSSCEEEE--EE-CTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred EecCC-CEEEEec-CCEEEEEEC--CCCceeEEEe---ccCceEEEE--EE-ccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 99999 5888777 999999998 4444333333 444455555 55 78877 6679999999999998866554
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.7e-27 Score=202.84 Aligned_cols=216 Identities=8% Similarity=0.007 Sum_probs=162.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc---------CCeeEEEecCC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL---------TGEMKWKSTGR 71 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~---------~~~~~~~~~~~ 71 (340)
|||+.+|+.+..+. ...|.++.|+|+ +++|+.|++|++|+.. +++.+..+...
T Consensus 62 iwd~~~~~~~~~~~------~~~v~~~~~~~~------------~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 62 FTQLKDSKTITTIT------TPNPRTGGEHPA------------IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEESSSSCEEEEE------EECCCTTCCCCS------------EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred EEECCCCcEEEEEe------cCCceeeeeCCc------------eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 58888887776665 245666677652 7889999999999654 55555555544
Q ss_pred CCCCeEEEEEec--CCCEEEEEeCCCcEEEEeCCCCeEEEEee-cCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCc
Q 036605 72 HPGGLAGLAFAK--KGRSLHVVGTNGMASEMKSEMGEVIREFK-ASEKPISSSAFLCEEKIFALASSE--VRILSLENGE 146 (340)
Q Consensus 72 h~~~v~~v~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~ 146 (340)
|.+.|.+++|+| ++++|++++.||.|++||+.+++...... .+...+.+++|+|++.++++++.+ |++||+++++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 888999999999 99999999999999999999999866653 345579999999999999986554 9999999998
Q ss_pred ee-EEeec-CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEE
Q 036605 147 EV-LKFSD-DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAV 224 (340)
Q Consensus 147 ~~-~~~~~-~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (340)
.+ ..+.. |..+|.+++|+|++.+|++++. + .|++||++ ..+....+.....+...+......| +|++.+|+++
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~-~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~ 278 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVECD-Q-TVVCFDLR--KDVGTLAYPTYTIPEFKTGTVTYDI-DDSGKNMIAY 278 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEES-S-BEEEEETT--SSTTCBSSCCCBC-----CCEEEEE-CTTSSEEEEE
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEeC-C-eEEEEEcC--CCCcceeecccccccccccceEEEE-CCCCCEEEEe
Confidence 87 78887 9999999999999999999774 4 99999995 3332222210001111111001144 8999999999
Q ss_pred eC-CCcEEEEECCCCC
Q 036605 225 AE-SGVAYSWDLKTVS 239 (340)
Q Consensus 225 s~-dg~i~vwd~~~~~ 239 (340)
+. |+.|++|++....
T Consensus 279 s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKT 294 (343)
T ss_dssp ETTTTEEEEEEECTTT
T ss_pred cCCCCcEEEEEEcccc
Confidence 98 9999999987644
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=2.5e-26 Score=213.08 Aligned_cols=214 Identities=13% Similarity=0.098 Sum_probs=177.0
Q ss_pred eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC----eeEEEecCCCCCC-eEEEEEec
Q 036605 9 LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG----EMKWKSTGRHPGG-LAGLAFAK 83 (340)
Q Consensus 9 ~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~----~~~~~~~~~h~~~-v~~v~~~~ 83 (340)
+...|.+....|...|++++|+|+++ +|++++ ++.|.+||+.++ +....+.+ |.+. |++++|+|
T Consensus 6 ~~~~~~~~~~~~~~~v~~~~~spdg~---------~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp 74 (615)
T 1pgu_A 6 LKEIIPPQPSTQRNFTTHLSYDPTTN---------AIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSP 74 (615)
T ss_dssp EEEEECCCCCCCTTCCCCCEEETTTT---------EEEEEE-TTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECS
T ss_pred hhhccCCCCCCccCceeEEEECCCCC---------EEEEec-CCeEEEEECCCCCCccccceEEec-CCCceEEEEEECc
Confidence 34445544457889999999999999 899888 889999999998 88888988 9999 99999999
Q ss_pred --CCCEEEEEeCCCcEEEEeCCCC--------eEEEEeecCCCCeeEEEEccCCCEEEEecCc------EEEEECCCCce
Q 036605 84 --KGRSLHVVGTNGMASEMKSEMG--------EVIREFKASEKPISSSAFLCEEKIFALASSE------VRILSLENGEE 147 (340)
Q Consensus 84 --~~~~l~s~~~dg~i~~wd~~~~--------~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~------i~i~d~~~~~~ 147 (340)
++++|++++.||.|++||+.++ ..+..+..|...|.+++|+|+++++++++.+ |++|| .++.
T Consensus 75 ~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~ 152 (615)
T 1pgu_A 75 IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNS 152 (615)
T ss_dssp STTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCE
T ss_pred CCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCc
Confidence 9999999999999999999755 6667788899999999999999999886543 55665 6778
Q ss_pred eEEeecCCCCeEEEEECCCCC-EEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCC---eeeeeecCCCCCC-CCEEE
Q 036605 148 VLKFSDDVGPLQYVSASDGAK-IIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSP---VAIDCKNSPNGED-GTVIL 222 (340)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~~~~-~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~l~ 222 (340)
+..+.+|...|.+++|+|++. .+++++. |+.|++||+ ..++....+. .|.. .+..+ .| +|+ +.+|+
T Consensus 153 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~vwd~--~~~~~~~~~~---~~~~~~~~v~~~--~~-~~~~~~~l~ 223 (615)
T 1pgu_A 153 LGEVSGHSQRINACHLKQSRPMRSMTVGD-DGSVVFYQG--PPFKFSASDR---THHKQGSFVRDV--EF-SPDSGEFVI 223 (615)
T ss_dssp EEECCSCSSCEEEEEECSSSSCEEEEEET-TTEEEEEET--TTBEEEEEEC---SSSCTTCCEEEE--EE-CSTTCCEEE
T ss_pred ceeeecCCccEEEEEECCCCCcEEEEEeC-CCcEEEEeC--CCcceeeeec---ccCCCCceEEEE--EE-CCCCCCEEE
Confidence 888999999999999999998 6777666 999999998 3443333222 4554 55555 55 788 99999
Q ss_pred EEeCCCcEEEEECCCCCccCCC
Q 036605 223 AVAESGVAYSWDLKTVSQDEKT 244 (340)
Q Consensus 223 ~~s~dg~i~vwd~~~~~~~~~~ 244 (340)
+++.||.|++||+.+++.+..+
T Consensus 224 ~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 224 TVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp EEETTCCEEEEETTTCCEEEEC
T ss_pred EEeCCCeEEEEECCCCCEeEEe
Confidence 9999999999999887765544
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=5.5e-26 Score=203.09 Aligned_cols=212 Identities=14% Similarity=0.252 Sum_probs=179.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||+.+++....+. +|...|.+++|+ +. ++++|+.||.|++||+.+++....+.+ |...|.+++
T Consensus 183 vwd~~~~~~~~~~~----~h~~~v~~~~~~--~~---------~l~s~s~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~ 246 (445)
T 2ovr_B 183 VWNAETGECIHTLY----GHTSTVRCMHLH--EK---------RVVSGSRDATLRVWDIETGQCLHVLMG-HVAAVRCVQ 246 (445)
T ss_dssp EEETTTTEEEEEEC----CCSSCEEEEEEE--TT---------EEEEEETTSEEEEEESSSCCEEEEEEC-CSSCEEEEE
T ss_pred EEECCcCcEEEEEC----CCCCcEEEEEec--CC---------EEEEEeCCCEEEEEECCCCcEEEEEcC-CcccEEEEE
Confidence 69999999988887 899999999995 56 799999999999999999999989888 999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecCCCCe
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDDVGPL 158 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~~~v 158 (340)
| ++..|++++.||.|++||+.+++.+..+..|...+.++++ ++.++++++. .|++||+.+++.+..+.+|...+
T Consensus 247 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v 322 (445)
T 2ovr_B 247 Y--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 322 (445)
T ss_dssp E--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE
T ss_pred E--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE
Confidence 9 6889999999999999999999999999999999999998 7888887654 49999999999999999999999
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.++.++ +.++++++. |+.|++||++ +++....+.....|...+..+ . .++.++++++.||.|++||+.++
T Consensus 323 ~~~~~~--~~~l~~~~~-dg~i~vwd~~--~~~~~~~~~~~~~~~~~v~~~--~---~~~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 323 SGMELK--DNILVSGNA-DSTVKIWDIK--TGQCLQTLQGPNKHQSAVTCL--Q---FNKNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEEEEE--TTEEEEEET-TSCEEEEETT--TCCEEEEECSTTSCSSCEEEE--E---ECSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEEe--CCEEEEEeC-CCeEEEEECC--CCcEEEEEccCCCCCCCEEEE--E---ECCCEEEEEeCCCeEEEEECCCC
Confidence 988884 568998887 9999999983 444333222111255555555 3 34689999999999999999987
Q ss_pred CccC
Q 036605 239 SQDE 242 (340)
Q Consensus 239 ~~~~ 242 (340)
+.+.
T Consensus 393 ~~~~ 396 (445)
T 2ovr_B 393 EFIR 396 (445)
T ss_dssp CEEE
T ss_pred ceee
Confidence 7655
No 105
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=7.4e-27 Score=205.34 Aligned_cols=217 Identities=11% Similarity=0.014 Sum_probs=150.0
Q ss_pred CccCCCCceeee-eeCCCCCCCCCeEEEEeec--------cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCC
Q 036605 1 IWSTNDGSLLAE-WKQPDGEPVVSYSCLACGF--------VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGR 71 (340)
Q Consensus 1 vwd~~~g~~~~~-~~~~~~~~~~~v~~l~~sp--------~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~ 71 (340)
|||+.+++.... ......+|...|.+++|+| +++ +||+|+.|++|+|||+.++.....+..
T Consensus 115 lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~---------~las~s~D~tv~~Wd~~~~~~~~~~~~- 184 (393)
T 4gq1_A 115 LIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ---------VIASVGDDCTLIIWRLTDEGPILAGYP- 184 (393)
T ss_dssp EEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE---------EEEEEETTSEEEEEEEETTEEEEEEEE-
T ss_pred EEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC---------EEEEEECCCeEEEEECCCCceeeeecC-
Confidence 588888865432 1111148999999999998 778 999999999999999998887777777
Q ss_pred CCCCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCeEEEE-------------------------eecCCCCeeEEEEc-
Q 036605 72 HPGGLAGLAFAKKGR-SLHVVGTNGMASEMKSEMGEVIRE-------------------------FKASEKPISSSAFL- 124 (340)
Q Consensus 72 h~~~v~~v~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~-------------------------~~~~~~~i~~l~~~- 124 (340)
|...|.+++|+|++. +|++++.|+.|++||+.+++.... ..+|...+.++.|+
T Consensus 185 ~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 185 LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence 889999999999875 799999999999999988764332 13456678888887
Q ss_pred cCCCEEEEecCc--EEEEECCCCceeEEeecCCCCeEEEEEC-------------------CCCCEEEEEEcCCCeEEEE
Q 036605 125 CEEKIFALASSE--VRILSLENGEEVLKFSDDVGPLQYVSAS-------------------DGAKIIITAGYGEKHLQVW 183 (340)
Q Consensus 125 ~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~s-------------------~~~~~l~s~~~~d~~i~iw 183 (340)
|++..+++++.+ +++||+..++....+..|...+..+.+. +.+..+++++..|+.|++|
T Consensus 265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lw 344 (393)
T 4gq1_A 265 SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLI 344 (393)
T ss_dssp TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEE
Confidence 799999886554 9999998877666665555444433332 2344555555559999999
Q ss_pred EccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 184 RCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 184 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
|+ ..++..... ..|...+..+ +| +|+|.+|++++.+| +.+|.+.
T Consensus 345 d~--~~~~~~~~~---~~~~~~V~sv--af-spdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 345 NT--YEKDSNSIP---IQLGMPIVDF--CW-HQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ET--TCTTCCEEE---EECSSCEEEE--EE-CTTSSEEEEEESSE-EEEEEEG
T ss_pred EC--CCCcEEEEe---cCCCCcEEEE--EE-cCCCCEEEEEeCCC-eEEEEEe
Confidence 98 444433322 3666667777 77 89999999999887 7777654
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.4e-26 Score=197.93 Aligned_cols=199 Identities=10% Similarity=-0.004 Sum_probs=162.8
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe---eEEEecCCCCCCeEEEEEecCCC-EEEEEeCC
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE---MKWKSTGRHPGGLAGLAFAKKGR-SLHVVGTN 94 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~---~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d 94 (340)
+|...|++++|+|+++ +|++|+.||.|++||+.+++ ....+.. |...|.+++|+|+++ .|++++.|
T Consensus 9 ~h~~~v~~~~~s~~~~---------~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d 78 (342)
T 1yfq_A 9 APKDYISDIKIIPSKS---------LLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp CCSSCEEEEEEEGGGT---------EEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEETT
T ss_pred CCCCcEEEEEEcCCCC---------EEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEcCC
Confidence 7999999999999999 99999999999999999887 2334445 999999999999999 99999999
Q ss_pred CcEEEEeC-CCCeEEEEeec--CCCCeeEEEEccCCCEEEEecCc--EEEEECCC---------CceeEEeecCCCCeEE
Q 036605 95 GMASEMKS-EMGEVIREFKA--SEKPISSSAFLCEEKIFALASSE--VRILSLEN---------GEEVLKFSDDVGPLQY 160 (340)
Q Consensus 95 g~i~~wd~-~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~---------~~~~~~~~~~~~~v~~ 160 (340)
|.|++||+ .+++. ..+.. |...|.+++|+| +.++++++.+ |++||+++ ++.+..+. |...+.+
T Consensus 79 g~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~ 155 (342)
T 1yfq_A 79 GEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFT 155 (342)
T ss_dssp SCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEE
T ss_pred CeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEE
Confidence 99999999 87765 66778 999999999999 8888886554 99999987 66666666 8899999
Q ss_pred EEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCC-CCCEEEEEeCCCcEEEEECCCC
Q 036605 161 VSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGE-DGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 161 ~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
++|+|++ +++++. |+.|++||++.. ... ........+...+..+ .+ ++ ++.++++++.||.|++|++...
T Consensus 156 ~~~~~~~--l~~~~~-d~~i~i~d~~~~-~~~-~~~~~~~~~~~~i~~i--~~-~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 156 MDTNSSR--LIVGMN-NSQVQWFRLPLC-EDD-NGTIEESGLKYQIRDV--AL-LPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEECSSE--EEEEES-TTEEEEEESSCC-TTC-CCEEEECSCSSCEEEE--EE-CSGGGCEEEEEETTSEEEEEECCTT
T ss_pred EEecCCc--EEEEeC-CCeEEEEECCcc-ccc-cceeeecCCCCceeEE--EE-CCCCCCEEEEEecCCcEEEEEEcCC
Confidence 9999987 777677 999999999420 211 1111222344444444 55 78 8999999999999999999875
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.4e-28 Score=213.93 Aligned_cols=208 Identities=11% Similarity=0.096 Sum_probs=162.0
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc---CCeeEEEecC-----------CCCCCeEEEE--Ee
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL---TGEMKWKSTG-----------RHPGGLAGLA--FA 82 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~---~~~~~~~~~~-----------~h~~~v~~v~--~~ 82 (340)
+|...|++++|+|+++ +|++|+.||.|++||+. +++....+.. .+...+.++. ++
T Consensus 109 ~h~~~v~~~~~~~~~~---------~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 179 (437)
T 3gre_A 109 DCSSTVTQITMIPNFD---------AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN 179 (437)
T ss_dssp ECSSCEEEEEECTTSS---------EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEeCCCC---------EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEc
Confidence 4889999999999999 99999999999999994 5543332221 1456677777 56
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEEEEeec--CCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEee-cCCCC
Q 036605 83 KKGRSLHVVGTNGMASEMKSEMGEVIREFKA--SEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFS-DDVGP 157 (340)
Q Consensus 83 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~-~~~~~ 157 (340)
+++..|++++.|+.|++||+++++.+..+.. |...|.+++|+|++.+|++++.+ |++||+++++.+..+. .|...
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAP 259 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCc
Confidence 7899999999999999999999999999987 78899999999999999986655 9999999998888885 78889
Q ss_pred eEEEEEC----CCCCEEEEEEcCCCeEEEEEccCCCCCccCCce----------ee-----------e--cCCCeeeeee
Q 036605 158 LQYVSAS----DGAKIIITAGYGEKHLQVWRCDISSKTVNKGPA----------LS-----------M--RHSPVAIDCK 210 (340)
Q Consensus 158 v~~~~~s----~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~----------~~-----------~--~~~~~~~~~~ 210 (340)
|.+++|+ +++.+|++++. |+.|++||++ +++....+. +. . .|...+..+
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~-dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l- 335 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSS-KTFLTIWNFV--KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI- 335 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEEST-TEEEEEEETT--TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE-
T ss_pred eEEEEeccccCCCccEEEEEcC-CCcEEEEEcC--CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE-
Confidence 9999654 56778888776 9999999994 333222111 00 0 022222223
Q ss_pred cCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 211 NSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 211 ~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+ + ++.+|++++.||.|++||+.+++...
T Consensus 336 -~~-~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 336 -SV-S-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp -EE-E-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred -EE-C-CceEEEecCCCCeEEEEECCCcccce
Confidence 33 4 56899999999999999999877655
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=7.9e-27 Score=207.95 Aligned_cols=214 Identities=14% Similarity=0.232 Sum_probs=170.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeE---EEecCCCCCCeE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMK---WKSTGRHPGGLA 77 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~---~~~~~~h~~~v~ 77 (340)
|||+.+++.+..+. +|...|.+++|+ +. ++++|+.||.|++||+.++... ..+.+ |.+.|.
T Consensus 197 vwd~~~~~~~~~~~----~h~~~v~~l~~~--~~---------~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~ 260 (435)
T 1p22_A 197 VWDVNTGEMLNTLI----HHCEAVLHLRFN--NG---------MMVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVN 260 (435)
T ss_dssp EEESSSCCEEEEEC----CCCSCEEEEECC--TT---------EEEEEETTSCEEEEECSSSSCCEEEEEECC-CSSCEE
T ss_pred EEECCCCcEEEEEc----CCCCcEEEEEEc--CC---------EEEEeeCCCcEEEEeCCCCCCceeeeEecC-CCCcEE
Confidence 69999999998887 789999999997 45 7999999999999999987644 55666 999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecCC
Q 036605 78 GLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDDV 155 (340)
Q Consensus 78 ~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~ 155 (340)
+++| +++.|++++.||.|++||+.+++.+..+..|...+.+++++ +.++++++. .|++||+++++.+..+.+|.
T Consensus 261 ~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~ 336 (435)
T 1p22_A 261 VVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE 336 (435)
T ss_dssp EEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred EEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCc
Confidence 9999 68899999999999999999999999999999999999984 567777544 49999999999999999999
Q ss_pred CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccC----CceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEE
Q 036605 156 GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNK----GPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAY 231 (340)
Q Consensus 156 ~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~ 231 (340)
..|.+++| ++.+|++++. ||.|++||++........ .......|...+..+ . .++.+|++++.||.|+
T Consensus 337 ~~v~~~~~--~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~---~~~~~l~s~s~Dg~i~ 408 (435)
T 1p22_A 337 ELVRCIRF--DNKRIVSGAY-DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL--Q---FDEFQIVSSSHDDTIL 408 (435)
T ss_dssp SCEEEEEC--CSSEEEEEET-TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE--E---ECSSCEEECCSSSEEE
T ss_pred CcEEEEEe--cCCEEEEEeC-CCcEEEEECCCCCCccccccchheeeccCCCCCeEEE--E---eCCCEEEEEeCCCEEE
Confidence 99999999 6789999887 999999998422211000 111122555555555 2 3678899999999999
Q ss_pred EEECCCCCccC
Q 036605 232 SWDLKTVSQDE 242 (340)
Q Consensus 232 vwd~~~~~~~~ 242 (340)
+||+.+.....
T Consensus 409 iwd~~~~~~~~ 419 (435)
T 1p22_A 409 IWDFLNDPAAQ 419 (435)
T ss_dssp EEC--------
T ss_pred EEECCCCCCcc
Confidence 99998755443
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=1.1e-26 Score=202.26 Aligned_cols=170 Identities=14% Similarity=0.133 Sum_probs=144.5
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEE-ecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWK-STGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~~h~~~v~~v 79 (340)
|||+.+++.+..+. |...|.+++|+|+++ +|++++.+ .+.+|+..+++.... ....|...|.++
T Consensus 161 iwd~~~~~~~~~~~-----~~~~V~~v~fspdg~---------~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v 225 (365)
T 4h5i_A 161 IIDPSDLTEKFEIE-----TRGEVKDLHFSTDGK---------VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKI 225 (365)
T ss_dssp EEETTTTEEEEEEE-----CSSCCCEEEECTTSS---------EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEE
T ss_pred EeECCCCcEEEEeC-----CCCceEEEEEccCCc---------eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEE
Confidence 69999999888776 557899999999999 89988855 577777777765433 333488899999
Q ss_pred EEecCCCEEEEEeCCC----cEEEEeCCCCeE----EEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeE
Q 036605 80 AFAKKGRSLHVVGTNG----MASEMKSEMGEV----IREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVL 149 (340)
Q Consensus 80 ~~~~~~~~l~s~~~dg----~i~~wd~~~~~~----~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~ 149 (340)
+|+|+++.+++++.|+ .+..|++..+.. ...+..|...|++++|+|+|++|++++.+ |+|||+.+++.+.
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEE
Confidence 9999999999999886 688899876653 34567888999999999999999987655 9999999999988
Q ss_pred Ee-ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 150 KF-SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 150 ~~-~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
.+ .+|...|++++|+|||++|++++. |++|+||+++
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~-D~tvrvw~ip 342 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSA-ANTIHIIKLP 342 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEET-TSEEEEEECC
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeC-CCeEEEEEcC
Confidence 86 789999999999999999999888 9999999994
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=8.7e-27 Score=202.30 Aligned_cols=212 Identities=11% Similarity=0.121 Sum_probs=165.0
Q ss_pred CccCCC-Ccee-eeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEE
Q 036605 1 IWSTND-GSLL-AEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~-g~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 78 (340)
|||+.+ +..+ ..+. +|...|++++|+|+++ +|++|+.||.|++||+.+++... +.. |...|.+
T Consensus 68 iw~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~---------~l~s~~~dg~v~iwd~~~~~~~~-~~~-~~~~v~~ 132 (368)
T 3mmy_A 68 CWEVQDSGQTIPKAQQ----MHTGPVLDVCWSDDGS---------KVFTASCDKTAKMWDLSSNQAIQ-IAQ-HDAPVKT 132 (368)
T ss_dssp EEEECTTSCEEEEEEE----ECSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTTEEEE-EEE-CSSCEEE
T ss_pred EEEcCCCCceeEEEec----cccCCEEEEEECcCCC---------EEEEEcCCCcEEEEEcCCCCcee-ecc-ccCceEE
Confidence 688887 5554 5665 7899999999999999 99999999999999999998665 444 9999999
Q ss_pred EEE--ecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC-----------------------------------------
Q 036605 79 LAF--AKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE----------------------------------------- 115 (340)
Q Consensus 79 v~~--~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~----------------------------------------- 115 (340)
++| ++++.+|++++.||.|++||+++++.+..+..+.
T Consensus 133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 212 (368)
T 3mmy_A 133 IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLK 212 (368)
T ss_dssp EEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCS
T ss_pred EEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccccc
Confidence 999 8899999999999999999999887665554332
Q ss_pred CCeeEEEEccCCCE----EEEec--CcEEEEECCCC---ceeEEeecCCC------------CeEEEEECCCCCEEEEEE
Q 036605 116 KPISSSAFLCEEKI----FALAS--SEVRILSLENG---EEVLKFSDDVG------------PLQYVSASDGAKIIITAG 174 (340)
Q Consensus 116 ~~i~~l~~~~~~~~----l~~~~--~~i~i~d~~~~---~~~~~~~~~~~------------~v~~~~~s~~~~~l~s~~ 174 (340)
..+.++++.++... +++++ +.|++||+... ..+..+..|.. .|.+++|+|++++|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~ 292 (368)
T 3mmy_A 213 HQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG 292 (368)
T ss_dssp SCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc
Confidence 22344444444332 55543 44999999887 45667777765 799999999999999988
Q ss_pred cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 175 YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 175 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
. |+.|++||+ .+++....+. .|...+..+ .| +|++.+|++++.|+..+.|++.
T Consensus 293 ~-dg~i~iwd~--~~~~~~~~~~---~~~~~v~~~--~~-s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 293 S-DGRFSFWDK--DARTKLKTSE---QLDQPISAC--CF-NHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp T-TSCEEEEET--TTTEEEEECC---CCSSCEEEE--EE-CTTSSCEEEEECCCSTTCGGGC
T ss_pred c-CCeEEEEEC--CCCcEEEEec---CCCCCceEE--EE-CCCCCeEEEEeccccccccccc
Confidence 8 999999999 4554444333 556666666 66 8999999999999866555543
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=6.8e-26 Score=196.47 Aligned_cols=213 Identities=10% Similarity=0.106 Sum_probs=153.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
||+..+.+.+.++. .|...|+|++|+|+++ +|++|+.+| +++||+.+++....... ..+..++
T Consensus 3 i~s~~~~~~~~~~~----~h~~~V~~v~fs~dg~---------~la~g~~~~-~~iw~~~~~~~~~~~~~---~~~~~~~ 65 (355)
T 3vu4_A 3 LGSMITRNPIVPEN----HVSNPVTDYEFNQDQS---------CLILSTLKS-FEIYNVHPVAHIMSQEM---RHLSKVR 65 (355)
T ss_dssp --------------------CCCCCEEEECTTSS---------EEEEECSSE-EEEEEETTEEEEEEEEC---SCCCEEE
T ss_pred cccccccCCccccc----cCCCceEEEEECCCCC---------EEEEEcCCE-EEEEecCCcceeeeeec---CCeEEEE
Confidence 46666666665555 7899999999999999 899998776 78999998876655442 2588889
Q ss_pred EecCCCEE-EEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCC-------------------------------
Q 036605 81 FAKKGRSL-HVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEK------------------------------- 128 (340)
Q Consensus 81 ~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~------------------------------- 128 (340)
+.++++.+ ++++.|+.|++||+.+++.+..+. +...|.+++++++..
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~ 144 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCE 144 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEE
T ss_pred EcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEE
Confidence 99888877 556778999999999999888876 556788888877532
Q ss_pred ----EEEEe----cCcEEEEECCCCc----------------eeEEeecCCCCeEEEEECCCCCEEEEEEcCCCe-EEEE
Q 036605 129 ----IFALA----SSEVRILSLENGE----------------EVLKFSDDVGPLQYVSASDGAKIIITAGYGEKH-LQVW 183 (340)
Q Consensus 129 ----~l~~~----~~~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~-i~iw 183 (340)
+++++ ++.|++||+.++. .+..+.+|...|.+++|+|++.+|++++. |++ |++|
T Consensus 145 ~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~-d~~~v~iw 223 (355)
T 3vu4_A 145 FSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ-DGTIIRVF 223 (355)
T ss_dssp EETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET-TCSEEEEE
T ss_pred EEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC-CCCEEEEE
Confidence 22221 2237777777654 15678899999999999999999999888 998 9999
Q ss_pred EccCCCCCccCCceeeec-CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 184 RCDISSKTVNKGPALSMR-HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 184 d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
|+ .+++.... +..+ |...+..+ .| +|++.+|++++.||.|++||+....
T Consensus 224 d~--~~~~~~~~--~~~g~h~~~v~~~--~~-s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 224 KT--EDGVLVRE--FRRGLDRADVVDM--KW-STDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp ET--TTCCEEEE--EECTTCCSCEEEE--EE-CTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EC--CCCcEEEE--EEcCCCCCcEEEE--EE-CCCCCEEEEEECCCEEEEEEccCCC
Confidence 99 44443322 2212 66666666 67 8999999999999999999998753
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.6e-26 Score=205.52 Aligned_cols=202 Identities=14% Similarity=0.114 Sum_probs=164.3
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe---eEEEecC----------------------------
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE---MKWKSTG---------------------------- 70 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~---~~~~~~~---------------------------- 70 (340)
.++.|++|+|+|+ +|+++ .++.|++||+.+|+ .+..+..
T Consensus 5 ~p~~~v~~s~dg~---------~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (450)
T 2vdu_B 5 HPLQNLLTSRDGS---------LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENK 74 (450)
T ss_dssp CCCCEEEECSSSS---------EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------
T ss_pred ccEEEEEecCCCC---------EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccc
Confidence 5788999999999 66665 57899999999998 5555442
Q ss_pred -------------------------CCCCCeEEEEEecCCCEE-EEEeCCCcEEEEeCC--CCeEEEEee--cCCCCeeE
Q 036605 71 -------------------------RHPGGLAGLAFAKKGRSL-HVVGTNGMASEMKSE--MGEVIREFK--ASEKPISS 120 (340)
Q Consensus 71 -------------------------~h~~~v~~v~~~~~~~~l-~s~~~dg~i~~wd~~--~~~~~~~~~--~~~~~i~~ 120 (340)
.|.+.|++++|+|++++| ++++.||.|++||+. +++.+..+. .+...|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 154 (450)
T 2vdu_B 75 KLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNA 154 (450)
T ss_dssp -------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEE
T ss_pred ccccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceE
Confidence 134479999999999996 888899999999999 888777776 56788999
Q ss_pred EEEccCCCEEEEecCc--EEEEECCCCceeE----EeecCCCCeEEEEECCC---CCEEEEEEcCCCeEEEEEccCCCCC
Q 036605 121 SAFLCEEKIFALASSE--VRILSLENGEEVL----KFSDDVGPLQYVSASDG---AKIIITAGYGEKHLQVWRCDISSKT 191 (340)
Q Consensus 121 l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~----~~~~~~~~v~~~~~s~~---~~~l~s~~~~d~~i~iwd~~~~~~~ 191 (340)
++|+|++.+|++++.+ +++|++.+++... .+.+|...|.+++|+|+ +++|++++. |+.|++||++ .+.
T Consensus 155 ~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-d~~i~vwd~~--~~~ 231 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR-DEHIKISHYP--QCF 231 (450)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET-TSCEEEEEES--CTT
T ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC-CCcEEEEECC--CCc
Confidence 9999999999987654 9999998876544 77889999999999999 989999887 9999999993 433
Q ss_pred ccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 192 VNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.... +..+|...+..+ .| + ++.+|++++.||.|++||+.+++.+.
T Consensus 232 ~~~~--~~~~h~~~v~~~--~~-s-d~~~l~s~~~d~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 232 IVDK--WLFGHKHFVSSI--CC-G-KDYLLLSAGGDDKIFAWDWKTGKNLS 276 (450)
T ss_dssp CEEE--ECCCCSSCEEEE--EE-C-STTEEEEEESSSEEEEEETTTCCEEE
T ss_pred eeee--eecCCCCceEEE--EE-C-CCCEEEEEeCCCeEEEEECCCCcEee
Confidence 2221 122566666666 66 6 99999999999999999999876544
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=3e-25 Score=196.85 Aligned_cols=215 Identities=18% Similarity=0.299 Sum_probs=178.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-eEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-MKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~~v 79 (340)
|||+.+++.+..+. +|...+.+++|+ +. +|++|+.|+.+++||..... .+..+.+ |...+..+
T Consensus 173 iWd~~~~~~~~~~~----~h~~~v~~~s~~--~~---------~l~sgs~d~~i~~~d~~~~~~~~~~~~~-h~~~~~~~ 236 (420)
T 4gga_A 173 LWDVQQQKRLRNMT----SHSARVGSLSWN--SY---------ILSSGSRSGHIHHHDVRVAEHHVATLSG-HSQEVCGL 236 (420)
T ss_dssp EEETTTTEEEEEEC----CCSSCEEEEEEE--TT---------EEEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEE
T ss_pred EEEcCCCcEEEEEe----CCCCceEEEeeC--CC---------EEEEEeCCCceeEeeecccceeeEEecc-cccceeee
Confidence 69999999998887 899999998775 67 89999999999999988654 4566777 99999999
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCe----EEEEeecCCCCeeEEEEccCCC-EEEEe----cCcEEEEECCCCceeEE
Q 036605 80 AFAKKGRSLHVVGTNGMASEMKSEMGE----VIREFKASEKPISSSAFLCEEK-IFALA----SSEVRILSLENGEEVLK 150 (340)
Q Consensus 80 ~~~~~~~~l~s~~~dg~i~~wd~~~~~----~~~~~~~~~~~i~~l~~~~~~~-~l~~~----~~~i~i~d~~~~~~~~~ 150 (340)
.|+|++..+++++.|+.|++|+..+++ .+.....|...|.+++|+|.+. +++++ ++.|++||+.+++.+..
T Consensus 237 ~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 237 RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred eecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 999999999999999999999998765 3455677888999999999765 44543 24499999999988887
Q ss_pred eecCCCCeEEEEECCCCCEEEEEE-cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCc
Q 036605 151 FSDDVGPLQYVSASDGAKIIITAG-YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGV 229 (340)
Q Consensus 151 ~~~~~~~v~~~~~s~~~~~l~s~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~ 229 (340)
+..| ..+.++.|++++..+++++ ..|+.|+|||+ .+++....+. +|...+..+ .| +|+|.+|++|+.||.
T Consensus 317 ~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~--~~~~~v~~l~---gH~~~V~~l--~~-spdg~~l~S~s~D~t 387 (420)
T 4gga_A 317 VDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKY--PTMAKVAELK---GHTSRVLSL--TM-SPDGATVASAAADET 387 (420)
T ss_dssp EECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEET--TTCCEEEEEC---CCSSCEEEE--EE-CTTSSCEEEEETTTE
T ss_pred eccc-cceeeeeecCCCCeEEEEEecCCCEEEEEEC--CCCcEEEEEc---CCCCCEEEE--EE-cCCCCEEEEEecCCe
Confidence 7754 5788999999999988865 34899999999 4555554444 788777777 67 899999999999999
Q ss_pred EEEEECCCCCc
Q 036605 230 AYSWDLKTVSQ 240 (340)
Q Consensus 230 i~vwd~~~~~~ 240 (340)
|+|||+.....
T Consensus 388 vriWdv~~~~~ 398 (420)
T 4gga_A 388 LRLWRCFELDP 398 (420)
T ss_dssp EEEECCSCSSC
T ss_pred EEEEECCCCCc
Confidence 99999876443
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.3e-26 Score=202.88 Aligned_cols=207 Identities=8% Similarity=0.019 Sum_probs=158.1
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCC-----Ce
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPG-----GL 76 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~-----~v 76 (340)
|+..+++....+. ..|...|.+++|||+|+ +||+++.||.|++||.+. .+..+. |.. .|
T Consensus 69 ~~~~~~~~~~~~~---~~~~~~V~~vawSPdG~---------~LAs~s~dg~V~iwd~~~--~l~~l~--~~~~~~~~sv 132 (588)
T 2j04_A 69 LDFELAQQNGLLN---SQPVCYPRVCKPSPIDD---------WMAVLSNNGNVSVFKDNK--MLTNLD--SKGNLSSRTY 132 (588)
T ss_dssp TTTSCCCSSCSST---TSCSCCEEEEEECSSSS---------CEEEEETTSCEEEEETTE--EEEECC--CSSCSTTTCE
T ss_pred EEEEeCCCceEee---cCCCCcEEEEEECCCCC---------EEEEEeCCCcEEEEeCCc--eeeecc--CCCccccccE
Confidence 5666555333333 24578999999999999 899999999999999544 555555 443 59
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCe-------EEEEe----ecCCCCeeEEEEccCCCEEEE-ecCcEEEEECCC
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGE-------VIREF----KASEKPISSSAFLCEEKIFAL-ASSEVRILSLEN 144 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~-------~~~~~----~~~~~~i~~l~~~~~~~~l~~-~~~~i~i~d~~~ 144 (340)
.+++|+|||++|++|+.||.|++||+.++. .+..+ .+|...|.+++|+|+| ++++ .|+.|++||+.+
T Consensus 133 ~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCS
T ss_pred EEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCC
Confidence 999999999999999999999999999875 35665 5667899999999999 4444 344499999988
Q ss_pred Cce---eEEe-ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCE
Q 036605 145 GEE---VLKF-SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTV 220 (340)
Q Consensus 145 ~~~---~~~~-~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (340)
+.. ...+ .+|...|.+++|+ +.+|+++ . ++.|++||+ ..++.. .+..+|...+.++... .++++..
T Consensus 212 ~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa-~-~~tIkLWd~--~~~~~~---~~~~gh~~~V~~va~~-~s~d~~~ 281 (588)
T 2j04_A 212 SSHQPVSRMIQNASRRKITDLKIV--DYKVVLT-C-PGYVHKIDL--KNYSIS---SLKTGSLENFHIIPLN-HEKESTI 281 (588)
T ss_dssp SSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE-C-SSEEEEEET--TTTEEE---EEECSCCSCCCEEEET-TCSSCEE
T ss_pred CccccceeeecccccCcEEEEEEE--CCEEEEE-e-CCeEEEEEC--CCCeEE---EEEcCCCceEEEEEee-eCCCCCE
Confidence 763 3456 4788899999999 5788875 4 699999998 333221 2233666666665222 2689999
Q ss_pred EEEEeCCCcEEEEECC
Q 036605 221 ILAVAESGVAYSWDLK 236 (340)
Q Consensus 221 l~~~s~dg~i~vwd~~ 236 (340)
+++++.||. ++|...
T Consensus 282 La~a~edG~-klw~~d 296 (588)
T 2j04_A 282 LLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEECSSCEE-EEEESS
T ss_pred EEEEcCCCC-EEEeec
Confidence 999999999 999986
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=4.2e-26 Score=196.34 Aligned_cols=218 Identities=13% Similarity=0.078 Sum_probs=168.2
Q ss_pred CccCCCCc---eeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEc-cCCeeEEEecC-CCCCC
Q 036605 1 IWSTNDGS---LLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDV-LTGEMKWKSTG-RHPGG 75 (340)
Q Consensus 1 vwd~~~g~---~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~-~~~~~~~~~~~-~h~~~ 75 (340)
|||+.++. ....+. .|...|++++|+|+++ .+|++|+.||.|++||+ .+++. ..+.. .|...
T Consensus 37 iw~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~--------~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~ 103 (342)
T 1yfq_A 37 VYKFDIQAKNVDLLQSL----RYKHPLLCCNFIDNTD--------LQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLG 103 (342)
T ss_dssp EEEEETTTTEEEEEEEE----ECSSCEEEEEEEESSS--------EEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSC
T ss_pred EEEeCCCCccccceeee----ecCCceEEEEECCCCC--------cEEEEEcCCCeEEEEEeccCCce-EeccccCCCCc
Confidence 58887776 223333 5889999999999874 15899999999999999 88764 34432 28899
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCC---------CeEEEEeecCCCCeeEEEEccCCCEEEE--ecCcEEEEECCC
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEM---------GEVIREFKASEKPISSSAFLCEEKIFAL--ASSEVRILSLEN 144 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~~~~~~~~~~~i~~l~~~~~~~~l~~--~~~~i~i~d~~~ 144 (340)
|.+++|+| +..|++++.|+.|++||+.+ ++.+..+. +...+.+++|+|++ +++ .++.|++||+++
T Consensus 104 v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 104 ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSC
T ss_pred eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCc
Confidence 99999999 99999999999999999987 66666665 78899999999998 444 445599999998
Q ss_pred -Cce--eEEeecCCCCeEEEEECC-CCCEEEEEEcCCCeEEEEEccCCC----CCccCCceeeecCCC---------eee
Q 036605 145 -GEE--VLKFSDDVGPLQYVSASD-GAKIIITAGYGEKHLQVWRCDISS----KTVNKGPALSMRHSP---------VAI 207 (340)
Q Consensus 145 -~~~--~~~~~~~~~~v~~~~~s~-~~~~l~s~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~---------~~~ 207 (340)
+.. ......|...+.+++|+| ++.++++++. |+.|++|+++... ......+. .|.. .+.
T Consensus 180 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~ 255 (342)
T 1yfq_A 180 CEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFR---CHRLNLKDTNLAYPVN 255 (342)
T ss_dssp CTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEE---CCCCCTTCCSSCCCEE
T ss_pred cccccceeeecCCCCceeEEEECCCCCCEEEEEec-CCcEEEEEEcCCCcccccccceeee---cccccccccccceeEE
Confidence 543 234456888999999999 9999999888 9999999995320 12211221 3322 444
Q ss_pred eeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 208 DCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 208 ~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+ .| +|++.+|++++.||.|++||+.+++.+.
T Consensus 256 ~~--~~-s~~~~~l~~~~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 256 SI--EF-SPRHKFLYTAGSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp EE--EE-CTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred EE--EE-cCCCCEEEEecCCceEEEEcCccHhHhh
Confidence 44 55 7899999999999999999998776554
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=3.8e-25 Score=190.18 Aligned_cols=171 Identities=16% Similarity=0.275 Sum_probs=146.0
Q ss_pred CccCCCC----ceeeeeeCCCCCCCCCeEEEEeec--cccccccccCceEEEEEcCCCcEEEEEccCC---------eeE
Q 036605 1 IWSTNDG----SLLAEWKQPDGEPVVSYSCLACGF--VGKKRRKERGTLLLALGTSNGDILAVDVLTG---------EMK 65 (340)
Q Consensus 1 vwd~~~g----~~~~~~~~~~~~~~~~v~~l~~sp--~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~---------~~~ 65 (340)
|||+.++ +....+. +|...|++++|+| +++ +|++|+.||.|++||+.++ +..
T Consensus 37 iw~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~d~~---------~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 103 (351)
T 3f3f_A 37 VFKLDKDTSNWELSDSWR----AHDSSIVAIDWASPEYGR---------IIASASYDKTVKLWEEDPDQEECSGRRWNKL 103 (351)
T ss_dssp EEEECSSSCCEEEEEEEE----CCSSCEEEEEECCGGGCS---------EEEEEETTSCEEEEEECTTSCTTSSCSEEEE
T ss_pred EEECCCCCCcceecceec----cCCCcEEEEEEcCCCCCC---------EEEEEcCCCeEEEEecCCCcccccccCccee
Confidence 5888766 3555666 7999999999999 578 8999999999999999887 556
Q ss_pred EEecCCCCCCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCe-------------------------------------
Q 036605 66 WKSTGRHPGGLAGLAFAKK--GRSLHVVGTNGMASEMKSEMGE------------------------------------- 106 (340)
Q Consensus 66 ~~~~~~h~~~v~~v~~~~~--~~~l~s~~~dg~i~~wd~~~~~------------------------------------- 106 (340)
..+.. |.+.|.+++|+|+ +.+|++++.||.|++||+.+++
T Consensus 104 ~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 104 CTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp EEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred eeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC
Confidence 67777 9999999999999 9999999999999999986543
Q ss_pred -----------------------EEEEeecCCCCeeEEEEccCC----CEEEEecCc--EEEEECCCC------------
Q 036605 107 -----------------------VIREFKASEKPISSSAFLCEE----KIFALASSE--VRILSLENG------------ 145 (340)
Q Consensus 107 -----------------------~~~~~~~~~~~i~~l~~~~~~----~~l~~~~~~--i~i~d~~~~------------ 145 (340)
.+..+..|...|.+++|+|++ .+|++++.+ |++||+..+
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 262 (351)
T 3f3f_A 183 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTN 262 (351)
T ss_dssp CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------
T ss_pred cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccc
Confidence 134455788899999999998 788886554 999999874
Q ss_pred ----------------------------------ceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 146 ----------------------------------EEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 146 ----------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
+.+..+.+|...|.+++|+|++++|++++. |+.|++|++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~v~iw~~~ 336 (351)
T 3f3f_A 263 SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGD-DGKVRLWKAT 336 (351)
T ss_dssp ----------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEET-TSCEEEEEEC
T ss_pred eeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecC-CCcEEEEecC
Confidence 456777889999999999999999999888 9999999993
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=5.5e-25 Score=193.41 Aligned_cols=194 Identities=11% Similarity=0.015 Sum_probs=140.5
Q ss_pred EEEEEcCCCcEEEEEccCCeeEE-----EecCCCCCCeEEEEEec--------CCCEEEEEeCCCcEEEEeCCCCeEEEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKW-----KSTGRHPGGLAGLAFAK--------KGRSLHVVGTNGMASEMKSEMGEVIRE 110 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~-----~~~~~h~~~v~~v~~~~--------~~~~l~s~~~dg~i~~wd~~~~~~~~~ 110 (340)
+|++|+.|++|++||+.+++... .+.+ |.+.|++++|+| |+++|++++.|++|++||+.++..+..
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~g-H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSG-HHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTS-CSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCC-CCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 89999999999999999886432 2455 999999999998 789999999999999999998888888
Q ss_pred eecCCCCeeEEEEccCCC-EEEEecCc--EEEEECCCCceeEEe-------------------------ecCCCCeEEEE
Q 036605 111 FKASEKPISSSAFLCEEK-IFALASSE--VRILSLENGEEVLKF-------------------------SDDVGPLQYVS 162 (340)
Q Consensus 111 ~~~~~~~i~~l~~~~~~~-~l~~~~~~--i~i~d~~~~~~~~~~-------------------------~~~~~~v~~~~ 162 (340)
+..|..++.+++|+|++. +|++++.+ |++||+.+++..... .+|...+.++.
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 888999999999999875 67775544 999999887543221 35667788888
Q ss_pred EC-CCCCEEEEEEcCCCeEEEEEccCCCCCccCCcee---------------eecCCCeeeeeecCCCCCCCCEEEEEeC
Q 036605 163 AS-DGAKIIITAGYGEKHLQVWRCDISSKTVNKGPAL---------------SMRHSPVAIDCKNSPNGEDGTVILAVAE 226 (340)
Q Consensus 163 ~s-~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~l~~~s~ 226 (340)
|+ +++..|++++. |+.+++||+. .+.....+.. ........... +.+...++.++++|+.
T Consensus 262 ~~~~dg~~l~s~s~-d~~i~vwd~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 262 WIGSDGSGILAMCK-SGAWLRWNLF--ANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA-CPHPRYMDYFATAHSQ 337 (393)
T ss_dssp EETTTTCEEEEECT-TSEEEEEEC---------------------CCSCSEEEECSSCCSSCC-EECSSCTTEEEEEETT
T ss_pred eecCCCCEEEEEeC-CCCEEEEECc--cCCCCceEeeecCccccEEEccccccccccCcceeE-EEccCCCCEEEEEECC
Confidence 85 89999999777 9999999984 2221111110 00000011111 0121346667888999
Q ss_pred CCcEEEEECCCCCccC
Q 036605 227 SGVAYSWDLKTVSQDE 242 (340)
Q Consensus 227 dg~i~vwd~~~~~~~~ 242 (340)
||.|++||+.+++...
T Consensus 338 Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNS 353 (393)
T ss_dssp TTEEEEEETTCTTCCE
T ss_pred CCEEEEEECCCCcEEE
Confidence 9999999998775543
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.2e-25 Score=200.12 Aligned_cols=197 Identities=11% Similarity=0.002 Sum_probs=149.6
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-----------------------------eEEEec
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-----------------------------MKWKST 69 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-----------------------------~~~~~~ 69 (340)
.....|.+++|||||+ ++|+++.|++|+ |...++ ....+.
T Consensus 13 ~~~~~v~sv~~SpDG~---------~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~ 81 (588)
T 2j04_A 13 EFEDWKNNLTWARDGT---------LYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLN 81 (588)
T ss_dssp CCSSSSCCEEECTTSC---------EEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSST
T ss_pred HhhccEEEEEECCCCC---------EEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEee
Confidence 4568899999999999 999999999995 433332 111222
Q ss_pred CCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCC-----CeeEEEEccCCCEEEEecCc--EEEEEC
Q 036605 70 GRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEK-----PISSSAFLCEEKIFALASSE--VRILSL 142 (340)
Q Consensus 70 ~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~-----~i~~l~~~~~~~~l~~~~~~--i~i~d~ 142 (340)
..|...|.+++|+|+|..|++++.||.|++||... .+..+. |.. .+.+++|||||++|++++.+ |++||+
T Consensus 82 ~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 82 SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 13678899999999999999999999999999654 566666 655 49999999999999997655 999999
Q ss_pred CCCce-------eEEe----ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCC-ceeeecCCCeeeeee
Q 036605 143 ENGEE-------VLKF----SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKG-PALSMRHSPVAIDCK 210 (340)
Q Consensus 143 ~~~~~-------~~~~----~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~ 210 (340)
.++.. +..+ .+|...|.+++|+|+| +++++. |+.|++||+. .+..... ..+...|...+..+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~-D~tVrlWd~~--~~~~~~~~~tL~~~h~~~V~sv- 232 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS-NNSVFSMTVS--ASSHQPVSRMIQNASRRKITDL- 232 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET-TCCEEEECCC--SSSSCCCEEEEECCCSSCCCCE-
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC-CCeEEEEECC--CCccccceeeecccccCcEEEE-
Confidence 98853 4665 6677899999999999 777677 9999999983 3332110 11211455556665
Q ss_pred cCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 211 NSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 211 ~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
.| + +..|++++ +|.|++||+.+.+.
T Consensus 233 -aF-s--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 233 -KI-V--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp -EE-E--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred -EE-E--CCEEEEEe-CCeEEEEECCCCeE
Confidence 55 4 57888887 69999999987654
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=9.8e-24 Score=179.57 Aligned_cols=149 Identities=12% Similarity=0.164 Sum_probs=127.8
Q ss_pred eEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q 036605 24 YSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNGMASEMKS 102 (340)
Q Consensus 24 v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~ 102 (340)
+++|+||+++ +||+|. |++|+|||+.+++.+..+.. .|...|++++|+|++++|++|+.||.|++||+
T Consensus 28 ~~~l~WS~~~----------~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 28 LNLVDWSSGN----------VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96 (318)
T ss_dssp CBCEEECTTS----------EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEECCCC----------EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeec
Confidence 5789999864 478775 89999999999998776643 38889999999999999999999999999999
Q ss_pred CCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCc-eeEEeecCCCCeEEEEECCCCCEEEEEEcCCCe
Q 036605 103 EMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGE-EVLKFSDDVGPLQYVSASDGAKIIITAGYGEKH 179 (340)
Q Consensus 103 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~ 179 (340)
.+++.+..+.+|...+.++. +++..+++++.+ +++|+..... .+..+.+|...+..+.+++++.++++++. |+.
T Consensus 97 ~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~~ 173 (318)
T 4ggc_A 97 QQQKRLRNMTSHSARVGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN-DNL 173 (318)
T ss_dssp TTTEEEEEEECCSSCEEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-TSC
T ss_pred CCceeEEEecCccceEEEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec-Ccc
Confidence 99999999999988777655 556788776555 8899987664 45677899999999999999999999888 999
Q ss_pred EEEEEcc
Q 036605 180 LQVWRCD 186 (340)
Q Consensus 180 i~iwd~~ 186 (340)
|++||++
T Consensus 174 i~iwd~~ 180 (318)
T 4ggc_A 174 VNVWPSA 180 (318)
T ss_dssp EEEEESS
T ss_pred eeEEECC
Confidence 9999984
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=8.2e-24 Score=185.59 Aligned_cols=215 Identities=11% Similarity=0.081 Sum_probs=170.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEE-EEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLL-ALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v 79 (340)
|||+.+++++..+. +| ..+.+++|+|+++ +| ++++.|+.|++||+.+++....+.. +. .+.++
T Consensus 16 v~d~~~~~~~~~~~----~~-~~~~~~~~s~dg~---------~l~~~~~~d~~i~v~d~~~~~~~~~~~~-~~-~v~~~ 79 (391)
T 1l0q_A 16 VIDVTSNKVTATIP----VG-SNPMGAVISPDGT---------KVYVANAHSNDVSIIDTATNNVIATVPA-GS-SPQGV 79 (391)
T ss_dssp EEETTTTEEEEEEE----CS-SSEEEEEECTTSS---------EEEEEEGGGTEEEEEETTTTEEEEEEEC-SS-SEEEE
T ss_pred EEECCCCeEEEEee----cC-CCcceEEECCCCC---------EEEEECCCCCeEEEEECCCCeEEEEEEC-CC-Cccce
Confidence 69999999988887 44 4589999999997 55 6778999999999999998888875 43 89999
Q ss_pred EEecCCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEE-EEec--CcEEEEECCCCceeEEeecCC
Q 036605 80 AFAKKGRSLHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIF-ALAS--SEVRILSLENGEEVLKFSDDV 155 (340)
Q Consensus 80 ~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~--~~i~i~d~~~~~~~~~~~~~~ 155 (340)
+|+|+++.|+.++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ +++. +.|++||+.+++.+..+..+
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~- 157 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG- 157 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-
Confidence 9999999886555 6699999999999988777654 468999999999987 4543 44999999999888877765
Q ss_pred CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEe---CCCcEEE
Q 036605 156 GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVA---ESGVAYS 232 (340)
Q Consensus 156 ~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s---~dg~i~v 232 (340)
..+..++|+|++++++.++..++.|++||++ +++.... +.+......+ .+ ++++.++++++ .++.|++
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~--~~~~~~~----~~~~~~~~~~--~~-~~~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTV--TNSVIDT----VKVEAAPSGI--AV-NPEGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETT--TTEEEEE----EECSSEEEEE--EE-CTTSSEEEEEEECSSCCEEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECC--CCeEEEE----EecCCCccce--EE-CCCCCEEEEEecCcCCCcEEE
Confidence 4569999999999986666668999999983 4332221 1233334443 45 78999998888 6899999
Q ss_pred EECCCCCccC
Q 036605 233 WDLKTVSQDE 242 (340)
Q Consensus 233 wd~~~~~~~~ 242 (340)
||+.+++.+.
T Consensus 229 ~d~~~~~~~~ 238 (391)
T 1l0q_A 229 IDTGTNKITA 238 (391)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9998765443
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.8e-24 Score=187.54 Aligned_cols=221 Identities=10% Similarity=0.039 Sum_probs=163.2
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEE-EEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLL-ALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v 79 (340)
|||+.+++...... . ..+..++|.+++. ++ ++|+.|++|++||..+++.+..+. |...|.++
T Consensus 44 iw~~~~~~~~~~~~----~--~~~~~~~~~~~~~---------~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v 106 (355)
T 3vu4_A 44 IYNVHPVAHIMSQE----M--RHLSKVRMLHRTN---------YVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDL 106 (355)
T ss_dssp EEEETTEEEEEEEE----C--SCCCEEEECTTSS---------EEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEE
T ss_pred EEecCCcceeeeee----c--CCeEEEEEcCCCC---------EEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEE
Confidence 57777766554433 1 2477788888876 55 568888999999999999888876 66689999
Q ss_pred EEecCC-----------------------------------CEEEE--EeCCCcEEEEeCCCCe---------------E
Q 036605 80 AFAKKG-----------------------------------RSLHV--VGTNGMASEMKSEMGE---------------V 107 (340)
Q Consensus 80 ~~~~~~-----------------------------------~~l~s--~~~dg~i~~wd~~~~~---------------~ 107 (340)
+|+++. ..+++ ++.||.|++||+.++. +
T Consensus 107 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p 186 (355)
T 3vu4_A 107 FLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILG 186 (355)
T ss_dssp EECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------
T ss_pred EEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCc
Confidence 888652 23343 4678999999998765 1
Q ss_pred -EEEeecCCCCeeEEEEccCCCEEEEe--cCc-EEEEECCCCceeEEee-c-CCCCeEEEEECCCCCEEEEEEcCCCeEE
Q 036605 108 -IREFKASEKPISSSAFLCEEKIFALA--SSE-VRILSLENGEEVLKFS-D-DVGPLQYVSASDGAKIIITAGYGEKHLQ 181 (340)
Q Consensus 108 -~~~~~~~~~~i~~l~~~~~~~~l~~~--~~~-i~i~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~~d~~i~ 181 (340)
+..+.+|...|.+++|+|++.+|+++ ++. |++||+.+++.+..+. + |...|.+++|+|++++|++++. |+.|+
T Consensus 187 ~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~-d~~v~ 265 (355)
T 3vu4_A 187 KGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD-KWTLH 265 (355)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET-TCEEE
T ss_pred ccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC-CCEEE
Confidence 56788999999999999999999885 555 9999999999999998 5 9999999999999999999888 99999
Q ss_pred EEEccCCCCCccCCc----------------eeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 182 VWRCDISSKTVNKGP----------------ALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 182 iwd~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
+||++.........+ .+.+..........++| ++++.+|++++.||.+++|++..+..
T Consensus 266 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 266 VFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW-ISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE-SSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred EEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE-eCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 999953221111000 00001000000011245 88999999999999999999876543
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=7.2e-25 Score=183.64 Aligned_cols=155 Identities=11% Similarity=0.019 Sum_probs=117.3
Q ss_pred CCCCCeEEEEeec---cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCC--CCCeEEEEEecCCCEE-----
Q 036605 19 EPVVSYSCLACGF---VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRH--PGGLAGLAFAKKGRSL----- 88 (340)
Q Consensus 19 ~~~~~v~~l~~sp---~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l----- 88 (340)
.|...++.++|+| ++. +|++|+.|++|+|||+.+|+.++++.+.| ...+.+++|+|+|..+
T Consensus 176 ~~~~~v~~l~fs~~~g~~~---------~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQE---------ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp ECCCSSCEEEEEEEETSTT---------EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred cCCCceeeEEeeccCCCCc---------eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Confidence 4444555555555 334 89999999999999999999999997622 3467888999999876
Q ss_pred -------EEEeCCCcEEEEeCCCCeEEEEe-----ecCCCCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeecC
Q 036605 89 -------HVVGTNGMASEMKSEMGEVIREF-----KASEKPISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSDD 154 (340)
Q Consensus 89 -------~s~~~dg~i~~wd~~~~~~~~~~-----~~~~~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~~ 154 (340)
++|+.|++|++||..+++.+..+ .+|...+.+ .+.++.+++++ +++|+|||+.+++.+..+.+|
T Consensus 247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ls--g~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH 324 (356)
T 2w18_A 247 PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLE--GDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPV 324 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEE--EEEETTEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEc--cccCCCEEEEEcCCCcEEEEECCCCcEEEEecCC
Confidence 56788999999999999887654 244444333 33347788875 555999999999999999988
Q ss_pred CCCeE-EEEECCCCCEEEEEEcCCCeEEEEEc
Q 036605 155 VGPLQ-YVSASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 155 ~~~v~-~~~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
...+. .++|+|||++|++++. |++|+|||+
T Consensus 325 ~~~vvs~vafSPDG~~LaSGS~-D~TIklWd~ 355 (356)
T 2w18_A 325 SDQHWSFVKWSGTDSHLLAGQK-DGNIFVYHY 355 (356)
T ss_dssp --CCCCEEEECSSSSEEEEECT-TSCEEEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEEC-CCcEEEecC
Confidence 87655 6899999999999887 999999996
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=5.2e-24 Score=189.40 Aligned_cols=221 Identities=12% Similarity=0.037 Sum_probs=174.1
Q ss_pred CccCCCCceeeeeeCC-CCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQP-DGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~-~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v 79 (340)
+||+.+|+........ ..+|...|.+++|+|+++ ++++++.|+.|++||+.+++....+.. |...+.++
T Consensus 148 ~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~ 217 (433)
T 3bws_A 148 VLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE---------LWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKIL 217 (433)
T ss_dssp EEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE---------EEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEE
T ss_pred EEECCCCeEeeecCcccccccCCceeEEEEcCCCE---------EEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEE
Confidence 5899988877632210 016788999999999999 999999999999999999998888887 88999999
Q ss_pred EEecCCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----------CcEEEEECCCCcee
Q 036605 80 AFAKKGRSLHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----------SEVRILSLENGEEV 148 (340)
Q Consensus 80 ~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----------~~i~i~d~~~~~~~ 148 (340)
+|+|+++.+++++ .|+.|++||+.+++.+..+..+ ..+.+++|+|+++.+++++ +.|++||+.+++.+
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence 9999999886555 7899999999999988777654 4589999999999887754 35999999998766
Q ss_pred EEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeC--
Q 036605 149 LKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAE-- 226 (340)
Q Consensus 149 ~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~-- 226 (340)
..+ .|...+..++|+|++++++.++..++.|.+||+ .+++....+ .+...+..+ .+ ++++.++++++.
T Consensus 297 ~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~--~~~~~~~~~----~~~~~~~~~--~~-s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 297 DTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL--KEKKVQKSI----PVFDKPNTI--AL-SPDGKYLYVSCRGP 366 (433)
T ss_dssp EEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEET--TTTEEEEEE----ECSSSEEEE--EE-CTTSSEEEEEECCC
T ss_pred eec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEEC--CCCcEEEEe----cCCCCCCeE--EE-cCCCCEEEEEecCC
Confidence 555 355688999999999888776666999999998 344332211 233333333 45 789998888876
Q ss_pred -------------CCcEEEEECCCCCccC
Q 036605 227 -------------SGVAYSWDLKTVSQDE 242 (340)
Q Consensus 227 -------------dg~i~vwd~~~~~~~~ 242 (340)
||.|++||+.+++.+.
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred CccccccccccccceEEEEEECCCCcEEE
Confidence 5799999998765544
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=2.3e-23 Score=182.69 Aligned_cols=215 Identities=11% Similarity=0.066 Sum_probs=168.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEE-EEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLL-ALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v 79 (340)
+||+.+++++..+. .+ ..+.+++|+|+++ +| ++++.++.|++||+.+++....+.. ...+.++
T Consensus 58 v~d~~~~~~~~~~~----~~-~~v~~~~~spdg~---------~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~ 121 (391)
T 1l0q_A 58 IIDTATNNVIATVP----AG-SSPQGVAVSPDGK---------QVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGL 121 (391)
T ss_dssp EEETTTTEEEEEEE----CS-SSEEEEEECTTSS---------EEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEE
T ss_pred EEECCCCeEEEEEE----CC-CCccceEECCCCC---------EEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceE
Confidence 58999999988887 33 3999999999997 66 4566779999999999998877774 4578999
Q ss_pred EEecCCCEE-EEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEE-Eec--CcEEEEECCCCceeEEeecCC
Q 036605 80 AFAKKGRSL-HVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFA-LAS--SEVRILSLENGEEVLKFSDDV 155 (340)
Q Consensus 80 ~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~--~~i~i~d~~~~~~~~~~~~~~ 155 (340)
+|+|+++.| ++++.|+.|++||+.+++.+..+..+ ..+.+++|+|+++.++ ++. +.|++||+.+++.+..+. +.
T Consensus 122 ~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~ 199 (391)
T 1l0q_A 122 ALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VE 199 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CS
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cC
Confidence 999999977 67778999999999999988887765 4569999999999884 443 349999999997776665 45
Q ss_pred CCeEEEEECCCCCEEEEEEc--CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEE-EEEeCCCcEEE
Q 036605 156 GPLQYVSASDGAKIIITAGY--GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVI-LAVAESGVAYS 232 (340)
Q Consensus 156 ~~v~~~~~s~~~~~l~s~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~s~dg~i~v 232 (340)
..+.+++|+|+++++++++. .++.|++||+ ..++....+. .+ .....+ .+ ++++.++ ++++.|+.|++
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~--~~~~~~~~~~---~~-~~~~~~--~~-s~dg~~l~~s~~~d~~v~v 270 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT--GTNKITARIP---VG-PDPAGI--AV-TPDGKKVYVALSFXNTVSV 270 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEET--TTTEEEEEEE---CC-SSEEEE--EE-CTTSSEEEEEETTTTEEEE
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEEC--CCCeEEEEEe---cC-CCccEE--EE-ccCCCEEEEEcCCCCEEEE
Confidence 67899999999999999874 4899999998 3443322222 12 222233 44 7888877 66788999999
Q ss_pred EECCCCCccC
Q 036605 233 WDLKTVSQDE 242 (340)
Q Consensus 233 wd~~~~~~~~ 242 (340)
||+.+++.+.
T Consensus 271 ~d~~~~~~~~ 280 (391)
T 1l0q_A 271 IDTATNTITA 280 (391)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCcEEE
Confidence 9999876554
No 125
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.5e-24 Score=206.38 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=142.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
|||..+++....+ .|...|++++|+| ++ +|++++.|++|++||+.+++.+..+. |.+.|++++
T Consensus 43 lw~~~~~~~~~~~-----~~~~~V~~l~fsp-g~---------~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~ 105 (902)
T 2oaj_A 43 IYGQQQVEVVIKL-----EDRSAIKEMRFVK-GI---------YLVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSID 105 (902)
T ss_dssp EECSTTCEEEEEC-----SSCCCEEEEEEET-TT---------EEEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEE
T ss_pred EEeCCCcEEEEEc-----CCCCCEEEEEEcC-CC---------EEEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEE
Confidence 5887777665443 3678999999999 88 89999999999999999999888886 678999999
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEE-----------EEeecCCCCeeEEEEccCC-CEEEEecCc--EEEEECCCCc
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVI-----------REFKASEKPISSSAFLCEE-KIFALASSE--VRILSLENGE 146 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~-----------~~~~~~~~~i~~l~~~~~~-~~l~~~~~~--i~i~d~~~~~ 146 (340)
|+|++++|++|+.||.|++||+.+++.. ..+.+|..+|.+++|+|++ ..+++++.+ | +||+++++
T Consensus 106 ~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 106 TDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp CCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc
Confidence 9999999999999999999999988753 1235688899999999964 566665444 8 99999998
Q ss_pred eeEEeecC------------------CCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 147 EVLKFSDD------------------VGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 147 ~~~~~~~~------------------~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
.+..+..| ...|.+++|+|+|.+|++++. |+.|++||++
T Consensus 185 ~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~-Dg~i~lWd~~ 241 (902)
T 2oaj_A 185 IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE-DNSLVFWDAN 241 (902)
T ss_dssp EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET-TCCEEEEETT
T ss_pred eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECC
Confidence 88888765 467999999999999999888 9999999994
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=1.7e-22 Score=179.57 Aligned_cols=211 Identities=12% Similarity=0.042 Sum_probs=167.2
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEE-EEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLL-ALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v 79 (340)
+||+.+++....+. .|...+.+++|+|+++ ++ ++++.++.|++||+.+++....+.. ...+.++
T Consensus 195 ~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~---------~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~ 259 (433)
T 3bws_A 195 VFDLKTLAYKATVD----LTGKWSKILLYDPIRD---------LVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGL 259 (433)
T ss_dssp EEETTTCCEEEEEE----CSSSSEEEEEEETTTT---------EEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEE
T ss_pred EEECCCceEEEEEc----CCCCCeeEEEEcCCCC---------EEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEE
Confidence 58999999888887 6788999999999997 56 5666899999999999988877764 4469999
Q ss_pred EEecCCCEEEEEe--------CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEE-e--cCcEEEEECCCCcee
Q 036605 80 AFAKKGRSLHVVG--------TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFAL-A--SSEVRILSLENGEEV 148 (340)
Q Consensus 80 ~~~~~~~~l~s~~--------~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~--~~~i~i~d~~~~~~~ 148 (340)
+|+|+++.|++++ .|+.|++||+.+++.+..+. +...+.+++|+|+++.+++ + ++.|++||+.+++.+
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 9999999999988 48899999999998776653 4457889999999986644 3 344999999999877
Q ss_pred EEeecCCCCeEEEEECCCCCEEEEEEcC--------------CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCC
Q 036605 149 LKFSDDVGPLQYVSASDGAKIIITAGYG--------------EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPN 214 (340)
Q Consensus 149 ~~~~~~~~~v~~~~~s~~~~~l~s~~~~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (340)
..+. +...+.+++|+|+++++++++.. ||.|++||+ .+++....+. ....+..+ .+
T Consensus 339 ~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~--~~~~~~~~~~----~~~~~~~~--~~- 408 (433)
T 3bws_A 339 KSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT--TTDTVKEFWE----AGNQPTGL--DV- 408 (433)
T ss_dssp EEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET--TTTEEEEEEE----CSSSEEEE--EE-
T ss_pred EEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC--CCCcEEEEec----CCCCCceE--EE-
Confidence 7765 66789999999999999887764 469999998 4444332222 22233333 44
Q ss_pred CCCCCEEEEEeC-CCcEEEEECCC
Q 036605 215 GEDGTVILAVAE-SGVAYSWDLKT 237 (340)
Q Consensus 215 ~~~~~~l~~~s~-dg~i~vwd~~~ 237 (340)
+|++.+|++++. |+.|++|++..
T Consensus 409 s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 409 SPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCEEEEEETTTTEEEEEEETT
T ss_pred cCCCCEEEEEECCCCeEEEEEecC
Confidence 899999988775 99999999763
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2e-22 Score=178.28 Aligned_cols=211 Identities=14% Similarity=0.137 Sum_probs=161.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCC---cEEEEEccCCeeEEEecCCCCCCeE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNG---DILAVDVLTGEMKWKSTGRHPGGLA 77 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~h~~~v~ 77 (340)
+||+..+ ....+. .|...+.+++|+|+|+ +|++++.++ .|++||+.+++.. .+.. |.+.+.
T Consensus 163 i~d~~g~-~~~~l~----~~~~~v~~~~~Spdg~---------~la~~s~~~~~~~i~~~d~~tg~~~-~l~~-~~~~~~ 226 (415)
T 2hqs_A 163 VSDYDGY-NQFVVH----RSPQPLMSPAWSPDGS---------KLAYVTFESGRSALVIQTLANGAVR-QVAS-FPRHNG 226 (415)
T ss_dssp EEETTSC-SCEEEE----EESSCEEEEEECTTSS---------EEEEEECTTSSCEEEEEETTTCCEE-EEEC-CSSCEE
T ss_pred EEcCCCC-CCEEEe----CCCCcceeeEEcCCCC---------EEEEEEecCCCcEEEEEECCCCcEE-Eeec-CCCccc
Confidence 4777643 344555 5778999999999999 899998875 9999999998765 4555 888999
Q ss_pred EEEEecCCCEEE-EEeCCCc--EEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC-----cEEEEECCCCceeE
Q 036605 78 GLAFAKKGRSLH-VVGTNGM--ASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS-----EVRILSLENGEEVL 149 (340)
Q Consensus 78 ~v~~~~~~~~l~-s~~~dg~--i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-----~i~i~d~~~~~~~~ 149 (340)
+++|+|||+.|+ +++.++. |++||+.+++. ..+..+...+.+++|+|+|+.|++++. .|++||+.+++ ..
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-~~ 304 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-PQ 304 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-CE
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-EE
Confidence 999999999877 6666654 99999998876 566777888999999999998876432 38888998875 34
Q ss_pred EeecCCCCeEEEEECCCCCEEEEEEcCC--CeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCC
Q 036605 150 KFSDDVGPLQYVSASDGAKIIITAGYGE--KHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAES 227 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s~~~~~l~s~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~d 227 (340)
.+..+...+..++|+|+|++|++++..+ ..|.+||+ .+++.. .+. .+. .+..+ .| +|+|.+|++++.+
T Consensus 305 ~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~--~~~~~~-~l~---~~~-~~~~~--~~-spdg~~l~~~s~~ 374 (415)
T 2hqs_A 305 RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL--ATGGVQ-VLS---STF-LDETP--SL-APNGTMVIYSSSQ 374 (415)
T ss_dssp ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET--TTCCEE-ECC---CSS-SCEEE--EE-CTTSSEEEEEEEE
T ss_pred EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC--CCCCEE-Eec---CCC-CcCCe--EE-cCCCCEEEEEEcC
Confidence 5556677889999999999999887632 58999998 444331 111 222 33333 55 8999999998888
Q ss_pred C---cEEEEECCCCC
Q 036605 228 G---VAYSWDLKTVS 239 (340)
Q Consensus 228 g---~i~vwd~~~~~ 239 (340)
+ .|++||+....
T Consensus 375 ~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 375 GMGSVLNLVSTDGRF 389 (415)
T ss_dssp TTEEEEEEEETTSCC
T ss_pred CCccEEEEEECCCCc
Confidence 7 79999987543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=4.1e-22 Score=176.24 Aligned_cols=214 Identities=13% Similarity=0.066 Sum_probs=161.2
Q ss_pred CccC--CCCcee--eeeeCCCCCCCCCeEEEEeecc--------------ccccccccCceEEEEEcCC------CcEEE
Q 036605 1 IWST--NDGSLL--AEWKQPDGEPVVSYSCLACGFV--------------GKKRRKERGTLLLALGTSN------GDILA 56 (340)
Q Consensus 1 vwd~--~~g~~~--~~~~~~~~~~~~~v~~l~~sp~--------------~~~~~~~~~~~~l~~g~~d------g~i~i 56 (340)
|||+ .+|+.+ ..+. +|...+.++++++. +. .++.++.+ +.|++
T Consensus 97 lwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~---------~l~~~s~~~~~~~~~~i~i 163 (415)
T 2hqs_A 97 LVDTGGAPGTVLAQNSYK----VNKQWLRYAGHTASDEVFEKLTGIKGAFRT---------RIAYVVQTNGGQFPYELRV 163 (415)
T ss_dssp EEECSSSTTCEEEEEEEE----ECGGGHHHHHHHHHHHHHHHHHSSCCCTTC---------EEEEEEECSSSSCCEEEEE
T ss_pred EEeCCCCCCCEEeeeEEE----cChhHHHHHHHHHHHHHHHHHcCCCCcCCC---------EEEEEEecCCCCccceEEE
Confidence 6999 888877 3466 67778888888752 32 35554443 79999
Q ss_pred EEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCC---cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEE-E
Q 036605 57 VDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG---MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFA-L 132 (340)
Q Consensus 57 ~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~ 132 (340)
||+..+ ....+.. |...+.+++|+|+|+.|++++.++ .|++||+.+++.. .+..+...+.+++|+|+|+.|+ +
T Consensus 164 ~d~~g~-~~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 164 SDYDGY-NQFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp EETTSC-SCEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEE
T ss_pred EcCCCC-CCEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEE
Confidence 999754 4556666 889999999999999999999875 9999999998875 4666777899999999999887 4
Q ss_pred ec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCC--eEEEEEccCCCCCccCCceeeecCCCee
Q 036605 133 AS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEK--HLQVWRCDISSKTVNKGPALSMRHSPVA 206 (340)
Q Consensus 133 ~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 206 (340)
++ ..|++||+.+++. ..+..|...+.+++|+|||++|++++..++ .|.+||+ .+++. ..+. .+...+
T Consensus 241 ~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~--~~~~~-~~l~---~~~~~~ 313 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI--NGGAP-QRIT---WEGSQN 313 (415)
T ss_dssp ECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET--TSSCC-EECC---CSSSEE
T ss_pred EecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC--CCCCE-EEEe---cCCCcc
Confidence 42 2399999998865 667778889999999999999998776455 5666676 44432 1111 233334
Q ss_pred eeeecCCCCCCCCEEEEEeCC---CcEEEEECCCCCc
Q 036605 207 IDCKNSPNGEDGTVILAVAES---GVAYSWDLKTVSQ 240 (340)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~s~d---g~i~vwd~~~~~~ 240 (340)
..+ .| +|+|.+|++++.+ +.|++||+.+++.
T Consensus 314 ~~~--~~-spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 314 QDA--DV-SSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EEE--EE-CTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred cCe--EE-CCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 333 55 8999999988865 5899999987654
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=5e-21 Score=160.67 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=155.8
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccC-CeeEEEecCCCCCCeEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLT-GEMKWKSTGRHPGGLAGL 79 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~~h~~~v~~v 79 (340)
+||+.+++..... .|...|.+++|+|+++ +|++++ ++.|++||+.+ ++....+...+...+.++
T Consensus 26 ~~d~~~~~~~~~~-----~~~~~v~~~~~spdg~---------~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 26 IFNIRTRKMRVVW-----QTPELFEAPNWSPDGK---------YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp EEETTTTEEEEEE-----EESSCCEEEEECTTSS---------EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred EEeCCCCceeeec-----cCCcceEeeEECCCCC---------EEEEEc-CCeEEEEeCCCCCCceEeccccccccccce
Confidence 5888888766443 3678999999999999 888876 88999999999 876655555234788999
Q ss_pred EEecCCCEEEEEeC--C--CcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEE-Ee--cCcEEEEEC--CCCceeEE
Q 036605 80 AFAKKGRSLHVVGT--N--GMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFA-LA--SSEVRILSL--ENGEEVLK 150 (340)
Q Consensus 80 ~~~~~~~~l~s~~~--d--g~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~--~~~i~i~d~--~~~~~~~~ 150 (340)
+|+|+++.|++++. + ..|..|+..++. ...+..+ ..+..++|+|+++.++ ++ ++.+.+|++ .++ ....
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-~~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-VETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-CEEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-cceE
Confidence 99999999999883 3 455555656555 3344433 3488999999999886 33 444777775 444 4456
Q ss_pred eecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCC---
Q 036605 151 FSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAES--- 227 (340)
Q Consensus 151 ~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~d--- 227 (340)
+..+...+.++.|+|++++|+.++..++.+.+|+++...+. ...+. .+...+..+ .| +|++.+|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~-~~~~~---~~~~~~~~~--~~-s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS-VERIT---DSAYGDWFP--HP-SPSGDKVVFVSYDADV 240 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-EEECC---CCSEEEEEE--EE-CTTSSEEEEEEEETTC
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC-cEEEe---cCCcccCCe--EE-CCCCCEEEEEEcCCCC
Confidence 67778899999999999998887755899999998533322 22221 233333333 55 8999999888876
Q ss_pred --------CcEEEEECCCCCc
Q 036605 228 --------GVAYSWDLKTVSQ 240 (340)
Q Consensus 228 --------g~i~vwd~~~~~~ 240 (340)
+.|++||+.+++.
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSC
T ss_pred CcccccCceEEEEEecCCCCc
Confidence 5699999987543
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.3e-20 Score=159.91 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=163.5
Q ss_pred CccCCCCceeeeeeCCCCCCCC-CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCC----CC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVV-SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHP----GG 75 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~-~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~----~~ 75 (340)
+||+.+++.+..+... +.. .+.+++|+|+++ .+++++..++.|.+||+.+++....+...+. ..
T Consensus 15 ~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~--------~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 15 VIDTEKMAVDKVITIA---DAGPTPMVPMVAPGGR--------IAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp EEETTTTEEEEEEECT---TCTTCCCCEEECTTSS--------EEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred EEECCCCcEEEEEEcC---CCCCCccceEEcCCCC--------EEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 5899999988877622 222 478899999996 0456667789999999999988777664231 26
Q ss_pred eEEEEEecCCCEEEEEe------------CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCcEEEEECC
Q 036605 76 LAGLAFAKKGRSLHVVG------------TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSEVRILSLE 143 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~ 143 (340)
+.+++|+|+++.|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++++.|++||+.
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~i~~~d~~ 162 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRDLHVMDPE 162 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSSEEEEETT
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeCCeEEEEECC
Confidence 77899999999999886 579999999999988777765 44678899999999888888889999998
Q ss_pred CCceeEEeecCC------------------------------------------------------------------CC
Q 036605 144 NGEEVLKFSDDV------------------------------------------------------------------GP 157 (340)
Q Consensus 144 ~~~~~~~~~~~~------------------------------------------------------------------~~ 157 (340)
+++.+..+..+. ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 887654442211 23
Q ss_pred eEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 158 LQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+..++|+|++++++++ ++.|.+||+ .+++....+ .....+... .+ ++++.+|++++.++.|++||+.+
T Consensus 243 ~~~~~~s~dg~~l~~~---~~~v~~~d~--~~~~~~~~~--~~~~~~~~~----~~-s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA---YNVLESFDL--EKNASIKRV--PLPHSYYSV----NV-STDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEEEEECTTSSEEEEE---ESEEEEEET--TTTEEEEEE--ECSSCCCEE----EE-CTTSCEEEEESBSSEEEEEETTT
T ss_pred eeeEEECCCCCEEEEe---CCeEEEEEC--CCCcCccee--cCCCceeeE----EE-CCCCCEEEEEcCCCcEEEEECcC
Confidence 4468999999998886 689999998 444332222 223333333 33 89999999999999999999988
Q ss_pred CCccC
Q 036605 238 VSQDE 242 (340)
Q Consensus 238 ~~~~~ 242 (340)
++.+.
T Consensus 311 ~~~~~ 315 (337)
T 1pby_B 311 LEKKG 315 (337)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 76554
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=4.1e-20 Score=159.49 Aligned_cols=218 Identities=11% Similarity=0.002 Sum_probs=165.6
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCC------
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPG------ 74 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~------ 74 (340)
+||+.+++....+.. ...+..++|+|+++ .+++++..++.|.+||..+++....+.. +..
T Consensus 73 ~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~--------~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~ 138 (353)
T 3vgz_A 73 RLDPVTLEVTQAIHN-----DLKPFGATINNTTQ--------TLWFGNTVNSAVTAIDAKTGEVKGRLVL-DDRKRTEEV 138 (353)
T ss_dssp EECTTTCCEEEEEEE-----SSCCCSEEEETTTT--------EEEEEETTTTEEEEEETTTCCEEEEEES-CCCCCCSSC
T ss_pred EEcCCCCeEEEEEec-----CCCcceEEECCCCC--------EEEEEecCCCEEEEEeCCCCeeEEEEec-CCCcccccc
Confidence 478888888877762 24477899999996 0444556689999999999998877765 322
Q ss_pred ---CeEEEEEecCCCEEEEEe--CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCce
Q 036605 75 ---GLAGLAFAKKGRSLHVVG--TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEE 147 (340)
Q Consensus 75 ---~v~~v~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~ 147 (340)
.+.+++|+|+++.+++++ .++.|.+||+.+++.+..+..+...+.+++|+|+++.+++++. .|.+||+.+++.
T Consensus 139 ~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 139 RPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI 218 (353)
T ss_dssp CCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred CCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence 278999999999888876 4789999999999988888755566889999999998887554 499999999988
Q ss_pred eEEeec----CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEE
Q 036605 148 VLKFSD----DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILA 223 (340)
Q Consensus 148 ~~~~~~----~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (340)
+..+.. +...+..++|+|+++++++++..++.|.+||+ .+++....+. ... +... .+ ++++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~--~~~~~~~~~~--~~~-~~~~----~~-s~dg~~l~v 288 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT--RNGNILAKVA--APE-SLAV----LF-NPARNEAYV 288 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET--TTCCEEEEEE--CSS-CCCE----EE-ETTTTEEEE
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC--CCCcEEEEEE--cCC-CceE----EE-CCCCCEEEE
Confidence 877654 45567889999999998887876799999998 4444333222 222 2222 33 788886655
Q ss_pred Ee-CCCcEEEEECCCCCccC
Q 036605 224 VA-ESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 224 ~s-~dg~i~vwd~~~~~~~~ 242 (340)
++ .++.|.+||..+++.+.
T Consensus 289 ~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 289 THRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEEEETTTTEEEE
T ss_pred EECCCCeEEEEECCCCeEEE
Confidence 55 68999999998765544
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.87 E-value=3.8e-20 Score=168.73 Aligned_cols=214 Identities=10% Similarity=0.020 Sum_probs=163.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEc--cCCeeEEEecCCCCCCeEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDV--LTGEMKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~--~~~~~~~~~~~~h~~~v~~ 78 (340)
|||..+++++..+. .++. +.+++|+|+++ +|++++.|+.|.+||+ .+++.+..+. +...+..
T Consensus 163 v~D~~t~~~~~~i~---~g~~--~~~v~~spdg~---------~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~ 226 (543)
T 1nir_A 163 LVDGDSKKIVKVID---TGYA--VHISRMSASGR---------YLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARS 226 (543)
T ss_dssp EEETTTCCEEEEEE---CSTT--EEEEEECTTSC---------EEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEE
T ss_pred EEECCCceEEEEEe---cCcc--cceEEECCCCC---------EEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcce
Confidence 58999999998887 2333 88999999999 9999999999999999 8888888887 4456899
Q ss_pred EEEec----CCCEEEEEeC-CCcEEEEeCCCCeEEEEeecC-----------CCCeeEEEEccCCCEEEEe---cCcEEE
Q 036605 79 LAFAK----KGRSLHVVGT-NGMASEMKSEMGEVIREFKAS-----------EKPISSSAFLCEEKIFALA---SSEVRI 139 (340)
Q Consensus 79 v~~~~----~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~-----------~~~i~~l~~~~~~~~l~~~---~~~i~i 139 (340)
++|+| +|++|++++. ++.|.+||..+++.+..+..+ ...+..+.++|++..+++. ++.|.+
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 99999 9999999884 899999999999988877642 2268899999988776553 344999
Q ss_pred EECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCcee-eecCCCeeeeeecCCCCC
Q 036605 140 LSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPAL-SMRHSPVAIDCKNSPNGE 216 (340)
Q Consensus 140 ~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 216 (340)
||+.+.+.+. .+ .+...+..+.|+|+|+++++++..++.|.+||+ .+++....+.. ...|+.....+ + +|
T Consensus 307 vd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~--~tg~l~~~i~~g~~ph~g~g~~~---~-~p 379 (543)
T 1nir_A 307 VNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDS--KDRRLSALVDVGKTPHPGRGANF---V-HP 379 (543)
T ss_dssp EECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEET--TTTEEEEEEECSSSBCCTTCEEE---E-ET
T ss_pred EEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEEC--CCCeEEEeeccCCCCCCCCCccc---C-CC
Confidence 9998876543 33 355678899999999999888877899999998 45544332221 01233222222 1 45
Q ss_pred C-CCEEEEEe-CCCcEEEEECCC
Q 036605 217 D-GTVILAVA-ESGVAYSWDLKT 237 (340)
Q Consensus 217 ~-~~~l~~~s-~dg~i~vwd~~~ 237 (340)
+ +..++++. .|+.|.+||+.+
T Consensus 380 ~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 380 KYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCccEEEeccCCCceEEEEEeCC
Confidence 5 55666665 589999999987
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.1e-19 Score=155.61 Aligned_cols=217 Identities=9% Similarity=0.021 Sum_probs=156.8
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcC-CCcEEEEEccCCee-EEEecCCCCCCeEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTS-NGDILAVDVLTGEM-KWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~-dg~i~i~d~~~~~~-~~~~~~~h~~~v~~ 78 (340)
+||+.++++...+. .+...+ +++|+|+++ ++++++. ++.|.+||+.+++. ...+.. +.....+
T Consensus 24 ~~d~~~~~~~~~~~----~~~~~~-~~~~s~dg~---------~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~ 88 (331)
T 3u4y_A 24 FFSTDTLEILNQIT----LGYDFV-DTAITSDCS---------NVVVTSDFCQTLVQIETQLEPPKVVAIQE-GQSSMAD 88 (331)
T ss_dssp EEETTTCCEEEEEE----CCCCEE-EEEECSSSC---------EEEEEESTTCEEEEEECSSSSCEEEEEEE-CSSCCCC
T ss_pred EEeCcccceeeeEE----ccCCcc-eEEEcCCCC---------EEEEEeCCCCeEEEEECCCCceeEEeccc-CCCCccc
Confidence 58999999887776 334555 999999997 5665554 89999999999987 666665 5555555
Q ss_pred EEEecCCCEEEEEeCCC---cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEe---cCc-EEEEECCCCcee---
Q 036605 79 LAFAKKGRSLHVVGTNG---MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALA---SSE-VRILSLENGEEV--- 148 (340)
Q Consensus 79 v~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~---~~~-i~i~d~~~~~~~--- 148 (340)
++|+|++++|+++..++ .|.+||+.+++.+..+..+ ....+++|+|+|++++++ ++. |.+|++.....+
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 99999999999554443 8999999999988777654 456899999999866553 255 999998764333
Q ss_pred -EEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccC-CceeeecCCCeeeeeecCCCCCCCCEEEEEe-
Q 036605 149 -LKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNK-GPALSMRHSPVAIDCKNSPNGEDGTVILAVA- 225 (340)
Q Consensus 149 -~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s- 225 (340)
.........+..++|+|+|++++.++..++.|.+||+ .+++... ...+.....+..+. + +|+|.++++++
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~--~~~~~~~~~~~~~~~~~~~~~~----~-spdg~~l~v~~~ 240 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET--QNPENITLLNAVGTNNLPGTIV----V-SRDGSTVYVLTE 240 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC--SSTTSCEEEEEEECSSCCCCEE----E-CTTSSEEEEECS
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC--CCCcccceeeeccCCCCCceEE----E-CCCCCEEEEEEc
Confidence 1222334567899999999988887776899999998 4444311 11222222223333 3 89999776665
Q ss_pred CCCcEEEEECCCCCc
Q 036605 226 ESGVAYSWDLKTVSQ 240 (340)
Q Consensus 226 ~dg~i~vwd~~~~~~ 240 (340)
.++.|.+||+.+++.
T Consensus 241 ~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 241 STVDVFNFNQLSGTL 255 (331)
T ss_dssp SEEEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCce
Confidence 477899999987654
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.9e-20 Score=166.17 Aligned_cols=156 Identities=12% Similarity=-0.053 Sum_probs=127.7
Q ss_pred CCCCeEEEEeeccccccccccCceEEE----EEcCCCcEEEEEccCC--------e---eEEEecCCCCCCeEEEEEecC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLA----LGTSNGDILAVDVLTG--------E---MKWKSTGRHPGGLAGLAFAKK 84 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~----~g~~dg~i~i~d~~~~--------~---~~~~~~~~h~~~v~~v~~~~~ 84 (340)
+...|++++|+|+++ +|+ +|+.|+.|++||+.++ + ....+.+ |.+.|.+++|+|+
T Consensus 91 ~~~~v~~l~~spdg~---------~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~ 160 (434)
T 2oit_A 91 MKFPIHHLALSCDNL---------TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD-AGGMVIDMKWNPT 160 (434)
T ss_dssp CSSCEEEEEECTTSC---------EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS-GGGSEEEEEECSS
T ss_pred CCCcccEEEEcCCCC---------EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCC-CCCceEEEEECCC
Confidence 456799999999998 888 7889999999998765 1 1344455 8999999999997
Q ss_pred -CCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecC-------
Q 036605 85 -GRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDD------- 154 (340)
Q Consensus 85 -~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~------- 154 (340)
+..|++++.||.|++||++++..+.....|...+.+++|+|+|++|++++.+ |++||++ ++....+..|
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTS
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCC
Confidence 7899999999999999999987776677788899999999999999886554 9999998 5555555433
Q ss_pred CCCeEEEEECCCCCEEEEEEcCCC------eEEEEEcc
Q 036605 155 VGPLQYVSASDGAKIIITAGYGEK------HLQVWRCD 186 (340)
Q Consensus 155 ~~~v~~~~~s~~~~~l~s~~~~d~------~i~iwd~~ 186 (340)
...+.++.|++++.++++.+..+| .+++|+++
T Consensus 240 ~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred ceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 237899999999888877665453 38999995
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=1.8e-19 Score=154.25 Aligned_cols=219 Identities=12% Similarity=0.075 Sum_probs=150.9
Q ss_pred CccCCCCce-eeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCC---cEEEEEccCCeeEEEecCCCCCCe
Q 036605 1 IWSTNDGSL-LAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNG---DILAVDVLTGEMKWKSTGRHPGGL 76 (340)
Q Consensus 1 vwd~~~g~~-~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~h~~~v 76 (340)
+||+.++++ ...+. .+..++.+++|+|+++ +|+++..++ .|.+||+.+++.+..+.. ....
T Consensus 66 ~~d~~~~~~~~~~~~----~~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~ 130 (331)
T 3u4y_A 66 QIETQLEPPKVVAIQ----EGQSSMADVDITPDDQ---------FAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDA 130 (331)
T ss_dssp EEECSSSSCEEEEEE----ECSSCCCCEEECTTSS---------EEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTE
T ss_pred EEECCCCceeEEecc----cCCCCccceEECCCCC---------EEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCc
Confidence 478888887 55555 4555665699999998 788655553 899999999988877764 4467
Q ss_pred EEEEEecCCCEEEEEe-CCCc-EEEEeCCCCeEE----EEeecCCCCeeEEEEccCCCEEEEe---cCcEEEEECCCCce
Q 036605 77 AGLAFAKKGRSLHVVG-TNGM-ASEMKSEMGEVI----REFKASEKPISSSAFLCEEKIFALA---SSEVRILSLENGEE 147 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~-~dg~-i~~wd~~~~~~~----~~~~~~~~~i~~l~~~~~~~~l~~~---~~~i~i~d~~~~~~ 147 (340)
.+++|+|+|++|++++ .++. |.+|++.....+ .........+..++|+|+|++++++ ++.|.+||+.+++.
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 9999999998666654 5578 999998754322 1112334567899999999976553 34499999999887
Q ss_pred ---eEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeec---CCCeeee-eecCCCCCCCCE
Q 036605 148 ---VLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMR---HSPVAID-CKNSPNGEDGTV 220 (340)
Q Consensus 148 ---~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~ 220 (340)
+..+..+ ..+..++|+|+|++++++...++.|.+||+ .+++......+... +...... -...+ +|++.+
T Consensus 211 ~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~ 286 (331)
T 3u4y_A 211 ITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ--LSGTLSFVKSFGHGLLIDPRPLFGANQMAL-NKTETK 286 (331)
T ss_dssp CEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEET--TTTEEEEEEEEECCCCCCCGGGTTCCCEEE-CTTSSE
T ss_pred cceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEEC--CCCceeeecccccccccCCCCcccccceEE-CCCCCE
Confidence 6666643 567889999999988877766889999998 44433111110000 0111000 00033 899998
Q ss_pred EEEEeC-CCcEEEEECCCC
Q 036605 221 ILAVAE-SGVAYSWDLKTV 238 (340)
Q Consensus 221 l~~~s~-dg~i~vwd~~~~ 238 (340)
|++++. ++.|.+||+...
T Consensus 287 l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 287 LFISANISRELKVFTISGK 305 (331)
T ss_dssp EEEEETTTTEEEEEETTSC
T ss_pred EEEecCCCCcEEEEEecCC
Confidence 866555 569999998753
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.85 E-value=3.7e-19 Score=162.17 Aligned_cols=196 Identities=13% Similarity=0.020 Sum_probs=155.0
Q ss_pred EeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeC--CCC
Q 036605 28 ACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKS--EMG 105 (340)
Q Consensus 28 ~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~--~~~ 105 (340)
+|+|+++ ++++++.+++|.+||..+++.+..+..++. +..++|+|+|++|++++.|+.|.+||+ .++
T Consensus 144 ~~~p~~~---------~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~ 212 (543)
T 1nir_A 144 DLDLPNL---------FSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP 212 (543)
T ss_dssp CCCGGGE---------EEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC
T ss_pred ccCCCCE---------EEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC
Confidence 4889888 899999999999999999999988885243 899999999999999999999999999 888
Q ss_pred eEEEEeecCCCCeeEEEEcc----CCCEEEEec---CcEEEEECCCCceeEEeecC----------C-CCeEEEEECCCC
Q 036605 106 EVIREFKASEKPISSSAFLC----EEKIFALAS---SEVRILSLENGEEVLKFSDD----------V-GPLQYVSASDGA 167 (340)
Q Consensus 106 ~~~~~~~~~~~~i~~l~~~~----~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~----------~-~~v~~~~~s~~~ 167 (340)
+.+..+.. ...+..++|+| +|+++++++ +.|.+||..+++.+..+..+ . ..+..+.++|++
T Consensus 213 ~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 213 TKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp EEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred cEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 88888874 45679999999 999998754 55999999999988877542 2 368899999998
Q ss_pred CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEe-CCCcEEEEECCCCCccC
Q 036605 168 KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVA-ESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 168 ~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s-~dg~i~vwd~~~~~~~~ 242 (340)
..++++...++.|.+||+. ..+...... +.+.....++ .| +|++.++++++ .++.|.+||..+++.+.
T Consensus 292 ~~~~vs~~~~g~i~vvd~~--~~~~l~~~~--i~~~~~~~~~--~~-spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYK--DIDNLTVTS--IGAAPFLHDG--GW-DSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp SEEEEEETTTTEEEEEECT--TSSSCEEEE--EECCSSCCCE--EE-CTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCeEEEEEec--CCCcceeEE--eccCcCccCc--eE-CCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 8888777779999999983 333222111 2222223333 34 89999876554 58899999999876554
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=2.3e-20 Score=165.69 Aligned_cols=202 Identities=11% Similarity=-0.019 Sum_probs=146.0
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCC----------eeEEEec----CCCCCCeEEEEEecCC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTG----------EMKWKST----GRHPGGLAGLAFAKKG 85 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~----------~~~~~~~----~~h~~~v~~v~~~~~~ 85 (340)
....++++++++++. ++++|+.+| +++|+.... ....... -.+.+.|.+++|+|++
T Consensus 35 ~~~~~n~lavs~~~~---------~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg 104 (434)
T 2oit_A 35 PKERSSLLAVSNKYG---------LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN 104 (434)
T ss_dssp CCSCCBCEEEETTTT---------EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS
T ss_pred CCCCccEEEEecCCC---------EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC
Confidence 345689999999998 899998888 889875321 0111110 0156789999999999
Q ss_pred CEEE----EEeCCCcEEEEeCCCC--------e---EEEEeecCCCCeeEEEEccC-CCEEEEec--CcEEEEECCCCce
Q 036605 86 RSLH----VVGTNGMASEMKSEMG--------E---VIREFKASEKPISSSAFLCE-EKIFALAS--SEVRILSLENGEE 147 (340)
Q Consensus 86 ~~l~----s~~~dg~i~~wd~~~~--------~---~~~~~~~~~~~i~~l~~~~~-~~~l~~~~--~~i~i~d~~~~~~ 147 (340)
++|+ +++.|+.|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++ +.|++||++++..
T Consensus 105 ~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 105 LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK 184 (434)
T ss_dssp CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence 9999 7888999999998765 2 23456678889999999998 78888754 4499999999877
Q ss_pred eEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeee----cCCCeeeeeecCCCCCCCCEEEE
Q 036605 148 VLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSM----RHSPVAIDCKNSPNGEDGTVILA 223 (340)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~ 223 (340)
+....+|...|.+++|+|+|++|++++. |+.|++||++ +.....+.... .|...+..+ .| .+++.++++
T Consensus 185 ~~~~~~~~~~v~~v~wspdg~~lasgs~-dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~v--~w-~~~~~~l~~ 257 (434)
T 2oit_A 185 VCATLPSTVAVTSVCWSPKGKQLAVGKQ-NGTVVQYLPT---LQEKKVIPCPPFYESDHPVRVLDV--LW-IGTYVFAIV 257 (434)
T ss_dssp EEEEECGGGCEEEEEECTTSSCEEEEET-TSCEEEECTT---CCEEEEECCCTTCCTTSCEEEEEE--EE-EETTEEEEE
T ss_pred eeeccCCCCceeEEEEcCCCCEEEEEcC-CCcEEEEccC---CcccccccCCcccCCCCceeEEEE--EE-ecCceEEEE
Confidence 7677778899999999999999999887 9999999984 11111111000 122244444 56 566666644
Q ss_pred -EeCCCc------EEEEECCCC
Q 036605 224 -VAESGV------AYSWDLKTV 238 (340)
Q Consensus 224 -~s~dg~------i~vwd~~~~ 238 (340)
.+.||. +++|++...
T Consensus 258 ~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 258 YAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTCCSSSCCEEEEEECCCT
T ss_pred EccCCCccCCCCceEEEEeccC
Confidence 344443 899999764
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=1.4e-19 Score=155.79 Aligned_cols=216 Identities=9% Similarity=0.080 Sum_probs=158.1
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEE-EEEcCCCcEEEEEccCCeeEEEecCCC-----CC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLL-ALGTSNGDILAVDVLTGEMKWKSTGRH-----PG 74 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~h-----~~ 74 (340)
+||+.+++.+..+.. +....+..++|+|+++ ++ +++..++.|.+||+.+++....+...+ ..
T Consensus 25 ~~d~~~~~~~~~~~~---~~~~~~~~~~~s~dg~---------~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~ 92 (349)
T 1jmx_B 25 VVDVASDTVYKSCVM---PDKFGPGTAMMAPDNR---------TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGR 92 (349)
T ss_dssp EEETTTTEEEEEEEC---SSCCSSCEEEECTTSS---------EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEE
T ss_pred EEECCCCcEEEEEec---CCCCCCceeEECCCCC---------EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccc
Confidence 589999998887762 2223578899999996 44 556678999999999998877765313 22
Q ss_pred CeEEEEEecCCCEEEEEeCC------------CcEEEEeCCCCeE---EEEeecCCCCeeEEEEccCCCEEEEecCcEEE
Q 036605 75 GLAGLAFAKKGRSLHVVGTN------------GMASEMKSEMGEV---IREFKASEKPISSSAFLCEEKIFALASSEVRI 139 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~---~~~~~~~~~~i~~l~~~~~~~~l~~~~~~i~i 139 (340)
.+.+++|+|+|++|++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+++ +++++.+|++
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~~i~~ 170 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGPDIYK 170 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESSSEEE
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccCcEEE
Confidence 37899999999999998865 8999999988543 23333 334688999999999 6667778999
Q ss_pred EECCCCceeEEeecCC----------------------------------------------------------------
Q 036605 140 LSLENGEEVLKFSDDV---------------------------------------------------------------- 155 (340)
Q Consensus 140 ~d~~~~~~~~~~~~~~---------------------------------------------------------------- 155 (340)
||+.+++.+..+..+.
T Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (349)
T 1jmx_B 171 MDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 250 (349)
T ss_dssp ECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred EeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc
Confidence 9999887766554321
Q ss_pred ----CCeEEEEECC-CCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcE
Q 036605 156 ----GPLQYVSASD-GAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVA 230 (340)
Q Consensus 156 ----~~v~~~~~s~-~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i 230 (340)
..+..++|+| ++++++++ ++.|.+||+ .+++....+ ...+.+..+. + ++++.+|++++.++.|
T Consensus 251 ~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~--~~~~~~~~~--~~~~~~~~~~----~-s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 251 ADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDL--KQRKLIKAA--NLDHTYYCVA----F-DKKGDKLYLGGTFNDL 318 (349)
T ss_dssp EECSSCEEEEEECSSCTTEEEEE---ESEEEEEET--TTTEEEEEE--ECSSCCCEEE----E-CSSSSCEEEESBSSEE
T ss_pred ccCCCcceeeEecCCCCCEEEEE---cCeEEEEEC--ccCeEEEEE--cCCCCccceE----E-CCCCCEEEEecCCCeE
Confidence 1345677789 99998886 689999998 444332222 2233333333 3 8899888888889999
Q ss_pred EEEECCCCCccC
Q 036605 231 YSWDLKTVSQDE 242 (340)
Q Consensus 231 ~vwd~~~~~~~~ 242 (340)
++||..+++.+.
T Consensus 319 ~v~d~~~~~~~~ 330 (349)
T 1jmx_B 319 AVFNPDTLEKVK 330 (349)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEeccccceee
Confidence 999998766544
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=5.2e-19 Score=151.81 Aligned_cols=202 Identities=13% Similarity=0.120 Sum_probs=141.0
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCC-CcEEEEEcc--CCe--eEEEecCCCCCCeEEEEEecCCCEEEEEeC-
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSN-GDILAVDVL--TGE--MKWKSTGRHPGGLAGLAFAKKGRSLHVVGT- 93 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d-g~i~i~d~~--~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~- 93 (340)
+...+.+++|+|+++ +|++++.+ +.|.+|++. +++ .+..+.. + +.+..++|+|+++.|++++.
T Consensus 36 ~~~~~~~~~~spdg~---------~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~ 104 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKR---------YLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P-GSLTHISTDHQGQFVFVGSYN 104 (343)
T ss_dssp CSSCCCCEEECTTSS---------EEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S-SCCSEEEECTTSSEEEEEETT
T ss_pred cCCCCceEEECCCCC---------EEEEeecCCCeEEEEEecCCCCceeecccccc-C-CCCcEEEEcCCCCEEEEEecC
Confidence 567888999999998 78887776 999999997 555 3334443 3 37899999999998877765
Q ss_pred CCcEEEEeCC---CCeEEEEeecCCCCeeEEEEccCCCEEEEec---CcEEEEECCC-CceeE----Eeec-CCCCeEEE
Q 036605 94 NGMASEMKSE---MGEVIREFKASEKPISSSAFLCEEKIFALAS---SEVRILSLEN-GEEVL----KFSD-DVGPLQYV 161 (340)
Q Consensus 94 dg~i~~wd~~---~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~-~~~~~----~~~~-~~~~v~~~ 161 (340)
++.|.+||+. ..+....+.. ...+.+++|+|+++++++++ +.|++||+.+ ++... .+.. ....+..+
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred CCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 7889999994 3344444443 34588999999999887654 4599999987 54332 2333 23578889
Q ss_pred EECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceee---ecCC--CeeeeeecCCCCCCCCEEEE-EeCCCcEEEEEC
Q 036605 162 SASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALS---MRHS--PVAIDCKNSPNGEDGTVILA-VAESGVAYSWDL 235 (340)
Q Consensus 162 ~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~l~~-~s~dg~i~vwd~ 235 (340)
+|+|+++++++++..++.|.+|+++...+......... ..+. .....+ .| ++++.+|++ ...++.|.+|++
T Consensus 184 ~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i--~~-s~dg~~l~v~~~~~~~i~v~d~ 260 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI--HI-TPDGRHLYACDRTASLITVFSV 260 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE--EE-CTTSSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce--EE-CCCCCEEEEEecCCCEEEEEEE
Confidence 99999998887776699999999853233221111110 0111 112122 44 789987774 457899999999
Q ss_pred C
Q 036605 236 K 236 (340)
Q Consensus 236 ~ 236 (340)
.
T Consensus 261 ~ 261 (343)
T 1ri6_A 261 S 261 (343)
T ss_dssp C
T ss_pred c
Confidence 7
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=1.5e-18 Score=148.89 Aligned_cols=215 Identities=14% Similarity=0.194 Sum_probs=144.2
Q ss_pred CccCC--CCcee--eeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc-CCCcEEEEEcc---CCeeEEEecCCC
Q 036605 1 IWSTN--DGSLL--AEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT-SNGDILAVDVL---TGEMKWKSTGRH 72 (340)
Q Consensus 1 vwd~~--~g~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~-~dg~i~i~d~~---~~~~~~~~~~~h 72 (340)
+|++. +|++. ..+. .+ ..+.+++|+|+++ +|++++ .++.|.+||+. .++....+..
T Consensus 64 ~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~s~dg~---------~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-- 127 (343)
T 1ri6_A 64 AYRIAPDDGALTFAAESA----LP-GSLTHISTDHQGQ---------FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-- 127 (343)
T ss_dssp EEEECTTTCCEEEEEEEE----CS-SCCSEEEECTTSS---------EEEEEETTTTEEEEEEEETTEEEEEEEEECC--
T ss_pred EEEecCCCCceeeccccc----cC-CCCcEEEEcCCCC---------EEEEEecCCCeEEEEECCCCccccccccccC--
Confidence 46665 55543 3343 22 3788999999997 666554 58899999994 3344445543
Q ss_pred CCCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC-CeEEE----Eeec-CCCCeeEEEEccCCCEEEEec---CcEEEEEC
Q 036605 73 PGGLAGLAFAKKGRSLHVVG-TNGMASEMKSEM-GEVIR----EFKA-SEKPISSSAFLCEEKIFALAS---SEVRILSL 142 (340)
Q Consensus 73 ~~~v~~v~~~~~~~~l~s~~-~dg~i~~wd~~~-~~~~~----~~~~-~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~ 142 (340)
...+.+++|+|+++.|++++ .++.|.+||+.+ ++... .+.. ....+..++|+|+++++++++ +.|.+||+
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 34689999999999888887 889999999987 65432 2222 234678899999999775533 44999999
Q ss_pred CC--Cce--eEEee---cC---CCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecC
Q 036605 143 EN--GEE--VLKFS---DD---VGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNS 212 (340)
Q Consensus 143 ~~--~~~--~~~~~---~~---~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (340)
.. ++. ...+. .. ...+..++|+|++++|+++...++.|.+||++...+.......+.....+..+ .
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~----~ 283 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGF----N 283 (343)
T ss_dssp SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCE----E
T ss_pred cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceE----E
Confidence 53 432 22222 11 23566899999999998777669999999995222221111111112222222 3
Q ss_pred CCCCCCCEEEEEe-CCCcEEEEECC
Q 036605 213 PNGEDGTVILAVA-ESGVAYSWDLK 236 (340)
Q Consensus 213 ~~~~~~~~l~~~s-~dg~i~vwd~~ 236 (340)
+ ++++.+|++++ .++.|.+|++.
T Consensus 284 ~-s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 284 V-DHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp E-CTTSSEEEEECTTTCEEEEEEEE
T ss_pred E-CCCCCEEEEecCCCCeEEEEEEc
Confidence 4 89999888887 57999999654
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=3.2e-18 Score=147.58 Aligned_cols=218 Identities=12% Similarity=0.075 Sum_probs=145.0
Q ss_pred ccCCCCceee-eeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcC--CCcEEEEEccCCe--eEEEecCCCCCCe
Q 036605 2 WSTNDGSLLA-EWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTS--NGDILAVDVLTGE--MKWKSTGRHPGGL 76 (340)
Q Consensus 2 wd~~~g~~~~-~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~--dg~i~i~d~~~~~--~~~~~~~~h~~~v 76 (340)
||..+|++.. ... .+...+..++|+|+++ +++++.. ++.|.+|++.+++ .+..+.. +...+
T Consensus 23 ~d~~tg~~~~~~~~----~~~~~p~~~a~spdg~---------l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~p 88 (347)
T 3hfq_A 23 LDTTAKTLTNDGLL----AATQNPTYLALSAKDC---------LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-PGTPP 88 (347)
T ss_dssp EETTTTEEEEEEEE----EECSCCCCEEECTTCE---------EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-ESCCC
T ss_pred EcCCCCeEEEeeee----eccCCcceEEEccCCe---------EEEEEecCCCceEEEEEecCCcEEEeeeeec-CCCCC
Confidence 4566676543 222 2346677899999998 6666543 7899999998776 3334333 66788
Q ss_pred EEEEEecCCCEEEEEe-CCCcEEEEeCC-CCe--EEEEeecC---------CCCeeEEEEccCCCEEEEe--cCcEEEEE
Q 036605 77 AGLAFAKKGRSLHVVG-TNGMASEMKSE-MGE--VIREFKAS---------EKPISSSAFLCEEKIFALA--SSEVRILS 141 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~-~dg~i~~wd~~-~~~--~~~~~~~~---------~~~i~~l~~~~~~~~l~~~--~~~i~i~d 141 (340)
..++|+|+|++|++++ .++.|.+|++. ++. .+..+... ...+.+++|+|+|+++++. ++.|++|+
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 9999999999999888 67999999995 333 23333221 1247889999999955543 33499999
Q ss_pred CC-CCcee--EEeecCC-CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCC------Ceeeeeec
Q 036605 142 LE-NGEEV--LKFSDDV-GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHS------PVAIDCKN 211 (340)
Q Consensus 142 ~~-~~~~~--~~~~~~~-~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 211 (340)
+. +++.. ..+..+. ..+..++|+|+|+++++++..++.|.+|+++...++......+. ..+ .....+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i-- 245 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAI-- 245 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEE--
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeE--
Confidence 98 45432 2223322 36788999999998888777789999999963233221111111 111 122223
Q ss_pred CCCCCCCCEE-EEEeCCCcEEEEECCC
Q 036605 212 SPNGEDGTVI-LAVAESGVAYSWDLKT 237 (340)
Q Consensus 212 ~~~~~~~~~l-~~~s~dg~i~vwd~~~ 237 (340)
.+ +|+|.+| ++...++.|.+|++..
T Consensus 246 ~~-spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 246 RL-SHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EE-CTTSCEEEEEEETTTEEEEEEECG
T ss_pred EE-CCCCCEEEEEeCCCCEEEEEEECC
Confidence 44 8999987 4555689999999863
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=5.3e-18 Score=146.24 Aligned_cols=207 Identities=13% Similarity=0.073 Sum_probs=154.6
Q ss_pred CccCCCCceeeeeeCCCCCC-----CCCeEEEEeeccccccccccCceEEEEEc--CCCcEEEEEccCCeeEEEecCCCC
Q 036605 1 IWSTNDGSLLAEWKQPDGEP-----VVSYSCLACGFVGKKRRKERGTLLLALGT--SNGDILAVDVLTGEMKWKSTGRHP 73 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~-----~~~v~~l~~sp~~~~~~~~~~~~~l~~g~--~dg~i~i~d~~~~~~~~~~~~~h~ 73 (340)
+||+.+++....+....... ...+.+++|+|+++ +++++. .++.|.+||..+++....+.. +.
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~---------~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~ 184 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN---------TVYISGIGKESVIWVVDGGNIKLKTAIQN-TG 184 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT---------EEEEEEESSSCEEEEEETTTTEEEEEECC-CC
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC---------EEEEEecCCCceEEEEcCCCCceEEEecC-CC
Confidence 58888998887776320000 01278999999997 666655 578999999999998888875 55
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeec----CCCCeeEEEEccCCCEEEEec---CcEEEEECCCCc
Q 036605 74 GGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKA----SEKPISSSAFLCEEKIFALAS---SEVRILSLENGE 146 (340)
Q Consensus 74 ~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~~~ 146 (340)
..+.+++|+|+++.|++++.++.|.+||+.+++.+..+.. +...+..++|+|+++.+++++ +.|.+||+.+++
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 5688999999999999999999999999999998877664 344577899999999876643 449999999998
Q ss_pred eeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeC
Q 036605 147 EVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAE 226 (340)
Q Consensus 147 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~ 226 (340)
.+..+.... ...++|+|++++++++...++.|.+||+ .+++....+. ... ....+ .+ ++++.+|+++..
T Consensus 265 ~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~--~~~~~~~~~~--~~~--~~~~~--~~-s~dg~~l~v~~~ 333 (353)
T 3vgz_A 265 ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDA--KSYKVVKTFD--TPT--HPNSL--AL-SADGKTLYVSVK 333 (353)
T ss_dssp EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEET--TTTEEEEEEE--CCS--EEEEE--EE-CTTSCEEEEEEE
T ss_pred EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEEC--CCCeEEEEEe--cCC--CCCeE--EE-cCCCCEEEEEEc
Confidence 887776433 2569999999988887766999999998 4444332221 122 23333 44 788887777766
Q ss_pred CC
Q 036605 227 SG 228 (340)
Q Consensus 227 dg 228 (340)
++
T Consensus 334 ~~ 335 (353)
T 3vgz_A 334 QK 335 (353)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=1.2e-17 Score=144.03 Aligned_cols=217 Identities=11% Similarity=0.073 Sum_probs=141.0
Q ss_pred CccCCCCcee--eeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc-CCCcEEEEEcc-CCe--eEEEecCC---
Q 036605 1 IWSTNDGSLL--AEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT-SNGDILAVDVL-TGE--MKWKSTGR--- 71 (340)
Q Consensus 1 vwd~~~g~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~-~dg~i~i~d~~-~~~--~~~~~~~~--- 71 (340)
+||+.+|... ..+. .+...+..++|+|+++ +|++++ .++.|.+|++. ++. .+..+...
T Consensus 67 ~~~~~~g~~~~~~~~~----~~~~~p~~~a~spdg~---------~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 67 AWQIDGQTAHKLNTVV----APGTPPAYVAVDEARQ---------LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEETTEEEEEEEEE----EESCCCSEEEEETTTT---------EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCC
T ss_pred EEEecCCcEEEeeeee----cCCCCCEEEEECCCCC---------EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCC
Confidence 4777666533 2322 3456788999999998 777776 78999999995 333 23333210
Q ss_pred -----CCCCeEEEEEecCCCEEEEEeCCCcEEEEeCC-CCeEEE--EeecC-CCCeeEEEEccCCCEEEEe---cCcEEE
Q 036605 72 -----HPGGLAGLAFAKKGRSLHVVGTNGMASEMKSE-MGEVIR--EFKAS-EKPISSSAFLCEEKIFALA---SSEVRI 139 (340)
Q Consensus 72 -----h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~-~~~~~~--~~~~~-~~~i~~l~~~~~~~~l~~~---~~~i~i 139 (340)
+...+.+++|+|+|+.+++...++.|.+|++. +++... .+... ...+..++|+|+|++++++ ++.|.+
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 213 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIAS 213 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEE
Confidence 12248899999999955555567899999998 554332 22222 2357889999999977663 334999
Q ss_pred EECCC--Cce--eEEeecCC------CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeee-cCCCeeee
Q 036605 140 LSLEN--GEE--VLKFSDDV------GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSM-RHSPVAID 208 (340)
Q Consensus 140 ~d~~~--~~~--~~~~~~~~------~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~ 208 (340)
|++.. ++. +..+.... ..+..++|+|+|++|+++...++.|.+|+++. .+.......+.. ...+..+
T Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~- 291 (347)
T 3hfq_A 214 LKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDF- 291 (347)
T ss_dssp EEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEE-
T ss_pred EEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeE-
Confidence 98874 432 22333222 34788999999998877666689999999842 221111111111 1122333
Q ss_pred eecCCCCCCCCEEEEEeCC-CcEEEEECC
Q 036605 209 CKNSPNGEDGTVILAVAES-GVAYSWDLK 236 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~d-g~i~vwd~~ 236 (340)
.+ +|++.+|++++.+ +.|.+|++.
T Consensus 292 ---~~-spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 292 ---DL-DPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp ---EE-CTTSSEEEEEETTTTEEEEEEEC
T ss_pred ---EE-CCCCCEEEEEEcCCCcEEEEEEe
Confidence 34 8999988888765 899999553
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=2.8e-19 Score=169.60 Aligned_cols=194 Identities=9% Similarity=0.009 Sum_probs=142.0
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe--eEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE--MKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEM 100 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~w 100 (340)
.+.+++|||||+ +|++++. +.|++||+.++. ....+.. |...+.+++|+|||+.|++++. +.|++|
T Consensus 110 ~v~~~~~SpDg~---------~l~~~~~-~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~ 177 (741)
T 2ecf_A 110 GIVDYQWSPDAQ---------RLLFPLG-GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVI 177 (741)
T ss_dssp ESCCCEECTTSS---------EEEEEET-TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEE
T ss_pred CcceeEECCCCC---------EEEEEeC-CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEE
Confidence 378999999999 8888876 999999999882 3445666 7888999999999999998874 599999
Q ss_pred eCCCCeEEEEeecCCCC----------------eeEEEEccCCCEEEEe--cC---------------------------
Q 036605 101 KSEMGEVIREFKASEKP----------------ISSSAFLCEEKIFALA--SS--------------------------- 135 (340)
Q Consensus 101 d~~~~~~~~~~~~~~~~----------------i~~l~~~~~~~~l~~~--~~--------------------------- 135 (340)
|+.+++.......+... +..++|+|||++|+++ ++
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 99998876554433332 4789999999988774 22
Q ss_pred ------cEEEEECCC-CceeEEee--cCCCCeEEEEECCCCCEEEEEEc----CCCeEEEEEccCCCCCccCCceeeecC
Q 036605 136 ------EVRILSLEN-GEEVLKFS--DDVGPLQYVSASDGAKIIITAGY----GEKHLQVWRCDISSKTVNKGPALSMRH 202 (340)
Q Consensus 136 ------~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~ 202 (340)
.|++||+.+ ++...... .|...+..++| |||++|++++. .+..|.+||+ .+++...... ...
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~--~~g~~~~~~~--~~~ 332 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTL--ASNQQRVLAH--ETS 332 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEET--TTCCEEEEEE--EEC
T ss_pred CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEEC--CCCceEEEEE--cCC
Confidence 588899988 76543332 46778999999 99999997654 2567899998 4443322221 111
Q ss_pred CCe---eeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 203 SPV---AIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 203 ~~~---~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
..+ ...+ .| +++|.++++++.||.+.||.+.
T Consensus 333 ~~~~~~~~~~--~~-spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 333 PTWVPLHNSL--RF-LDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp SSCCCCCSCC--EE-CTTSCEEEEECTTSSCEEEEEC
T ss_pred CCcCCcCCce--EE-CCCCeEEEEecCCCccEEEEEc
Confidence 111 1122 44 8999999999999987777665
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=4.4e-19 Score=168.27 Aligned_cols=200 Identities=9% Similarity=0.019 Sum_probs=147.4
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcC-CC-----cEEEEEccCCeeEEEecCCCCC--------------------
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTS-NG-----DILAVDVLTGEMKWKSTGRHPG-------------------- 74 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~-dg-----~i~i~d~~~~~~~~~~~~~h~~-------------------- 74 (340)
...+.+++|||||+ +|++++. || .|++||+.+++....+.. +..
T Consensus 36 ~~~~~~~~~SpdG~---------~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 105 (741)
T 2ecf_A 36 GPTLMKPKVAPDGS---------RVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS-KVVLPGTETLSDEEKARRERQRI 105 (741)
T ss_dssp CCCCEEEEECTTSS---------EEEEEECCSSCTTEEEEEEEETTTCCEEEEECG-GGTC-------------------
T ss_pred CCCCCCceEecCCC---------EEEEEeccCCCCcccEEEEEECCCCceeEccch-hhcccccccccchhhhhhhhhhh
Confidence 45689999999999 8999888 88 899999999987665543 322
Q ss_pred ----CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCe--EEEEeecCCCCeeEEEEccCCCEEEEe-cCcEEEEECCCCce
Q 036605 75 ----GLAGLAFAKKGRSLHVVGTNGMASEMKSEMGE--VIREFKASEKPISSSAFLCEEKIFALA-SSEVRILSLENGEE 147 (340)
Q Consensus 75 ----~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~~i~i~d~~~~~~ 147 (340)
.|.+++|+|||+.|++++. +.|.+||+.++. ....+..+...+..++|+|||++|+.+ +++|++||+.+++.
T Consensus 106 ~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 106 AAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQ 184 (741)
T ss_dssp -CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEE
T ss_pred ccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCE
Confidence 3789999999999999886 899999999882 344566677789999999999988774 45699999998866
Q ss_pred eEEeecCCCC----------------eEEEEECCCCCEEEEEEcCCC---------------------------------
Q 036605 148 VLKFSDDVGP----------------LQYVSASDGAKIIITAGYGEK--------------------------------- 178 (340)
Q Consensus 148 ~~~~~~~~~~----------------v~~~~~s~~~~~l~s~~~~d~--------------------------------- 178 (340)
......+... +..++|+|||++|++++. |+
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~-d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI-DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE-ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE-cCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 5444333332 477999999999999776 44
Q ss_pred eEEEEEccCCC-CCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeC-----CCcEEEEECCCCC
Q 036605 179 HLQVWRCDISS-KTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAE-----SGVAYSWDLKTVS 239 (340)
Q Consensus 179 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~-----dg~i~vwd~~~~~ 239 (340)
.|.+||+ .+ ++...... ...+...+..+ .| |||.+|++++. ++.|++||+.+++
T Consensus 264 ~l~~~d~--~~~~~~~~~~~-~~~~~~~~~~~--~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 264 KLGVISP--AEQAQTQWIDL-GKEQDIYLARV--NW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EEEEECS--STTCCCEEECC-CSCSSEEEEEE--EE--EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred EEEEEEC--CCCCceEEecC-CCCcceEEEEE--Ee--CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 6777887 34 33211110 00233334444 55 88998887764 5679999998754
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=1e-18 Score=165.36 Aligned_cols=215 Identities=10% Similarity=0.029 Sum_probs=151.9
Q ss_pred CccCCCCceeeeeeCCCCCCCC---CeEEEEeeccccccccccCceEEEEEcCC---------CcEEEEEccCCeeEEEe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVV---SYSCLACGFVGKKRRKERGTLLLALGTSN---------GDILAVDVLTGEMKWKS 68 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~~~~~~~~~l~~g~~d---------g~i~i~d~~~~~~~~~~ 68 (340)
+||+.+|+....+. +|.. .|.+++|||||+ +|++++.+ +.|++||+.+++. ..+
T Consensus 41 ~~d~~~g~~~~~~~----~~~~~~~~v~~~~~SpDg~---------~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l 106 (723)
T 1xfd_A 41 LWNVETNTSTVLIE----GKKIESLRAIRYEISPDRE---------YALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSL 106 (723)
T ss_dssp EBCGGGCCCEEEEC----TTTTTTTTCSEEEECTTSS---------EEEEEESCCCCSSSCCCSEEEEEESSSCCC-EEC
T ss_pred EEECCCCcEEEEec----cccccccccceEEECCCCC---------EEEEEecCccceeecceeeEEEEECCCCce-Eec
Confidence 58999998776665 4443 499999999999 89988764 7888999999875 334
Q ss_pred cC--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCe------------------eEEEEccCCC
Q 036605 69 TG--RHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPI------------------SSSAFLCEEK 128 (340)
Q Consensus 69 ~~--~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i------------------~~l~~~~~~~ 128 (340)
.. .|...+..++|+|||+.|++++. +.|++||+.+++.......+...+ .+++|+|||+
T Consensus 107 ~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~ 185 (723)
T 1xfd_A 107 DPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT 185 (723)
T ss_dssp CCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS
T ss_pred cCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC
Confidence 32 24555899999999999999876 799999999988765554433333 7899999999
Q ss_pred EEEEec--C----------------------------------cEEEEECCCCceeEEeecC------CCCeEEEEECCC
Q 036605 129 IFALAS--S----------------------------------EVRILSLENGEEVLKFSDD------VGPLQYVSASDG 166 (340)
Q Consensus 129 ~l~~~~--~----------------------------------~i~i~d~~~~~~~~~~~~~------~~~v~~~~~s~~ 166 (340)
.|+++. . +|++||+.+++....+..+ ...+..++|+||
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 987742 1 4899999988765566544 567889999999
Q ss_pred CCEEEEEEcC---CCeEEEEEccCCCCCccCCceeeecCCCeeee--eecCCCCCCCCEEEE--EeCCC------cEEEE
Q 036605 167 AKIIITAGYG---EKHLQVWRCDISSKTVNKGPALSMRHSPVAID--CKNSPNGEDGTVILA--VAESG------VAYSW 233 (340)
Q Consensus 167 ~~~l~s~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~--~s~dg------~i~vw 233 (340)
|+++++.... +..|.+||+ .+++...... ..+...+.. ....| +|||..|+. ...+| .|++|
T Consensus 266 g~~l~~~~~~~~~~~~i~~~d~--~~g~~~~~~~--~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~ 340 (723)
T 1xfd_A 266 TKVAVTWLNRAQNVSILTLCDA--TTGVCTKKHE--DESEAWLHRQNEEPVF-SKDGRKFFFIRAIPQGGRGKFYHITVS 340 (723)
T ss_dssp SEEEEEEEETTSCEEEEEEEET--TTCCEEEEEE--EECSSCCCCCCCCCEE-CTTSCSEEEEEEECCSSSSCEEEEEEE
T ss_pred CeEEEEEEcCCCCeEEEEEEeC--CCCcceEEEE--eccCCEEeccCCCceE-cCCCCeEEEEEecccCCCcceeEEEEE
Confidence 9988775542 357899998 4444322111 112222110 01244 899987765 45666 57778
Q ss_pred EC
Q 036605 234 DL 235 (340)
Q Consensus 234 d~ 235 (340)
|+
T Consensus 341 d~ 342 (723)
T 1xfd_A 341 SS 342 (723)
T ss_dssp CS
T ss_pred ec
Confidence 73
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=1.8e-18 Score=145.04 Aligned_cols=206 Identities=12% Similarity=0.048 Sum_probs=144.0
Q ss_pred CccCCC-CceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc--CCC--cEEEEEccCCeeEEEecCCCCCC
Q 036605 1 IWSTND-GSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT--SNG--DILAVDVLTGEMKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~-g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~--~dg--~i~i~d~~~~~~~~~~~~~h~~~ 75 (340)
+||+.+ ++...... .++...+.+++|+|+++ +|++++ .++ .|..|+..++. ...+.. + ..
T Consensus 66 ~~d~~~~~~~~~~~~---~~~~~~~~~~~~spdg~---------~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~-~~ 130 (297)
T 2ojh_A 66 RLSLAGDPSPEKVDT---GFATICNNDHGISPDGA---------LYAISDKVEFGKSAIYLLPSTGGT-PRLMTK-N-LP 130 (297)
T ss_dssp EEESSSCCSCEECCC---TTCCCBCSCCEECTTSS---------EEEEEECTTTSSCEEEEEETTCCC-CEECCS-S-SS
T ss_pred EEeCCCCCCceEecc---ccccccccceEECCCCC---------EEEEEEeCCCCcceEEEEECCCCc-eEEeec-C-CC
Confidence 588888 77665554 23457889999999998 888888 334 44555555554 344443 3 35
Q ss_pred eEEEEEecCCCEEE-EEeCCCcEEEEeC--CCCeEEEEeecCCCCeeEEEEccCCCEEEEe---cCcEEEEECC-CCcee
Q 036605 76 LAGLAFAKKGRSLH-VVGTNGMASEMKS--EMGEVIREFKASEKPISSSAFLCEEKIFALA---SSEVRILSLE-NGEEV 148 (340)
Q Consensus 76 v~~v~~~~~~~~l~-s~~~dg~i~~wd~--~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~---~~~i~i~d~~-~~~~~ 148 (340)
+..++|+|+++.|+ +++.++.+.+|++ .++. ...+..+...+.+++|+|+++.++.+ ++.+.+|++. .+..+
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 209 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc
Confidence 99999999999877 6778898888885 4444 34566677789999999999988764 3347888775 45566
Q ss_pred EEeecCCCCeEEEEECCCCCEEEEEEcC----------CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCC
Q 036605 149 LKFSDDVGPLQYVSASDGAKIIITAGYG----------EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDG 218 (340)
Q Consensus 149 ~~~~~~~~~v~~~~~s~~~~~l~s~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (340)
..+..|...+..+.|+|++++|++++.. ++.|.+||+ .+++...... ...+...+..+ .| +|++
T Consensus 210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~--~~~~~~~~~~-~~~~~~~~~~~--~~-spdg 283 (297)
T 2ojh_A 210 ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM--DGGNVETLFD-LFGGQGTMNSP--NW-SPDG 283 (297)
T ss_dssp EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET--TSCSCEEEEE-EEESTTTSCSC--CB-CTTS
T ss_pred EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec--CCCCceeeec-cCCCCcccccc--eE-CCCC
Confidence 7777788889999999999999887762 256999998 3433211111 11333333333 56 8999
Q ss_pred CEEEEEeCCC
Q 036605 219 TVILAVAESG 228 (340)
Q Consensus 219 ~~l~~~s~dg 228 (340)
.+|++++.+.
T Consensus 284 ~~l~~~~~~~ 293 (297)
T 2ojh_A 284 DEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEECC
T ss_pred CEEEEEEecc
Confidence 9998887664
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=8e-19 Score=165.64 Aligned_cols=194 Identities=13% Similarity=0.070 Sum_probs=141.1
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMK 101 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd 101 (340)
..|.+++|||+ + .++.+ .++.|++||+.+++... +.. +.+.+.+++|+|||+.|+++ .++.|++||
T Consensus 82 ~~v~~~~~spd-~---------~~~~~-~~~~i~~~d~~~~~~~~-l~~-~~~~~~~~~~SpdG~~la~~-~~~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGR-G---------LVVLF-TQGGLVGFDMLARKVTY-LFD-TNEETASLDFSPVGDRVAYV-RNHNLYIAR 147 (706)
T ss_dssp CCCEEEEETTT-T---------EEEEE-ETTEEEEEETTTTEEEE-EEC-CTTCCTTCEECTTSSEEEEE-ETTEEEEEE
T ss_pred cCceeEEECCC-C---------eEEEE-ECCEEEEEECCCCceEE-ccC-CcccccCCcCCCCCCEEEEE-ECCeEEEEe
Confidence 56999999999 5 45554 35999999999887554 444 67789999999999999985 679999999
Q ss_pred CCC-----CeEEEEeecCCCC--------------eeEEEEccCCCEEEEec----------------------------
Q 036605 102 SEM-----GEVIREFKASEKP--------------ISSSAFLCEEKIFALAS---------------------------- 134 (340)
Q Consensus 102 ~~~-----~~~~~~~~~~~~~--------------i~~l~~~~~~~~l~~~~---------------------------- 134 (340)
+.+ ++.......+... +.+++|+|||++|+++.
T Consensus 148 ~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~ 227 (706)
T 2z3z_A 148 GGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPM 227 (706)
T ss_dssp CBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCB
T ss_pred cCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCC
Confidence 998 7765544333332 48999999999998764
Q ss_pred -------CcEEEEECCCCceeEEee--cCCCCeEEEEECCCCCEEEEEEcCCC-----eEEEEEccCCCCCccCCceeee
Q 036605 135 -------SEVRILSLENGEEVLKFS--DDVGPLQYVSASDGAKIIITAGYGEK-----HLQVWRCDISSKTVNKGPALSM 200 (340)
Q Consensus 135 -------~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~ 200 (340)
..|++||+.+++...... .|...+..++|+|||++|++++. ++ .|.+||+ .+++....+. ..
T Consensus 228 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-~~~~~~~~v~~~d~--~~g~~~~~~~-~~ 303 (706)
T 2z3z_A 228 AGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV-NRAQNECKVNAYDA--ETGRFVRTLF-VE 303 (706)
T ss_dssp TTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE-CTTSCEEEEEEEET--TTCCEEEEEE-EE
T ss_pred CCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe-CCCCCeeEEEEEEC--CCCceeeEEE-Ec
Confidence 239999999887544332 45677899999999999998776 54 8999998 4442211111 11
Q ss_pred cCCCee---eeeecCCCCC--CCCEEEEEeCCCcEEEEECC
Q 036605 201 RHSPVA---IDCKNSPNGE--DGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 201 ~~~~~~---~~~~~~~~~~--~~~~l~~~s~dg~i~vwd~~ 236 (340)
...... ..+ .| +| +|.++++++.||.++||.+.
T Consensus 304 ~~~~~~~~~~~~--~~-sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 304 TDKHYVEPLHPL--TF-LPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp ECSSCCCCCSCC--EE-CTTCSSEEEEEECTTSSCEEEEEE
T ss_pred cCCCeECccCCc--ee-ecCCCCEEEEEEccCCccEEEEEE
Confidence 111111 111 34 78 99999999999999998775
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=2.3e-18 Score=162.93 Aligned_cols=219 Identities=11% Similarity=0.018 Sum_probs=147.8
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCe----
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGL---- 76 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v---- 76 (340)
|||+.+|+.. .+... ..+...+.+++|||||+ .||.++. +.|++||+.+++....... +...+
T Consensus 95 ~~d~~~~~~~-~l~~~-~~~~~~~~~~~~SPdG~---------~la~~~~-~~i~~~~~~~g~~~~~~~~-~~~~~~~~g 161 (723)
T 1xfd_A 95 LSKIPHGDPQ-SLDPP-EVSNAKLQYAGWGPKGQ---------QLIFIFE-NNIYYCAHVGKQAIRVVST-GKEGVIYNG 161 (723)
T ss_dssp EEESSSCCCE-ECCCT-TCCSCCCSBCCBCSSTT---------CEEEEET-TEEEEESSSSSCCEEEECC-CBTTTEEEE
T ss_pred EEECCCCceE-eccCC-ccccccccccEECCCCC---------EEEEEEC-CeEEEEECCCCceEEEecC-CCCCceECc
Confidence 5788888762 33321 24555688999999998 7888875 7999999999876655554 33333
Q ss_pred --------------EEEEEecCCCEEEEEeCCC----------------------------------cEEEEeCCCCeEE
Q 036605 77 --------------AGLAFAKKGRSLHVVGTNG----------------------------------MASEMKSEMGEVI 108 (340)
Q Consensus 77 --------------~~v~~~~~~~~l~s~~~dg----------------------------------~i~~wd~~~~~~~ 108 (340)
.+++|+|||+.|++++.|+ .|.+||+.+++..
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~ 241 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD 241 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee
Confidence 7899999999999887553 7999999988755
Q ss_pred EEeecC------CCCeeEEEEccCCCEEEEec------CcEEEEECCCCceeEEeec-CCCCe----EEEEECCCCCEEE
Q 036605 109 REFKAS------EKPISSSAFLCEEKIFALAS------SEVRILSLENGEEVLKFSD-DVGPL----QYVSASDGAKIII 171 (340)
Q Consensus 109 ~~~~~~------~~~i~~l~~~~~~~~l~~~~------~~i~i~d~~~~~~~~~~~~-~~~~v----~~~~~s~~~~~l~ 171 (340)
..+..+ ...+..++|+|||+++++.. ..|++||+.+++....+.. +...+ ..++|+|||+.|+
T Consensus 242 ~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 242 LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEE
Confidence 555543 45688999999999886632 2399999999876655533 33443 3789999999887
Q ss_pred EE-EcCCC----eEEEEEcc-CCCCCc--cCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCC---CcEEEEECCC
Q 036605 172 TA-GYGEK----HLQVWRCD-ISSKTV--NKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAES---GVAYSWDLKT 237 (340)
Q Consensus 172 s~-~~~d~----~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~d---g~i~vwd~~~ 237 (340)
.. +..++ ...||.++ ...+.. ...+. .++......+ .| +|++..|+..+.+ +.+++|++..
T Consensus 322 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~~~--~~-spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 322 FIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--SGDWDVTKIL--AY-DEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--CSSSCEEEEE--EE-ETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred EEEecccCCCcceeEEEEEeccCCCCccceeEee--cCCeEEEeee--EE-cCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 64 44467 44444442 122220 22221 1121111111 45 8999999776655 7899999865
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.79 E-value=2.4e-17 Score=155.59 Aligned_cols=199 Identities=14% Similarity=0.121 Sum_probs=140.7
Q ss_pred eEEEEeeccccccccccCceEEEEEc---------------------------------CCCcEEEEEccCCeeEEEecC
Q 036605 24 YSCLACGFVGKKRRKERGTLLLALGT---------------------------------SNGDILAVDVLTGEMKWKSTG 70 (340)
Q Consensus 24 v~~l~~sp~~~~~~~~~~~~~l~~g~---------------------------------~dg~i~i~d~~~~~~~~~~~~ 70 (340)
+.+++|||||+ +|++++ .+..|++||+.+++.......
T Consensus 183 ~~~~~~SpDg~---------~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 183 EKGTFWSPKGS---------CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCSEEECTTSS---------EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred CceEEECCCCC---------EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 58999999999 888887 446899999999876544432
Q ss_pred -CCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEeCCCC-eEEEEeec-CCC---CeeEEEEcc--CCCEEEEecCc-
Q 036605 71 -RHPGGLAGLAFAKKGRSLHVVGTNG-----MASEMKSEMG-EVIREFKA-SEK---PISSSAFLC--EEKIFALASSE- 136 (340)
Q Consensus 71 -~h~~~v~~v~~~~~~~~l~s~~~dg-----~i~~wd~~~~-~~~~~~~~-~~~---~i~~l~~~~--~~~~l~~~~~~- 136 (340)
.|...+.+++|+|||+.|++++.++ .|.+||+.++ ........ +.. .+..++|+| +|+++++++.+
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 3677899999999999999887775 8999999998 43332322 221 246789999 99988876543
Q ss_pred -EEEEECC-CCceeEEeecCCCCeEE-EEECCCCCEEEEEEcCCC--eEEEEEccCCCCCccCCceeeecCCCeeeeeec
Q 036605 137 -VRILSLE-NGEEVLKFSDDVGPLQY-VSASDGAKIIITAGYGEK--HLQVWRCDISSKTVNKGPALSMRHSPVAIDCKN 211 (340)
Q Consensus 137 -i~i~d~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (340)
+++|++. ++..+..+..+...+.. ++|+|+++.|+.++..++ .+.||.++..++.. ..+ .+...+..+
T Consensus 334 ~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l----~~~~~~~~~-- 406 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-KDL----TPESGMHRT-- 406 (706)
T ss_dssp SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-EES----CCSSSEEEE--
T ss_pred ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-eec----cCCCceEEE--
Confidence 6777665 56667777778778877 799999999888777454 34444443244331 111 233334443
Q ss_pred CCCCCCCCEEEEEeCC----CcEEEEECCCCC
Q 036605 212 SPNGEDGTVILAVAES----GVAYSWDLKTVS 239 (340)
Q Consensus 212 ~~~~~~~~~l~~~s~d----g~i~vwd~~~~~ 239 (340)
.| +|++.+++..+.+ +.|++||+.+++
T Consensus 407 ~~-spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 407 QL-SPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EE-CTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EE-CCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 55 8999988876544 569999998764
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=1.3e-17 Score=163.86 Aligned_cols=194 Identities=12% Similarity=0.050 Sum_probs=153.9
Q ss_pred CCCeEEEEee-ccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCC-CeEEEEEecCCCEEEEEeCCCcEE
Q 036605 21 VVSYSCLACG-FVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPG-GLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 21 ~~~v~~l~~s-p~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
...+.+++|| |+|+ +|++++ ++.|++|++.+++.. .+.. |.+ .+..++|+ +|+.|++++.+..+.
T Consensus 295 ~~~v~~~~~S~pdG~---------~la~~~-~~~i~~~~~~~~~~~-~~~~-~~~~~~~~~~~s-dg~~l~~~s~~~~l~ 361 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGD---------LIAFVS-RGQAFIQDVSGTYVL-KVPE-PLRIRYVRRGGD-TKVAFIHGTREGDFL 361 (1045)
T ss_dssp CGGGGEEEEEECGGG---------CEEEEE-TTEEEEECTTSSBEE-ECSC-CSCEEEEEECSS-SEEEEEEEETTEEEE
T ss_pred ccccceeeecCCCCC---------EEEEEE-cCEEEEEcCCCCceE-EccC-CCcceEEeeeEc-CCCeEEEEECCCceE
Confidence 3468999999 9998 788877 889999999888644 4555 777 89999999 999999999888888
Q ss_pred -EEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 99 -EMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 99 -~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
+|++.+++... +..+...+..++|+|+|++|++++. .|++||+.+++....+..|...+..++|+|||++|++++.
T Consensus 362 ~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 362 GIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp EEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred EEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEec
Confidence 99998876543 4467788999999999999987554 4999999999877777788999999999999999988776
Q ss_pred CC---------CeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 176 GE---------KHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 176 ~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.+ +.|++||+ .+++ ...+. .+......+ .| +++|.+|++++.++...+|+...
T Consensus 441 ~~~~~~~~~~~~~i~l~d~--~~g~-~~~l~---~~~~~~~~~--~~-spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDM--EGRK-IFAAT---TENSHDYAP--AF-DADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEET--TTTE-EEECS---CSSSBEEEE--EE-CTTSCEEEEEESCCCCCEECSSS
T ss_pred CccccccCCCCCeEEEEEC--CCCc-EEEee---CCCcccCCc--eE-cCCCCEEEEEecccCCcCcchhc
Confidence 22 48999998 3433 22222 333333333 56 89999999999988888887654
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=7.1e-17 Score=140.22 Aligned_cols=202 Identities=11% Similarity=0.070 Sum_probs=138.8
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc-CCeeEEEecCCCCCCeEEEEEecCCCE--EEEEe------
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL-TGEMKWKSTGRHPGGLAGLAFAKKGRS--LHVVG------ 92 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~--l~s~~------ 92 (340)
..+..++|+|+++ +|++++.+ .|.+|++. +++..........+.+.+++|+|+|+. +++++
T Consensus 40 ~~~~~~a~spdg~---------~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 40 EPISWMTFDHERK---------NIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAV 109 (365)
T ss_dssp CCCSEEEECTTSS---------EEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred CCCcEEEECCCCC---------EEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCccee
Confidence 4678899999999 88888887 99999997 787543332101134667899999994 45553
Q ss_pred -------CCCcEEEEeCC-CCeEEEEee----cCCCCeeEEEEccCCCEEEEec---CcEEEEECC-CCcee--EEee--
Q 036605 93 -------TNGMASEMKSE-MGEVIREFK----ASEKPISSSAFLCEEKIFALAS---SEVRILSLE-NGEEV--LKFS-- 152 (340)
Q Consensus 93 -------~dg~i~~wd~~-~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~-~~~~~--~~~~-- 152 (340)
.++.+.+|++. +++....+. .+...+.+++|+|+|+++++++ +.|++||+. +++.. ..+.
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 68999999997 466544333 2456789999999999887743 349999998 67543 2333
Q ss_pred cCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccC---Cce-eee---cCCC------eeeeeecC-CCCCCC
Q 036605 153 DDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNK---GPA-LSM---RHSP------VAIDCKNS-PNGEDG 218 (340)
Q Consensus 153 ~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~---~~~-~~~---~~~~------~~~~~~~~-~~~~~~ 218 (340)
.|...+..++|+|+|+++++++..++.|.+|+++..+++... .+. +.. ++.. ....+ . + +|+|
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i--~~~-spdG 266 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV--CAL-TFSG 266 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEE--EEE-CTTS
T ss_pred CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccE--EEE-CCCC
Confidence 235678999999999999888776889999998533333211 000 000 1110 23333 4 4 8999
Q ss_pred CEEEEEeCCC------cEEEEECC
Q 036605 219 TVILAVAESG------VAYSWDLK 236 (340)
Q Consensus 219 ~~l~~~s~dg------~i~vwd~~ 236 (340)
.+|++++.++ .|.+|++.
T Consensus 267 ~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 267 KYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp SEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CEEEEECCCCCCCCCCeEEEEEEC
Confidence 9888776433 79999986
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=6.2e-16 Score=133.99 Aligned_cols=201 Identities=12% Similarity=0.089 Sum_probs=130.8
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEc-CCCcEEEEEccCCeeEEEe------cC-------CCCCCeEEEEEecCC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGT-SNGDILAVDVLTGEMKWKS------TG-------RHPGGLAGLAFAKKG 85 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~------~~-------~h~~~v~~v~~~~~~ 85 (340)
+......+++ +++ +|+++. .++.|.+|++.....+..+ .+ .+...+.+++|+|+|
T Consensus 98 ~~~~p~~~~~--dg~---------~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 98 MGADPCYLTT--NGK---------NIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp SSSCEEEEEE--CSS---------EEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred CCCCcEEEEE--CCC---------EEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 3445666777 666 555554 6889999999754322111 11 022346889999999
Q ss_pred CEEEEEeC-CCcEEEEeCCCCeE------E------EE-eecCCCCeeEEEEccCCCEEEEec---CcEEEEECCCCce-
Q 036605 86 RSLHVVGT-NGMASEMKSEMGEV------I------RE-FKASEKPISSSAFLCEEKIFALAS---SEVRILSLENGEE- 147 (340)
Q Consensus 86 ~~l~s~~~-dg~i~~wd~~~~~~------~------~~-~~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~~~~- 147 (340)
++|++++. ++.|.+|++..... + .. .......+..++|+|+|+++++++ +.|.+||+.+++.
T Consensus 167 ~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 167 KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 97776664 78999998764331 1 11 222345678999999999886643 4499999987743
Q ss_pred -eEEee---cCCCCeEEEEECCCCCEEEEEEcC-CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEE
Q 036605 148 -VLKFS---DDVGPLQYVSASDGAKIIITAGYG-EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVIL 222 (340)
Q Consensus 148 -~~~~~---~~~~~v~~~~~s~~~~~l~s~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (340)
+..+. .+......++|+|||++|+++... ++.|.+|+++...+.......+..+..+..+. | +|+|.+|+
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~----~-spdg~~l~ 321 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFI----I-TPNGKYLL 321 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEE----E-CTTSCEEE
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEE----E-CCCCCEEE
Confidence 23332 233456899999999999888875 68999999953333321111222122233333 3 89999888
Q ss_pred EEe-CCCcEEEEECC
Q 036605 223 AVA-ESGVAYSWDLK 236 (340)
Q Consensus 223 ~~s-~dg~i~vwd~~ 236 (340)
+++ .++.|.+|++.
T Consensus 322 ~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 322 VACRDTNVIQIFERD 336 (361)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEEE
Confidence 887 67889997554
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=5.2e-17 Score=149.85 Aligned_cols=204 Identities=14% Similarity=0.067 Sum_probs=140.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcC---CCcEEEEEccC---CeeEEEecCCCCC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTS---NGDILAVDVLT---GEMKWKSTGRHPG 74 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~---dg~i~i~d~~~---~~~~~~~~~~h~~ 74 (340)
||++.+|+.. .++ .++...+..++|||| + ++++++. +....+|.+.. +... .+.. + .
T Consensus 48 lw~~~~g~~~-~lt---~~~~~~~~~~~~spd-~---------~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~-~-~ 110 (582)
T 3o4h_A 48 AYLYDGGETV-KLN---REPINSVLDPHYGVG-R---------VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEA-V-K 110 (582)
T ss_dssp EEEEETTEEE-ECC---SSCCSEECEECTTCS-E---------EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTT-S-C
T ss_pred EEEEcCCCcE-eee---cccccccccccCCCC-e---------EEEEeccCCCCcceEEEEEeccCCCccc-cccC-C-C
Confidence 5777555544 343 244468999999999 8 7887765 45556655433 3323 4443 2 2
Q ss_pred CeEEEEEecCCCE-EEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec------CcEEEEECCCCce
Q 036605 75 GLAGLAFAKKGRS-LHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS------SEVRILSLENGEE 147 (340)
Q Consensus 75 ~v~~v~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~------~~i~i~d~~~~~~ 147 (340)
.+...+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||+++++++ ..|++||+.+++.
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 4557788988863 3444445556699999987655544332 8899999999998632 3399999998864
Q ss_pred eEEeecCCCCeEEEEECCCCCEEEEEEcCCC--eEEEEEccCCCCCccCCceeeecCCCeeeeeecC--------CCCCC
Q 036605 148 VLKFSDDVGPLQYVSASDGAKIIITAGYGEK--HLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNS--------PNGED 217 (340)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 217 (340)
..+..|...+..++|+|||++|+++.. ++ .|++||+ .+++.. ... .+...+..+ . | +||
T Consensus 188 -~~l~~~~~~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~--~~~~~~-~~~---~~~~~~~~~--~~~~~~~~~~-spd 256 (582)
T 3o4h_A 188 -RVFDSGEGSFSSASISPGMKVTAGLET-AREARLVTVDP--RDGSVE-DLE---LPSKDFSSY--RPTAITWLGY-LPD 256 (582)
T ss_dssp -EEECCSSCEEEEEEECTTSCEEEEEEC-SSCEEEEEECT--TTCCEE-ECC---CSCSHHHHH--CCSEEEEEEE-CTT
T ss_pred -eEeecCCCccccceECCCCCEEEEccC-CCeeEEEEEcC--CCCcEE-Ecc---CCCcChhhh--hhccccceeE-cCC
Confidence 467788888999999999999996554 88 8889988 444432 211 333222222 3 5 899
Q ss_pred CCEEEEEeCCCcEEEEEC
Q 036605 218 GTVILAVAESGVAYSWDL 235 (340)
Q Consensus 218 ~~~l~~~s~dg~i~vwd~ 235 (340)
|..+++++.||.+++|++
T Consensus 257 g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 257 GRLAVVARREGRSAVFID 274 (582)
T ss_dssp SCEEEEEEETTEEEEEET
T ss_pred CcEEEEEEcCCcEEEEEE
Confidence 988999999999999999
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=1.4e-16 Score=136.25 Aligned_cols=175 Identities=17% Similarity=0.083 Sum_probs=135.5
Q ss_pred CccCCCCceeeeeeCCC-CCCCCCeEEEEeeccccccccccCceEEEEEc------------CCCcEEEEEccCCeeEEE
Q 036605 1 IWSTNDGSLLAEWKQPD-GEPVVSYSCLACGFVGKKRRKERGTLLLALGT------------SNGDILAVDVLTGEMKWK 67 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~------------~dg~i~i~d~~~~~~~~~ 67 (340)
+||+.+++....+.... ..+...+.+++|+|+++ +|+++. .++.|.+||+.+++....
T Consensus 60 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK---------TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp EEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS---------EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred EEECCCCCeEeeEEcCCcccccccccceEECCCCC---------EEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 58888888877666220 00123677899999998 788775 579999999999987777
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC--------------------------------
Q 036605 68 STGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE-------------------------------- 115 (340)
Q Consensus 68 ~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-------------------------------- 115 (340)
+.. ...+.+++|+|++++|+++ ++.|.+||+.+++....+..+.
T Consensus 131 ~~~--~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 206 (337)
T 1pby_B 131 FEA--PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR 206 (337)
T ss_dssp EEC--CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEB
T ss_pred EeC--CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccc
Confidence 763 3467889999999988887 6889999999887765443221
Q ss_pred ----------------------------------CCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecCCCCeEEE
Q 036605 116 ----------------------------------KPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYV 161 (340)
Q Consensus 116 ----------------------------------~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~ 161 (340)
..+.+++|+|++++++++++.|++||+.+++.+..+..+ ..+.++
T Consensus 207 ~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~ 285 (337)
T 1pby_B 207 KDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLP-HSYYSV 285 (337)
T ss_dssp TTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEECS-SCCCEE
T ss_pred cccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCCCcCcceecCC-CceeeE
Confidence 123468999999999888888999999999887776543 467899
Q ss_pred EECCCCCEEEEEEcCCCeEEEEEccCCCCCc
Q 036605 162 SASDGAKIIITAGYGEKHLQVWRCDISSKTV 192 (340)
Q Consensus 162 ~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~ 192 (340)
+|+|+++++++++. ++.|.+||+ .+++.
T Consensus 286 ~~s~dg~~l~~~~~-~~~i~v~d~--~~~~~ 313 (337)
T 1pby_B 286 NVSTDGSTVWLGGA-LGDLAAYDA--ETLEK 313 (337)
T ss_dssp EECTTSCEEEEESB-SSEEEEEET--TTCCE
T ss_pred EECCCCCEEEEEcC-CCcEEEEEC--cCCcE
Confidence 99999999998766 999999998 44443
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=4.5e-18 Score=160.86 Aligned_cols=222 Identities=10% Similarity=0.027 Sum_probs=145.0
Q ss_pred CccCCCCceeeeeeCCCCCCCC---CeEEEEeeccccccccccCceEEEEEcC---------CCcEEEEEccCCeeEEEe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVV---SYSCLACGFVGKKRRKERGTLLLALGTS---------NGDILAVDVLTGEMKWKS 68 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~~~~~~~~~l~~g~~---------dg~i~i~d~~~~~~~~~~ 68 (340)
+||+.+|+....+. ++.. .+.+++|||||+ +|++++. ++.|++||+.+++.+...
T Consensus 40 ~~~~~~g~~~~~~~----~~~~~~~~~~~~~~SpDg~---------~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~ 106 (719)
T 1z68_A 40 LYNIETGQSYTILS----NRTMKSVNASNYGLSPDRQ---------FVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN 106 (719)
T ss_dssp EEESSSCCEEEEEC----HHHHHTTTCSEEEECTTSS---------EEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS
T ss_pred EEEcCCCcEEEEEc----cccccccceeeEEECCCCC---------eEEEEecCceeEEeecceEEEEEECCCCccccce
Confidence 58888888765554 3332 489999999999 8888876 789999999998752111
Q ss_pred cCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEe-ecCCCCe-----------------eEEEEccCCCEE
Q 036605 69 TGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREF-KASEKPI-----------------SSSAFLCEEKIF 130 (340)
Q Consensus 69 ~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~i-----------------~~l~~~~~~~~l 130 (340)
. ....+..++|+|||+.|+++. ++.|++|++.+++..... .++...+ .+++|+|||+.|
T Consensus 107 ~--l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~l 183 (719)
T 1z68_A 107 E--LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFL 183 (719)
T ss_dssp C--CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEE
T ss_pred e--cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEE
Confidence 1 234688999999999999875 779999999988765432 2222212 489999999999
Q ss_pred EEecC------------------------------------cEEEEECCCCcee--------EEeecCCCCeEEEEECCC
Q 036605 131 ALASS------------------------------------EVRILSLENGEEV--------LKFSDDVGPLQYVSASDG 166 (340)
Q Consensus 131 ~~~~~------------------------------------~i~i~d~~~~~~~--------~~~~~~~~~v~~~~~s~~ 166 (340)
+++.. +|++||+.+++.. ..+.+|...+..++|+||
T Consensus 184 a~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD 263 (719)
T 1z68_A 184 AYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD 263 (719)
T ss_dssp EEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS
T ss_pred EEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC
Confidence 87431 4889999988642 123457788999999999
Q ss_pred CCEEEEEEcC-C--CeEEEEEcc--CCCCCccCCce-eeecCCCeeee---eecCCCCCCCCEEEE--EeCCC--cEEEE
Q 036605 167 AKIIITAGYG-E--KHLQVWRCD--ISSKTVNKGPA-LSMRHSPVAID---CKNSPNGEDGTVILA--VAESG--VAYSW 233 (340)
Q Consensus 167 ~~~l~s~~~~-d--~~i~iwd~~--~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~l~~--~s~dg--~i~vw 233 (340)
++.+++.... + ..|.+||+. ..+++...... ....+...+.. ....| +|+|..++. ...+| .|++|
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 264 ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVF-SYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEE-CTTSSCEEEEEECTTSCEEEEEE
T ss_pred CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEE-CCCCCeEEEEEEccCCceEEEEE
Confidence 8766664331 2 247777721 14443322221 00133332220 01144 789886554 44555 56777
Q ss_pred ECCCCC
Q 036605 234 DLKTVS 239 (340)
Q Consensus 234 d~~~~~ 239 (340)
++.+++
T Consensus 343 ~~~~~~ 348 (719)
T 1z68_A 343 KDTVEN 348 (719)
T ss_dssp SSCSTT
T ss_pred ECCCCc
Confidence 776644
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.75 E-value=5.1e-16 Score=134.52 Aligned_cols=213 Identities=10% Similarity=0.052 Sum_probs=138.3
Q ss_pred cCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCC----CcEEEEEccC--Cee--EEEecCCCCC
Q 036605 3 STNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSN----GDILAVDVLT--GEM--KWKSTGRHPG 74 (340)
Q Consensus 3 d~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d----g~i~i~d~~~--~~~--~~~~~~~h~~ 74 (340)
|..+|++..... .+...+..++|+|+++ +|++++.+ +.|.+|++.. ++. +..... +..
T Consensus 35 d~~~g~~~~~~~----~~~~~p~~l~~spdg~---------~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-~~~ 100 (361)
T 3scy_A 35 NEETGESLPLSD----AEVANPSYLIPSADGK---------FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-MGA 100 (361)
T ss_dssp ETTTCCEEEEEE----EECSCCCSEEECTTSS---------EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-SSS
T ss_pred eCCCCCEEEeec----ccCCCCceEEECCCCC---------EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-CCC
Confidence 445666554333 1446677899999998 88888875 7999998876 442 233333 455
Q ss_pred CeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCeEEEEe------ec--------CCCCeeEEEEccCCCEEEEec---Cc
Q 036605 75 GLAGLAFAKKGRSLHVVG-TNGMASEMKSEMGEVIREF------KA--------SEKPISSSAFLCEEKIFALAS---SE 136 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~------~~--------~~~~i~~l~~~~~~~~l~~~~---~~ 136 (340)
....+++ +++.|++++ .++.|.+|++.....+..+ .+ +...+.+++|+|+|+++++++ +.
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 6778888 788888776 5789999998754322111 11 122357899999999776633 34
Q ss_pred EEEEECCCCce------e------EEe-ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeee--c
Q 036605 137 VRILSLENGEE------V------LKF-SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSM--R 201 (340)
Q Consensus 137 i~i~d~~~~~~------~------~~~-~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~ 201 (340)
|.+|++..... + ..+ ..+...+..++|+|+|+++++++..++.|.+|+++ .+.......+.. .
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~--~g~~~~~~~~~~~~~ 256 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA--DGMLDEIQTVAADTV 256 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE--TTEEEEEEEEESCSS
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec--CCceEEeEEEecCCC
Confidence 99998875431 1 112 23345678999999999998888668999999984 332211111110 1
Q ss_pred CCCeeeeeecCCCCCCCCEEEEEeCC--CcEEEEECC
Q 036605 202 HSPVAIDCKNSPNGEDGTVILAVAES--GVAYSWDLK 236 (340)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~l~~~s~d--g~i~vwd~~ 236 (340)
+......+ .+ +|+|.+|+++..+ +.|.+|++.
T Consensus 257 ~~~~~~~i--~~-spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 257 NAQGSGDI--HL-SPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCCCEEEE--EE-CTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCCcccE--EE-CCCCCEEEEECCCCCCEEEEEEEc
Confidence 11112222 44 8999998776655 889999986
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=2.7e-16 Score=136.55 Aligned_cols=220 Identities=10% Similarity=0.014 Sum_probs=142.1
Q ss_pred CccCC-CCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceE--EEEEc-------------CCCcEEEEEcc-CCe
Q 036605 1 IWSTN-DGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLL--LALGT-------------SNGDILAVDVL-TGE 63 (340)
Q Consensus 1 vwd~~-~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~--l~~g~-------------~dg~i~i~d~~-~~~ 63 (340)
+||+. +|++....... .+ ..+.+++|+|+++ + ++++. .+|.+.+|++. +++
T Consensus 64 ~~~~~~~g~~~~~~~~~--~~-g~~~~~~~spdg~---------~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~ 131 (365)
T 1jof_A 64 SFAVKSPTEIVHEASHP--IG-GHPRANDADTNTR---------AIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK 131 (365)
T ss_dssp EEEEEETTEEEEEEEEE--CC-SSGGGGCTTSCCE---------EEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC
T ss_pred EEEECCCCCEEEeeEee--cC-CCCccEEECCCCC---------EEEEEEecCCcceeccceeecCCceEEEEccCCCCc
Confidence 47776 77765433211 11 2355689999997 5 33443 68999999997 465
Q ss_pred eEEEec---CCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEeCC-CCeEE--EEee--cCCCCeeEEEEccCCCEEEEec
Q 036605 64 MKWKST---GRHPGGLAGLAFAKKGRSLHVVGT-NGMASEMKSE-MGEVI--REFK--ASEKPISSSAFLCEEKIFALAS 134 (340)
Q Consensus 64 ~~~~~~---~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~wd~~-~~~~~--~~~~--~~~~~i~~l~~~~~~~~l~~~~ 134 (340)
....+. ..+...+.+++|+|+|++|++++. ++.|.+|++. +++.. ..+. .+...+..++|+|+|+++++++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 132 LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence 443332 114567999999999999888764 5799999998 77653 2333 2355689999999999887643
Q ss_pred ---CcEEEEECC--CCcee---EEeec-------CCC------CeEEEE-ECCCCCEEEEEEcCCC-----eEEEEEccC
Q 036605 135 ---SEVRILSLE--NGEEV---LKFSD-------DVG------PLQYVS-ASDGAKIIITAGYGEK-----HLQVWRCDI 187 (340)
Q Consensus 135 ---~~i~i~d~~--~~~~~---~~~~~-------~~~------~v~~~~-~s~~~~~l~s~~~~d~-----~i~iwd~~~ 187 (340)
+.|.+|++. +++.. ..+.. |.. .+..++ |+|||++|+++...++ .|.+|+++.
T Consensus 212 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~ 291 (365)
T 1jof_A 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC
Confidence 458898765 55432 12221 121 478899 9999999887665334 899999942
Q ss_pred CCCCccCCce-ee-ecCCCeeeeeecCCCCC---CCCEEEEEeCC-CcEEEEECCCC
Q 036605 188 SSKTVNKGPA-LS-MRHSPVAIDCKNSPNGE---DGTVILAVAES-GVAYSWDLKTV 238 (340)
Q Consensus 188 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~---~~~~l~~~s~d-g~i~vwd~~~~ 238 (340)
.++...... .. ....+..+ .+ +| +|.+|++++.+ +.|.+|++...
T Consensus 292 -~g~~~~~~~~~~~~~~~~~~~----a~-sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 292 -CGSIEKQLFLSPTPTSGGHSN----AV-SPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -TSCEEEEEEEEECSSCCTTCC----CE-EECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred -CCCEEEeeeeeecCCCCcccc----ee-cCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 333211110 10 01112222 22 67 79999998875 89999998654
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=1.1e-16 Score=157.33 Aligned_cols=209 Identities=11% Similarity=0.046 Sum_probs=151.9
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAF 81 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~ 81 (340)
||..+++.. .+. +|...+.+++|+|+|+ +|++++.++.|++||+.+++....+.. |.+.+.+++|
T Consensus 364 ~d~~~~~~~-~l~----~~~~~~~~~~~SpDG~---------~la~~~~~~~v~~~d~~tg~~~~~~~~-~~~~v~~~~~ 428 (1045)
T 1k32_A 364 YDYRTGKAE-KFE----ENLGNVFAMGVDRNGK---------FAVVANDRFEIMTVDLETGKPTVIERS-REAMITDFTI 428 (1045)
T ss_dssp EETTTCCEE-ECC----CCCCSEEEEEECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCCEEE
T ss_pred EECCCCCce-Eec----CCccceeeeEECCCCC---------EEEEECCCCeEEEEECCCCceEEeccC-CCCCccceEE
Confidence 566666543 233 4668899999999999 899999999999999999987766666 8889999999
Q ss_pred ecCCCEEEEEeCCC----------cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCC----
Q 036605 82 AKKGRSLHVVGTNG----------MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENG---- 145 (340)
Q Consensus 82 ~~~~~~l~s~~~dg----------~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~---- 145 (340)
+|||++|++++.++ .|++||+.+++ ...+..+...+..++|+|+|+.|++.+.. ..+|+....
T Consensus 429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~ 507 (1045)
T 1k32_A 429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF 507 (1045)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC
T ss_pred CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccc
Confidence 99999998887654 89999999887 56677777888999999999988774432 333332111
Q ss_pred ---------------------------------------ceeEEeecCCCCeEEEEECCCCCEEEE------------EE
Q 036605 146 ---------------------------------------EEVLKFSDDVGPLQYVSASDGAKIIIT------------AG 174 (340)
Q Consensus 146 ---------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s------------~~ 174 (340)
..+..+..|.+.+..+.++|++.++++ ..
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~ 587 (1045)
T 1k32_A 508 EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGA 587 (1045)
T ss_dssp CSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCC
T ss_pred ccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccccccc
Confidence 112334456678899999999987775 11
Q ss_pred cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 175 YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 175 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
.....|.+||+ .+++. ..+ . ..+..+ .+ ++||.+|++++.+ .|++||+.+++
T Consensus 588 ~~~~~l~~~d~--~~~~~-~~l----~--~~v~~~--~~-S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 588 PEKGVLLKYDV--KTRKV-TEV----K--NNLTDL--RL-SADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp CCCEEEEEEET--TTCCE-EEE----E--EEEEEE--EE-CTTSCEEEEEETT-SCEEEEESSCT
T ss_pred CCCceEEEEEC--CCCcE-EEe----e--cCcceE--EE-CCCCCEEEEEcCC-cEEEEeCccCc
Confidence 12446677776 44432 111 1 112222 33 8999999998877 69999998876
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=4.1e-16 Score=136.30 Aligned_cols=215 Identities=13% Similarity=0.092 Sum_probs=149.6
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEE-----EEeeccccccccccCceEEEEEcC-CC--cEEEEEccCCeeEEEecCCCC
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSC-----LACGFVGKKRRKERGTLLLALGTS-NG--DILAVDVLTGEMKWKSTGRHP 73 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~-----l~~sp~~~~~~~~~~~~~l~~g~~-dg--~i~i~d~~~~~~~~~~~~~h~ 73 (340)
+|..+|.....++ .+...+.. .+|||||+ +|+.++. +| .|.+||+.+++....... +.
T Consensus 15 ~~~~~g~~~~~lt----~~~~~~~~~~~~~~~~SpDg~---------~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~ 80 (388)
T 3pe7_A 15 QDASTGAQVTRLT----PPDVTCHRNYFYQKCFTRDGS---------KLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RG 80 (388)
T ss_dssp ECTTTCCEEEECS----CTTSCEECCCTTSCCBCTTSC---------EEEEEECTTSSCEEEEEETTTCEEEECCCS-SC
T ss_pred ecCCCCcceEEec----CCcccccchhhcCccCCCCCC---------EEEEEEcCCCCceEEEEeCCCCceEEeeeC-CC
Confidence 3566777777776 44444554 78999998 7888776 66 488899999886655544 65
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEE--EEccCCCEEEEe------------------
Q 036605 74 GGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSS--AFLCEEKIFALA------------------ 133 (340)
Q Consensus 74 ~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l--~~~~~~~~l~~~------------------ 133 (340)
..+..++|+|||+.|+.++.++.|++||+.+++....+..+...+... .++|++..++..
T Consensus 81 ~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 81 DNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp BCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred CCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 566678899999999999999999999999998776666555544333 358999988741
Q ss_pred ------cCcEEEEECCCCceeEEeecCCCCeEEEEECC-CCCEEEEEEcC-----CCeEEEEEccCCCCCccCCceeeec
Q 036605 134 ------SSEVRILSLENGEEVLKFSDDVGPLQYVSASD-GAKIIITAGYG-----EKHLQVWRCDISSKTVNKGPALSMR 201 (340)
Q Consensus 134 ------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~ 201 (340)
...|++||+.+++. ..+..+...+..+.|+| ||+.|+..... ...|.++|+ ..+.. ..+. .
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~--~~~~~-~~l~---~ 233 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE--DGTNM-RKVK---T 233 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET--TSCCC-EESC---C
T ss_pred hhccCCcceEEEEECCCCce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC--CCCce-EEee---e
Confidence 13399999999854 44555667789999999 99988886652 226667775 33322 1111 2
Q ss_pred CCC--eeeeeecCCCCCCCCEEEEEeC-CC----cEEEEECCCCCc
Q 036605 202 HSP--VAIDCKNSPNGEDGTVILAVAE-SG----VAYSWDLKTVSQ 240 (340)
Q Consensus 202 ~~~--~~~~~~~~~~~~~~~~l~~~s~-dg----~i~vwd~~~~~~ 240 (340)
+.. .+... .| +|||..|+..+. ++ .|++||+.+++.
T Consensus 234 ~~~~~~~~~~--~~-spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 234 HAEGESCTHE--FW-VPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CCTTEEEEEE--EE-CTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCcccccc--eE-CCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 221 22222 45 899997765543 22 399999988764
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=3.6e-16 Score=134.40 Aligned_cols=146 Identities=14% Similarity=0.073 Sum_probs=113.0
Q ss_pred EEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEeCCC
Q 036605 26 CLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVV-GTNGMASEMKSEM 104 (340)
Q Consensus 26 ~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~dg~i~~wd~~~ 104 (340)
.++++++++ ++++++.++.|.+||+.+++....+.......+..++|+|+++.++.+ ..++.|.+||+.+
T Consensus 4 g~~~~~~~~---------~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t 74 (349)
T 1jmx_B 4 GPALKAGHE---------YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT 74 (349)
T ss_dssp CCCCCTTCE---------EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cccccCCCE---------EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC
Confidence 456777777 899999999999999999998877765222367899999999876654 4679999999999
Q ss_pred CeEEEEeecCC------CCeeEEEEccCCCEEEEec--------------CcEEEEECCCCcee---EEeecCCCCeEEE
Q 036605 105 GEVIREFKASE------KPISSSAFLCEEKIFALAS--------------SEVRILSLENGEEV---LKFSDDVGPLQYV 161 (340)
Q Consensus 105 ~~~~~~~~~~~------~~i~~l~~~~~~~~l~~~~--------------~~i~i~d~~~~~~~---~~~~~~~~~v~~~ 161 (340)
++.+..+.... ..+..++|+|+|+++++++ +.|.+||+.+++.. ..+. +...+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~ 153 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLM 153 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCE
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccce
Confidence 98877766432 2378899999999998755 66999999885433 3333 34468889
Q ss_pred EECCCCCEEEEEEcCCCeEEEEEc
Q 036605 162 SASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 162 ~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
+|+|+|+ ++++ ++.|.+||+
T Consensus 154 ~~s~dg~-l~~~---~~~i~~~d~ 173 (349)
T 1jmx_B 154 RAADDGS-LYVA---GPDIYKMDV 173 (349)
T ss_dssp EECTTSC-EEEE---SSSEEEECT
T ss_pred eECCCCc-EEEc---cCcEEEEeC
Confidence 9999999 6653 334999998
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=1.7e-16 Score=146.41 Aligned_cols=195 Identities=16% Similarity=0.034 Sum_probs=135.8
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcC-CCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC---CCc
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTS-NGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT---NGM 96 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---dg~ 96 (340)
..+|.+++|+|||+ .||.++. ||++.||++.+++. ..+...+...+..++|+|| +.+++++. +..
T Consensus 21 ~~~~~~~~~~~DG~---------~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD---------KLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQ 89 (582)
T ss_dssp HSCEEEEEEEETTT---------EEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCC
T ss_pred ccchheeecCCCCC---------eEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcc
Confidence 46799999999998 8888876 99999999977764 4555523368999999999 77887765 444
Q ss_pred EEEEeCCC---CeEEEEeecCCCCeeEEEEccCCCEE--EEecC-cEEEEECCCCceeEEeecCCCCeEEEEECCCCCEE
Q 036605 97 ASEMKSEM---GEVIREFKASEKPISSSAFLCEEKIF--ALASS-EVRILSLENGEEVLKFSDDVGPLQYVSASDGAKII 170 (340)
Q Consensus 97 i~~wd~~~---~~~~~~~~~~~~~i~~l~~~~~~~~l--~~~~~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 170 (340)
..+|.+.. +... .+... ..+...+|+|+++.+ +++.. .+.+||+.+++...... +.. .+++|+|||++|
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLI 164 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEE
T ss_pred eEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEE
Confidence 55544322 2222 33322 234567888888643 33333 37799999886544333 333 789999999999
Q ss_pred EEEEcCC----CeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCC--cEEEEECCCCCcc
Q 036605 171 ITAGYGE----KHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESG--VAYSWDLKTVSQD 241 (340)
Q Consensus 171 ~s~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg--~i~vwd~~~~~~~ 241 (340)
++++. + +.|++||+ .+++.. .+. .+....... .| +|||.+|+++..+| .|++||+.+++..
T Consensus 165 a~~~~-~~~~~~~i~~~d~--~~g~~~-~l~---~~~~~~~~~--~~-SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 165 AGLGF-FGGGRVSLFTSNL--SSGGLR-VFD---SGEGSFSSA--SI-SPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEE-EETTEEEEEEEET--TTCCCE-EEC---CSSCEEEEE--EE-CTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred EEEEE-cCCCCeEEEEEcC--CCCCce-Eee---cCCCccccc--eE-CCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 98776 5 67899997 444332 222 444444444 66 89999999888888 8999999876543
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.71 E-value=3.7e-17 Score=154.62 Aligned_cols=198 Identities=10% Similarity=-0.004 Sum_probs=136.3
Q ss_pred EEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCC---CeEEEEEecCCCEEEEEeC---------
Q 036605 26 CLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPG---GLAGLAFAKKGRSLHVVGT--------- 93 (340)
Q Consensus 26 ~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~--------- 93 (340)
.++|+|+++ +++++ .|++|++||+.+++....+.. |.. .+.+++|+|||+.|++++.
T Consensus 20 ~~~~s~dg~---------~~~~~-~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 20 FPNWISGQE---------YLHQS-ADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCEESSSSE---------EEEEC-TTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccEECCCCe---------EEEEc-CCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEEeec
Confidence 689999998 66655 699999999999987665554 432 4899999999999998876
Q ss_pred CCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEE-ecCcEEEEECCCCceeEEe-ecCCCCe-------------
Q 036605 94 NGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFAL-ASSEVRILSLENGEEVLKF-SDDVGPL------------- 158 (340)
Q Consensus 94 dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~~~~i~i~d~~~~~~~~~~-~~~~~~v------------- 158 (340)
++.|++||+.+++.+.... ....+..++|+|||+.|+. .+++|++||+.+++..... .++...+
T Consensus 89 ~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred ceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeec
Confidence 6899999999987631111 1246889999999998876 5556999999888654322 2222212
Q ss_pred ----EEEEECCCCCEEEEEEcCCC---------------------------------eEEEEEccCCCCCccCCceee--
Q 036605 159 ----QYVSASDGAKIIITAGYGEK---------------------------------HLQVWRCDISSKTVNKGPALS-- 199 (340)
Q Consensus 159 ----~~~~~s~~~~~l~s~~~~d~---------------------------------~i~iwd~~~~~~~~~~~~~~~-- 199 (340)
..++|+|||++|++++..++ .|++||+ .+++......+.
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~--~~~~~~~~~~~~~~ 245 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT--TYPAYVGPQEVPVP 245 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES--SCHHHHCCEECCCC
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC--CCCCccceeEccCC
Confidence 48999999999999776221 7888998 343321000100
Q ss_pred ---ecCCCeeeeeecCCCCCCCCEEEEEeCC----CcEEEEE----CCCCCc
Q 036605 200 ---MRHSPVAIDCKNSPNGEDGTVILAVAES----GVAYSWD----LKTVSQ 240 (340)
Q Consensus 200 ---~~~~~~~~~~~~~~~~~~~~~l~~~s~d----g~i~vwd----~~~~~~ 240 (340)
..+...+..+ .| +||+.++++.... ..|++|| ..+++.
T Consensus 246 ~~~~~~~~~~~~~--~~-SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 246 AMIASSDYYFSWL--TW-VTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp HHHHTSCEEEEEE--EE-SSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred ccCCCCcceEEEe--EE-eCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 0233344444 56 8888777664433 2488899 666443
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=7.5e-16 Score=146.04 Aligned_cols=200 Identities=10% Similarity=-0.014 Sum_probs=138.8
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCC-----eEEEEEecCCCEEEEEeCC--
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGG-----LAGLAFAKKGRSLHVVGTN-- 94 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~d-- 94 (340)
....+++|+|+++ +++++ ||+|++||+.+++....+.+ |... ...++|||||+.|++++.+
T Consensus 17 ~~~~~~~w~~dg~---------~~~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 17 LKLYSLRWISDHE---------YLYKQ--ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CCCCCEEECSSSE---------EEEEE--TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEE
T ss_pred ccccccEECCCCc---------EEEEc--CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEEEEECCee
Confidence 3456899999999 88886 99999999999987766665 5432 2458999999999998876
Q ss_pred -------CcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEE-ecCcEEEEECCCCceeEE-eecCCCCe-------
Q 036605 95 -------GMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFAL-ASSEVRILSLENGEEVLK-FSDDVGPL------- 158 (340)
Q Consensus 95 -------g~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~~~~i~i~d~~~~~~~~~-~~~~~~~v------- 158 (340)
+.+.+||+.+++.. .+..+...+..++|||||+.|+. .+++|++||+.+++..+. ..++...+
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDW 163 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCH
T ss_pred eEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccc
Confidence 56779999998854 46666778999999999998876 556699999988764431 12222222
Q ss_pred ----------EEEEECCCCCEEEEEEcCCC-----------------------------------eEEEEEccCCC---C
Q 036605 159 ----------QYVSASDGAKIIITAGYGEK-----------------------------------HLQVWRCDISS---K 190 (340)
Q Consensus 159 ----------~~~~~s~~~~~l~s~~~~d~-----------------------------------~i~iwd~~~~~---~ 190 (340)
..+.|||||++|+.....+. .|.+||+ .+ +
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~--~~~~~~ 241 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT--DSLSSV 241 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET--TSCCSS
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC--CCCCCC
Confidence 35899999999998764233 4666666 23 2
Q ss_pred CccCCceeee-----cCCCeeeeeecCCCCCCCCEEEEEeC----CCcEEEEECCCCC
Q 036605 191 TVNKGPALSM-----RHSPVAIDCKNSPNGEDGTVILAVAE----SGVAYSWDLKTVS 239 (340)
Q Consensus 191 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~s~----dg~i~vwd~~~~~ 239 (340)
+......+.. .+...+..+ .| +|||..++.... +..|++||+.+++
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~--~w-spdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDV--TW-ATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEE--EE-EETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CcceEEEecCCccCCCCCeEEEEE--EE-eCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 1101111111 133334444 66 799986665533 3379999988765
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.4e-14 Score=123.85 Aligned_cols=218 Identities=14% Similarity=0.105 Sum_probs=148.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-eEEEec--------CC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-MKWKST--------GR 71 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~--------~~ 71 (340)
+||..+|+++..+. ..+-.....++++|+++ ++++...++.|++||..... .+..+. ..
T Consensus 73 ~~d~~~g~~~~~~~---~~~~~~p~gia~d~~g~---------l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~ 140 (329)
T 3fvz_A 73 VIDPNNAEILQSSG---KNLFYLPHGLSIDTDGN---------YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQN 140 (329)
T ss_dssp EECTTTCCEEEEEC---TTTCSSEEEEEECTTSC---------EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTT
T ss_pred EEECCCCeEEeccC---CCccCCceEEEECCCCC---------EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCcc
Confidence 36777788776554 23446788999999999 89999999999999976542 444442 12
Q ss_pred CCCCeEEEEEec-CCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCC----------CCeeEEEEccC-CCEEEEe--cCc
Q 036605 72 HPGGLAGLAFAK-KGRSLHVVG-TNGMASEMKSEMGEVIREFKASE----------KPISSSAFLCE-EKIFALA--SSE 136 (340)
Q Consensus 72 h~~~v~~v~~~~-~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~----------~~i~~l~~~~~-~~~l~~~--~~~ 136 (340)
+......++++| ++..+++.+ .++.|.+|+ .++..+..+.... .....++++|+ +.++++. ++.
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~ 219 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR 219 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE
Confidence 455789999999 677777665 589999999 5677776664322 23789999999 5555553 334
Q ss_pred EEEEECCCCceeEEee--cCCCCeEEEEECCCCCEEEEEE------cCCCeEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 137 VRILSLENGEEVLKFS--DDVGPLQYVSASDGAKIIITAG------YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 137 i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
|++||..+++.+..+. .+...+..++|+| +..+.+.+ ..+..|.+|++ .+++....+.....+......
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~--~~g~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNF--SSGEIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEET--TTCCEEEEECCSSSCCSSEEE
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEc--CCCeEEEEEcCCCCccCCeeE
Confidence 9999999888887773 4556788999999 43333321 11458999997 444433221100122222233
Q ss_pred eecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 209 CKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+ ++ +++|..+++...++.|++|++..
T Consensus 297 i--a~-~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 297 I--VA-SEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp E--EE-CTTSEEEEEESSSCCEEEEEEEE
T ss_pred E--EE-CCCCCEEEEECCCCEEEEEeCCc
Confidence 3 33 78998888888899999999865
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=3.2e-15 Score=141.71 Aligned_cols=222 Identities=11% Similarity=0.049 Sum_probs=148.7
Q ss_pred CccCCCCceeeeeeCCCCCCCC-----CeEEEEeeccccccccccCceEEEEEcCC---------CcEEEEEccCCeeEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVV-----SYSCLACGFVGKKRRKERGTLLLALGTSN---------GDILAVDVLTGEMKW 66 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~-----~v~~l~~sp~~~~~~~~~~~~~l~~g~~d---------g~i~i~d~~~~~~~~ 66 (340)
+||+.+|+....+. +|.. ....++|||||+ +|+.++.+ +.+.+||+.+++..
T Consensus 40 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Spdg~---------~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~- 105 (740)
T 4a5s_A 40 VFNAEYGNSSVFLE----NSTFDEFGHSINDYSISPDGQ---------FILLEYNYVKQWRHSYTASYDIYDLNKRQLI- 105 (740)
T ss_dssp EEETTTCCEEEEEC----TTTTTTCCSCCCEEEECTTSS---------EEEEEEEEEECSSSCEEEEEEEEETTTTEEC-
T ss_pred EEECCCCceEEEEe----chhhhhhcccccceEECCCCC---------EEEEEECCeeeEEEccceEEEEEECCCCcEE-
Confidence 58999998766555 3332 234488999999 88888876 66789999999754
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEe-ecCCCCe-----------------eEEEEccCCC
Q 036605 67 KSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREF-KASEKPI-----------------SSSAFLCEEK 128 (340)
Q Consensus 67 ~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~i-----------------~~l~~~~~~~ 128 (340)
.+.. |.+.+..++|||||+.|+.+ .++.|++|++.+++..... .++...+ ..+.|||||+
T Consensus 106 ~l~~-~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~ 183 (740)
T 4a5s_A 106 TEER-IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT 183 (740)
T ss_dssp CSSC-CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS
T ss_pred Eccc-CCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCC
Confidence 5665 78899999999999999987 4679999999988754321 2222212 3589999999
Q ss_pred EEEEec---C-----------------------------------cEEEEECCC---Cc--eeEEee------cCCCCeE
Q 036605 129 IFALAS---S-----------------------------------EVRILSLEN---GE--EVLKFS------DDVGPLQ 159 (340)
Q Consensus 129 ~l~~~~---~-----------------------------------~i~i~d~~~---~~--~~~~~~------~~~~~v~ 159 (340)
.|+... . +|++||+.+ ++ ....+. +|...+.
T Consensus 184 ~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 184 FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEE
T ss_pred EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEE
Confidence 987631 0 378899988 73 223333 3777899
Q ss_pred EEEECCCCCEEEEEEcC---CCeEEEEEccCCCCC----ccCCc-eeeecCCCeee---eeecCCCCCCCCEEE-EEeC-
Q 036605 160 YVSASDGAKIIITAGYG---EKHLQVWRCDISSKT----VNKGP-ALSMRHSPVAI---DCKNSPNGEDGTVIL-AVAE- 226 (340)
Q Consensus 160 ~~~~s~~~~~l~s~~~~---d~~i~iwd~~~~~~~----~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~l~-~~s~- 226 (340)
.++|+|||+.++..... +..|.+||+. +++ ..... .+...+..++. .....| +|||..++ ..+.
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~--tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f-spDG~~l~~~~s~~ 340 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYD--ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF-TLDGNSFYKIISNE 340 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEE--TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE-CTTSSEEEEEEECT
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECC--CCccccceeEEEEeeeccCCceEccCcCCCceE-cCCCCEEEEEEEcC
Confidence 99999999876654432 3478999984 443 11111 11123333322 111245 89999877 6653
Q ss_pred CC--cEEEEECCCCCcc
Q 036605 227 SG--VAYSWDLKTVSQD 241 (340)
Q Consensus 227 dg--~i~vwd~~~~~~~ 241 (340)
+| .|++|++..+...
T Consensus 341 ~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 341 EGYRHICYFQIDKKDCT 357 (740)
T ss_dssp TSCEEEEEEETTCSSCE
T ss_pred CCceEEEEEECCCCceE
Confidence 33 5888888765443
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=1.7e-13 Score=114.60 Aligned_cols=214 Identities=14% Similarity=0.179 Sum_probs=143.6
Q ss_pred ccCCCCceeeeeeCCC--CCCCCCeEEEEee-ccccccccccCceEEEEEcC-CCcEEEEEccCCeeEEEecCCCCCCeE
Q 036605 2 WSTNDGSLLAEWKQPD--GEPVVSYSCLACG-FVGKKRRKERGTLLLALGTS-NGDILAVDVLTGEMKWKSTGRHPGGLA 77 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~--~~~~~~v~~l~~s-p~~~~~~~~~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~h~~~v~ 77 (340)
||.. |.....+.... ..+...+.++++. ++++ ++++... ++.|.+|| .+++.+..+...+...+.
T Consensus 56 ~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~---------l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~ 124 (286)
T 1q7f_A 56 FDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD---------IIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPR 124 (286)
T ss_dssp ECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE---------EEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEE
T ss_pred ECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe---------EEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCce
Confidence 5655 55554443210 1244578899994 6777 6666543 88999999 567767666543556789
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEee--cCCCCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeec
Q 036605 78 GLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFK--ASEKPISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSD 153 (340)
Q Consensus 78 ~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~ 153 (340)
+++++++|+.+++...++.|.+||.. ++.+..+. .+...+..++++|+++++++. ++.|++||.. ++.+..+..
T Consensus 125 ~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 202 (286)
T 1q7f_A 125 GVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGG 202 (286)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESC
T ss_pred EEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEcc
Confidence 99999999877776778899999964 56665554 334568999999999877764 4459999974 455666643
Q ss_pred C--CCCeEEEEECCCCCEEEEEEcCCC-eEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcE
Q 036605 154 D--VGPLQYVSASDGAKIIITAGYGEK-HLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVA 230 (340)
Q Consensus 154 ~--~~~v~~~~~s~~~~~l~s~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i 230 (340)
+ ...+..++++++|..+++... ++ .|.+|+. .++....+... ........+ .+ .++|.++++ +.++.|
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~-~~~~i~~~~~---~g~~~~~~~~~-~~~~~~~~i--~~-~~~g~l~vs-~~~~~v 273 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNH-NNFNLTIFTQ---DGQLISALESK-VKHAQCFDV--AL-MDDGSVVLA-SKDYRL 273 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECS-SSCEEEEECT---TSCEEEEEEES-SCCSCEEEE--EE-ETTTEEEEE-ETTTEE
T ss_pred CCccCCCcEEEECCCCCEEEEeCC-CCEEEEEECC---CCCEEEEEccc-CCCCcceeE--EE-CCCCcEEEE-CCCCeE
Confidence 3 357889999999977776544 65 9999995 33332222211 111112222 33 678876666 679999
Q ss_pred EEEECCC
Q 036605 231 YSWDLKT 237 (340)
Q Consensus 231 ~vwd~~~ 237 (340)
++|++..
T Consensus 274 ~v~~~~~ 280 (286)
T 1q7f_A 274 YIYRYVQ 280 (286)
T ss_dssp EEEECSC
T ss_pred EEEEccc
Confidence 9999754
No 168
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=1.7e-13 Score=117.01 Aligned_cols=214 Identities=12% Similarity=0.042 Sum_probs=151.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCC----CCCe
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRH----PGGL 76 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h----~~~v 76 (340)
+||+.+++++.++. .......++++++++ ++++...++.|.+||..+++....+.... ....
T Consensus 68 viD~~t~~~~~~i~-----~~~~p~~i~~~~~g~---------lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 68 AIDINTFKEVGRIT-----GFTSPRYIHFLSDEK---------AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEETTTCCEEEEEE-----CCSSEEEEEEEETTE---------EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred EEECcccEEEEEcC-----CCCCCcEEEEeCCCe---------EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 47888999888875 235678999999888 66666589999999999998777665411 1145
Q ss_pred EEEEEecCCCEEEEEe--CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec------------CcEEEEEC
Q 036605 77 AGLAFAKKGRSLHVVG--TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS------------SEVRILSL 142 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~------------~~i~i~d~ 142 (340)
..+++ ++..|+.++ .++.|.++|+.+++.+..+.... ....++++|+|++++++. +.|.++|.
T Consensus 134 ~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 134 EQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp CCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred ceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence 56777 355666665 47899999999999888776543 457899999999887743 35999999
Q ss_pred CCCceeEEeecC-CCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeee-cCCCeeeeeecCCCCC-CCC
Q 036605 143 ENGEEVLKFSDD-VGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSM-RHSPVAIDCKNSPNGE-DGT 219 (340)
Q Consensus 143 ~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~ 219 (340)
.+++....+... ......++|+|++++++++ . +.|.+||. .+++......+.. ...+..+.+ +| ++.
T Consensus 211 ~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~-~--~~v~~~d~--~t~~~~~~~~~~~~~~~p~gi~v-----dp~~g~ 280 (328)
T 3dsm_A 211 ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI-N--NDIWRMPV--EADRVPVRPFLEFRDTKYYGLTV-----NPNNGE 280 (328)
T ss_dssp TTTEEEEEEECCTTCCCEEEEECTTSCEEEEE-S--SSEEEEET--TCSSCCSSCSBCCCSSCEEEEEE-----CTTTCC
T ss_pred CCCeEEEEEecCCCCCceeEEEecCCCEEEEE-c--cEEEEEEC--CCCceeeeeeecCCCCceEEEEE-----cCCCCe
Confidence 999877666532 2367899999999988884 3 38888887 4444322111111 122333334 66 566
Q ss_pred EEEEE----eCCCcEEEEECCCCCccC
Q 036605 220 VILAV----AESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 220 ~l~~~----s~dg~i~vwd~~~~~~~~ 242 (340)
.+++. ..++.|.+||.. ++.+.
T Consensus 281 lyva~~~~y~~~~~V~v~d~~-g~~~~ 306 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQ-GKLID 306 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTT-CCEEE
T ss_pred EEEEcccccccCCEEEEECCC-CCEEE
Confidence 66665 578899999987 65554
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=7.1e-15 Score=137.61 Aligned_cols=198 Identities=10% Similarity=0.044 Sum_probs=129.4
Q ss_pred EEEee--ccccccccccCceE-EEEEcC-CCcEEEEEcc--C-CeeEEEecCC----CCCCeEEEEEecCCCEEEEEeCC
Q 036605 26 CLACG--FVGKKRRKERGTLL-LALGTS-NGDILAVDVL--T-GEMKWKSTGR----HPGGLAGLAFAKKGRSLHVVGTN 94 (340)
Q Consensus 26 ~l~~s--p~~~~~~~~~~~~~-l~~g~~-dg~i~i~d~~--~-~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~~~d 94 (340)
...|+ ||++ . |+.++. +..|+++++. . ++ ...+... |...+..++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~---------~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~ 150 (662)
T 3azo_A 81 PWAGVPRPAGG---------PLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEE 150 (662)
T ss_dssp CEEEECCSSSS---------CEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEE
T ss_pred cceeeeecCCC---------eEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEec
Confidence 55565 9998 6 666553 5677777765 3 43 4455441 45678999999999999988876
Q ss_pred ----------CcEEEEeCCC------CeEEEEee-cCCCCeeEEEEccCCCEEEEec----------CcEEEEECC-CC-
Q 036605 95 ----------GMASEMKSEM------GEVIREFK-ASEKPISSSAFLCEEKIFALAS----------SEVRILSLE-NG- 145 (340)
Q Consensus 95 ----------g~i~~wd~~~------~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~----------~~i~i~d~~-~~- 145 (340)
..|++||+.+ ++. ..+. .+...+..++|+|||++|+..+ .+|++||+. ++
T Consensus 151 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 151 FTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp ECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred ccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 5899999988 554 3444 5556788899999999987632 249999998 56
Q ss_pred --ceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCcee--eecCCCe---eeeeecCCCCCCC
Q 036605 146 --EEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPAL--SMRHSPV---AIDCKNSPNGEDG 218 (340)
Q Consensus 146 --~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~ 218 (340)
+.......+...+..+.|+|||++++++ ..++...||.++..+++....... ....+.+ ...+ .+ ++++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~spdg~l~~~~-~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~--~~-~~~~ 305 (662)
T 3azo_A 230 FADTRTLLGGPEEAIAQAEWAPDGSLIVAT-DRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF--AP-LANG 305 (662)
T ss_dssp EEEEEEEEEETTBCEEEEEECTTSCEEEEE-CTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE--EE-CTTS
T ss_pred ccccEEeCCCCCceEcceEECCCCeEEEEE-CCCCCeEEEEEECCCCceeecccccccccCccccccCceE--eE-eCCC
Confidence 3333334557889999999999955554 447855555553334332211110 0001111 0111 22 5788
Q ss_pred CEEEEEeCCCcEEEE--ECCCCC
Q 036605 219 TVILAVAESGVAYSW--DLKTVS 239 (340)
Q Consensus 219 ~~l~~~s~dg~i~vw--d~~~~~ 239 (340)
.++++++. +.++|| |+.+++
T Consensus 306 ~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 306 LIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp CEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEEEEEc-CccEEEEEECCCCc
Confidence 99999988 999999 554433
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.64 E-value=8.8e-15 Score=127.83 Aligned_cols=219 Identities=8% Similarity=-0.034 Sum_probs=141.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+||+.+|+...... ++...+..++|+||++ .|+.++.++.|++||+.+++....+.. +.+.+....
T Consensus 64 ~~d~~~g~~~~lt~----~~~~~~~~~~~spdg~---------~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~ 129 (388)
T 3pe7_A 64 LLDLNTQVATQLTE----GRGDNTFGGFLSPDDD---------ALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGT 129 (388)
T ss_dssp EEETTTCEEEECCC----SSCBCSSSCEECTTSS---------EEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEE
T ss_pred EEeCCCCceEEeee----CCCCCccceEEcCCCC---------EEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccc
Confidence 35777777654433 4455555678999999 899999999999999999986655554 555554444
Q ss_pred --EecCCCEEEEE----------------------eCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEcc-CCCEEEEec-
Q 036605 81 --FAKKGRSLHVV----------------------GTNGMASEMKSEMGEVIREFKASEKPISSSAFLC-EEKIFALAS- 134 (340)
Q Consensus 81 --~~~~~~~l~s~----------------------~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~- 134 (340)
+++++..++.. +.+..|.+||+.+++... +..+...+..++|+| +|+.++...
T Consensus 130 ~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 130 WVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp EEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEEC
T ss_pred eeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEe
Confidence 48899988743 234689999999987544 444566789999999 999886522
Q ss_pred -------CcEEEEECCCCceeEEeecCC--CCeEEEEECCCCCEEEEEEcCCC----eEEEEEccCCCCCccCCceeeec
Q 036605 135 -------SEVRILSLENGEEVLKFSDDV--GPLQYVSASDGAKIIITAGYGEK----HLQVWRCDISSKTVNKGPALSMR 201 (340)
Q Consensus 135 -------~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~ 201 (340)
..|+++|+..+. ...+..+. ..+..+.|+|||+.|+..+..++ .|.+||+ .+++......+. .
T Consensus 209 ~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~--~~g~~~~l~~~~-~ 284 (388)
T 3pe7_A 209 GPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP--ETLENRQLTSMP-A 284 (388)
T ss_dssp SCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT--TTCCEEEEEEEC-C
T ss_pred cCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec--CCCceEEEEcCC-C
Confidence 148888887664 34444444 35778899999998866554222 3889998 444321111110 0
Q ss_pred CCCeeeeee-cCCCCCCCCEEEEE---------eCCCcEEEEECCCCC
Q 036605 202 HSPVAIDCK-NSPNGEDGTVILAV---------AESGVAYSWDLKTVS 239 (340)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~l~~~---------s~dg~i~vwd~~~~~ 239 (340)
+........ ..| +|+|..|+.. ..+..|++||+.+++
T Consensus 285 ~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 285 CSHLMSNYDGSLM-VGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEECTTSSEE-EEEECCC------------CCCCEEEEEETTTTE
T ss_pred ceeeeecCCCCeE-ccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 000000000 023 7888877754 456689999998754
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.61 E-value=4.1e-15 Score=130.12 Aligned_cols=219 Identities=12% Similarity=0.003 Sum_probs=140.4
Q ss_pred ccCCCCceeeeeeCCC-CCCCCCeEEEEeeccccccccccCceEEEEEcCC---CcEEEEEccCCeeEEEecCCCCCCeE
Q 036605 2 WSTNDGSLLAEWKQPD-GEPVVSYSCLACGFVGKKRRKERGTLLLALGTSN---GDILAVDVLTGEMKWKSTGRHPGGLA 77 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d---g~i~i~d~~~~~~~~~~~~~h~~~v~ 77 (340)
.|..+|..+..+.... ..+...+.+++|||+|+ +|+..... ..|++||+.+++.. .+...+.....
T Consensus 15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~---------~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~ 84 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGK---------KLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTF 84 (396)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSC---------EEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTT
T ss_pred ecCCCCcceEEEecCCCCccceeeecCcCCCCCC---------EEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccc
Confidence 3677887776666220 01122377889999998 77666433 47888999888754 34431332233
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeE-------------------EEEccCCCEEEEe-----
Q 036605 78 GLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISS-------------------SAFLCEEKIFALA----- 133 (340)
Q Consensus 78 ~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~-------------------l~~~~~~~~l~~~----- 133 (340)
.+.|+|||+.|+.++.++.|++||+.+++.......+...... +.++|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 4789999999999999999999999988766555433332222 3456777766542
Q ss_pred cC--cEEEEECCCCceeEEeecCCCCeEEEEECC-CCCEEEEEEcCC-----CeEEEEEccCCCCCccCCceeeecCC-C
Q 036605 134 SS--EVRILSLENGEEVLKFSDDVGPLQYVSASD-GAKIIITAGYGE-----KHLQVWRCDISSKTVNKGPALSMRHS-P 204 (340)
Q Consensus 134 ~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~-~ 204 (340)
+. .|++||+.+++.... ..+...+..+.|+| ++..|+..+... ..|.+|++ ..+... .+. .+. .
T Consensus 165 ~~~~~l~~~d~~~g~~~~~-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~--~~~~~~-~l~---~~~~~ 237 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVI-HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNE--DGSNVR-KIK---EHAEG 237 (396)
T ss_dssp CCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEET--TSCCCE-ESS---CCCTT
T ss_pred CCcceEEEEECCCCcEEee-ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEEC--CCCcee-Eee---ccCCC
Confidence 22 399999998865433 34567789999999 788777655422 35777776 333211 111 111 1
Q ss_pred -eeeeeecCCCCCCCCEEEEEeCC-----CcEEEEECCCCCc
Q 036605 205 -VAIDCKNSPNGEDGTVILAVAES-----GVAYSWDLKTVSQ 240 (340)
Q Consensus 205 -~~~~~~~~~~~~~~~~l~~~s~d-----g~i~vwd~~~~~~ 240 (340)
.+..+ .| +|+|.+|+.++.+ +.|++||+.+++.
T Consensus 238 ~~~~~~--~~-spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 238 ESCTHE--FW-IPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp EEEEEE--EE-CTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred ccccce--EE-CCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 22222 45 8999988777554 4499999987653
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.61 E-value=1.1e-13 Score=119.83 Aligned_cols=216 Identities=10% Similarity=0.039 Sum_probs=138.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc----------CCCcEEEEEccCCeeEEEecC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT----------SNGDILAVDVLTGEMKWKSTG 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~----------~dg~i~i~d~~~~~~~~~~~~ 70 (340)
+||+.+++++..+. .+..+ .++|+|+++ +|+++. .++.|.+||..+++.+..+..
T Consensus 35 v~D~~t~~~~~~i~----~g~~p--~i~~spdg~---------~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~ 99 (361)
T 2oiz_A 35 VYDYTNGKFLGMVP----TAFNG--HVQVSNDGK---------KIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISL 99 (361)
T ss_dssp EEETTTCCEEEEEE----CCEEE--EEEECTTSS---------EEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEE
T ss_pred EEECCCCeEEEEec----CCCCC--ceEECCCCC---------EEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEc
Confidence 47888998887776 33334 899999998 788775 367799999999887777653
Q ss_pred C-----CCCCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCeEEEE-eecCCC---------CeeEEEEccCCCEEEE-
Q 036605 71 R-----HPGGLAGLAFAKKGRSLHVVGT--NGMASEMKSEMGEVIRE-FKASEK---------PISSSAFLCEEKIFAL- 132 (340)
Q Consensus 71 ~-----h~~~v~~v~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~-~~~~~~---------~i~~l~~~~~~~~l~~- 132 (340)
. +......++|+|||++|+++.. ++.|.+||+.+++.+.. +..... ...-++++++|.+++.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEE
T ss_pred CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEE
Confidence 1 1245678999999999999874 57999999999988776 432110 0111333333333321
Q ss_pred ---------------------------------------ecCcEEEEECCCCcee--EEeecC----------CCCeEEE
Q 036605 133 ---------------------------------------ASSEVRILSLENGEEV--LKFSDD----------VGPLQYV 161 (340)
Q Consensus 133 ---------------------------------------~~~~i~i~d~~~~~~~--~~~~~~----------~~~v~~~ 161 (340)
.++.+.++|+...... ..+... ......+
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 180 LGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp ECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred ECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 1112455555433211 111100 0111237
Q ss_pred EECCCCCEEEEEEc----------CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEE
Q 036605 162 SASDGAKIIITAGY----------GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAY 231 (340)
Q Consensus 162 ~~s~~~~~l~s~~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~ 231 (340)
+|+|++..++++.. ..+.|.+||+ .+++....+ ..+. +..+.+ +|+|.+|++++. +.|.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~--~t~~~v~~i--~~~~-p~~ia~-----spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT--KTKQRVARI--PGRD-ALSMTI-----DQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET--TTTEEEEEE--ECTT-CCEEEE-----ETTTTEEEEECS-SCEE
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEEC--CCCcEEEEE--ecCC-eeEEEE-----CCCCCEEEEeCC-CeEE
Confidence 89999888887543 1348999998 555544333 2344 555555 899999998887 9999
Q ss_pred EEECCCC--CccC
Q 036605 232 SWDLKTV--SQDE 242 (340)
Q Consensus 232 vwd~~~~--~~~~ 242 (340)
+||..++ +.+.
T Consensus 329 v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 329 VYDISQPEPKLLR 341 (361)
T ss_dssp EEECSSSSCEEEE
T ss_pred EEECCCCcceeeE
Confidence 9999987 5544
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=1e-12 Score=112.28 Aligned_cols=202 Identities=13% Similarity=0.113 Sum_probs=139.1
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC----C
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN----G 95 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----g 95 (340)
+...+.+++|+|+++ +++++..++.|.+||..+++....... +...+.+++|+++++++++...+ +
T Consensus 43 ~~~~~~~~~~~~~g~---------l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQ---------LFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTG 112 (333)
T ss_dssp SCCCEEEEEECTTSC---------EEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred cCccccCcEECCCCC---------EEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCc
Confidence 445678999999999 888899999999999988876544434 66789999999999877776666 6
Q ss_pred cEEEEeCCCCeEEEEee--cCCCCeeEEEEccCCCEEEEecC--------cEEEEECCCCceeEEeecCCCCeEEEEECC
Q 036605 96 MASEMKSEMGEVIREFK--ASEKPISSSAFLCEEKIFALASS--------EVRILSLENGEEVLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~--------~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 165 (340)
.|.+||..++.....+. .....+..++++|+|+++++... .|..+|..+++.. .+......+..++|+|
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PIIQNISVANGIALST 191 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE-EeecCCCcccceEECC
Confidence 89999998876543332 23456889999999998877542 3667776655433 3322334578899999
Q ss_pred CCCEEEEEEcCCCeEEEEEccCCCCCccCCc----eeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 166 GAKIIITAGYGEKHLQVWRCDISSKTVNKGP----ALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 166 ~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
++++++.+...++.|.+|+++. .+.....+ ............+ .+ .++|.++++...++.|.+||..
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~-~g~~~~~~~~~~~~~~~~~~~~~~i--~~-d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALED-DGVTIQPFGATIPYYFTGHEGPDSC--CI-DSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECT-TSSSEEEEEEEEEEECCSSSEEEEE--EE-BTTCCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEeCCCCeEEEEEecC-CCcCcccccceEEEecCCCCCCCce--EE-CCCCCEEEEEcCCCEEEEECCC
Confidence 9987776665578999999842 12211110 0011110122222 33 6788877777778899999874
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.60 E-value=3.5e-14 Score=132.94 Aligned_cols=158 Identities=8% Similarity=-0.006 Sum_probs=115.5
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCC----------CcEEEEEccC------CeeEEEec-CCCCCCeEEEEEe
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSN----------GDILAVDVLT------GEMKWKST-GRHPGGLAGLAFA 82 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d----------g~i~i~d~~~------~~~~~~~~-~~h~~~v~~v~~~ 82 (340)
+...+.+++|||||+ .|++++.+ ..|++||+.+ ++. ..+. . +...+..++|+
T Consensus 128 ~~~~~~~~~~spDg~---------~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~S 196 (662)
T 3azo_A 128 GGLRWADPVLLPERG---------EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDD-AHRFVTGPRLS 196 (662)
T ss_dssp TCEEEEEEEEETTTT---------EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCS-CSSEECCCEEC
T ss_pred CCccccCcEECCCCC---------EEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEec-CCCcccCceEC
Confidence 567889999999998 88888776 5899999988 554 4555 4 56678889999
Q ss_pred cCCCEEEEEeCC--------CcEEEEeCC-CC---eEEEEeecCCCCeeEEEEccCCCEEEEecC----cEEEEECCCCc
Q 036605 83 KKGRSLHVVGTN--------GMASEMKSE-MG---EVIREFKASEKPISSSAFLCEEKIFALASS----EVRILSLENGE 146 (340)
Q Consensus 83 ~~~~~l~s~~~d--------g~i~~wd~~-~~---~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~----~i~i~d~~~~~ 146 (340)
|||+.|+.++.+ ..|.+||+. ++ +.......+...+..++|+|||+++++++. .|++||+.+++
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 999999887755 379999998 57 444444445678899999999997766543 37788876775
Q ss_pred eeEEeecCCCC--------eEEEEECCCCCEEEEEEcCCCeEEEEEccCCCC
Q 036605 147 EVLKFSDDVGP--------LQYVSASDGAKIIITAGYGEKHLQVWRCDISSK 190 (340)
Q Consensus 147 ~~~~~~~~~~~--------v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~ 190 (340)
.......+... +..++|+|++..++++ .. +.++||.++...+
T Consensus 277 ~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 277 ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH-GK-GAAVLGILDPESG 326 (662)
T ss_dssp EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE-BS-SSCEEEEEETTTT
T ss_pred eeecccccccccCccccccCceEeEeCCCEEEEEE-Ec-CccEEEEEECCCC
Confidence 44333322221 5678899999877774 44 8889996643443
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=1.6e-13 Score=114.09 Aligned_cols=183 Identities=12% Similarity=0.130 Sum_probs=139.4
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCC-CCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC-CCeeEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHP-GGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE-KPISSS 121 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-~~i~~l 121 (340)
+|++++.++.|.+||.++|+.++++.. +. ..+.++.++|+|+.|+ +.++.|..||. +|+.+..+..+. ..+.++
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEEC-CTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCC-CccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 799999999999999999999999987 54 4789999999999888 45778999999 899998888653 468899
Q ss_pred EEccCCCEEEEecC-c--EEEEECCCCceeEEeec------CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc
Q 036605 122 AFLCEEKIFALASS-E--VRILSLENGEEVLKFSD------DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV 192 (340)
Q Consensus 122 ~~~~~~~~l~~~~~-~--i~i~d~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~ 192 (340)
.+.++|+++++..+ . +..+|. +++.+.++.. +......+.+.++|.++++... ++.|..||. . ++.
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-~~~v~~~d~--~-G~~ 157 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-TSEVREIAP--N-GQL 157 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-TTEEEEECT--T-SCE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-CCEEEEECC--C-CCE
Confidence 99999999988654 4 666664 6777766642 2224556778999999888555 999999997 3 544
Q ss_pred cCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 193 NKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
...+. ....+..... .+++..+++++.+++|..+|..+++.+.
T Consensus 158 ~w~~~--~~~~~~~~~~-----~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 158 LNSVK--LSGTPFSSAF-----LDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp EEEEE--CSSCCCEEEE-----CTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred EEEEE--CCCCccceeE-----cCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 33322 1222222222 5788899988888899999998877655
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=1.5e-12 Score=118.71 Aligned_cols=214 Identities=7% Similarity=-0.038 Sum_probs=152.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc--CCeeEEEecCCCCCCeEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL--TGEMKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~--~~~~~~~~~~~h~~~v~~ 78 (340)
|+|+.+++++..+. ....+.++.|+||++ ++++++.++.|.+||+. +++.+.++.. . .....
T Consensus 181 viD~~t~~v~~~i~-----~g~~p~~v~~SpDGr---------~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G-~~P~~ 244 (567)
T 1qks_A 181 LIDGSTYEIKTVLD-----TGYAVHISRLSASGR---------YLFVIGRDGKVNMIDLWMKEPTTVAEIKI-G-SEARS 244 (567)
T ss_dssp EEETTTCCEEEEEE-----CSSCEEEEEECTTSC---------EEEEEETTSEEEEEETTSSSCCEEEEEEC-C-SEEEE
T ss_pred EEECCCCeEEEEEe-----CCCCccceEECCCCC---------EEEEEcCCCeEEEEECCCCCCcEeEEEec-C-CCCce
Confidence 47888898888876 224567999999999 89999999999999995 7777777764 2 34689
Q ss_pred EEEe----cCCCEEEEEeC-CCcEEEEeCCCCeEEEEeecC-----------CCCeeEEEEccCCCEEEEe---cCcEEE
Q 036605 79 LAFA----KKGRSLHVVGT-NGMASEMKSEMGEVIREFKAS-----------EKPISSSAFLCEEKIFALA---SSEVRI 139 (340)
Q Consensus 79 v~~~----~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~-----------~~~i~~l~~~~~~~~l~~~---~~~i~i 139 (340)
++|+ |||+++++++. ++.|.++|..+.+.+..+... ...+..+..++++..++.. ++.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 69999888765 489999999999988775421 1257788889987776553 355999
Q ss_pred EECCCCcee--EEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCcee--eecCCCeeeeeecCCCC
Q 036605 140 LSLENGEEV--LKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPAL--SMRHSPVAIDCKNSPNG 215 (340)
Q Consensus 140 ~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 215 (340)
+|....+.+ ..+ ........+.|+|+++++++++..++.|.++|+ .+++....... ...|+.....+ + +
T Consensus 325 vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~--~t~kl~~~i~vgg~~Phpg~g~~~---~-~ 397 (567)
T 1qks_A 325 VDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDT--KEGKLVAIEDTGGQTPHPGRGANF---V-H 397 (567)
T ss_dssp EETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEET--TTTEEEEEEECSSSSBCCTTCEEE---E-E
T ss_pred EecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEEC--CCCcEEEEEeccCcCCCCccceee---E-C
Confidence 998876433 222 233456788999999999998877899999998 45443332221 11233222211 1 5
Q ss_pred CCCCEEE-EEe-CCCcEEEEECCC
Q 036605 216 EDGTVIL-AVA-ESGVAYSWDLKT 237 (340)
Q Consensus 216 ~~~~~l~-~~s-~dg~i~vwd~~~ 237 (340)
|++..++ +.. .++.|.++|..+
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCcEEEeCCCCCCeEEEecCCC
Confidence 6644444 443 468999999886
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=1.2e-13 Score=118.65 Aligned_cols=181 Identities=19% Similarity=0.161 Sum_probs=121.6
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCC---C--cEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC---
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSN---G--DILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN--- 94 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~d---g--~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d--- 94 (340)
.+.+++|||||+ +|+..+.+ + .|++|++.+++...... +.. +..++|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~---------~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~--~~~-~~~~~wspdg~~l~~~~~~~~~ 127 (347)
T 2gop_A 60 NATMPRISPDGK---------KIAFMRANEEKKVSEIWVADLETLSSKKILE--AKN-IRSLEWNEDSRKLLIVGFKRRE 127 (347)
T ss_dssp SCEEEEECTTSS---------EEEEEEEETTTTEEEEEEEETTTTEEEEEEE--ESE-EEEEEECTTSSEEEEEEECCCC
T ss_pred cCCCeEECCCCC---------EEEEEEeccCCCcceEEEEECCCCceEEEEc--CCC-ccceeECCCCCEEEEEEccCCC
Confidence 577899999998 78776643 3 48888998887554444 334 9999999999988887632
Q ss_pred ------------------------CcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--------C-c--EEE
Q 036605 95 ------------------------GMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS--------S-E--VRI 139 (340)
Q Consensus 95 ------------------------g~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--------~-~--i~i 139 (340)
..|.+||+.+++.+..+.. . .+..++|+|+| +++++. . . |++
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~ 204 (347)
T 2gop_A 128 DEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYI 204 (347)
T ss_dssp ---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEE
T ss_pred cCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEE
Confidence 5789999999887455554 3 78899999999 766642 1 3 566
Q ss_pred EECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCC-------CeEEEEEccCCCCCccCCceeeecCCCeeee-eec
Q 036605 140 LSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGE-------KHLQVWRCDISSKTVNKGPALSMRHSPVAID-CKN 211 (340)
Q Consensus 140 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (340)
+| +++ ...+..+ ..+..+ +|+|++|+..+..+ ..|.+|| +++...... .+...+.. +
T Consensus 205 ~d--~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d----~~~~~~l~~---~~~~~~~~~~-- 269 (347)
T 2gop_A 205 WE--DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD----GKEVMGILD---EVDRGVGQAK-- 269 (347)
T ss_dssp EE--TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC----SSCEEESST---TCCSEEEEEE--
T ss_pred eC--CCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC----CCceEeccc---cCCcccCCcc--
Confidence 66 543 4444444 455444 99999988877522 3566665 222111111 22333332 3
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 212 SPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 212 ~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.| + ++ ++++++.++.++|| +.+
T Consensus 270 ~~-s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 270 IK-D-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp EE-T-TE-EEEEEEETTEEEEE-EES
T ss_pred EE-c-Cc-EEEEEecCCcEEEE-EcC
Confidence 55 6 77 88899999999999 874
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=5.9e-13 Score=110.63 Aligned_cols=171 Identities=13% Similarity=0.113 Sum_probs=132.3
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+||.++|+.+.++... ....+.+++++|+|+ +|+ +.++.|..||. +|+.++.+.......+.++.
T Consensus 19 ~~d~~tG~~~w~~~~~---~~~~~~~~~~~pdG~---------ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 19 IINKDTKEIVWEYPLE---KGWECNSVAATKAGE---------ILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp EEETTTTEEEEEEECC---TTCCCCEEEECTTSC---------EEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred EEECCCCeEEEEeCCC---ccCCCcCeEECCCCC---------EEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 5888999999888722 125688999999999 777 45778999998 89999999863345788999
Q ss_pred EecCCCEEEEEeC-CCcEEEEeCCCCeEEEEeecCC------CCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEe
Q 036605 81 FAKKGRSLHVVGT-NGMASEMKSEMGEVIREFKASE------KPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKF 151 (340)
Q Consensus 81 ~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~------~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~ 151 (340)
+.++|+.+++.+. ++.|..+|. +|+.+..+.... .....+++.++|.++++.. +.|.+||.. |+.+.++
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~ 161 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSV 161 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEE
Confidence 9999999999887 788888886 688777765321 2345677899999998854 449999998 9888888
Q ss_pred ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc
Q 036605 152 SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV 192 (340)
Q Consensus 152 ~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~ 192 (340)
... ..+..+.+.+++..++++.. ++.|..+|. .+++.
T Consensus 162 ~~~-~~~~~~~~~~~g~~~v~~~~-~~~v~~~d~--~tG~~ 198 (276)
T 3no2_A 162 KLS-GTPFSSAFLDNGDCLVACGD-AHCFVQLNL--ESNRI 198 (276)
T ss_dssp ECS-SCCCEEEECTTSCEEEECBT-TSEEEEECT--TTCCE
T ss_pred ECC-CCccceeEcCCCCEEEEeCC-CCeEEEEeC--cCCcE
Confidence 654 34567788899988888655 778888886 44544
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=3.1e-13 Score=115.54 Aligned_cols=206 Identities=12% Similarity=0.042 Sum_probs=139.0
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCC------------------------CcEEEEEccCCeeEEEecCCCCCCe
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSN------------------------GDILAVDVLTGEMKWKSTGRHPGGL 76 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d------------------------g~i~i~d~~~~~~~~~~~~~h~~~v 76 (340)
-..+.+++++|+|+ ++++...+ +.|.+||..+++....+...+-...
T Consensus 23 l~~v~~va~d~~G~---------l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p 93 (329)
T 3fvz_A 23 PGQVSGVALDSKNN---------LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLP 93 (329)
T ss_dssp CSCEEEEEECTTCC---------EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSE
T ss_pred cCCceEEEECCCCC---------EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCc
Confidence 36799999999999 88887777 4799999998988776654355688
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCe-EEEEee---------cCCCCeeEEEEcc-CCCEEEEec---CcEEEEEC
Q 036605 77 AGLAFAKKGRSLHVVGTNGMASEMKSEMGE-VIREFK---------ASEKPISSSAFLC-EEKIFALAS---SEVRILSL 142 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~---------~~~~~i~~l~~~~-~~~~l~~~~---~~i~i~d~ 142 (340)
..++++++|+.+++...++.|++||..... .+..+. .+......++++| ++.++++.. +.|++||
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 999999999987777778999999986442 344442 2334678999999 788777753 3399999
Q ss_pred CCCceeEEeec----------CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecC
Q 036605 143 ENGEEVLKFSD----------DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNS 212 (340)
Q Consensus 143 ~~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (340)
.+++.+..+.. +......++++|++..|+.+...++.|++|+. .+++....+... .+......+ .
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~--~~G~~~~~~~~~-~~~~~~~~~--~ 247 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT--DTKEFVREIKHA-SFGRNVFAI--S 247 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET--TTCCEEEEECCT-TTTTCEEEE--E
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC--CCCcEEEEEecc-ccCCCccee--e
Confidence 56666666632 12347899999994456665666899999998 334332222100 111222222 2
Q ss_pred CCCC------CCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 213 PNGE------DGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 213 ~~~~------~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+ +| ++..+++...+..|++|+..+++.+.
T Consensus 248 ~-~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 248 Y-IPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp E-ETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred e-cCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 2 34 22222233345589999988776554
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=2e-14 Score=125.70 Aligned_cols=212 Identities=8% Similarity=-0.031 Sum_probs=136.2
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEE---
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAG--- 78 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~--- 78 (340)
||+.+|+...... ++.....++.|+|+++ +|+.++.++.|++||+.+++....+.. +.+....
T Consensus 65 ~d~~~~~~~~l~~----~~~~~~~~~~~spdg~---------~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~ 130 (396)
T 3c5m_A 65 LNLETQQAVQLTE----GKGDNTFGGFISTDER---------AFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTW 130 (396)
T ss_dssp EETTTTEEEECCC----SSCBCTTTCEECTTSS---------EEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEE
T ss_pred EECCCCcEEEeec----CCCCccccceECCCCC---------EEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCE
Confidence 5666665443221 2222333478999999 899998899999999998876554443 3332222
Q ss_pred ----------------EEEecCCCEEEEE-----eCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEcc-CCCEEEEe-c-
Q 036605 79 ----------------LAFAKKGRSLHVV-----GTNGMASEMKSEMGEVIREFKASEKPISSSAFLC-EEKIFALA-S- 134 (340)
Q Consensus 79 ----------------v~~~~~~~~l~s~-----~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~-~- 134 (340)
+.|+|+++.++.+ ..+..|.+||+.+++..... .+...+..+.|+| ++..++.. .
T Consensus 131 l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~ 209 (396)
T 3c5m_A 131 VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEG 209 (396)
T ss_dssp EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECS
T ss_pred EEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecC
Confidence 3456777665543 35568999999988765444 4566788999999 78766542 1
Q ss_pred ------CcEEEEECCCCceeEEeecC--CCCeEEEEECCCCCEEEEEEcCC----CeEEEEEccCCCCCccCCceeeecC
Q 036605 135 ------SEVRILSLENGEEVLKFSDD--VGPLQYVSASDGAKIIITAGYGE----KHLQVWRCDISSKTVNKGPALSMRH 202 (340)
Q Consensus 135 ------~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~ 202 (340)
..|++||+..++. ..+..+ ...+..+.|+|+|++|+..+..+ +.|.+||+ .+++.... . ..
T Consensus 210 ~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~--~~g~~~~l-~---~~ 282 (396)
T 3c5m_A 210 PHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP--ETLENEEV-M---VM 282 (396)
T ss_dssp CSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT--TTCCEEEE-E---EC
T ss_pred CCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEEC--CCCCeEEe-e---eC
Confidence 2489999876643 333323 23577899999999887765522 44999998 34432111 1 11
Q ss_pred CCeeeeeecCCCCC-CCCEEEEEe----------------CCCcEEEEECCCCCc
Q 036605 203 SPVAIDCKNSPNGE-DGTVILAVA----------------ESGVAYSWDLKTVSQ 240 (340)
Q Consensus 203 ~~~~~~~~~~~~~~-~~~~l~~~s----------------~dg~i~vwd~~~~~~ 240 (340)
+... ..| ++ ++.++++++ .++.|++||+.+++.
T Consensus 283 ~~~~----~~~-s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 283 PPCS----HLM-SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CSEE----EEE-ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCCC----CCc-cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 1111 244 67 888888755 347899999887643
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=3e-12 Score=107.61 Aligned_cols=196 Identities=7% Similarity=-0.066 Sum_probs=134.1
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
+.....+++|+|+++ .+++++..++.|..||..++ ...+.. +...+.+++++++|+++++...++.|.+
T Consensus 26 ~~~~~eg~~~d~~g~--------~l~~~~~~~~~i~~~~~~~~--~~~~~~-~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 26 GFTWTEGPVYVPARS--------AVIFSDVRQNRTWAWSDDGQ--LSPEMH-PSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CCSSEEEEEEEGGGT--------EEEEEEGGGTEEEEEETTSC--EEEEES-SCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCccccCCeEeCCCC--------EEEEEeCCCCEEEEEECCCC--eEEEEC-CCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 445678999999984 16788889999999999887 455555 6678999999999998777666789999
Q ss_pred EeCCCCeEEEEeecC----CCCeeEEEEccCCCEEEEec-------------------CcEEEEECCCCceeEEeecCCC
Q 036605 100 MKSEMGEVIREFKAS----EKPISSSAFLCEEKIFALAS-------------------SEVRILSLENGEEVLKFSDDVG 156 (340)
Q Consensus 100 wd~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~~~-------------------~~i~i~d~~~~~~~~~~~~~~~ 156 (340)
||..+++........ ...+..++++|+|+++++.. +.|..++.. + .+..+..+..
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~~~~~~ 172 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSAPIRDRV 172 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEEEECCCS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEEeecCCC
Confidence 999888754433221 23467899999999888621 236666654 4 3445556667
Q ss_pred CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc-cCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 157 PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV-NKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 157 ~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
....++|+|+++.+ .+...++.|.+|+++ ..+.. .....+ .........+ .+ .++|.++++. ++.|.+|+.
T Consensus 173 ~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~-~~g~~~~~~~~~-~~~~~~p~~i--~~-d~~G~l~v~~--~~~v~~~~~ 244 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDTGDNATHRYCLN-ARGETEYQGVHF-TVEPGKTDGL--RV-DAGGLIWASA--GDGVHVLTP 244 (296)
T ss_dssp SEEEEEECTTSCEE-EEETTTTEEEEEEEC-SSSCEEEEEEEE-CCSSSCCCSE--EE-BTTSCEEEEE--TTEEEEECT
T ss_pred CCccEEECCCCCEE-EEeCCCCeEEEEEEC-CCCcCcCCCeEe-eCCCCCCCeE--EE-CCCCCEEEEc--CCeEEEECC
Confidence 78999999999988 445558999999984 12222 001111 0111111111 22 6788766555 778999997
Q ss_pred C
Q 036605 236 K 236 (340)
Q Consensus 236 ~ 236 (340)
.
T Consensus 245 ~ 245 (296)
T 3e5z_A 245 D 245 (296)
T ss_dssp T
T ss_pred C
Confidence 5
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=2.6e-13 Score=128.09 Aligned_cols=203 Identities=11% Similarity=0.003 Sum_probs=135.8
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCC-----cEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNG-----DILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN 94 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d 94 (340)
+...+..++|||||+ +||.+..++ .|++||+.+++....... + ..+..++|+|||+.|+.++.+
T Consensus 123 ~~~~~~~~~~SPDg~---------~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~-~~~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 123 GTVALRGYAFSEDGE---------YFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-R-VKFSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp SCEEEEEEEECTTSS---------EEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-E-ECSCCEEECTTSSEEEEEECC
T ss_pred CCEEEEEEEECCCCC---------EEEEEEcCCCCceEEEEEEECCCCCCCccccc-C-cccceEEEEeCCCEEEEEEEC
Confidence 334688999999998 788765543 899999999986653322 2 236789999999999998877
Q ss_pred Cc----------------EEEEeCCCCeE--EEEeec--CCCCeeEEEEccCCCEEEEe-------cCcEEEEECCC---
Q 036605 95 GM----------------ASEMKSEMGEV--IREFKA--SEKPISSSAFLCEEKIFALA-------SSEVRILSLEN--- 144 (340)
Q Consensus 95 g~----------------i~~wd~~~~~~--~~~~~~--~~~~i~~l~~~~~~~~l~~~-------~~~i~i~d~~~--- 144 (340)
+. |++|++.++.. ...+.. +...+..+.|+|||++|+.. ...|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 65 99999988752 122222 34457889999999998763 23499999986
Q ss_pred ---Cc-eeEEeecCCCCeEEEEECCCCCEEEEEEcCC---CeEEEEEccCCCCCccCCceeeecCCC--eeeeeecCCCC
Q 036605 145 ---GE-EVLKFSDDVGPLQYVSASDGAKIIITAGYGE---KHLQVWRCDISSKTVNKGPALSMRHSP--VAIDCKNSPNG 215 (340)
Q Consensus 145 ---~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 215 (340)
+. ....+..+...+.. .|+++|..|+..+..+ ..|.+||+ .++... .......+.. .+..+ .+ .
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~--~~~~~~-~~~~l~~~~~~~~~~~~--~~-~ 344 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDF--TDPEES-KWKVLVPEHEKDVLEWV--AC-V 344 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEET--TSCCGG-GCEEEECCCSSCEEEEE--EE-E
T ss_pred ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeC--CCCCcc-cceeccCCCCCCeEEEE--EE-E
Confidence 43 35666666666554 5888988887766533 36888887 333210 0111113322 33333 34 4
Q ss_pred CCCCEEEEEeCCCc--EEEEECCCCCc
Q 036605 216 EDGTVILAVAESGV--AYSWDLKTVSQ 240 (340)
Q Consensus 216 ~~~~~l~~~s~dg~--i~vwd~~~~~~ 240 (340)
+++.++++...+|. |++|++.+++.
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLATGAL 371 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cCCEEEEEEEECCEEEEEEEECCCCCE
Confidence 56778888888884 56677755543
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.55 E-value=1.3e-12 Score=123.29 Aligned_cols=217 Identities=12% Similarity=0.091 Sum_probs=140.4
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCc----------------EEEEEccCCee
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGD----------------ILAVDVLTGEM 64 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~----------------i~i~d~~~~~~ 64 (340)
|||+.+|+...... ....+..++|+||++ .|+.++.++. |++|++.+++.
T Consensus 155 v~d~~tg~~~~~~~-----~~~~~~~~~wspDg~---------~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~ 220 (710)
T 2xdw_A 155 FMKVDGAKELPDVL-----ERVKFSCMAWTHDGK---------GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS 220 (710)
T ss_dssp EEETTTTEEEEEEE-----EEECSCCEEECTTSS---------EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG
T ss_pred EEECCCCCCCcccc-----cCcccceEEEEeCCC---------EEEEEEECCccccccccccccCCCCEEEEEECCCCcc
Confidence 57888888765322 112367899999998 7888887766 99999988762
Q ss_pred --EEEecC-CCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEeCCC------Ce-EEEEeecCCCCeeEEEEccCCCE
Q 036605 65 --KWKSTG-RHPGGLAGLAFAKKGRSLHVVGT-----NGMASEMKSEM------GE-VIREFKASEKPISSSAFLCEEKI 129 (340)
Q Consensus 65 --~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~-----dg~i~~wd~~~------~~-~~~~~~~~~~~i~~l~~~~~~~~ 129 (340)
...+.. .|...+..+.|+|||++|+.++. +..|.+||+.+ +. ....+..+...+.. .|+|+|..
T Consensus 221 ~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~ 299 (710)
T 2xdw_A 221 EDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTV 299 (710)
T ss_dssp GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTE
T ss_pred cceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCE
Confidence 222222 15666889999999999888764 56899999976 43 34555555555544 48899887
Q ss_pred EEEecC------cEEEEECCCCc--eeEEeecCCC--CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceee
Q 036605 130 FALASS------EVRILSLENGE--EVLKFSDDVG--PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALS 199 (340)
Q Consensus 130 l~~~~~------~i~i~d~~~~~--~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~ 199 (340)
|+..+. .|.+||+.++. ....+..|.. .+..+.|++++..+++... ++..+||-++...++....+.
T Consensus 300 l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~-~g~~~l~~~~~~~g~~~~~l~-- 376 (710)
T 2xdw_A 300 FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH-DVKNTLQLHDLATGALLKIFP-- 376 (710)
T ss_dssp EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE-TTEEEEEEEETTTCCEEEEEC--
T ss_pred EEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE-CCEEEEEEEECCCCCEEEecC--
Confidence 765322 29999998764 2345555543 5778899877766666555 876555554323443222222
Q ss_pred ecCCCeeeeeecCCCCCCCCEEEEE-e---CCCcEEEEECCCCC
Q 036605 200 MRHSPVAIDCKNSPNGEDGTVILAV-A---ESGVAYSWDLKTVS 239 (340)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~l~~~-s---~dg~i~vwd~~~~~ 239 (340)
.+...+..+ .+ ++++..++.. + ..+.|++||+.+++
T Consensus 377 -~~~~~v~~~--~~-s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 377 -LEVGSVVGY--SG-QKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -CCSSEEEEE--EC-CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -CCCceEEEE--ec-CCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 123333333 44 5677665533 2 34789999998765
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.5e-12 Score=107.72 Aligned_cols=200 Identities=11% Similarity=0.016 Sum_probs=135.4
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMK 101 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd 101 (340)
..+.+++++++++ ++++.. ++.|.+||...... ..+.......+.+++++++|+.+++...++.|.+|+
T Consensus 67 ~~p~~i~~~~~g~---------l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 135 (270)
T 1rwi_B 67 YQPQGLAVDGAGT---------VYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLA 135 (270)
T ss_dssp CSCCCEEECTTCC---------EEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred CCcceeEECCCCC---------EEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEE
Confidence 4677899999988 666666 88999999876543 333321335789999999998777666778999998
Q ss_pred CCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCe
Q 036605 102 SEMGEVIREFKASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKH 179 (340)
Q Consensus 102 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~ 179 (340)
..+.............+..++++++++++++.. +.|.+||............+...+..++++++|..+++ ...++.
T Consensus 136 ~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~-~~~~~~ 214 (270)
T 1rwi_B 136 AGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVT-EHNTNQ 214 (270)
T ss_dssp TTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEE-ETTTSC
T ss_pred CCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEE-ECCCCc
Confidence 665543322222334678999999998776643 45999998876544333333367889999999955555 544889
Q ss_pred EEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCcc
Q 036605 180 LQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 180 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
|.+|+.. ...... . ...+......+ .+ .++|..+++...++.|++|++...+..
T Consensus 215 v~~~~~~--~~~~~~-~--~~~~~~~p~~i--~~-~~~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 215 VVKLLAG--STTSTV-L--PFTGLNTPLAV--AV-DSDRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp EEEECTT--CSCCEE-C--CCCSCSCEEEE--EE-CTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred EEEEcCC--CCccee-e--ccCCCCCceeE--EE-CCCCCEEEEECCCCEEEEEcCCCcccc
Confidence 9999973 222111 1 11111222223 33 688888888889999999998765543
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=4.8e-12 Score=108.04 Aligned_cols=215 Identities=8% Similarity=-0.037 Sum_probs=146.5
Q ss_pred CccCCCCceeeeeeC--CCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEE
Q 036605 1 IWSTNDGSLLAEWKQ--PDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAG 78 (340)
Q Consensus 1 vwd~~~g~~~~~~~~--~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~ 78 (340)
+||+.++++...+.. ...........+.+. +++ ++++...++.|.+||..+++.+.++. .......
T Consensus 21 ~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~---------lyv~~~~~~~v~viD~~t~~~~~~i~--~~~~p~~ 88 (328)
T 3dsm_A 21 YYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGI---------GWIVVNNSHVIFAIDINTFKEVGRIT--GFTSPRY 88 (328)
T ss_dssp EEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTE---------EEEEEGGGTEEEEEETTTCCEEEEEE--CCSSEEE
T ss_pred EEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCE---------EEEEEcCCCEEEEEECcccEEEEEcC--CCCCCcE
Confidence 367777776654310 001223456677774 345 67777778999999999999888885 3467899
Q ss_pred EEEecCCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCC-----CCeeEEEEccCCCEEEEe---cCcEEEEECCCCceeE
Q 036605 79 LAFAKKGRSLHVVG-TNGMASEMKSEMGEVIREFKASE-----KPISSSAFLCEEKIFALA---SSEVRILSLENGEEVL 149 (340)
Q Consensus 79 v~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~l~~~---~~~i~i~d~~~~~~~~ 149 (340)
+++++++ .|+.+. .++.|.+||+.+++....+.... .....+++ .+++.+++. ++.|.++|+.+++.+.
T Consensus 89 i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 89 IHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred EEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 9999888 566655 78999999999999877766433 14567777 444444442 3459999999998877
Q ss_pred EeecCCCCeEEEEECCCCCEEEEEEcCC----------CeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCC
Q 036605 150 KFSDDVGPLQYVSASDGAKIIITAGYGE----------KHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGT 219 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s~~~~~l~s~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (340)
.+... .....+.++|+|++++++.. + +.|.++|. .+++....+.+..+..+..+.+ ++++.
T Consensus 167 ~i~~g-~~p~~i~~~~dG~l~v~~~~-~~~~~~~~~~~~~v~~id~--~t~~v~~~~~~~~g~~p~~la~-----~~d~~ 237 (328)
T 3dsm_A 167 ELTIG-IQPTSLVMDKYNKMWTITDG-GYEGSPYGYEAPSLYRIDA--ETFTVEKQFKFKLGDWPSEVQL-----NGTRD 237 (328)
T ss_dssp EEECS-SCBCCCEECTTSEEEEEBCC-BCTTCSSCBCCCEEEEEET--TTTEEEEEEECCTTCCCEEEEE-----CTTSC
T ss_pred EEEcC-CCccceEEcCCCCEEEEECC-CccCCccccCCceEEEEEC--CCCeEEEEEecCCCCCceeEEE-----ecCCC
Confidence 77543 34578899999986666433 4 78999997 4444332222211223444444 78888
Q ss_pred EEEEEeCCCcEEEEECCCCCc
Q 036605 220 VILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 220 ~l~~~s~dg~i~vwd~~~~~~ 240 (340)
+|+++.. .|++||..+++.
T Consensus 238 ~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 238 TLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp EEEEESS--SEEEEETTCSSC
T ss_pred EEEEEcc--EEEEEECCCCce
Confidence 8888765 899999987664
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.54 E-value=6.1e-12 Score=114.66 Aligned_cols=188 Identities=15% Similarity=0.022 Sum_probs=140.9
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCC--CCeEEEEeecCCCCeeEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSE--MGEVIREFKASEKPISSS 121 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~--~~~~~~~~~~~~~~i~~l 121 (340)
++++...++.|.++|..+++.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....+
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~i 245 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSI 245 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCcee
Confidence 778888899999999999998888874 3367799999999999999999999999996 888887776543 46789
Q ss_pred EEc----cCCCEEEEec---CcEEEEECCCCceeEEeecC----------C-CCeEEEEECCCCCEEEEEEcCCCeEEEE
Q 036605 122 AFL----CEEKIFALAS---SEVRILSLENGEEVLKFSDD----------V-GPLQYVSASDGAKIIITAGYGEKHLQVW 183 (340)
Q Consensus 122 ~~~----~~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~----------~-~~v~~~~~s~~~~~l~s~~~~d~~i~iw 183 (340)
+|+ |||+++++++ +.+.++|..+.+.+..+... . ..+..+.+++++..++.....+|.|.++
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~v 325 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV 325 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEE
Confidence 999 6999998744 55999999999888766421 1 2577888899887777766768999999
Q ss_pred EccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEe-CCCcEEEEECCCCCcc
Q 036605 184 RCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVA-ESGVAYSWDLKTVSQD 241 (340)
Q Consensus 184 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s-~dg~i~vwd~~~~~~~ 241 (340)
|.. ......... +.......+. .| ++++.++++++ .++.|.++|+.+++..
T Consensus 326 d~~--~~~~~~v~~--i~~~~~~~d~--~~-~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 326 DYT--DLNNLKTTE--ISAERFLHDG--GL-DGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp ETT--CSSEEEEEE--EECCSSEEEE--EE-CTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ecC--CCccceeee--eeccccccCc--eE-CCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 973 322111111 1222222233 34 78999887665 5788999999986544
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=3.3e-12 Score=107.28 Aligned_cols=208 Identities=13% Similarity=0.123 Sum_probs=137.2
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC---CCCCCeEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG---RHPGGLAG 78 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~---~h~~~v~~ 78 (340)
||..++ ...+. .+...+.+++|+|+++ ++++...++.|.+||..+++....... .....++.
T Consensus 55 ~~~~~~--~~~~~----~~~~~~~~l~~~~dg~---------l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 119 (296)
T 3e5z_A 55 WSDDGQ--LSPEM----HPSHHQNGHCLNKQGH---------LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPND 119 (296)
T ss_dssp EETTSC--EEEEE----SSCSSEEEEEECTTCC---------EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCC
T ss_pred EECCCC--eEEEE----CCCCCcceeeECCCCc---------EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCC
Confidence 555555 44454 3456789999999999 777777778999999988875433221 11235678
Q ss_pred EEEecCCCEEEEE----e-------------CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--CcEEE
Q 036605 79 LAFAKKGRSLHVV----G-------------TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS--SEVRI 139 (340)
Q Consensus 79 v~~~~~~~~l~s~----~-------------~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i 139 (340)
++++|+|+.+++. . ..+.|..++.. ++. ..+..+......++|+|+++.+++.. +.|++
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHR 197 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEE
Confidence 9999999988763 2 13467777765 543 33444556678999999999885543 34999
Q ss_pred EECC-CCce---eEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCC
Q 036605 140 LSLE-NGEE---VLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNG 215 (340)
Q Consensus 140 ~d~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (340)
|++. +++. ...+..+...+..++++++|...++. ++.|.+|+. .++....+. .+.. ...+ .+..
T Consensus 198 ~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~---~~~v~~~~~---~g~~~~~~~---~~~~-~~~~--~f~~ 265 (296)
T 3e5z_A 198 YCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA---GDGVHVLTP---DGDELGRVL---TPQT-TSNL--CFGG 265 (296)
T ss_dssp EEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE---TTEEEEECT---TSCEEEEEE---CSSC-CCEE--EEES
T ss_pred EEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc---CCeEEEECC---CCCEEEEEE---CCCC-ceeE--EEEC
Confidence 9986 4543 23333345567789999999866654 688999996 243332222 1111 2233 3325
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCC
Q 036605 216 EDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 216 ~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
+++..|++++.++ +.-++..+..
T Consensus 266 ~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 266 PEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp TTSCEEEEEETTE-EEEEECSCCB
T ss_pred CCCCEEEEEcCCe-EEEEEccccc
Confidence 7888888888765 6666766544
No 188
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=7.9e-12 Score=104.38 Aligned_cols=197 Identities=14% Similarity=0.142 Sum_probs=135.4
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC-----CCCCCeEEEEEe-cCCCEEEEEeC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG-----RHPGGLAGLAFA-KKGRSLHVVGT 93 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-----~h~~~v~~v~~~-~~~~~l~s~~~ 93 (340)
+-....+++++|+++ ++++...++.|.+||.. ++....+.. .+...+.+++++ +++..+++...
T Consensus 28 ~~~~p~~v~~~~~g~---------l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~ 97 (286)
T 1q7f_A 28 QFTEPSGVAVNAQND---------IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS 97 (286)
T ss_dssp CBSCEEEEEECTTCC---------EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG
T ss_pred ccCCCceEEECCCCC---------EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC
Confidence 446789999999999 88888899999999987 555655532 244578999995 56655555433
Q ss_pred -CCcEEEEeCCCCeEEEEeec-CCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEee--cCCCCeEEEEECCCC
Q 036605 94 -NGMASEMKSEMGEVIREFKA-SEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKFS--DDVGPLQYVSASDGA 167 (340)
Q Consensus 94 -dg~i~~wd~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~s~~~ 167 (340)
++.|.+|| .+++.+..+.. +...+..++++|+++++++.. +.|.+||.. ++.+..+. .+...+..++++++|
T Consensus 98 ~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 98 PTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp GGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSS
T ss_pred CCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCC
Confidence 78999999 56776666643 335688999999999777743 449999964 55555554 344568999999999
Q ss_pred CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCC-cEEEEECC
Q 036605 168 KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESG-VAYSWDLK 236 (340)
Q Consensus 168 ~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg-~i~vwd~~ 236 (340)
..+++ ...++.|.+|+.. +.....+.. .++......+ ++ +++|.++++...++ .|.+|+..
T Consensus 176 ~l~v~-~~~~~~i~~~~~~---g~~~~~~~~-~g~~~~p~~i--~~-d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 176 EIFIS-DNRAHCVKVFNYE---GQYLRQIGG-EGITNYPIGV--GI-NSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEEE-EGGGTEEEEEETT---CCEEEEESC-TTTSCSEEEE--EE-CTTCCEEEEECSSSCEEEEECTT
T ss_pred CEEEE-ECCCCEEEEEcCC---CCEEEEEcc-CCccCCCcEE--EE-CCCCCEEEEeCCCCEEEEEECCC
Confidence 76555 4448999999962 222111110 0111122222 33 68888888887775 99999953
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=4.4e-12 Score=108.94 Aligned_cols=195 Identities=9% Similarity=-0.035 Sum_probs=123.8
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcC---------------------------CCcE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTS---------------------------NGDI 54 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~---------------------------dg~i 54 (340)
||+.+|+...... .. . +.+++|+|+++ .|+.++. ...|
T Consensus 90 ~~~~~g~~~~l~~----~~-~-~~~~~wspdg~---------~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 90 ADLETLSSKKILE----AK-N-IRSLEWNEDSR---------KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp EETTTTEEEEEEE----ES-E-EEEEEECTTSS---------EEEEEEECCCC---------CCCC---------CEEEE
T ss_pred EECCCCceEEEEc----CC-C-ccceeECCCCC---------EEEEEEccCCCcCCcEEEcccceeecCcccccCccceE
Confidence 5666666554443 22 3 89999999998 7777653 2579
Q ss_pred EEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCC-------cEEEEeCCCCeEEEEeecCCCCeeEEEEccCC
Q 036605 55 LAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG-------MASEMKSEMGEVIREFKASEKPISSSAFLCEE 127 (340)
Q Consensus 55 ~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg-------~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~ 127 (340)
++||+.+++....+.. . .+..++|+|+| .++++..++ ...+|.+.+++.. .+..+ ..+..+ +|+|
T Consensus 155 ~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg 226 (347)
T 2gop_A 155 WIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDG 226 (347)
T ss_dssp EEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECS
T ss_pred EEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCC
Confidence 9999998876455554 2 78899999999 877776542 3344433355543 33333 444444 9999
Q ss_pred CEEEEec----------CcEEEEECCCCceeEEeecCCCCeEE-EEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCc
Q 036605 128 KIFALAS----------SEVRILSLENGEEVLKFSDDVGPLQY-VSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGP 196 (340)
Q Consensus 128 ~~l~~~~----------~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~ 196 (340)
+.++..+ ..|++|| +++.......+...+.. +.|+ ++ .++++.. ++.++|| ++ .++. ..
T Consensus 227 ~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~-~~~~~l~-~~--~g~~-~~- 296 (347)
T 2gop_A 227 ERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE-EGSVNLY-IW--DGEI-KP- 296 (347)
T ss_dssp SCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE-TTEEEEE-EE--SSSE-EE-
T ss_pred CEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec-CCcEEEE-Ec--CCce-EE-
Confidence 9876532 2388888 55444334555677876 8999 88 7777666 8999999 95 3322 11
Q ss_pred eeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcE-EEEECC
Q 036605 197 ALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVA-YSWDLK 236 (340)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i-~vwd~~ 236 (340)
...+...+..+ .+ ++ ..+++++.++.. .+|.+.
T Consensus 297 --~~~~~~~v~~~--~~-s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 297 --IAKGRHWIMGF--DV-DE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp --EECSSSEEEEE--EE-SS--SEEEEEECSSSCCEEEEES
T ss_pred --EecCCCeEEee--ee-eC--cEEEEEcCCCChHHheEeC
Confidence 11334444444 44 55 567777777654 666654
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.45 E-value=8.4e-11 Score=101.92 Aligned_cols=216 Identities=13% Similarity=0.033 Sum_probs=134.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc----------CCCcEEEEEccCCeeEEEecC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT----------SNGDILAVDVLTGEMKWKSTG 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~----------~dg~i~i~d~~~~~~~~~~~~ 70 (340)
+||+.+++++..+.. ...+ .+++|||++ +|+++. .++.|.+||..+.+.+..+.-
T Consensus 51 v~D~~t~~~~~~i~~----g~~p--~i~~spDg~---------~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~ 115 (373)
T 2mad_H 51 VLDAGSGSILGHVNG----GFLP--NPVAAHSGS---------EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIEL 115 (373)
T ss_pred EEECCCCeEEEEecC----CCCC--CeEECCCCC---------EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEEC
Confidence 478888888877662 1223 899999998 777765 367899999998887766542
Q ss_pred C---C---CCCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCeEEEE-eecCCCCee--------EEEEccCCCEEE--
Q 036605 71 R---H---PGGLAGLAFAKKGRSLHVVGT--NGMASEMKSEMGEVIRE-FKASEKPIS--------SSAFLCEEKIFA-- 131 (340)
Q Consensus 71 ~---h---~~~v~~v~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~-~~~~~~~i~--------~l~~~~~~~~l~-- 131 (340)
. + ......++|+|||++|+++.. ++.|.++| .+++.+.. +..... +. -+.++++|..++
T Consensus 116 ~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 116 PDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC-YHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred CCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce-EEEEeCCCceEEEEcCCCCEEEEE
Confidence 1 0 123458999999999999874 47899999 99988777 543211 00 011222222111
Q ss_pred -------------------------------------EecCcEEEEECCCCc--eeEEeec----------CCCCeEEEE
Q 036605 132 -------------------------------------LASSEVRILSLENGE--EVLKFSD----------DVGPLQYVS 162 (340)
Q Consensus 132 -------------------------------------~~~~~i~i~d~~~~~--~~~~~~~----------~~~~v~~~~ 162 (340)
+.++.+.+.|+..+. .+..+.. .......+.
T Consensus 194 ~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 194 HAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred CCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 111224444543321 1111110 012233477
Q ss_pred ECCCCCEEEEEEcC---------CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCC-EEEEEe-CCCcEE
Q 036605 163 ASDGAKIIITAGYG---------EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGT-VILAVA-ESGVAY 231 (340)
Q Consensus 163 ~s~~~~~l~s~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~s-~dg~i~ 231 (340)
+++++..++.+... .+.|.++|. .+.+....+ ..+..+..+.+ ++||. +++++. .++.|.
T Consensus 274 ~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~--~t~~vv~~i--~~g~~p~~i~~-----s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG--LVGQTSSQI--SLGHDVDAISV-----AQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred ECCCCCEEEEEeccCCcccccCCCCeEEEEEC--CCCEEEEEE--ECCCCcCeEEE-----CCCCCeEEEEEcCCCCeEE
Confidence 89998888875531 357888887 455443333 33555555555 89998 777777 489999
Q ss_pred EEECCCCCccC
Q 036605 232 SWDLKTVSQDE 242 (340)
Q Consensus 232 vwd~~~~~~~~ 242 (340)
+||..+++.+.
T Consensus 345 ViD~~t~~vv~ 355 (373)
T 2mad_H 345 IYDAGAGDQDQ 355 (373)
T ss_pred EEECCCCCEEe
Confidence 99999887665
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.45 E-value=8e-11 Score=100.45 Aligned_cols=168 Identities=11% Similarity=0.105 Sum_probs=115.6
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCC----CcEEEEEccCCeeEEEecC-CCCCCe
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSN----GDILAVDVLTGEMKWKSTG-RHPGGL 76 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d----g~i~i~d~~~~~~~~~~~~-~h~~~v 76 (340)
||..+++...... .+...+.+++|+|+++ ++++...+ +.|.+||..++.....+.. .+...+
T Consensus 71 ~d~~~~~~~~~~~----~~~~~~~~i~~~~dg~---------l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 137 (333)
T 2dg1_A 71 INPETKEIKRPFV----SHKANPAAIKIHKDGR---------LFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCI 137 (333)
T ss_dssp ECTTTCCEEEEEE----CSSSSEEEEEECTTSC---------EEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCE
T ss_pred EeCCCCcEEEEee----CCCCCcceEEECCCCc---------EEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcc
Confidence 6666666554433 2456799999999999 77777666 6899999988765433331 144579
Q ss_pred EEEEEecCCCEEEEEeC------CCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEe---cCcEEEEECCC-Cc
Q 036605 77 AGLAFAKKGRSLHVVGT------NGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALA---SSEVRILSLEN-GE 146 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~---~~~i~i~d~~~-~~ 146 (340)
.+++++|+|+.+++... .+.|..+|..+++..... .....+..++|+|+++.++.+ ++.|++||+.+ +.
T Consensus 138 ~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~ 216 (333)
T 2dg1_A 138 DDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGV 216 (333)
T ss_dssp EEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSS
T ss_pred cceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCc
Confidence 99999999987776543 356777887665543322 233457889999999866543 34599999864 33
Q ss_pred eeEE--------eecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEc
Q 036605 147 EVLK--------FSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 147 ~~~~--------~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
.+.. +.++ ..+..++++++|..+++... ++.|.+||.
T Consensus 217 ~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~-~~~v~~~d~ 261 (333)
T 2dg1_A 217 TIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYG-QGRVLVFNK 261 (333)
T ss_dssp SEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEET-TTEEEEECT
T ss_pred CcccccceEEEecCCC-CCCCceEECCCCCEEEEEcC-CCEEEEECC
Confidence 2221 1122 35788999999987766544 789999986
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.45 E-value=5.9e-12 Score=118.48 Aligned_cols=196 Identities=13% Similarity=0.019 Sum_probs=128.0
Q ss_pred CCCCeEEEEeeccccccccccCceEEE-----EEcCCCcEEEEEccCCeeEEEecCCCCCCe--EEEEEecCCCEEEEEe
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLA-----LGTSNGDILAVDVLTGEMKWKSTGRHPGGL--AGLAFAKKGRSLHVVG 92 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~-----~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~ 92 (340)
|...+..++|||||+ +|| .|+.+..|++||+.+++.+. .. +...+ ..++|+|||+.|+.++
T Consensus 119 ~~~~~~~~~~SPDG~---------~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~-~~~~~~~~~~~wspDg~~l~~~~ 186 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGK---------KVAFAQKPNAADEAVLHVIDVDSGEWSK--VD-VIEGGKYATPKWTPDSKGFYYEW 186 (695)
T ss_dssp SCEEEEEEEECTTSS---------EEEEEEEETTCSCCEEEEEETTTCCBCS--SC-CBSCCTTCCCEECTTSSEEEEEE
T ss_pred CCEEEEEEEECCCCC---------EEEEEECCCCCceEEEEEEECCCCCCcC--Cc-ccCcccccceEEecCCCEEEEEE
Confidence 445789999999998 777 34445789999999997541 11 21222 6899999999999998
Q ss_pred CCCc-------------EEEEeCCCCe----EEEEeecCCCCeeEEEEccCCCEEEE--ecC----cEEEEECCCCceeE
Q 036605 93 TNGM-------------ASEMKSEMGE----VIREFKASEKPISSSAFLCEEKIFAL--ASS----EVRILSLENGEEVL 149 (340)
Q Consensus 93 ~dg~-------------i~~wd~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~--~~~----~i~i~d~~~~~~~~ 149 (340)
.|.. |++|++.++. .+.....+...+..+.|+|||++|+. .++ .|++++..+++ ..
T Consensus 187 ~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~ 265 (695)
T 2bkl_A 187 LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FR 265 (695)
T ss_dssp CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CE
T ss_pred ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eE
Confidence 8765 9999998876 33333334457889999999998865 233 38888766553 45
Q ss_pred EeecCCCCeEEEEECCCCCEEEEEEc---CCCeEEEEEccCCCCCccCCceeeecC-CCeeeeeecCCCCCCCCEEEEEe
Q 036605 150 KFSDDVGPLQYVSASDGAKIIITAGY---GEKHLQVWRCDISSKTVNKGPALSMRH-SPVAIDCKNSPNGEDGTVILAVA 225 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s~~~~~l~s~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~s 225 (340)
.+..+...+....+ ++|. ++..+. .++.|.+||+ .++.......+...+ ...+..+ .+ . ++.++++..
T Consensus 266 ~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~--~~~~~~~~~~l~~~~~~~~l~~~--~~-~-~~~lv~~~~ 337 (695)
T 2bkl_A 266 LLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDP--AKPARASWKEIVPEDSSASLLSV--SI-V-GGHLSLEYL 337 (695)
T ss_dssp EEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBT--TBCSGGGCEEEECCCSSCEEEEE--EE-E-TTEEEEEEE
T ss_pred EeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeC--CCCCccCCeEEecCCCCCeEEEE--EE-E-CCEEEEEEE
Confidence 55556666666666 5565 444443 2578899987 333211001111122 2223333 33 3 567888889
Q ss_pred CCCcEEEEECC
Q 036605 226 ESGVAYSWDLK 236 (340)
Q Consensus 226 ~dg~i~vwd~~ 236 (340)
.|+..+||.+.
T Consensus 338 ~dg~~~l~~~~ 348 (695)
T 2bkl_A 338 KDATSEVRVAT 348 (695)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEe
Confidence 99988887654
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.44 E-value=8.3e-12 Score=117.51 Aligned_cols=214 Identities=13% Similarity=0.031 Sum_probs=134.8
Q ss_pred CccCCCCcee-eeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCc-------------EEEEEccCCe---
Q 036605 1 IWSTNDGSLL-AEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGD-------------ILAVDVLTGE--- 63 (340)
Q Consensus 1 vwd~~~g~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~-------------i~i~d~~~~~--- 63 (340)
|||+.+|+.+ .... .......++|+|||+ .|+.++.+.. |++|++.++.
T Consensus 151 v~dl~tg~~~~~~~~-----~~~~~~~~~wspDg~---------~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 216 (695)
T 2bkl_A 151 VIDVDSGEWSKVDVI-----EGGKYATPKWTPDSK---------GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD 216 (695)
T ss_dssp EEETTTCCBCSSCCB-----SCCTTCCCEECTTSS---------EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC
T ss_pred EEECCCCCCcCCccc-----CcccccceEEecCCC---------EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc
Confidence 5788888764 2111 011126789999998 8888888776 9999998876
Q ss_pred -eEEEecCCCCCCeEEEEEecCCCEEEEEeCCC----cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----
Q 036605 64 -MKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG----MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS---- 134 (340)
Q Consensus 64 -~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg----~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---- 134 (340)
.+..... |...+..+.|+|||++|+..+.++ .|.+|+..++.. ..+..+...+....+ +++.+++..+
T Consensus 217 ~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~ 293 (695)
T 2bkl_A 217 TVVHERTG-DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAP 293 (695)
T ss_dssp EEEECCCC-CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCT
T ss_pred eEEEecCC-CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCC
Confidence 3333333 566889999999999988877665 778887766653 344445555555555 5666444443
Q ss_pred -CcEEEEECCCCce--eEEeecC--CCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeee
Q 036605 135 -SEVRILSLENGEE--VLKFSDD--VGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDC 209 (340)
Q Consensus 135 -~~i~i~d~~~~~~--~~~~~~~--~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (340)
..|.+||+.++.. ...+..+ ...+..+.|+ ++..+++... |+..+||.++.. +.....+. ......+..+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~-dg~~~l~~~~~~-g~~~~~l~--~~~~~~v~~~ 368 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK-DATSEVRVATLK-GKPVRTVQ--LPGVGAASNL 368 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE-TTEEEEEEEETT-CCEEEECC--CSSSSEECCC
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE-CCEEEEEEEeCC-CCeeEEec--CCCCeEEEEe
Confidence 3399999987653 2344333 3457788887 5555666555 899998887532 22211111 1222233323
Q ss_pred ecCCCCCCCCEEEEEe----CCCcEEEEECCCCC
Q 036605 210 KNSPNGEDGTVILAVA----ESGVAYSWDLKTVS 239 (340)
Q Consensus 210 ~~~~~~~~~~~l~~~s----~dg~i~vwd~~~~~ 239 (340)
.+ ++++..++... ..+.|++||+.+++
T Consensus 369 --~~-s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 369 --MG-LEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp --BS-CTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred --ec-CCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 44 67777666333 34789999998754
No 194
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.42 E-value=1.7e-11 Score=105.98 Aligned_cols=172 Identities=13% Similarity=0.130 Sum_probs=109.0
Q ss_pred CccCCCCceeeeeeCCCCC--CCCCeEEEEeeccccccccccCceEEEEEcC--CCcEEEEEccCCeeEEE-ecCCCCCC
Q 036605 1 IWSTNDGSLLAEWKQPDGE--PVVSYSCLACGFVGKKRRKERGTLLLALGTS--NGDILAVDVLTGEMKWK-STGRHPGG 75 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~--dg~i~i~d~~~~~~~~~-~~~~h~~~ 75 (340)
+||+.+++.+.++...... +......++|+|+|+ +|+++.. ++.|.+||+.+++.+.. +.. .+
T Consensus 85 v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~---------~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~- 152 (361)
T 2oiz_A 85 VWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK---------FIVLQNASPATSIGIVDVAKGDYVEDVTAA--AG- 152 (361)
T ss_dssp EEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS---------EEEEEEESSSEEEEEEETTTTEEEEEEGGG--TT-
T ss_pred EEECcCCcEEEEEEcCccccccCCCcceEEECCCCC---------EEEEECCCCCCeEEEEECCCCcEEEEEecC--CC-
Confidence 4788888877766521000 224566799999998 8887763 68999999999988777 442 11
Q ss_pred eEEEEEecCC-CEEEEEeCCCc------------------------------------------------EEEEeCCCCe
Q 036605 76 LAGLAFAKKG-RSLHVVGTNGM------------------------------------------------ASEMKSEMGE 106 (340)
Q Consensus 76 v~~v~~~~~~-~~l~s~~~dg~------------------------------------------------i~~wd~~~~~ 106 (340)
...+.+.|++ ..+++.+.||. |.++|+..+.
T Consensus 153 ~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~ 232 (361)
T 2oiz_A 153 CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDE 232 (361)
T ss_dssp EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSS
T ss_pred cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCC
Confidence 1112233322 23333333333 4444433221
Q ss_pred E--EEEeecC----------CCCeeEEEEccCCCEEEEec-------------CcEEEEECCCCceeEEeecCCCCeEEE
Q 036605 107 V--IREFKAS----------EKPISSSAFLCEEKIFALAS-------------SEVRILSLENGEEVLKFSDDVGPLQYV 161 (340)
Q Consensus 107 ~--~~~~~~~----------~~~i~~l~~~~~~~~l~~~~-------------~~i~i~d~~~~~~~~~~~~~~~~v~~~ 161 (340)
. ...+... ......++++|++..++++. ..|.+||+.+++.+..+..+. +..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i 310 (361)
T 2oiz_A 233 VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSM 310 (361)
T ss_dssp CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEE
T ss_pred ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEE
Confidence 1 1111100 01112378999988876632 259999999999999998776 8999
Q ss_pred EECCCCCEEEEEEcCCCeEEEEEccCCCC
Q 036605 162 SASDGAKIIITAGYGEKHLQVWRCDISSK 190 (340)
Q Consensus 162 ~~s~~~~~l~s~~~~d~~i~iwd~~~~~~ 190 (340)
+|+|+|++|++++. +.|.+||. .++
T Consensus 311 a~spdg~~l~v~n~--~~v~v~D~--~t~ 335 (361)
T 2oiz_A 311 TIDQQRNLMLTLDG--GNVNVYDI--SQP 335 (361)
T ss_dssp EEETTTTEEEEECS--SCEEEEEC--SSS
T ss_pred EECCCCCEEEEeCC--CeEEEEEC--CCC
Confidence 99999999888553 99999998 455
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=3.9e-11 Score=99.15 Aligned_cols=195 Identities=11% Similarity=0.026 Sum_probs=125.7
Q ss_pred CeEEEEeeccccccccccCceEEE-EEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLA-LGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMK 101 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~-~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd 101 (340)
...+++++++++ +++ +...++.|.+||..++... .+...+...+.+++++++++.+++.. ++.|.+||
T Consensus 25 ~p~~i~~~~~g~---------l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d 93 (270)
T 1rwi_B 25 SPSGVAVDSAGN---------VYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLA 93 (270)
T ss_dssp CEEEEEECTTCC---------EEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEEC
T ss_pred CccceEECCCCC---------EEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEe
Confidence 778999999999 777 5577899999997665432 22222445688999999988555544 88999999
Q ss_pred CCCCeEEEEee-cCCCCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCC
Q 036605 102 SEMGEVIREFK-ASEKPISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEK 178 (340)
Q Consensus 102 ~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~ 178 (340)
...... ..+. .....+..++++++|+++++. ++.|.+|+..+.............+..++++++|+.+++ ...++
T Consensus 94 ~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~-~~~~~ 171 (270)
T 1rwi_B 94 AGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVT-DTDNN 171 (270)
T ss_dssp TTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEE-EGGGT
T ss_pred CCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEE-ECCCC
Confidence 876543 2332 223568899999999877764 345888876655433222223346788999999985555 44378
Q ss_pred eEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 179 HLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 179 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.|.+|+.+ ......... ........+ .+ .++|..+++...++.|.+|+....
T Consensus 172 ~i~~~~~~--~~~~~~~~~---~~~~~p~~i--~~-d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 172 RVVKLEAE--SNNQVVLPF---TDITAPWGI--AV-DEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EEEEECTT--TCCEEECCC---SSCCSEEEE--EE-CTTCCEEEEETTTSCEEEECTTCS
T ss_pred EEEEEecC--CCceEeecc---cCCCCceEE--EE-CCCCCEEEEECCCCcEEEEcCCCC
Confidence 99999973 322111111 111122222 33 678877777777889999998653
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=4.1e-10 Score=94.59 Aligned_cols=204 Identities=12% Similarity=0.078 Sum_probs=132.3
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEM 100 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~w 100 (340)
.--.+..|+|++ . ++++...++.|+.||..+++. ..+. ....+.+++++++|++++ +. +..|.+|
T Consensus 13 ~~~Egp~w~~~~~~---------l~~~d~~~~~i~~~d~~~~~~-~~~~--~~~~~~~i~~~~dG~l~v-~~-~~~l~~~ 78 (297)
T 3g4e_A 13 RCGESPVWEEVSNS---------LLFVDIPAKKVCRWDSFTKQV-QRVT--MDAPVSSVALRQSGGYVA-TI-GTKFCAL 78 (297)
T ss_dssp SBEEEEEEETTTTE---------EEEEETTTTEEEEEETTTCCE-EEEE--CSSCEEEEEEBTTSSEEE-EE-TTEEEEE
T ss_pred ccccCCeEECCCCE---------EEEEECCCCEEEEEECCCCcE-EEEe--CCCceEEEEECCCCCEEE-EE-CCeEEEE
Confidence 345688999965 6 778888899999999988764 3333 456899999999999544 44 5689999
Q ss_pred eCCCCeEEEEeecC----CCCeeEEEEccCCCEEEEe-c----------CcEEEEECCCCceeEEeecCCCCeEEEEECC
Q 036605 101 KSEMGEVIREFKAS----EKPISSSAFLCEEKIFALA-S----------SEVRILSLENGEEVLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 101 d~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~~-~----------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 165 (340)
|..+++........ ...+..++++|+|+++++. . ....+|.+.....+..+..+......++|+|
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL 158 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC
Confidence 99888754333221 2347889999999977753 1 2234554432222333333334568899999
Q ss_pred CCCEEEEEEcCCCeEEEEEccCCCCCccC-Cceeeec-CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 166 GAKIIITAGYGEKHLQVWRCDISSKTVNK-GPALSMR-HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 166 ~~~~l~s~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+++.++.+...++.|.+|+++...+.... .....+. .......+ .+ .++|.+.++...++.|..||..+++.+.
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~--~~-d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGM--CI-DAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEE--EE-BTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCee--EE-CCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 99988777766889999998433332211 1111111 11112222 22 6788877777778889999988766544
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=3e-12 Score=110.38 Aligned_cols=174 Identities=11% Similarity=0.100 Sum_probs=120.8
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-----------eEEEecCCCCCCeEEEEEecCCCEEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-----------MKWKSTGRHPGGLAGLAFAKKGRSLHV 90 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-----------~~~~~~~~h~~~v~~v~~~~~~~~l~s 90 (340)
..+..|++++... ++++|+.++ +.+|+++..+ ..... . +.+ |+.++| +++.|++
T Consensus 38 ~~~nlLais~~~g---------ll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~-lp~-V~~l~f--d~~~L~v 102 (388)
T 1xip_A 38 ASLQNLDISNSKS---------LFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-E-IPD-VIFVCF--HGDQVLV 102 (388)
T ss_dssp SCCBCEEEETTTT---------EEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-E-CTT-EEEEEE--ETTEEEE
T ss_pred ccccEEEEcCCCC---------EEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-e-CCC-eeEEEE--CCCEEEE
Confidence 4689999999998 899998885 6669866433 11222 2 666 999999 8999999
Q ss_pred EeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEE
Q 036605 91 VGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKII 170 (340)
Q Consensus 91 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 170 (340)
+ .++.|++||+.+.........+..++.++.+.+..-.+++.++.|.+||+.++.... +...|++++|+|+| +
T Consensus 103 ~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~ 175 (388)
T 1xip_A 103 S-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--L 175 (388)
T ss_dssp E-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--E
T ss_pred E-cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--e
Confidence 8 889999999987665555666777788877766542223367779999999876543 34589999999999 5
Q ss_pred EEEEcCCCeEEEEEccCCCCCc--cCCc----eee--ecCCCeeeeeecCCCCCCCCEEEE
Q 036605 171 ITAGYGEKHLQVWRCDISSKTV--NKGP----ALS--MRHSPVAIDCKNSPNGEDGTVILA 223 (340)
Q Consensus 171 ~s~~~~d~~i~iwd~~~~~~~~--~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 223 (340)
+.+.. ||.+++|+.+ .++. ...+ .+. ..+...+..+ .| .+++.++++
T Consensus 176 ~vg~~-dg~i~~~~~~--~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI--~w-l~~~~flv~ 230 (388)
T 1xip_A 176 AVLLK-DRSFQSFAWR--NGEMEKQFEFSLPSELEELPVEEYSPLSV--TI-LSPQDFLAV 230 (388)
T ss_dssp EEEET-TSCEEEEEEE--TTEEEEEEEECCCHHHHTSCTTTSEEEEE--EE-SSSSEEEEE
T ss_pred EEEEc-CCcEEEEcCC--CccccccceecCCcccccccCCCeeEEEE--EE-ecCCeEEEE
Confidence 55566 9999999874 3221 1111 000 1245556666 66 566666665
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=2.3e-10 Score=96.63 Aligned_cols=214 Identities=10% Similarity=0.054 Sum_probs=132.7
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeecc-ccccccccCceEEEEEcCCCcEEEEEccCCeeEEE-ecC---CCCCCe
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFV-GKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWK-STG---RHPGGL 76 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~-~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~---~h~~~v 76 (340)
||+.+|+......+...++...+.+++++++ ++ ++++.. .+.|.+||.. ++.... ... .....+
T Consensus 51 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~---------l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 51 IDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ---------LFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp ECTTTCCEEEEECCEETTEECCEEEEEECSSSSE---------EEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred EeCCCCcEEEEEecccCCCCCCCceEEEecCCCc---------EEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 5655665442111100123467889999999 77 555544 4479999988 765433 221 112358
Q ss_pred EEEEEecCCCEEEEEeCC---------------CcEEEEeCCCCeEEEEeecCCCCeeEEEEc----cCCCEEEEe---c
Q 036605 77 AGLAFAKKGRSLHVVGTN---------------GMASEMKSEMGEVIREFKASEKPISSSAFL----CEEKIFALA---S 134 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~d---------------g~i~~wd~~~~~~~~~~~~~~~~i~~l~~~----~~~~~l~~~---~ 134 (340)
.+++++++|+.+++...+ +.|..|+.. ++..... .+......++++ |+++.++.+ +
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCC
Confidence 899999999877776554 578888876 5543332 233456889999 999766543 2
Q ss_pred CcEEEEECC-CCce-----eEEeecCC-CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeee
Q 036605 135 SEVRILSLE-NGEE-----VLKFSDDV-GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAI 207 (340)
Q Consensus 135 ~~i~i~d~~-~~~~-----~~~~~~~~-~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 207 (340)
+.|.+||+. +++. ...+..+. ..+..++++++|..+++... ++.|.+||. .+++....+. .+.....
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-~~~i~~~d~--~~g~~~~~~~---~~~~~~~ 271 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-SSHIEVFGP--DGGQPKMRIR---CPFEKPS 271 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-TTEEEEECT--TCBSCSEEEE---CSSSCEE
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-CCEEEEEcC--CCCcEeEEEe---CCCCCce
Confidence 449999986 4432 22333333 55788999999987776555 889999997 3343322222 1222333
Q ss_pred eeecCCCCCCCCEEEE-EeCCCcEEEEECCC
Q 036605 208 DCKNSPNGEDGTVILA-VAESGVAYSWDLKT 237 (340)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~s~dg~i~vwd~~~ 237 (340)
.+ .+ ++++..|++ ...++.|..|++..
T Consensus 272 ~i--~~-~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 272 NL--HF-KPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EE--EE-CTTSSEEEEEETTTTEEEEEECSS
T ss_pred eE--EE-CCCCCEEEEEeCCCCeEEEEeCCC
Confidence 33 44 788885554 45567899999865
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.35 E-value=5.7e-11 Score=112.60 Aligned_cols=215 Identities=13% Similarity=0.071 Sum_probs=131.2
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCc--------------EEEEEccCCee--
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGD--------------ILAVDVLTGEM-- 64 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~--------------i~i~d~~~~~~-- 64 (340)
|||+.+|+.+.... +...+..++|+|| + .|+.++.++. |++|++.++..
T Consensus 193 v~dl~tg~~~~~~~-----~~~~~~~~~wspD-~---------~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~ 257 (741)
T 1yr2_A 193 FVGVADGKPLADEL-----KWVKFSGLAWLGN-D---------ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD 257 (741)
T ss_dssp EEETTTCCEEEEEE-----EEEESCCCEESTT-S---------EEEEEECCCC--------CCCCCEEEEEETTSCGGGC
T ss_pred EEECCCCCCCCccC-----CCceeccEEEECC-C---------EEEEEEecCcccccccccCCCCCEEEEEECCCCchhC
Confidence 47888887654321 1122357899999 8 7887776654 88999877652
Q ss_pred EEEecC-CCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEeCCCCeE--EEEeecCCCCeeEEEEccCCCEEEEec--
Q 036605 65 KWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNG-----MASEMKSEMGEV--IREFKASEKPISSSAFLCEEKIFALAS-- 134 (340)
Q Consensus 65 ~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~--~~~~~~~~~~i~~l~~~~~~~~l~~~~-- 134 (340)
...+.. .+...+..+.|+|||++|+..+.++ .|.+||+.++.. ...+..+....... ++|+|..|+...
T Consensus 258 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 258 QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGD 336 (741)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECT
T ss_pred EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECC
Confidence 222322 1444689999999999888877543 899999987731 34455454444444 358888776632
Q ss_pred ----CcEEEEECCCCc-eeEEe-ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 135 ----SEVRILSLENGE-EVLKF-SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 135 ----~~i~i~d~~~~~-~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
..|.+||+.++. ....+ ..+...+..+.++ ++..+++... |+..+||.++.. +.....+. ......+..
T Consensus 337 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~-dg~~~l~~~~~~-g~~~~~l~--~~~~~~v~~ 411 (741)
T 1yr2_A 337 GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIH-DAKSQVLAFDLD-GKPAGAVS--LPGIGSASG 411 (741)
T ss_dssp TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEE-TTEEEEEEEETT-SCEEEECB--CSSSCEEEE
T ss_pred CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEE-CCEEEEEEEeCC-CCceeecc--CCCCeEEEE
Confidence 229999998752 33333 4444556677776 4445555444 888888877532 22222221 122233333
Q ss_pred eecCCCCCCCCEEEEE-e---CCCcEEEEECCCCC
Q 036605 209 CKNSPNGEDGTVILAV-A---ESGVAYSWDLKTVS 239 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~-s---~dg~i~vwd~~~~~ 239 (340)
+ .+ ++++..++.. + ..+.|++||+.+++
T Consensus 412 ~--~~-s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 412 L--SG-RPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp E--EC-CBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred e--ec-CCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 3 34 5676655532 2 34789999998754
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=8.2e-10 Score=96.98 Aligned_cols=194 Identities=13% Similarity=0.058 Sum_probs=130.2
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCC--cEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG--MASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg--~i~~ 99 (340)
.....|+|+|+++ ++++...++.|++||..++........ .. ... ++|+++++.|++++.++ .|.+
T Consensus 131 ~~P~~la~d~~g~---------lyv~d~~~~~I~~id~~~g~~~~~~~~-~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~ 198 (409)
T 3hrp_A 131 KYMWGIAAVGNNT---------VLAYQRDDPRVRLISVDDNKVTTVHPG-FK-GGK-PAVTKDKQRVYSIGWEGTHTVYV 198 (409)
T ss_dssp CCEEEEEECSTTE---------EEEEETTTTEEEEEETTTTEEEEEEET-CC-BCB-CEECTTSSEEEEEBSSTTCEEEE
T ss_pred CCceEEEEeCCCC---------EEEEecCCCcEEEEECCCCEEEEeecc-CC-CCc-eeEecCCCcEEEEecCCCceEEE
Confidence 3578999999999 888888889999999988876544443 22 233 99999999999988866 7999
Q ss_pred EeCCCCeEEEEe---ec-CCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEE----eecCCCCe--EEEEECCCC
Q 036605 100 MKSEMGEVIREF---KA-SEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLK----FSDDVGPL--QYVSASDGA 167 (340)
Q Consensus 100 wd~~~~~~~~~~---~~-~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~----~~~~~~~v--~~~~~s~~~ 167 (340)
|+...+.....+ .. ....+.+++++|++..|++++. .|+.||..++..... ..++...- ..++|+|++
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTT
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCC
Confidence 998766543333 12 3456789999995444444443 499999987753222 12222222 399999975
Q ss_pred CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecC-----------------CCeeeeeecCCCCCCCCEEEEEe-CCCc
Q 036605 168 KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRH-----------------SPVAIDCKNSPNGEDGTVILAVA-ESGV 229 (340)
Q Consensus 168 ~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~s-~dg~ 229 (340)
..|+.+....+.|+.|+.+ . .. ..+ .+. .+.-+.+ .++|.++++-+ .+++
T Consensus 279 g~lyv~d~~~~~I~~~~~~--g-~~-~~~---~g~~~~~g~~dg~~~~~~~~~P~gia~-----d~dG~lyvad~~~~~~ 346 (409)
T 3hrp_A 279 SNFYMSDQNLSSVYKITPD--G-EC-EWF---CGSATQKTVQDGLREEALFAQPNGMTV-----DEDGNFYIVDGFKGYC 346 (409)
T ss_dssp TEEEEEETTTTEEEEECTT--C-CE-EEE---EECTTCCSCBCEEGGGCBCSSEEEEEE-----CTTCCEEEEETTTTCE
T ss_pred CEEEEEeCCCCEEEEEecC--C-CE-EEE---EeCCCCCCcCCCcccccEeCCCeEEEE-----eCCCCEEEEeCCCCCE
Confidence 6666666668899999863 2 11 100 011 1222333 78888777777 7889
Q ss_pred EEEEECCCCC
Q 036605 230 AYSWDLKTVS 239 (340)
Q Consensus 230 i~vwd~~~~~ 239 (340)
|+.|++.++.
T Consensus 347 I~~~~~~~G~ 356 (409)
T 3hrp_A 347 LRKLDILDGY 356 (409)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCE
Confidence 9999976543
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.31 E-value=3.7e-09 Score=88.31 Aligned_cols=193 Identities=7% Similarity=0.041 Sum_probs=130.1
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeE-EEecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMK-WKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
....+.++++.+++. ++++...++.|..||.. ++.. ..+.. ....+.++++++++..+++...++.|.
T Consensus 55 ~~~~~~~i~~~~~g~---------l~v~~~~~~~i~~~~~~-g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~ 123 (299)
T 2z2n_A 55 PDAKVMCLTISSDGE---------VWFTENAANKIGRITKK-GIIKEYTLPN-PDSAPYGITEGPNGDIWFTEMNGNRIG 123 (299)
T ss_dssp TTCCEEEEEECTTSC---------EEEEETTTTEEEEECTT-SCEEEEECSS-TTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred ccCceeeEEECCCCC---------EEEeCCCCCeEEEECCC-CcEEEEeCCC-cCCCceeeEECCCCCEEEEecCCceEE
Confidence 346788999999998 77777778899999976 4332 22222 455789999999998777766788999
Q ss_pred EEeCCCCeEEEE-eecCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEE-eecCCCCeEEEEECCCCCEEEEEE
Q 036605 99 EMKSEMGEVIRE-FKASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLK-FSDDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 99 ~wd~~~~~~~~~-~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
+||. +++.... .......+..+++.+++.++++.. +.|..||. +++.... +......+..+++++++...++ .
T Consensus 124 ~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~-~ 200 (299)
T 2z2n_A 124 RITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFV-E 200 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEE-E
T ss_pred EECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEE-c
Confidence 9998 5554432 222345688999999998877653 45999998 6654332 2334456889999999986555 4
Q ss_pred cCCCeEEEEEccCCCCCccCCceeeec-CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 175 YGEKHLQVWRCDISSKTVNKGPALSMR-HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 175 ~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
..++.|.+|+. .+... . +... .......+ .+ .++|..+++...++.|..||.
T Consensus 201 ~~~~~i~~~~~---~g~~~-~--~~~~~~~~~~~~i--~~-~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 201 IIGNKIGRITT---SGEIT-E--FKIPTPNARPHAI--TA-GAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTTTEEEEECT---TCCEE-E--EECSSTTCCEEEE--EE-CSTTCEEEEETTTTEEEEEET
T ss_pred cCCceEEEECC---CCcEE-E--EECCCCCCCceeE--EE-CCCCCEEEeccCCceEEEECC
Confidence 43788999986 22211 1 1111 11222222 33 677876666657788999997
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.31 E-value=4.2e-09 Score=87.99 Aligned_cols=198 Identities=7% Similarity=0.055 Sum_probs=131.9
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
.+...+.++++.++++ ++++...++.|.+||.. ++........+...+.++++++++..+++...++.|.
T Consensus 12 ~~~~~~~~i~~d~~g~---------l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK---------VWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp SSSCCEEEEEECTTSC---------EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcCCCccceEECCCCC---------EEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEE
Confidence 3456899999999999 67766668899999988 6543322111456799999999998777766688999
Q ss_pred EEeCCCCeEEEEee--cCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeE-EeecCCCCeEEEEECCCCCEEEEE
Q 036605 99 EMKSEMGEVIREFK--ASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVL-KFSDDVGPLQYVSASDGAKIIITA 173 (340)
Q Consensus 99 ~wd~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~ 173 (340)
.||.. ++. ..+. .....+..+++.+++.++++.. +.|..||. +++... ........+..+++++++...++
T Consensus 82 ~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~- 157 (299)
T 2z2n_A 82 RITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFT- 157 (299)
T ss_dssp EECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEE-
T ss_pred EECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEE-
Confidence 99986 443 2232 2345688999999998887753 45999998 554332 22334456899999999976665
Q ss_pred EcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 174 GYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
...++.|..||. .++... .... ........+ .+ .+++..+++...++.|.+|+. ++.
T Consensus 158 ~~~~~~i~~~~~---~g~~~~-~~~~-~~~~~~~~i--~~-~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 158 ENQNNAIGRITE---SGDITE-FKIP-TPASGPVGI--TK-GNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp ETTTTEEEEECT---TCCEEE-EECS-STTCCEEEE--EE-CTTSSEEEEETTTTEEEEECT-TCC
T ss_pred eCCCCEEEEEcC---CCcEEE-eeCC-CCCCcceeE--EE-CCCCCEEEEccCCceEEEECC-CCc
Confidence 443788988886 222111 1100 111112222 23 677887777667888999998 443
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=5.6e-11 Score=102.51 Aligned_cols=136 Identities=10% Similarity=0.058 Sum_probs=107.8
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
+.. |+.++| ++. +|+++ .++.|++||+.+......... |...+.++.+.+. .++++..||.|.+
T Consensus 87 lp~-V~~l~f--d~~---------~L~v~-~~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p--~~av~~~dG~L~v 150 (388)
T 1xip_A 87 IPD-VIFVCF--HGD---------QVLVS-TRNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNN--TLVILNSVNDLSA 150 (388)
T ss_dssp CTT-EEEEEE--ETT---------EEEEE-ESSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSS--EEEEEETTSEEEE
T ss_pred CCC-eeEEEE--CCC---------EEEEE-cCCcEEEEEchhhhccCccce-eecceeeEEecCC--CEEEEECCCCEEE
Confidence 345 999999 888 89998 889999999887665555555 7778988887754 3888999999999
Q ss_pred EeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCcEEEEECCCCce--eEEe------e---cCCCCeEEEEECCCCC
Q 036605 100 MKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSEVRILSLENGEE--VLKF------S---DDVGPLQYVSASDGAK 168 (340)
Q Consensus 100 wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~ 168 (340)
||+.++.... +...|++++|+|+|..+...++++++|+...+.. ...+ . +|...|.++.|.+++.
T Consensus 151 ~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 151 LDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred EEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 9999887643 2347999999999966666788899999887764 4445 2 3678899999999998
Q ss_pred EEEEEEc
Q 036605 169 IIITAGY 175 (340)
Q Consensus 169 ~l~s~~~ 175 (340)
++++-..
T Consensus 227 flv~y~~ 233 (388)
T 1xip_A 227 FLAVFGN 233 (388)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 8887544
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.30 E-value=1.6e-09 Score=95.08 Aligned_cols=165 Identities=12% Similarity=0.022 Sum_probs=108.8
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCC--cEEEEEccCCeeEEEe----cCCCCCC
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNG--DILAVDVLTGEMKWKS----TGRHPGG 75 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg--~i~i~d~~~~~~~~~~----~~~h~~~ 75 (340)
||+.++.+..... .... .. ++|+|+++ +|+++..++ .|.+|+...+.....+ .. ....
T Consensus 157 id~~~g~~~~~~~----~~~~-~~-ia~~~~g~---------~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~-~~~~ 220 (409)
T 3hrp_A 157 ISVDDNKVTTVHP----GFKG-GK-PAVTKDKQ---------RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST-FSGK 220 (409)
T ss_dssp EETTTTEEEEEEE----TCCB-CB-CEECTTSS---------EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT-SCSC
T ss_pred EECCCCEEEEeec----cCCC-Cc-eeEecCCC---------cEEEEecCCCceEEEEEcCCCceeEEeeeccch-hcCC
Confidence 5666666554443 2222 23 89999998 788887766 7999998776543344 21 3456
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEE----eecCCCCe-e-EEEEccCCCEEEEec---CcEEEEECCCCc
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIRE----FKASEKPI-S-SSAFLCEEKIFALAS---SEVRILSLENGE 146 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~----~~~~~~~i-~-~l~~~~~~~~l~~~~---~~i~i~d~~~~~ 146 (340)
+.+++++|++..|+.+..++.|..||..++..... .......- . .++|+|++..|+.++ +.|+.|+....
T Consensus 221 p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~- 299 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE- 299 (409)
T ss_dssp CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-
T ss_pred cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-
Confidence 78999999666777777889999999987764322 11222111 3 999999655554433 33999987643
Q ss_pred eeEEeecCC---------------CCeEEEEECCCCCEEEEEEc-CCCeEEEEEc
Q 036605 147 EVLKFSDDV---------------GPLQYVSASDGAKIIITAGY-GEKHLQVWRC 185 (340)
Q Consensus 147 ~~~~~~~~~---------------~~v~~~~~s~~~~~l~s~~~-~d~~i~iwd~ 185 (340)
+..+.++. .....++++++|..+++ .. .++.|+.|++
T Consensus 300 -~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva-d~~~~~~I~~~~~ 352 (409)
T 3hrp_A 300 -CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV-DGFKGYCLRKLDI 352 (409)
T ss_dssp -EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE-ETTTTCEEEEEET
T ss_pred -EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE-eCCCCCEEEEEEC
Confidence 33333322 34789999999985555 55 5899999996
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.30 E-value=1e-10 Score=110.80 Aligned_cols=195 Identities=12% Similarity=0.029 Sum_probs=124.8
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCC-----CcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCC
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSN-----GDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG 95 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg 95 (340)
...+..++|||||+ +||.++.+ ..|++||+.+++.+.... +...+..++|+|| +.|+.++.++
T Consensus 162 ~~~~~~~~~SPDG~---------~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 162 ATALDAWAASDDGR---------LLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp -EEEEEEEECTTSS---------EEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCC
T ss_pred CEEEEeEEECCCCC---------EEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEEEEEecC
Confidence 34688999999998 78776543 369999999998654321 2222357899999 9888887664
Q ss_pred c--------------EEEEeCCCCeE--EEEeec--CCCCeeEEEEccCCCEEEEec--C-----cEEEEECCCC--cee
Q 036605 96 M--------------ASEMKSEMGEV--IREFKA--SEKPISSSAFLCEEKIFALAS--S-----EVRILSLENG--EEV 148 (340)
Q Consensus 96 ~--------------i~~wd~~~~~~--~~~~~~--~~~~i~~l~~~~~~~~l~~~~--~-----~i~i~d~~~~--~~~ 148 (340)
. |++|++.++.. ...+.. +...+..+.|+|||++|+... + .|++||+.++ +..
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 3 89999877652 222322 223578999999999886522 2 4999999877 314
Q ss_pred EEeecCCCCeEEEEECCCCCEEEEEEcC---CCeEEEEEccCCCCC-ccCCceeeecCCCeeeeeecCCCCCCCCEEEEE
Q 036605 149 LKFSDDVGPLQYVSASDGAKIIITAGYG---EKHLQVWRCDISSKT-VNKGPALSMRHSPVAIDCKNSPNGEDGTVILAV 224 (340)
Q Consensus 149 ~~~~~~~~~v~~~~~s~~~~~l~s~~~~---d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (340)
..+..+...+.... +|+|..|+..+.. .+.|.+||+ ..+. ....+. ..+...+..+ .+ . ++.++++.
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~--~~~~~~~~~l~--~~~~~~l~~~--~~-~-~~~lv~~~ 380 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDL--SGSTPRFDTVV--PESKDNLESV--GI-A-GNRLFASY 380 (741)
T ss_dssp EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEEC--SSSSCEEEEEE--CCCSSEEEEE--EE-E-BTEEEEEE
T ss_pred EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeC--CCCccccEEEe--cCCCCeEEEE--EE-E-CCEEEEEE
Confidence 55655555555554 4888888876652 345888887 3321 111111 1222222233 33 2 55677888
Q ss_pred eCCCcEEEEECC
Q 036605 225 AESGVAYSWDLK 236 (340)
Q Consensus 225 s~dg~i~vwd~~ 236 (340)
..||..+||.+.
T Consensus 381 ~~dg~~~l~~~~ 392 (741)
T 1yr2_A 381 IHDAKSQVLAFD 392 (741)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCEEEEEEEe
Confidence 889887777554
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.29 E-value=7.7e-10 Score=93.36 Aligned_cols=203 Identities=14% Similarity=0.104 Sum_probs=130.6
Q ss_pred CCeEEEEeeccccccccccCceEEEE-------EcCCCcEEEEEccCCeeEEEec---CCCCCCeEEEEEecCCCEEEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLAL-------GTSNGDILAVDVLTGEMKWKST---GRHPGGLAGLAFAKKGRSLHVV 91 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~-------g~~dg~i~i~d~~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~ 91 (340)
....+++|+++++ ++++ +..++.|.+||..+++...... ..+...+.++++++++..|+.+
T Consensus 18 ~~~~~~~~~~~g~---------l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 18 PGAEGPVFDKNGD---------FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp TTCEEEEECTTSC---------EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE
T ss_pred CCccCceECCCCC---------EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE
Confidence 3567899999998 7777 5778999999988887543222 0144678999999983344445
Q ss_pred eCCCcEEEEeCCCCeEEEE-eec----CCCCeeEEEEccCCCEEEEec-----------------CcEEEEECCCCceeE
Q 036605 92 GTNGMASEMKSEMGEVIRE-FKA----SEKPISSSAFLCEEKIFALAS-----------------SEVRILSLENGEEVL 149 (340)
Q Consensus 92 ~~dg~i~~wd~~~~~~~~~-~~~----~~~~i~~l~~~~~~~~l~~~~-----------------~~i~i~d~~~~~~~~ 149 (340)
+....|.+||.. ++.... ... ....+.+++++++|+++++.. +.|..||.. ++. .
T Consensus 89 ~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~ 165 (314)
T 1pjx_A 89 DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-I 165 (314)
T ss_dssp ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-E
T ss_pred ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-E
Confidence 555579999998 765433 221 123478999999998887753 237777765 443 3
Q ss_pred EeecCCCCeEEEEEC----CCCCEEEEEEcCCCeEEEEEccCCCCCccCC-ceeeec-CC-CeeeeeecCCCCCCCCEEE
Q 036605 150 KFSDDVGPLQYVSAS----DGAKIIITAGYGEKHLQVWRCDISSKTVNKG-PALSMR-HS-PVAIDCKNSPNGEDGTVIL 222 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s----~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~l~ 222 (340)
.+..+......++|+ ++++.++.+...++.|.+|+++ ..+..... ....+. +. .....+ .+ .++|.+++
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~-~~g~~~~~~~~~~~~~~~~~~p~~i--~~-d~~G~l~v 241 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK-GPAKIENKKVWGHIPGTHEGGADGM--DF-DEDNNLLV 241 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE-ETTEEEEEEEEEECCCCSSCEEEEE--EE-BTTCCEEE
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC-CCCccccceEEEECCCCCCCCCCce--EE-CCCCCEEE
Confidence 332333456889999 9998777766557899999974 12211000 000111 11 122222 33 67888888
Q ss_pred EEeCCCcEEEEECCCCCc
Q 036605 223 AVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 223 ~~s~dg~i~vwd~~~~~~ 240 (340)
+...++.|.+||..+++.
T Consensus 242 ~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp EEETTTEEEEECTTCBSC
T ss_pred EEcCCCEEEEEcCCCCcE
Confidence 777888999999875543
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.26 E-value=2.6e-10 Score=107.23 Aligned_cols=198 Identities=8% Similarity=0.081 Sum_probs=125.7
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEE-----cCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALG-----TSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN 94 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g-----~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d 94 (340)
+...+..++|||||+ +||.+ +....|++||+.+++.+.... +......++|+ |++.|+.++.+
T Consensus 127 ~~~~l~~~~~SpDg~---------~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR---------ILAYSLSLAGSDWREIHLMDVESKQPLETPL--KDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp SCCEEEEEEECTTSS---------EEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EEEESCCCEEE-TTTEEEEEESS
T ss_pred CcEEEEEEEECCCCC---------EEEEEEecCCCceEEEEEEECCCCCCCcccc--CCceeccEEEe-CCCEEEEEEec
Confidence 455788899999998 77743 333579999999998554311 11113577899 99999888877
Q ss_pred C-------------cEEEEeCCCCe----EEEEeec-CCCCeeEEEEccCCCEEEEe-c-----CcEEEEECCCCc-eeE
Q 036605 95 G-------------MASEMKSEMGE----VIREFKA-SEKPISSSAFLCEEKIFALA-S-----SEVRILSLENGE-EVL 149 (340)
Q Consensus 95 g-------------~i~~wd~~~~~----~~~~~~~-~~~~i~~l~~~~~~~~l~~~-~-----~~i~i~d~~~~~-~~~ 149 (340)
. .|++|++.++. .+..... +......+.++|||++|+.. . ..|+++|+.++. ...
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 4 39999987754 2222233 34456789999999988551 1 249999998764 455
Q ss_pred EeecCCCCeEEEEECCCCCEEEEEEcCC---CeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeC
Q 036605 150 KFSDDVGPLQYVSASDGAKIIITAGYGE---KHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAE 226 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s~~~~~l~s~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~ 226 (340)
.+..+....... ++++|..|+..+..+ +.|..+++ ..+.......+ ..+......+ ++++.+|+....
T Consensus 275 ~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~--~~~~~~~~~~l-~~~~~~~~~~-----s~~g~~lv~~~~ 345 (693)
T 3iuj_A 275 TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDA--ANPGPAHWRDL-IPERQQVLTV-----HSGSGYLFAEYM 345 (693)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEET--TSCCGGGCEEE-ECCCSSCEEE-----EEETTEEEEEEE
T ss_pred EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC--CCCCccccEEE-ecCCCCEEEE-----EEECCEEEEEEE
Confidence 666666655555 566666666555433 56888887 33322100111 1333332233 677777766655
Q ss_pred CC---cEEEEECCCC
Q 036605 227 SG---VAYSWDLKTV 238 (340)
Q Consensus 227 dg---~i~vwd~~~~ 238 (340)
++ .|++|++...
T Consensus 346 ~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 346 VDATARVEQFDYEGK 360 (693)
T ss_dssp ETTEEEEEEECTTSC
T ss_pred ECCeeEEEEEECCCC
Confidence 43 6888988753
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.25 E-value=9.1e-09 Score=87.54 Aligned_cols=193 Identities=9% Similarity=-0.004 Sum_probs=125.6
Q ss_pred CeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 036605 23 SYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMK 101 (340)
Q Consensus 23 ~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd 101 (340)
-..+.+|+|++ . +++++..++.|..||..+++.. .+. ....+.+++|+++|+++++. .+ .|.+||
T Consensus 50 ~~egp~~~~~~~~---------l~~~d~~~~~i~~~d~~~~~~~-~~~--~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d 115 (326)
T 2ghs_A 50 LGEGPTFDPASGT---------AWWFNILERELHELHLASGRKT-VHA--LPFMGSALAKISDSKQLIAS-DD-GLFLRD 115 (326)
T ss_dssp BEEEEEEETTTTE---------EEEEEGGGTEEEEEETTTTEEE-EEE--CSSCEEEEEEEETTEEEEEE-TT-EEEEEE
T ss_pred CCcCCeEeCCCCE---------EEEEECCCCEEEEEECCCCcEE-EEE--CCCcceEEEEeCCCeEEEEE-CC-CEEEEE
Confidence 34678999975 5 7778888899999999887643 333 34679999999999876654 44 499999
Q ss_pred CCCCeEEEEeecC----CCCeeEEEEccCCCEEEEec--------CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCE
Q 036605 102 SEMGEVIREFKAS----EKPISSSAFLCEEKIFALAS--------SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKI 169 (340)
Q Consensus 102 ~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~~~--------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 169 (340)
..+++........ ...+..++++|+|+++++.. +.|+.++ +++ +..+..+......++|+|+++.
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~~~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTKLFADISIPNSICFSPDGTT 192 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEEEEEESSEEEEEECTTSCE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEEeeCCCcccCCeEEcCCCCE
Confidence 9888754332211 13478999999999776642 2366666 453 3333333345678999999998
Q ss_pred EEEEEcCCCeEEEEEccCCCC-CccCCcee-eec-CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 170 IITAGYGEKHLQVWRCDISSK-TVNKGPAL-SMR-HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 170 l~s~~~~d~~i~iwd~~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
++.+...++.|.+|+++...+ .......+ .+. .......+ .+ .++|.++++...++.|.+|+.
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi--~~-d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGS--VC-DAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEE--EE-CTTSCEEEEEETTTEEEEECT
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCee--EE-CCCCCEEEEEeCCCEEEEECC
Confidence 877666578999999841133 21111111 111 11112222 23 677777776666788999987
No 209
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.24 E-value=3.8e-09 Score=91.60 Aligned_cols=186 Identities=9% Similarity=0.039 Sum_probs=126.9
Q ss_pred EEEEEcCCCcEEEEEccCC----eeEEEec------CCCCCCeEEEEEecCCCEEEEEeCC------CcEEEEeCCCCeE
Q 036605 44 LLALGTSNGDILAVDVLTG----EMKWKST------GRHPGGLAGLAFAKKGRSLHVVGTN------GMASEMKSEMGEV 107 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~----~~~~~~~------~~h~~~v~~v~~~~~~~~l~s~~~d------g~i~~wd~~~~~~ 107 (340)
+++.|..++.|+++|+.+. +....+. ......-..+...|+| .++++..+ |.|.++|..+++.
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 5666778899999998755 5555552 1011134567788999 76666554 7899999999999
Q ss_pred EEEeecCCCC---eeEEEEccCCCEEEEec---------------------CcEEEEECCCCceeEEeecC-C-CCeEEE
Q 036605 108 IREFKASEKP---ISSSAFLCEEKIFALAS---------------------SEVRILSLENGEEVLKFSDD-V-GPLQYV 161 (340)
Q Consensus 108 ~~~~~~~~~~---i~~l~~~~~~~~l~~~~---------------------~~i~i~d~~~~~~~~~~~~~-~-~~v~~~ 161 (340)
+.++.....+ -+.+.|+|+++.+++.+ ..|.+||+.+++.+.++... . .....+
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALEL 256 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcccee
Confidence 9998743222 35688899999998863 45999999998877777542 1 234556
Q ss_pred EE--CCCCCEEEEEEc-----CCCeEEEEEccCCCCCccCCceeee-------------------cCCCeeeeeecCCCC
Q 036605 162 SA--SDGAKIIITAGY-----GEKHLQVWRCDISSKTVNKGPALSM-------------------RHSPVAIDCKNSPNG 215 (340)
Q Consensus 162 ~~--s~~~~~l~s~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 215 (340)
.| +|++++++.++. .++.|.+|..+ .+.......+.+ ...+..+.+ +
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d--~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l-----S 329 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE--DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI-----S 329 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEE--TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE-----C
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEec--CCceeEEEEEeCCCccccccccccccccccCCCceeEEEE-----C
Confidence 56 999999998887 68899887763 121110000000 111223334 8
Q ss_pred CCCCEEEEEeC-CCcEEEEECCC
Q 036605 216 EDGTVILAVAE-SGVAYSWDLKT 237 (340)
Q Consensus 216 ~~~~~l~~~s~-dg~i~vwd~~~ 237 (340)
+||++|+++.. .+.|.+||+..
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEeCCCCEEEEEEecC
Confidence 99999988776 57899999864
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.23 E-value=5.8e-10 Score=97.47 Aligned_cols=218 Identities=10% Similarity=-0.001 Sum_probs=140.9
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc----------CCCcEEEEEccCCeeEEEecC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT----------SNGDILAVDVLTGEMKWKSTG 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~----------~dg~i~i~d~~~~~~~~~~~~ 70 (340)
|+|+.+++++.++... ..+ .++++||++ +|+++. .++.|.++|..+++.+..+.-
T Consensus 103 VID~~t~~vv~~I~vG----~~P--gia~SpDgk---------~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v 167 (426)
T 3c75_H 103 VIDGSTGRILGMTDGG----FLP--HPVAAEDGS---------FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL 167 (426)
T ss_dssp EEETTTTEEEEEEEEC----SSC--EEEECTTSS---------CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCCCEEEEEEECC----CCC--ceEECCCCC---------EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC
Confidence 4678888888888722 234 799999997 666665 467899999999998877642
Q ss_pred C---C---CCCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCeEEEEeecCCC-------CeeEEEEccCCCEEEEec-
Q 036605 71 R---H---PGGLAGLAFAKKGRSLHVVGT--NGMASEMKSEMGEVIREFKASEK-------PISSSAFLCEEKIFALAS- 134 (340)
Q Consensus 71 ~---h---~~~v~~v~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~-------~i~~l~~~~~~~~l~~~~- 134 (340)
. . ......++|+|||++|+.+.. ++.|.++|+.+++.+..+..... .-..+.++++|++++...
T Consensus 168 ~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 168 PDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp TTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECC
T ss_pred CCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECC
Confidence 1 0 124567899999999999874 57899999999998877654211 011234455555443311
Q ss_pred --------------------------------------CcEEEEECCCCcee--EEeec----------CCCCeEEEEEC
Q 036605 135 --------------------------------------SEVRILSLENGEEV--LKFSD----------DVGPLQYVSAS 164 (340)
Q Consensus 135 --------------------------------------~~i~i~d~~~~~~~--~~~~~----------~~~~v~~~~~s 164 (340)
+.+.+.|+...... ..+.. .......++++
T Consensus 248 ~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s 327 (426)
T 3c75_H 248 DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH 327 (426)
T ss_dssp TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE
T ss_pred CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc
Confidence 12444444332211 11100 01112236889
Q ss_pred CCCCEEEEEEc---------CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCC-EEEEEe-CCCcEEEE
Q 036605 165 DGAKIIITAGY---------GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGT-VILAVA-ESGVAYSW 233 (340)
Q Consensus 165 ~~~~~l~s~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~s-~dg~i~vw 233 (340)
+++..++.+.. ..+.|.++|. .+.+....+. .+..+..+.+ ++++. ++++.. .++.|.++
T Consensus 328 ~dg~rlyVa~~~~~~gthk~~s~~VsVID~--~T~kvv~~I~--vg~~P~gia~-----spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 328 RQSDRIYLLVDQRDEWKHKAASRFVVVLNA--ETGERINKIE--LGHEIDSINV-----SQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp GGGTEEEEEEEECCTTCTTSCEEEEEEEET--TTCCEEEEEE--EEEEECEEEE-----CCSSSCEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEecccccccccCCCCEEEEEEC--CCCeEEEEEE--CCCCcCeEEE-----ccCCCEEEEEEcCCCCeEEEE
Confidence 99888777643 1357999998 5555444333 3444555555 89998 888888 58999999
Q ss_pred ECCCCCccC
Q 036605 234 DLKTVSQDE 242 (340)
Q Consensus 234 d~~~~~~~~ 242 (340)
|..+.+.+.
T Consensus 399 D~~t~kvv~ 407 (426)
T 3c75_H 399 DAATGEELR 407 (426)
T ss_dssp ETTTCCEEE
T ss_pred ECCCCCEEE
Confidence 999987765
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=4.6e-09 Score=88.11 Aligned_cols=185 Identities=10% Similarity=0.050 Sum_probs=112.9
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC---CCCCCeEEEEEecCCCEEEEEeC----
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG---RHPGGLAGLAFAKKGRSLHVVGT---- 93 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~~~---- 93 (340)
...+.+++++|+++ ++++ . ++.|.+||..+++....... .....+++++++|+|+.+++...
T Consensus 53 ~~~~~~i~~~~dG~---------l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~ 121 (297)
T 3g4e_A 53 DAPVSSVALRQSGG---------YVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA 121 (297)
T ss_dssp SSCEEEEEEBTTSS---------EEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB
T ss_pred CCceEEEEECCCCC---------EEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc
Confidence 46789999999999 5554 3 56799999988875432221 01235789999999996665422
Q ss_pred -------CCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec---CcEEEEEC--CCCcee-----EEeecCCC
Q 036605 94 -------NGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS---SEVRILSL--ENGEEV-----LKFSDDVG 156 (340)
Q Consensus 94 -------dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~--~~~~~~-----~~~~~~~~ 156 (340)
.+.|..++.. ++... +.........++|+|+++.++.++ +.|.+||+ .++... ..+..+..
T Consensus 122 ~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~ 199 (297)
T 3g4e_A 122 PAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ 199 (297)
T ss_dssp TTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC
T ss_pred cccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC
Confidence 2345555543 44332 222334568899999999776543 44999987 455432 22233345
Q ss_pred CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeC
Q 036605 157 PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAE 226 (340)
Q Consensus 157 ~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~ 226 (340)
....++++++|...++... .+.|.+||. .+++....+. ........+ +|..+++..|+..+.
T Consensus 200 ~p~g~~~d~~G~lwva~~~-~~~v~~~d~--~tG~~~~~i~---~p~~~~t~~--~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 200 IPDGMCIDAEGKLWVACYN-GGRVIRLDP--VTGKRLQTVK---LPVDKTTSC--CFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEEEBTTSCEEEEEET-TTEEEEECT--TTCCEEEEEE---CSSSBEEEE--EEESGGGCEEEEEEB
T ss_pred CCCeeEECCCCCEEEEEcC-CCEEEEEcC--CCceEEEEEE---CCCCCceEE--EEeCCCCCEEEEEcC
Confidence 6788999999976666444 788999997 4454433332 111233333 442366665554443
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=1.3e-09 Score=93.71 Aligned_cols=192 Identities=9% Similarity=-0.021 Sum_probs=126.0
Q ss_pred EEeeccccccccccCceEEEEEcC-----CCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe---------
Q 036605 27 LACGFVGKKRRKERGTLLLALGTS-----NGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG--------- 92 (340)
Q Consensus 27 l~~sp~~~~~~~~~~~~~l~~g~~-----dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--------- 92 (340)
....|+++ .+++... ++.|.++|..+++.+.++.. ...+ .++++|||+.||+++
T Consensus 38 ~~~~pd~~---------~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-G~~P--~va~spDG~~lyVan~~~~r~~~G 105 (386)
T 3sjl_D 38 EAPAPDAR---------RVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-GFLP--NPVVADDGSFIAHASTVFSRIARG 105 (386)
T ss_dssp CCCCCCTT---------EEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-CSSC--EEEECTTSSCEEEEEEEEEETTEE
T ss_pred eccCCCCC---------EEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-CCCC--cEEECCCCCEEEEEcccccccccC
Confidence 44578886 5555544 68999999999998888875 3334 499999999998876
Q ss_pred -CCCcEEEEeCCCCeEEEEeecCC-------CCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEE
Q 036605 93 -TNGMASEMKSEMGEVIREFKASE-------KPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQY 160 (340)
Q Consensus 93 -~dg~i~~wd~~~~~~~~~~~~~~-------~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~ 160 (340)
.++.|.+||..+++.+..+.... .....++++|||++++++. +.|.++|+.+++.+.++.... + .
T Consensus 106 ~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~ 182 (386)
T 3sjl_D 106 ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-Y 182 (386)
T ss_dssp EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-E
T ss_pred CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-c
Confidence 35789999999999988875432 2467899999999987743 349999999999888885321 1 2
Q ss_pred EEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCc--eeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 161 VSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGP--ALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 161 ~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
..+....+.+++.+. ||.+.+.++... +...... .+.....+..... .|..++|.+++ .+.+|.|+++|+...
T Consensus 183 ~~~P~g~~~~~~~~~-DG~~~~v~~~~~-g~v~~~~~~~~~~~~~~~~~~~--~~~~~dG~~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 183 HIFPTAPDTFFMHCR-DGSLAKVAFGTE-GTPEITHTEVFHPEDEFLINHP--AYSQKAGRLVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp EEEEEETTEEEEEET-TSCEEEEECCSS-SCCEEEECCCCSCTTSCBCSCC--EEETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred eeecCCCceeEEECC-CCCEEEEECCCC-CeEEEeecceeccccccccccc--eeEcCCCcEEE-EeCCCEEEEEECCCC
Confidence 334334455666556 888888887321 2211000 0000001111000 11135665444 677899999998754
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=6.6e-12 Score=108.90 Aligned_cols=180 Identities=14% Similarity=0.144 Sum_probs=97.8
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCC-Cee-EE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEK-PIS-SS 121 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~-~i~-~l 121 (340)
++++++.||.|+.||..+|+.++++.. +.+.+..+..++..+++++.||.|+.||..+|+.+..+..+.. .+. +.
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 699999999999999999999998874 4555555566777788778999999999999987766543211 010 11
Q ss_pred EEccCCCEEEE--ecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceee
Q 036605 122 AFLCEEKIFAL--ASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALS 199 (340)
Q Consensus 122 ~~~~~~~~l~~--~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~ 199 (340)
.+..++ .+++ .++.++.||..+|+.+..+..+. ...++|++..+++++. ++.|..||. .+++........
T Consensus 88 ~~~~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~-dg~v~a~d~--~tG~~~W~~~~~ 159 (369)
T 2hz6_A 88 CRSSDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRT-EYTITMYDT--KTRELRWNATYF 159 (369)
T ss_dssp CC------CCCCEEEEEEEEECCC--------------------------EEEEEE-EEEEECCCS--SSSSCCCEEEEE
T ss_pred eEecCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEec-CCEEEEEEC--CCCCEEEeEecc
Confidence 111233 3433 44559999999998877665443 2345667788888777 899999998 455543332211
Q ss_pred ecCCCeeeeeecCCCCCCC---CEEEEEeCCCcEEEEECCCCCccC
Q 036605 200 MRHSPVAIDCKNSPNGEDG---TVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~---~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
. . ... .. ..+. ..+++++.||.|+.||..+++.+-
T Consensus 160 ~-~----~~~--~~-~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 160 D-Y----AAS--LP-EDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp E-E----CCB--CC-CCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred c-c----cCc--cc-cCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 0 0 001 11 2221 457778999999999999887654
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.20 E-value=2.8e-08 Score=82.92 Aligned_cols=193 Identities=6% Similarity=0.053 Sum_probs=128.1
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEE-EecCCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKW-KSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
...+.++++.+++. ++++...++.|..||.. ++... .+.. ....+.++++.++++.+++...++.|..
T Consensus 61 ~~~~~~i~~~~~g~---------l~v~~~~~~~v~~~d~~-g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 129 (300)
T 2qc5_A 61 DAKVMCLIVSSLGD---------IWFTENGANKIGKLSKK-GGFTEYPLPQ-PDSGPYGITEGLNGDIWFTQLNGDRIGK 129 (300)
T ss_dssp TCCEEEEEECTTSC---------EEEEETTTTEEEEECTT-SCEEEEECSS-TTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred CCcceeEEECCCCC---------EEEEecCCCeEEEECCC-CCeEEecCCC-CCCCCccceECCCCCEEEEccCCCeEEE
Confidence 35788999999998 77777678899999987 65432 2222 3467899999999987777666789999
Q ss_pred EeCCCCeEEEE-eecCCCCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeE-EeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 100 MKSEMGEVIRE-FKASEKPISSSAFLCEEKIFALA--SSEVRILSLENGEEVL-KFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 100 wd~~~~~~~~~-~~~~~~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
||.. ++.... +......+..+++.++++++++. ++.|..||. +++... ....+...+..+++++++...++ ..
T Consensus 130 ~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~-~~ 206 (300)
T 2qc5_A 130 LTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFV-EI 206 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEE-ET
T ss_pred ECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEE-cc
Confidence 9987 655422 22234568899999999976665 345999998 554432 12234456889999999976555 44
Q ss_pred CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 176 GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
..+.|.+|+. .+.... .... ........+ .+ .++|..+++...++.|..|+.
T Consensus 207 ~~~~i~~~~~---~g~~~~-~~~~-~~~~~~~~i--~~-d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 207 MGNKIGRITT---TGEISE-YDIP-TPNARPHAI--TA-GKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TTTEEEEECT---TCCEEE-EECS-STTCCEEEE--EE-CSTTCEEEEETTTTEEEEECT
T ss_pred CCCEEEEEcC---CCcEEE-EECC-CCCCCceEE--EE-CCCCCEEEeccCCCeEEEECC
Confidence 3678999986 222111 1100 111122222 23 677776666666788999987
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.19 E-value=8e-09 Score=86.99 Aligned_cols=152 Identities=9% Similarity=-0.037 Sum_probs=106.8
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEM 100 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~w 100 (340)
........|+|+++ .+++++..++.|..|+. +++ ...+.. +...+.+++++++|+++++...++.|.+|
T Consensus 44 ~~~~egp~~~~~g~--------~l~~~d~~~~~i~~~~~-~g~-~~~~~~-~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 44 ATWSEGPAWWEAQR--------TLVWSDLVGRRVLGWRE-DGT-VDVLLD-ATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CSSEEEEEEEGGGT--------EEEEEETTTTEEEEEET-TSC-EEEEEE-SCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CcCccCCeEeCCCC--------EEEEEECCCCEEEEEeC-CCC-EEEEeC-CCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 34567899999985 16777888899999997 454 334443 55678999999999866554556789999
Q ss_pred eCCCCeEEEEeecC----CCCeeEEEEccCCCEEEE----ec---------------CcEEEEECCCCceeEEeecCCCC
Q 036605 101 KSEMGEVIREFKAS----EKPISSSAFLCEEKIFAL----AS---------------SEVRILSLENGEEVLKFSDDVGP 157 (340)
Q Consensus 101 d~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~----~~---------------~~i~i~d~~~~~~~~~~~~~~~~ 157 (340)
+.. ++........ ...+..++++|+|.++++ +. +.|+.||..+++.... . ....
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~-~-~~~~ 189 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM-A-DLDH 189 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE-E-EESS
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE-e-cCCC
Confidence 986 6543222111 134678999999998885 11 2388888776654332 2 3345
Q ss_pred eEEEEECCCCCEEEEEEcC-----CCeEEEEEcc
Q 036605 158 LQYVSASDGAKIIITAGYG-----EKHLQVWRCD 186 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~~-----d~~i~iwd~~ 186 (340)
...++|+|+++.|+.+... .+.|.+|++.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 6889999999988886662 2689999984
No 216
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.16 E-value=5.8e-08 Score=81.04 Aligned_cols=194 Identities=9% Similarity=0.079 Sum_probs=130.3
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEE-EecCCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKW-KSTGRHPGGLAGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
....+.++++.++++ ++++...++.|.+||.. ++... .+.. +...+.+++++++++.+++...++.|.
T Consensus 18 ~~~~p~~i~~d~~g~---------l~v~~~~~~~v~~~~~~-~~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~v~ 86 (300)
T 2qc5_A 18 PDSGPYGITSSEDGK---------VWFTQHKANKISSLDQS-GRIKEFEVPT-PDAKVMCLIVSSLGDIWFTENGANKIG 86 (300)
T ss_dssp TTCCEEEEEECTTSC---------EEEEETTTTEEEEECTT-SCEEEEECSS-TTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCCcceeeECCCCC---------EEEEcCCCCeEEEECCC-CceEEEECCC-CCCcceeEEECCCCCEEEEecCCCeEE
Confidence 456789999999999 77777778999999988 65443 2222 446789999999998777666678999
Q ss_pred EEeCCCCeEEEE-eecCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeE-EeecCCCCeEEEEECCCCCEEEEEE
Q 036605 99 EMKSEMGEVIRE-FKASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVL-KFSDDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 99 ~wd~~~~~~~~~-~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
.||.. ++.... .......+.++++.+++.++++.. +.|..||.. ++... .+......+..+++.++++..++ .
T Consensus 87 ~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~-~ 163 (300)
T 2qc5_A 87 KLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFT-E 163 (300)
T ss_dssp EECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEE-E
T ss_pred EECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEE-e
Confidence 99988 654322 222345688999999998887753 459999987 54432 22333467889999999985555 4
Q ss_pred cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 175 YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 175 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
..++.|..|+. .++... .... ........+ .+ .+++..+++....+.|.+|+.
T Consensus 164 ~~~~~i~~~~~---~g~~~~-~~~~-~~~~~~~~i--~~-d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 164 NQNNSIGRITN---TGKLEE-YPLP-TNAAAPVGI--TS-GNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp TTTTEEEEECT---TCCEEE-EECS-STTCCEEEE--EE-CTTSSEEEEETTTTEEEEECT
T ss_pred cCCCeEEEECC---CCcEEE-eeCC-CCCCCcceE--EE-CCCCCEEEEccCCCEEEEEcC
Confidence 43678888886 222111 1100 111122222 23 567777776666778999987
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.16 E-value=7.8e-10 Score=95.08 Aligned_cols=214 Identities=13% Similarity=0.008 Sum_probs=130.7
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEc----------CCCcEEEEEccCCeeEEEecC
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGT----------SNGDILAVDVLTGEMKWKSTG 70 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~----------~dg~i~i~d~~~~~~~~~~~~ 70 (340)
|+|+.+++++.++... ..+ .+.++||++ +++++. .++.|.+||+.+++.+.++.-
T Consensus 50 vID~~t~~v~~~i~vG----~~P--~i~~spDg~---------~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v 114 (368)
T 1mda_H 50 VSCAGCGVTLGHSLGA----FLS--LAVAGHSGS---------DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIEL 114 (368)
T ss_dssp EEETTTTEEEEEEEEC----TTC--EEEECTTSS---------CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCCCeEEEEEeCC----CCC--ceEECCCCC---------EEEEEcccccccccCCCCCEEEEEECCCCCEEEEEEC
Confidence 4688899999888722 234 799999997 677665 368899999999998888753
Q ss_pred CC-------CCCeEEEEEecCCCEEEEEeC--CCcEEE--EeCCCCeEEEEeecCCC-Ce------eEEEEccC------
Q 036605 71 RH-------PGGLAGLAFAKKGRSLHVVGT--NGMASE--MKSEMGEVIREFKASEK-PI------SSSAFLCE------ 126 (340)
Q Consensus 71 ~h-------~~~v~~v~~~~~~~~l~s~~~--dg~i~~--wd~~~~~~~~~~~~~~~-~i------~~l~~~~~------ 126 (340)
. ......++|+|||++|+++.. +..|.+ +|+.+ +..+..... .+ .-++++++
T Consensus 115 -~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 115 -PDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp -TTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred -CCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 2 124568999999999999874 457888 99866 222221000 00 00111122
Q ss_pred -------------------------------CCE-EEEecCcEEEEECCCCc--eeEEeec-------C---CCCeEEEE
Q 036605 127 -------------------------------EKI-FALASSEVRILSLENGE--EVLKFSD-------D---VGPLQYVS 162 (340)
Q Consensus 127 -------------------------------~~~-l~~~~~~i~i~d~~~~~--~~~~~~~-------~---~~~v~~~~ 162 (340)
+.. +++..+.+.+.|+.+.. .+..+.. + ......+.
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred ECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 221 11111346666664432 1111110 0 01112268
Q ss_pred ECCCCCEEEEEEc---C-----CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCE-EEEEe-CCCcEEE
Q 036605 163 ASDGAKIIITAGY---G-----EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTV-ILAVA-ESGVAYS 232 (340)
Q Consensus 163 ~s~~~~~l~s~~~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~s-~dg~i~v 232 (340)
|+|+++.++.+.. . ++.+.++|+ .+.+....+.+ +..+..+.+ ++|+.+ +++.. .++.|.+
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~--~t~~vv~~i~v--g~~p~gi~~-----s~Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTA--SVGQTSGPISN--GHDSDAIIA-----AQDGASDNYANSAGTEVLDI 341 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEES--SSCCEEECCEE--EEEECEEEE-----CCSSSCEEEEEETTTTEEEE
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEEC--CCCeEEEEEEC--CCCcceEEE-----CCCCCEEEEEccCCCCeEEE
Confidence 9999998887543 2 235669998 56555554443 333444555 788874 55555 5899999
Q ss_pred EECCCCCccC
Q 036605 233 WDLKTVSQDE 242 (340)
Q Consensus 233 wd~~~~~~~~ 242 (340)
+|+.+.+.+.
T Consensus 342 ID~~t~kvv~ 351 (368)
T 1mda_H 342 YDAASDQDQS 351 (368)
T ss_dssp EESSSCEEEE
T ss_pred EECCCCcEEE
Confidence 9999987665
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.16 E-value=1.5e-08 Score=86.15 Aligned_cols=150 Identities=14% Similarity=0.044 Sum_probs=99.4
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC--C-CCCCeEEEEEecCCCEEEEEeC----
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG--R-HPGGLAGLAFAKKGRSLHVVGT---- 93 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--~-h~~~v~~v~~~~~~~~l~s~~~---- 93 (340)
...+.+++|+|+++ ++++. .+| |.+||..+++....... . ....+++++++|+|+.+++...
T Consensus 89 ~~~v~~i~~~~dg~---------l~v~~-~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~ 157 (326)
T 2ghs_A 89 PFMGSALAKISDSK---------QLIAS-DDG-LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAE 157 (326)
T ss_dssp SSCEEEEEEEETTE---------EEEEE-TTE-EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCC
T ss_pred CCcceEEEEeCCCe---------EEEEE-CCC-EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCC
Confidence 35789999999998 55544 444 99999988875432221 0 1235889999999987665432
Q ss_pred --CCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec---CcEEEEECC--CC-ce-----eEEeecCCCCeEE
Q 036605 94 --NGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS---SEVRILSLE--NG-EE-----VLKFSDDVGPLQY 160 (340)
Q Consensus 94 --dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~--~~-~~-----~~~~~~~~~~v~~ 160 (340)
.+.|..++ +++... +.........++|+|+++.++.++ +.|.+||+. ++ .. +..+......+..
T Consensus 158 ~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~g 234 (326)
T 2ghs_A 158 TGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDG 234 (326)
T ss_dssp TTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEE
T ss_pred CCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCe
Confidence 25666666 555433 322334567899999998775543 349999986 55 31 2222223455678
Q ss_pred EEECCCCCEEEEEEcCCCeEEEEEc
Q 036605 161 VSASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 161 ~~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
++++++|.+.++... ++.|.+|+.
T Consensus 235 i~~d~~G~lwva~~~-~~~v~~~d~ 258 (326)
T 2ghs_A 235 SVCDAEGHIWNARWG-EGAVDRYDT 258 (326)
T ss_dssp EEECTTSCEEEEEET-TTEEEEECT
T ss_pred eEECCCCCEEEEEeC-CCEEEEECC
Confidence 999999976666444 688999986
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=3.7e-08 Score=84.38 Aligned_cols=201 Identities=5% Similarity=-0.054 Sum_probs=126.0
Q ss_pred CCeEEEEeeccccccccccCceEEEEEc--CCCcEEEEEccCCeeEEEecC------CCCCCeEEEEEecCCCEEEEEeC
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGT--SNGDILAVDVLTGEMKWKSTG------RHPGGLAGLAFAKKGRSLHVVGT 93 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~--~dg~i~i~d~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~~~ 93 (340)
.....++++|+|+ ++++.. .++.+.||.+.+++. ..+.. .|-..+.+++++++++++++-..
T Consensus 17 ~~p~~va~~~~g~---------~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGR---------LFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSC---------EEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred CCcceEEECCCCC---------EEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCC
Confidence 5788999999999 777753 234244554446653 33321 24568999999999865444322
Q ss_pred -----CCcEEEEeCCCCeEEEEeecC------CCCeeEEEEccCCCEEEEec------CcEEEEECCCCceeEEeecCC-
Q 036605 94 -----NGMASEMKSEMGEVIREFKAS------EKPISSSAFLCEEKIFALAS------SEVRILSLENGEEVLKFSDDV- 155 (340)
Q Consensus 94 -----dg~i~~wd~~~~~~~~~~~~~------~~~i~~l~~~~~~~~l~~~~------~~i~i~d~~~~~~~~~~~~~~- 155 (340)
++.|.+||+.+++.+..+... ...+..+++++++..++.++ ..|.+||+.+++..+.+..|.
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 578999999999877766532 23468999998655554432 339999998886655443321
Q ss_pred ----------------------------CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCC-C-----ccCCceeeec
Q 036605 156 ----------------------------GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSK-T-----VNKGPALSMR 201 (340)
Q Consensus 156 ----------------------------~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~-~-----~~~~~~~~~~ 201 (340)
..+..++|+|+++.|+.+......+..++.+.... . ....+.. .+
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g 245 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIER-YS 245 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEE-EE
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEe-cc
Confidence 23578999999998988776344555554321010 0 0011110 01
Q ss_pred C--CCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 202 H--SPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 202 ~--~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
+ .+.-+.+ +++|..+++...++.|.+||..++
T Consensus 246 ~~g~pdgia~-----d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 246 EKPICDGISI-----DKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp ECCSCSCEEE-----CTTCCEEEEEGGGTEEEEEETTTT
T ss_pred cCCCCceEEE-----CCCCCEEEEccCCCeEEEEECCCC
Confidence 1 1122333 678888899888999999998443
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.10 E-value=3.4e-08 Score=85.49 Aligned_cols=181 Identities=9% Similarity=-0.014 Sum_probs=115.7
Q ss_pred EEEEEcC--CC---cEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe----------CCCcEEEEeCCCCeEE
Q 036605 44 LLALGTS--NG---DILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG----------TNGMASEMKSEMGEVI 108 (340)
Q Consensus 44 ~l~~g~~--dg---~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~dg~i~~wd~~~~~~~ 108 (340)
++++... .+ +|.+||..+++.+..+.. ...+ .++++|||+.|+.+. .++.|.+||..+.+.+
T Consensus 34 ~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~ 110 (373)
T 2mad_H 34 RSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI 110 (373)
T ss_pred EEEEeCCcccCCccEEEEEECCCCeEEEEecC-CCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE
Confidence 5666543 33 889999999998887775 3333 999999999999986 3578999999998887
Q ss_pred EEeecC-------CCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEE-eecCCCCeEEEEECCCCCEEEEEEcC
Q 036605 109 REFKAS-------EKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLK-FSDDVGPLQYVSASDGAKIIITAGYG 176 (340)
Q Consensus 109 ~~~~~~-------~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~~ 176 (340)
..+... ......++++|||++|+++. ..|.++| .+++.+.. +.. .. ++.+.|++...+.....
T Consensus 111 ~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~ 185 (373)
T 2mad_H 111 ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCA 185 (373)
T ss_pred EEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcC
Confidence 776532 12346899999999998743 3399999 99988776 532 12 24455665444443445
Q ss_pred CCeEEEEEccCCCCCccCCce---eeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 177 EKHLQVWRCDISSKTVNKGPA---LSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 177 d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
|+.+.+++. .++...... ......+..... .+ .+++..++..+..+.+++.|+...
T Consensus 186 dg~~~~vd~---~g~~~~~~~~~~~~~~~~p~~~~~--~~-~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 186 QGGLAKTDH---AGGAAGAGLVGAMLTAAQNLLTQP--AQ-ANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred CCCEEEEEC---CCcEEEEEeccccccCCcceeecc--ee-EecCCEEEEEcCCceEEEEeccCC
Confidence 899999997 221111000 001111111111 22 334444444557888999998653
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=1.6e-08 Score=95.00 Aligned_cols=213 Identities=8% Similarity=0.019 Sum_probs=132.0
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCc-------------EEEEEccCCee--E
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGD-------------ILAVDVLTGEM--K 65 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~-------------i~i~d~~~~~~--~ 65 (340)
|||+.+|+.+.... .......++|+ |++ .|+.++.+.. |++|++.++.. .
T Consensus 159 v~dl~tg~~~~~~~-----~~~k~~~~~Ws-Dg~---------~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 223 (693)
T 3iuj_A 159 LMDVESKQPLETPL-----KDVKFSGISWL-GNE---------GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR 223 (693)
T ss_dssp EEETTTCSEEEEEE-----EEEESCCCEEE-TTT---------EEEEEESSCCC-------CCCCEEEEEETTSCGGGCE
T ss_pred EEECCCCCCCcccc-----CCceeccEEEe-CCC---------EEEEEEecCcccccccccCCCcEEEEEECCCCcccce
Confidence 47888887654321 11113568899 998 7888777643 99999877642 2
Q ss_pred EEecC-C-CCCCeEEEEEecCCCEEEEEeC----CCcEEEEeCCCCe-EEEEeecCCCCeeEEEEccCCCEEE-Eec---
Q 036605 66 WKSTG-R-HPGGLAGLAFAKKGRSLHVVGT----NGMASEMKSEMGE-VIREFKASEKPISSSAFLCEEKIFA-LAS--- 134 (340)
Q Consensus 66 ~~~~~-~-h~~~v~~v~~~~~~~~l~s~~~----dg~i~~wd~~~~~-~~~~~~~~~~~i~~l~~~~~~~~l~-~~~--- 134 (340)
..+.. . |...+..+.|+|||++|+.... ...|.++|+.++. ....+..+....... +++++..|+ ..+
T Consensus 224 ~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~ 302 (693)
T 3iuj_A 224 LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDA 302 (693)
T ss_dssp EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTC
T ss_pred EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCC
Confidence 23332 1 3445788999999998765432 2589999997763 334455555555444 666666554 332
Q ss_pred --CcEEEEECCCCce--eEEeecCCCCeEEEEECCCCCEEEEEEcCCC--eEEEEEccCCCCCccCCceeeecCCCeeee
Q 036605 135 --SEVRILSLENGEE--VLKFSDDVGPLQYVSASDGAKIIITAGYGEK--HLQVWRCDISSKTVNKGPALSMRHSPVAID 208 (340)
Q Consensus 135 --~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (340)
..|..+|+.++.. ...+..|...+. .|++++.+|+.....++ .|.+|++ ..+. ... +.+.....+..
T Consensus 303 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~--~g~~-~~~--l~~p~~~~~~~ 375 (693)
T 3iuj_A 303 PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDY--EGKR-VRE--VALPGLGSVSG 375 (693)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECT--TSCE-EEE--ECCSSSSEEEE
T ss_pred CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEEC--CCCe-eEE--eecCCCceEEe
Confidence 2399999987654 355666666655 88999999888776455 5777776 3322 111 11222223333
Q ss_pred eecCCCCCCCCEEEEEeCC----CcEEEEECCCCC
Q 036605 209 CKNSPNGEDGTVILAVAES----GVAYSWDLKTVS 239 (340)
Q Consensus 209 ~~~~~~~~~~~~l~~~s~d----g~i~vwd~~~~~ 239 (340)
+ .+ ++++..++....+ +.++.||+.+++
T Consensus 376 ~--~~-~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 376 F--NG-KHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp C--CC-CTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred e--ec-CCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 3 34 5666666555444 789999987653
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=3.3e-08 Score=80.54 Aligned_cols=208 Identities=11% Similarity=0.001 Sum_probs=134.5
Q ss_pred CceeeeeeCCCCCCC-CCeEEEEeeccccccccccCceEEEEEcC--CCcEEEEEccCCeeEEEecCCCCCCeEEEEEec
Q 036605 7 GSLLAEWKQPDGEPV-VSYSCLACGFVGKKRRKERGTLLLALGTS--NGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAK 83 (340)
Q Consensus 7 g~~~~~~~~~~~~~~-~~v~~l~~sp~~~~~~~~~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~ 83 (340)
.+++.++. +.. .....++|+|++. ++++.+. ++.|.++|+.+++.+..+.-........+++.
T Consensus 9 ~~vv~~~p----~~~~~f~~Gl~~~~dg~---------Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~- 74 (266)
T 2iwa_A 9 VEVLNEFP----HDPYAFTQGLVYAENDT---------LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL- 74 (266)
T ss_dssp EEEEEEEE----CCTTCCEEEEEECSTTE---------EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-
T ss_pred ceEEEEEE----CCCCCCcccEEEeCCCe---------EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-
Confidence 34556665 222 3457899999876 5555443 68999999999998887653121223355554
Q ss_pred CCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC--cEEEEECCCCceeEEeecC--C---
Q 036605 84 KGRSLHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS--EVRILSLENGEEVLKFSDD--V--- 155 (340)
Q Consensus 84 ~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--~i~i~d~~~~~~~~~~~~~--~--- 155 (340)
+..|+.+. .++.+.++|..+.+.+..+... . -....+++||+.++++++ .|.++|..+.+.+..+.-. .
T Consensus 75 -g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~-~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 75 -NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M-KDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp -TTEEEEEETTCSEEEEEETTTTEEEEEEECC-S-SSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred -CCEEEEEEecCCEEEEEECCCCcEEEEEECC-C-CCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 56676665 4689999999999999888644 1 123446678877766444 4999999998888776421 1
Q ss_pred CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceee-ec-------CC--CeeeeeecCCCCCCCC-EEEEE
Q 036605 156 GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALS-MR-------HS--PVAIDCKNSPNGEDGT-VILAV 224 (340)
Q Consensus 156 ~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~-------~~--~~~~~~~~~~~~~~~~-~l~~~ 224 (340)
..+..+.|. ++ .+++....++.|.+.|. .+++....+.+. +. .+ .....+ .+ .+++. .++++
T Consensus 152 ~~~nele~~-dg-~lyvn~~~~~~V~vID~--~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGI--a~-~~~~~~lfVTg 224 (266)
T 2iwa_A 152 IRLNELEYI-NG-EVWANIWQTDCIARISA--KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGI--AW-DQENKRIFVTG 224 (266)
T ss_dssp CCEEEEEEE-TT-EEEEEETTSSEEEEEET--TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEE--EE-ETTTTEEEEEE
T ss_pred ccceeEEEE-CC-EEEEecCCCCeEEEEEC--CCCcEEEEEECCCcccccccccccccCceEEE--EE-cCCCCEEEEEC
Confidence 246678888 66 56665655889999998 566554444332 00 01 111222 33 56654 55666
Q ss_pred eCCCcEEEEECCCC
Q 036605 225 AESGVAYSWDLKTV 238 (340)
Q Consensus 225 s~dg~i~vwd~~~~ 238 (340)
...+.+++.++...
T Consensus 225 k~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 225 KLWPKLFEIKLHLV 238 (266)
T ss_dssp TTCSEEEEEEEEEC
T ss_pred CCCCeEEEEEEecc
Confidence 67888999887653
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.08 E-value=1.1e-08 Score=87.90 Aligned_cols=220 Identities=13% Similarity=0.061 Sum_probs=140.4
Q ss_pred CccCCCCceeeeeeCCCCC---CCCCeEEEEeeccccccccccCceEEEEEcC--CCcEEEEEccCCeeEEEecCCCCCC
Q 036605 1 IWSTNDGSLLAEWKQPDGE---PVVSYSCLACGFVGKKRRKERGTLLLALGTS--NGDILAVDVLTGEMKWKSTGRHPGG 75 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~---~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~~h~~~ 75 (340)
+||+.+++...++....+. .......++|+|||+ +|+++.. ++.|.++|+.+++.+.++.- .+
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk---------~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g- 180 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK---------TLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PD- 180 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS---------EEEEEECSSSCEEEEEETTTTEEEEEEEC--CS-
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC---------EEEEEEcCCCCeEEEEECCCCcEEEEEEC--CC-
Confidence 5788888888777522000 123456799999998 7777653 68999999999998888864 22
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCC-CeEEEEeecC----CCCee-EEEE-ccCCCEEE-EecCcEEEEECCCCc-
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEM-GEVIREFKAS----EKPIS-SSAF-LCEEKIFA-LASSEVRILSLENGE- 146 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~----~~~i~-~l~~-~~~~~~l~-~~~~~i~i~d~~~~~- 146 (340)
. ...+....+.+++.+.||.+.+.++.+ ++........ ..++. ...| .++|++++ +.++.+++.|+.++.
T Consensus 181 ~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~ 259 (386)
T 3sjl_D 181 C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA 259 (386)
T ss_dssp E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSC
T ss_pred c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcc
Confidence 1 222333455777888899999999876 5543221111 12222 2355 47887654 455669999997664
Q ss_pred -eeEEee----------cCCCCeEEEEECCCCCEEEEEEcC---------CCeEEEEEccCCCCCccCCceeeecCCCee
Q 036605 147 -EVLKFS----------DDVGPLQYVSASDGAKIIITAGYG---------EKHLQVWRCDISSKTVNKGPALSMRHSPVA 206 (340)
Q Consensus 147 -~~~~~~----------~~~~~v~~~~~s~~~~~l~s~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 206 (340)
.+..+. ........+++++++..++..... .+.|.++|+ .+++....+. ++..+..
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~--~t~kv~~~i~--vg~~~~~ 335 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA--KTGERLAKFE--MGHEIDS 335 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET--TTCCEEEEEE--EEEEECE
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC--CCCeEEEEEE--CCCCcce
Confidence 222222 012334457889999888886431 256888887 5665544443 3444445
Q ss_pred eeeecCCCCCCCC-EEEEEe-CCCcEEEEECCCCCccC
Q 036605 207 IDCKNSPNGEDGT-VILAVA-ESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 207 ~~~~~~~~~~~~~-~l~~~s-~dg~i~vwd~~~~~~~~ 242 (340)
+.+ ++|+. +|++.. .++.|.++|..+++.+.
T Consensus 336 lav-----s~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 336 INV-----SQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEE-----CSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEE-----CCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 555 78886 666654 48999999999887665
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.06 E-value=1.4e-08 Score=88.81 Aligned_cols=173 Identities=9% Similarity=-0.017 Sum_probs=115.5
Q ss_pred CcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeecC-------
Q 036605 52 GDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG----------TNGMASEMKSEMGEVIREFKAS------- 114 (340)
Q Consensus 52 g~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~dg~i~~wd~~~~~~~~~~~~~------- 114 (340)
+.|.++|..+++.+.++.- ...+ .++++||++.|+.+. .++.|.++|..+++.+..+...
T Consensus 99 ~~VsVID~~t~~vv~~I~v-G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDG-GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEE-CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEEC-CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 7999999999999988875 3334 899999999999886 3678999999999988877542
Q ss_pred CCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCC-CEEEEEEcCCCeEEEEEccCCC
Q 036605 115 EKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGA-KIIITAGYGEKHLQVWRCDISS 189 (340)
Q Consensus 115 ~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~~d~~i~iwd~~~~~ 189 (340)
......++++|||++++++. +.|.++|+.+++.+..+.... . ....|++ ..+++.+. ||.+.+.++ ..
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~-dG~~~~V~~--~~ 248 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCR-DGSLARVDF--AD 248 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEET-TSSEEEEEC--CT
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcC-CCCEEEEEC--CC
Confidence 13457899999999998743 349999999999888775421 1 2233333 33344333 777777776 22
Q ss_pred CCccCC--ceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 190 KTVNKG--PALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 190 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
++.... ..+.....+..... .+ .+++..++..+..|.|++.|...
T Consensus 249 ~~v~~~~~~~~~v~~~p~~~~~--~~-~~dg~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 249 GETKVTNTEVFHTEDELLINHP--AF-SLRSGRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp TCCEEEECCCCSCTTSCBCSCC--EE-CTTTCEEEEEBTTSEEEEEEECS
T ss_pred CcEEEEeeeeeccCCCceeeEe--ee-cCCCCEEEEEeCCCcEEEEeccC
Confidence 221100 01111111111111 22 57777777778889999999864
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.06 E-value=4.8e-08 Score=87.67 Aligned_cols=208 Identities=11% Similarity=0.021 Sum_probs=136.4
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEe-e-ccccccccccCceEEEEEc------------------CCCcEEEEEccC
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLAC-G-FVGKKRRKERGTLLLALGT------------------SNGDILAVDVLT 61 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~-s-p~~~~~~~~~~~~~l~~g~------------------~dg~i~i~d~~~ 61 (340)
.|+.+.++...+..+ .......+++ + |+++ ++++++ .++.+.++|.++
T Consensus 117 Idl~t~~~~~ii~ip---~g~~phg~~~~~~p~~~---------~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t 184 (595)
T 1fwx_A 117 VRCDVMKCDAILEIP---NAKGIHGLRPQKWPRSN---------YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK 184 (595)
T ss_dssp EETTTTEEEEEEECS---SCCSEEEEEECCSSBCS---------EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT
T ss_pred EECCCceEeeEEeCC---CCCCCcceeeeecCCCc---------EEEEecccccccCCCCcccccccccCceEEEEECCC
Confidence 356667766644422 2345778887 5 8988 777773 346899999999
Q ss_pred CeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCC--------------------------------------cEEEEeCC
Q 036605 62 GEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG--------------------------------------MASEMKSE 103 (340)
Q Consensus 62 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg--------------------------------------~i~~wd~~ 103 (340)
.+..+.+.- .+.-..++++|+|+++++.+.+. .|.+.|..
T Consensus 185 ~~v~~qI~V--gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~ 262 (595)
T 1fwx_A 185 WEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGR 262 (595)
T ss_dssp TEEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECS
T ss_pred CeEEEEEEe--CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCc
Confidence 998888763 12456778999999999988553 36777777
Q ss_pred C--CeE-EEEeecCCCCeeEEEEccCCCEEEEecC---cEEEEECCCCc------------eeEEeecCCCCeEEEEECC
Q 036605 104 M--GEV-IREFKASEKPISSSAFLCEEKIFALASS---EVRILSLENGE------------EVLKFSDDVGPLQYVSASD 165 (340)
Q Consensus 104 ~--~~~-~~~~~~~~~~i~~l~~~~~~~~l~~~~~---~i~i~d~~~~~------------~~~~~~~~~~~v~~~~~s~ 165 (340)
+ ++. +..+... ....++.++|||+++++++. .|.++|+.+.+ ....+. -......++|++
T Consensus 263 ~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~ 340 (595)
T 1fwx_A 263 KEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDG 340 (595)
T ss_dssp GGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECT
T ss_pred ccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECC
Confidence 6 444 3444432 34578999999999988544 39999998653 223332 224578999999
Q ss_pred CCCEEEEEEcCCCeEEEEEccCCC----CCc--cCCceeeecCCCeeeeeec-CCCCCCCCEEEEEeC
Q 036605 166 GAKIIITAGYGEKHLQVWRCDISS----KTV--NKGPALSMRHSPVAIDCKN-SPNGEDGTVILAVAE 226 (340)
Q Consensus 166 ~~~~l~s~~~~d~~i~iwd~~~~~----~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~s~ 226 (340)
+| +++++..-|+.|.+|+++... ++. .....+.....+....... ...++||++|++...
T Consensus 341 dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 341 RG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp TS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 99 888878889999999995310 111 1111222333322222211 112799999998865
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.01 E-value=7.7e-07 Score=73.18 Aligned_cols=199 Identities=11% Similarity=0.015 Sum_probs=123.8
Q ss_pred CeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-CCcEEEE
Q 036605 23 SYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-NGMASEM 100 (340)
Q Consensus 23 ~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~w 100 (340)
....++|++++ . ++++-..++.|..++...+.....+.. ......++++++++..|+.+.. .+.|.++
T Consensus 37 ~~~gi~~d~~~~~---------ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 37 VIIGLAFDCVDKV---------VYWTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEEEETTTTE---------EEEEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEecCCCE---------EEEEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEE
Confidence 45789999865 5 566666788999999876654333332 3357899999998777776654 5789999
Q ss_pred eCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec-----CcEEEEECCCCceeEEe-ecCCCCeEEEEECCCCCEEEEEE
Q 036605 101 KSEMGEVIREFKASEKPISSSAFLCEEKIFALAS-----SEVRILSLENGEEVLKF-SDDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 101 d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-----~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
++..................++++|++..|+.++ +.|..+++... ....+ .........+++++++.+|+.+.
T Consensus 107 ~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 107 KMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 9865432222222224578999999765554422 34888887543 22333 22335678999999988888877
Q ss_pred cCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 175 YGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 175 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
...+.|.+++++ .... ... ......+ ..+ .. . ++..+++....+.|..+|..+++.+.
T Consensus 186 ~~~~~I~~~~~~--g~~~-~~~-~~~~~~P--~gi--~~-d-~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 186 AGTHRAECLNPA--QPGR-RKV-LEGLQYP--FAV--TS-Y-GKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp TTTTEEEEEETT--EEEE-EEE-EECCCSE--EEE--EE-E-TTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCCEEEEEecC--CCce-EEE-ecCCCCc--eEE--EE-e-CCEEEEEECCCCeEEEEeCCCCCceE
Confidence 768899999973 2211 111 1111112 222 11 2 33344444456789999988765544
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.99 E-value=3.4e-08 Score=84.59 Aligned_cols=157 Identities=10% Similarity=0.002 Sum_probs=106.7
Q ss_pred CCCCCeEEEEeeccccccccccCceEEEEEcC-----CCcEEEEEccCCeeEEEecC-----CCCCCeEEEEEecCCCEE
Q 036605 19 EPVVSYSCLACGFVGKKRRKERGTLLLALGTS-----NGDILAVDVLTGEMKWKSTG-----RHPGGLAGLAFAKKGRSL 88 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~-----dg~i~i~d~~~~~~~~~~~~-----~h~~~v~~v~~~~~~~~l 88 (340)
.+-..+..++++++++ ++++... ++.|.+||+.+++.+..+.. .+...+..+++++++..+
T Consensus 64 ~~~~~p~gv~~d~~g~---------L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~ 134 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGI---------VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFV 134 (343)
T ss_dssp CCCSCEEEEEECSSSE---------EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEE
T ss_pred cceeEeeEEEEcCCCc---------EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEE
Confidence 3456889999999998 6666544 57899999999986666542 123457899999876666
Q ss_pred EEEe----CCCcEEEEeCCCCeEEEEeecCC-----------------------------CCeeEEEEccCCCEEEEecC
Q 036605 89 HVVG----TNGMASEMKSEMGEVIREFKASE-----------------------------KPISSSAFLCEEKIFALASS 135 (340)
Q Consensus 89 ~s~~----~dg~i~~wd~~~~~~~~~~~~~~-----------------------------~~i~~l~~~~~~~~l~~~~~ 135 (340)
+.+. .++.|.+||+.+++....+..|. ..+..|+++|+++.|+.++.
T Consensus 135 yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~ 214 (343)
T 2qe8_A 135 YISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM 214 (343)
T ss_dssp EEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES
T ss_pred EEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC
Confidence 5554 46899999999887665543210 23578999999988876433
Q ss_pred ---cEEEEECC---CCc-----eeE--EeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEc
Q 036605 136 ---EVRILSLE---NGE-----EVL--KFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 136 ---~i~i~d~~---~~~-----~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
.++.++.. .+. ... ...++......++++++|..+++ ...++.|.+||.
T Consensus 215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va-~~~~~~V~~~d~ 276 (343)
T 2qe8_A 215 HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG-DLAHSAIGVITS 276 (343)
T ss_dssp SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE-EGGGTEEEEEET
T ss_pred CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE-ccCCCeEEEEEC
Confidence 35555532 111 000 11233445677999999976666 444899999996
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.98 E-value=1.3e-07 Score=88.64 Aligned_cols=183 Identities=13% Similarity=0.112 Sum_probs=117.6
Q ss_pred CCcEEEEEccCCeeEEEecCC-CC-----------------------------CCeEEEEEecCCCEEEEEeCCCc----
Q 036605 51 NGDILAVDVLTGEMKWKSTGR-HP-----------------------------GGLAGLAFAKKGRSLHVVGTNGM---- 96 (340)
Q Consensus 51 dg~i~i~d~~~~~~~~~~~~~-h~-----------------------------~~v~~v~~~~~~~~l~s~~~dg~---- 96 (340)
+|.|+.||..+|+.++++... +. .....++++|++..++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999999887521 00 01125788998899999887763
Q ss_pred ---------------EEEEeCCCCeEEEEeecCCC---------CeeEEEEccCCC---EEEEecC--cEEEEECCCCce
Q 036605 97 ---------------ASEMKSEMGEVIREFKASEK---------PISSSAFLCEEK---IFALASS--EVRILSLENGEE 147 (340)
Q Consensus 97 ---------------i~~wd~~~~~~~~~~~~~~~---------~i~~l~~~~~~~---~l~~~~~--~i~i~d~~~~~~ 147 (340)
|..||..+|+.+..+..... +.....+..+|+ .++.++. .++++|..+|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999999888764211 111222223554 5666554 499999999988
Q ss_pred eEEeecCC-C--------------------------------------CeEEEEECCCCCEEEEEEcC------------
Q 036605 148 VLKFSDDV-G--------------------------------------PLQYVSASDGAKIIITAGYG------------ 176 (340)
Q Consensus 148 ~~~~~~~~-~--------------------------------------~v~~~~~s~~~~~l~s~~~~------------ 176 (340)
+....... . .-..++|+|+...+++....
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 74332111 0 01236788887777765321
Q ss_pred --------------------------------CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEE
Q 036605 177 --------------------------------EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAV 224 (340)
Q Consensus 177 --------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (340)
++.|..||+ .+++..-... ...+...-.+ ...+.+++.+
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~--~tG~~~W~~~--~~~~~~~g~~-----~tagglvf~g 492 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP--VKQQAAWEVP--YVTIFNGGTL-----STAGNLVFEG 492 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET--TTTEEEEEEE--ESSSCCCCEE-----EETTTEEEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEEC--CCCCeEeEcc--CCCCccCccc-----eECCCEEEEE
Confidence 266888887 4554432222 1111111111 3456788899
Q ss_pred eCCCcEEEEECCCCCccC
Q 036605 225 AESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 225 s~dg~i~vwd~~~~~~~~ 242 (340)
+.||.++.||.++++.+.
T Consensus 493 t~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 493 SADGRVIAYAADTGEKLW 510 (689)
T ss_dssp CTTSEEEEEETTTCCEEE
T ss_pred CCCCcEEEEECCCCccce
Confidence 999999999999988875
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.97 E-value=1.4e-07 Score=88.17 Aligned_cols=192 Identities=15% Similarity=0.140 Sum_probs=124.8
Q ss_pred EEEEEcC------CCcEEEEEccCCeeEEEecCCCCC-------------------------------CeEEEEEecCCC
Q 036605 44 LLALGTS------NGDILAVDVLTGEMKWKSTGRHPG-------------------------------GLAGLAFAKKGR 86 (340)
Q Consensus 44 ~l~~g~~------dg~i~i~d~~~~~~~~~~~~~h~~-------------------------------~v~~v~~~~~~~ 86 (340)
.+++++. +|.|+.||..+|+.++++...... ....++++|++.
T Consensus 176 ~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~ 255 (677)
T 1kb0_A 176 KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN 255 (677)
T ss_dssp EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT
T ss_pred EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC
Confidence 3555553 689999999999999888641111 113578899999
Q ss_pred EEEEEeCCC-------------------cEEEEeCCCCeEEEEeecCCC---------CeeEEEEccCC---CEEEEecC
Q 036605 87 SLHVVGTNG-------------------MASEMKSEMGEVIREFKASEK---------PISSSAFLCEE---KIFALASS 135 (340)
Q Consensus 87 ~l~s~~~dg-------------------~i~~wd~~~~~~~~~~~~~~~---------~i~~l~~~~~~---~~l~~~~~ 135 (340)
.++.+..++ .|..+|..+|+.+..+..... ....+....+| ..++.++.
T Consensus 256 ~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~ 335 (677)
T 1kb0_A 256 TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPK 335 (677)
T ss_dssp EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCT
T ss_pred EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECC
Confidence 999887664 599999999999888664221 12223333467 55666554
Q ss_pred c--EEEEECCCCceeEEeecCCCC-----------e------------------------EEEEECCCCCEEEEEEcC--
Q 036605 136 E--VRILSLENGEEVLKFSDDVGP-----------L------------------------QYVSASDGAKIIITAGYG-- 176 (340)
Q Consensus 136 ~--i~i~d~~~~~~~~~~~~~~~~-----------v------------------------~~~~~s~~~~~l~s~~~~-- 176 (340)
+ ++++|..+|+.+..+...... + ..++|+|++..+++....
T Consensus 336 ~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~ 415 (677)
T 1kb0_A 336 NGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVP 415 (677)
T ss_dssp TSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECC
T ss_pred CCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcc
Confidence 4 999999999987655422100 0 146788888777775430
Q ss_pred ----------------------------------------CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCC
Q 036605 177 ----------------------------------------EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGE 216 (340)
Q Consensus 177 ----------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (340)
.+.|..||+ .+++..-... ...+.....+ ..
T Consensus 416 ~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~--~tG~~~W~~~--~~~~~~~g~~-----~~ 486 (677)
T 1kb0_A 416 VNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDP--VAQKAAWSVE--HVSPWNGGTL-----TT 486 (677)
T ss_dssp CEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEET--TTTEEEEEEE--ESSSCCCCEE-----EE
T ss_pred eeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeC--CCCcEEeecC--CCCCCcCcce-----Ee
Confidence 267888887 4554432222 1211111111 34
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCccCCC
Q 036605 217 DGTVILAVAESGVAYSWDLKTVSQDEKT 244 (340)
Q Consensus 217 ~~~~l~~~s~dg~i~vwd~~~~~~~~~~ 244 (340)
.+..++.++.||.+++||..+++.+..+
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCceeeee
Confidence 5667888999999999999998877633
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.97 E-value=7e-08 Score=81.18 Aligned_cols=190 Identities=12% Similarity=0.074 Sum_probs=118.4
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEec---CCCCCCeEEEEEecCCCEEEE----Ee
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKST---GRHPGGLAGLAFAKKGRSLHV----VG 92 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s----~~ 92 (340)
+...+..++|+++|+ ++++...++.|.+|+.. ++...... +.....+++++++++|+.+++ +.
T Consensus 84 ~~~~~~gl~~d~dG~---------l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~ 153 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQR---------LVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGL 153 (305)
T ss_dssp SCSCEEEEEECTTSC---------EEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGG
T ss_pred CCCccceeeECCCCC---------EEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCc
Confidence 345688999999999 66666666889999976 55332221 111235678999999987775 32
Q ss_pred C-------------CCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--------CcEEEEECCCCcee--E
Q 036605 93 T-------------NGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS--------SEVRILSLENGEEV--L 149 (340)
Q Consensus 93 ~-------------dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--------~~i~i~d~~~~~~~--~ 149 (340)
. .+.|..||..+++..... .......++|+|+++.|+.++ +.|++|++..+... .
T Consensus 154 ~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~ 231 (305)
T 3dr2_A 154 RKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRR 231 (305)
T ss_dssp SCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEE
T ss_pred cccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCe
Confidence 1 256888888777644333 334567899999999776532 35999998765311 1
Q ss_pred Ee-ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCC
Q 036605 150 KF-SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESG 228 (340)
Q Consensus 150 ~~-~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg 228 (340)
.+ .........++++++|+..++ .. + .|.+|+. .++....+. ... ....+ +| .+++..|+.++.++
T Consensus 232 ~~~~~~~~~pdgi~~d~~G~lwv~-~~-~-gv~~~~~---~g~~~~~~~--~~~--~~~~~--~f-~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 232 HFASVPDGLPDGFCVDRGGWLWSS-SG-T-GVCVFDS---DGQLLGHIP--TPG--TASNC--TF-DQAQQRLFITGGPC 298 (305)
T ss_dssp EEECCSSSCCCSEEECTTSCEEEC-CS-S-EEEEECT---TSCEEEEEE--CSS--CCCEE--EE-CTTSCEEEEEETTE
T ss_pred EEEECCCCCCCeEEECCCCCEEEe-cC-C-cEEEECC---CCCEEEEEE--CCC--ceeEE--EE-eCCCCEEEEEcCCe
Confidence 22 112344567899999985444 33 4 4888885 333332222 122 22233 44 57888888887765
Q ss_pred cEEEEEC
Q 036605 229 VAYSWDL 235 (340)
Q Consensus 229 ~i~vwd~ 235 (340)
++.+++
T Consensus 299 -l~~~~~ 304 (305)
T 3dr2_A 299 -LWMLPL 304 (305)
T ss_dssp -EEEEEC
T ss_pred -EEEEEC
Confidence 555443
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=1.5e-07 Score=76.60 Aligned_cols=167 Identities=13% Similarity=0.034 Sum_probs=118.9
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+|+.+|+++..+... . ......+++. + + +.++.-.++.+.++|..+.+.+.++... ... ...
T Consensus 49 iD~~tg~v~~~i~l~--~-~~fgeGi~~~--g~~---------lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~--g~g 111 (266)
T 2iwa_A 49 VALQTGKVENIHKMD--D-SYFGEGLTLL--NEK---------LYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD--GWG 111 (266)
T ss_dssp EETTTCCEEEEEECC--T-TCCEEEEEEE--TTE---------EEEEETTCSEEEEEETTTTEEEEEEECC-SSS--CCE
T ss_pred EECCCCCEEEEEecC--C-CcceEEEEEe--CCE---------EEEEEecCCEEEEEECCCCcEEEEEECC-CCC--eEE
Confidence 577788888776532 1 1122234444 4 4 5666667899999999999988888642 112 233
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC-----CCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeec
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE-----KPISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSD 153 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~ 153 (340)
+++||+.|+.+..++.|.++|..+.+.+..+.... ..+..+.+. ++...+.. +++|.+.|..+++.+..+..
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 55688888888778999999999998887765322 135677887 67554443 44599999999998877743
Q ss_pred C-------------CCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 154 D-------------VGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 154 ~-------------~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
. ......++|+|+++.++.++...+.+.+.++.
T Consensus 191 ~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 191 PNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp HHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 1 13558999999998888888778999999984
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.94 E-value=3.6e-07 Score=79.34 Aligned_cols=168 Identities=11% Similarity=0.007 Sum_probs=113.4
Q ss_pred CcEEEEEccCCeeEEEecCC-CC-CCeEEEEEecCCCEEEEEe-------------------CCCcEEEEeCCCCeEEEE
Q 036605 52 GDILAVDVLTGEMKWKSTGR-HP-GGLAGLAFAKKGRSLHVVG-------------------TNGMASEMKSEMGEVIRE 110 (340)
Q Consensus 52 g~i~i~d~~~~~~~~~~~~~-h~-~~v~~v~~~~~~~~l~s~~-------------------~dg~i~~wd~~~~~~~~~ 110 (340)
|.|.++|.++++.+.++... .. ..-+.+.|+|+++.+++.. .+..|.+||+.+++.+.+
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 78999999999999888631 22 2345688999999998874 367999999999988888
Q ss_pred eecCC--CCeeEEEE--ccCCCEEEEecC--------cEEEEECCCCcee--EEe--ecC----------------CCCe
Q 036605 111 FKASE--KPISSSAF--LCEEKIFALASS--------EVRILSLENGEEV--LKF--SDD----------------VGPL 158 (340)
Q Consensus 111 ~~~~~--~~i~~l~~--~~~~~~l~~~~~--------~i~i~d~~~~~~~--~~~--~~~----------------~~~v 158 (340)
+.... .....+.| +|++++++++.. +|.+|....++.. ..+ ... ....
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 77532 23445555 999998876443 3666554443211 111 100 2346
Q ss_pred EEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeec-----------C----CCeeeeeecCCCCCCCCEEEE
Q 036605 159 QYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMR-----------H----SPVAIDCKNSPNGEDGTVILA 223 (340)
Q Consensus 159 ~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~~~~l~~ 223 (340)
..+.+++||++|+++....+.|.+||+. ........-.+..+ . .+..+.+ ++||++|++
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~l-----SpDGk~LyV 397 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDIS-NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEI-----SRDGRRVYV 397 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECS-STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEE-----CTTSSEEEE
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEec-CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEE-----cCCCCEEEE
Confidence 7899999999999999989999999983 11111111111222 1 2455556 899999998
Q ss_pred Ee
Q 036605 224 VA 225 (340)
Q Consensus 224 ~s 225 (340)
+.
T Consensus 398 aN 399 (462)
T 2ece_A 398 TN 399 (462)
T ss_dssp EC
T ss_pred Ec
Confidence 88
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.91 E-value=4.5e-07 Score=73.04 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=107.5
Q ss_pred eEEEEeeccccccccccCceEEEEEcCCC--cEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEEE
Q 036605 24 YSCLACGFVGKKRRKERGTLLLALGTSNG--DILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASEM 100 (340)
Q Consensus 24 v~~l~~sp~~~~~~~~~~~~~l~~g~~dg--~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~w 100 (340)
...|.|+ ++. ++.+.+.+| .|+++|+++++.+.++.- ..........+++..|+... .++.+.+|
T Consensus 45 tqGL~~~-~~~---------LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 45 TEGFFYR-NGY---------FYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEEEE-TTE---------EEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred cceEEEE-CCE---------EEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 4678888 667 666766665 999999999998888764 23444433334466777765 47899999
Q ss_pred eCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeecC--C---CCeEEEEECCCCCEEEEE
Q 036605 101 KSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSDD--V---GPLQYVSASDGAKIIITA 173 (340)
Q Consensus 101 d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~~--~---~~v~~~~~s~~~~~l~s~ 173 (340)
|..+.+.+.++.... ....+++++..|+..+++ |.++|..+.+.+..+... . ..++.+.|. +| .|++.
T Consensus 113 D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan 187 (262)
T 3nol_A 113 NIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFAN 187 (262)
T ss_dssp ETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEE
T ss_pred ECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEE
Confidence 999999999887543 223445677777765544 999999999888776431 1 334567776 56 46665
Q ss_pred EcCCCeEEEEEccCCCCCccCCce
Q 036605 174 GYGEKHLQVWRCDISSKTVNKGPA 197 (340)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~ 197 (340)
...++.|.+.|. .+++....+.
T Consensus 188 ~w~~~~I~vIDp--~tG~V~~~Id 209 (262)
T 3nol_A 188 VWQTNKIVRIDP--ETGKVTGIID 209 (262)
T ss_dssp ETTSSEEEEECT--TTCBEEEEEE
T ss_pred EccCCeEEEEEC--CCCcEEEEEE
Confidence 666888999887 5665444333
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.89 E-value=1.9e-07 Score=83.91 Aligned_cols=187 Identities=11% Similarity=0.071 Sum_probs=129.9
Q ss_pred EEEEEc-CCCcEEEEEccCCeeEEEecCCCCCCeEEEEE-e-cCCCEEEEEe------------------CCCcEEEEeC
Q 036605 44 LLALGT-SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAF-A-KKGRSLHVVG------------------TNGMASEMKS 102 (340)
Q Consensus 44 ~l~~g~-~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~-~-~~~~~l~s~~------------------~dg~i~~wd~ 102 (340)
+|++.. .++.|.+.|+.+.+....+.-.....+..+++ + |+++++++++ .++.+.++|.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 555544 46679999999999777443213346889998 5 8999999885 2357999999
Q ss_pred CCCeEEEEeecCCCCeeEEEEccCCCEEEEec----------------------------------------CcEEEEEC
Q 036605 103 EMGEVIREFKASEKPISSSAFLCEEKIFALAS----------------------------------------SEVRILSL 142 (340)
Q Consensus 103 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----------------------------------------~~i~i~d~ 142 (340)
.+.+...++.... ....++++|+|+++++.+ +.|.+.|.
T Consensus 183 ~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~ 261 (595)
T 1fwx_A 183 DKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDG 261 (595)
T ss_dssp TTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEEC
T ss_pred CCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeC
Confidence 9999888877544 457788999999987632 11667777
Q ss_pred CC--Cce-eEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCC----CCc--c--CCceeeecCCCeeeeeec
Q 036605 143 EN--GEE-VLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISS----KTV--N--KGPALSMRHSPVAIDCKN 211 (340)
Q Consensus 143 ~~--~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~----~~~--~--~~~~~~~~~~~~~~~~~~ 211 (340)
.+ ++. +..+.. .....++.++|||+++++++..+.+|.++|+.... ++. . .......+..+....+
T Consensus 262 ~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF-- 338 (595)
T 1fwx_A 262 RKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF-- 338 (595)
T ss_dssp SGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE--
T ss_pred cccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE--
Confidence 76 444 344432 23457899999999999999889999999994210 000 0 0111223444555555
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 212 SPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 212 ~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+++|...++.--|+.|.+||+..
T Consensus 339 ---~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 339 ---DGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ---CTTSEEEEEETTTTEEEEEEHHH
T ss_pred ---CCCCeEEEEEecCCcEEEEEhhH
Confidence 88995556777899999999876
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.87 E-value=2.5e-07 Score=86.47 Aligned_cols=158 Identities=14% Similarity=0.161 Sum_probs=110.1
Q ss_pred EEEeeccccccccccCceEEEEEcCCC-------------------cEEEEEccCCeeEEEecCCCC--------CCeEE
Q 036605 26 CLACGFVGKKRRKERGTLLLALGTSNG-------------------DILAVDVLTGEMKWKSTGRHP--------GGLAG 78 (340)
Q Consensus 26 ~l~~sp~~~~~~~~~~~~~l~~g~~dg-------------------~i~i~d~~~~~~~~~~~~~h~--------~~v~~ 78 (340)
.+++.|++. ++++++.++ .|..+|..+|+.++.++..+. .....
T Consensus 247 ~~~~d~~~~---------~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l 317 (677)
T 1kb0_A 247 SMTFDAELN---------TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMIL 317 (677)
T ss_dssp CEEEETTTT---------EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEE
T ss_pred ceeEcCCCC---------EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEE
Confidence 467788777 788877664 599999999999998764221 12233
Q ss_pred EEEecCC---CEEEEEeCCCcEEEEeCCCCeEEEEeecCCCC-----------e------------------------eE
Q 036605 79 LAFAKKG---RSLHVVGTNGMASEMKSEMGEVIREFKASEKP-----------I------------------------SS 120 (340)
Q Consensus 79 v~~~~~~---~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~-----------i------------------------~~ 120 (340)
+....+| ..++.++.+|.++++|..+|+.+..+...... + ..
T Consensus 318 ~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 318 ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 3344467 67889999999999999999988765432110 1 15
Q ss_pred EEEccCCCEEEEec---------------------------------------------CcEEEEECCCCceeEEeecCC
Q 036605 121 SAFLCEEKIFALAS---------------------------------------------SEVRILSLENGEEVLKFSDDV 155 (340)
Q Consensus 121 l~~~~~~~~l~~~~---------------------------------------------~~i~i~d~~~~~~~~~~~~~~ 155 (340)
++++|+..++++.. +.|..||+.+++.+-++.. .
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~ 476 (677)
T 1kb0_A 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-V 476 (677)
T ss_dssp CEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-S
T ss_pred ceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-C
Confidence 68889888776521 4499999999988866653 2
Q ss_pred CCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCc
Q 036605 156 GPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGP 196 (340)
Q Consensus 156 ~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~ 196 (340)
.++....+..++..++.++. |+.+++||. .+++.+..+
T Consensus 477 ~~~~~g~~~~~g~~v~~g~~-dg~l~a~D~--~tG~~lw~~ 514 (677)
T 1kb0_A 477 SPWNGGTLTTAGNVVFQGTA-DGRLVAYHA--ATGEKLWEA 514 (677)
T ss_dssp SSCCCCEEEETTTEEEEECT-TSEEEEEET--TTCCEEEEE
T ss_pred CCCcCcceEeCCCEEEEECC-CCcEEEEEC--CCCceeeee
Confidence 33444455566777887655 999999998 566554433
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.85 E-value=1e-07 Score=80.86 Aligned_cols=177 Identities=15% Similarity=0.187 Sum_probs=121.3
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAF 123 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~ 123 (340)
.|.+|+.++.|..+|.. ++..+.+.. +...+.++...+++. |+.++.++.|..+|.. ++.+..+......+.++.+
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 47788889999999988 777777765 555567777776665 6667888999999998 8877777666667788888
Q ss_pred ccCCCEEEEecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCC
Q 036605 124 LCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHS 203 (340)
Q Consensus 124 ~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 203 (340)
.+++.+++.. +.|..+| .+++.+..+......+.++...++|.. ..+.. ++.+..++. .+....... ...
T Consensus 185 d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~-~~gl~~~~~---~g~~~~~~~--~~~- 254 (330)
T 3hxj_A 185 GKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSL-DGHLYAINP---DGTEKWRFK--TGK- 254 (330)
T ss_dssp CTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEET-TTEEEEECT---TSCEEEEEE--CSS-
T ss_pred cCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcC-CCeEEEECC---CCCEeEEee--CCC-
Confidence 8888877777 7799999 777777666655566888888888754 44455 677877763 333221111 111
Q ss_pred CeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCC
Q 036605 204 PVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVS 239 (340)
Q Consensus 204 ~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~ 239 (340)
...... .. .++ ..|..++.+|.|+.+|. +++
T Consensus 255 ~~~~~~--~~-~~~-g~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 255 RIESSP--VI-GNT-DTIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp CCCSCC--EE-CTT-SCEEEECTTCEEEEECT-TSC
T ss_pred Cccccc--eE-cCC-CeEEEecCCCCEEEECC-CCc
Confidence 111111 11 233 35777888888999985 443
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.85 E-value=1.7e-10 Score=100.01 Aligned_cols=164 Identities=9% Similarity=-0.040 Sum_probs=85.3
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCC-CeE-EE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPG-GLA-GL 79 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~-~v~-~v 79 (340)
||..+|+++..+. . ..+.+..+..+++ ++++++.||.|+.||.++|+.++.+.. +.. .+. ..
T Consensus 24 ~d~~tG~~~W~~~----~--~~~~s~p~~~~g~---------~~v~~s~dg~l~a~d~~tG~~~w~~~~-~~~~~~~~sp 87 (369)
T 2hz6_A 24 VSKRTGSIKWTLK----E--DPVLQVPTHVEEP---------AFLPDPNDGSLYTLGSKNNEGLTKLPF-TIPELVQASP 87 (369)
T ss_dssp EETTTCCEEEEEE----C--CCSCCCC-----C---------CEEECTTTCCEEEC-----CCSEECSC-CHHHHHTTCS
T ss_pred EECCCCCEEEEec----C--CCceecceEcCCC---------EEEEeCCCCEEEEEECCCCceeeeeec-cCccccccCc
Confidence 7888999887776 2 3444555566776 688888999999999999988777764 211 110 11
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEeecCCCC
Q 036605 80 AFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKFSDDVGP 157 (340)
Q Consensus 80 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~~~~~~~ 157 (340)
.+. ++..+++++.|+.|+.||..+|+.+..+..+. ...++|++..+++++ +.|+.||..+|+.+..+..+.
T Consensus 88 ~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-- 160 (369)
T 2hz6_A 88 CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-- 160 (369)
T ss_dssp CC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--
T ss_pred eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--
Confidence 111 34578888889999999999999887776543 234556777776643 459999999998765553211
Q ss_pred eEEEEECCCC---CEEEEEEcCCCeEEEEEccCCCCC
Q 036605 158 LQYVSASDGA---KIIITAGYGEKHLQVWRCDISSKT 191 (340)
Q Consensus 158 v~~~~~s~~~---~~l~s~~~~d~~i~iwd~~~~~~~ 191 (340)
.....+.++. ..+++++. ++.|..||. .+++
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~-dg~v~a~d~--~tG~ 194 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNG-DGLVVTVDS--ESGD 194 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEET-SCEEEEECT--TTCC
T ss_pred ccCccccCCccccceEEEECC-CCEEEEEEC--CCCc
Confidence 1223344432 35666566 899999998 4444
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.82 E-value=1.7e-06 Score=74.92 Aligned_cols=179 Identities=12% Similarity=0.135 Sum_probs=111.3
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCe-----
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPI----- 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i----- 118 (340)
.+++++.++.|..+|..+|+.++.... ........... +..++.++.++.|..+|..+|+.+..+.......
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~-~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKV-AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeC-CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 588888999999999999998888764 22222222222 4578888999999999999999887765432211
Q ss_pred eEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeecCCCC----------e-EEEEECCCCCEEEEEEcCCCeEEEEEc
Q 036605 119 SSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSDDVGP----------L-QYVSASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~~~~~----------v-~~~~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
....+. ++ .++.+ ++.+..+|..+++.+..+...... + ....+ .+..++.++. ++.+..+|.
T Consensus 182 ~~~~~~-~~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~-~g~l~~~d~ 256 (376)
T 3q7m_A 182 SAPTTA-FG-AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAY-NGNLTALDL 256 (376)
T ss_dssp CCCEEE-TT-EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECT-TSCEEEEET
T ss_pred CCcEEE-CC-EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEec-CcEEEEEEC
Confidence 222232 34 34443 345999999999887665422100 0 11111 2346666566 889999997
Q ss_pred cCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 186 DISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+++..... .... .... ..++..++.++.+|.|+.+|..+++.+.
T Consensus 257 --~tG~~~w~~----~~~~-~~~~-----~~~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 257 --RSGQIMWKR----ELGS-VNDF-----IVDGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp --TTCCEEEEE----CCCC-EEEE-----EEETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred --CCCcEEeec----cCCC-CCCc-----eEECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 444432211 1111 1112 1235678888889999999998876543
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.80 E-value=3.4e-07 Score=77.59 Aligned_cols=186 Identities=15% Similarity=0.144 Sum_probs=120.0
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKS 102 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~ 102 (340)
.+.++...+++. +.+|+.++.|..||.. ++..+.+.. ....+.++.+.+++.. +.++ +.|..+|
T Consensus 138 ~~~~~~~~~~g~----------l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~l-~v~t--~~l~~~d- 201 (330)
T 3hxj_A 138 IYATPIVSEDGT----------IYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGTI-YFGS--DKVYAIN- 201 (330)
T ss_dssp CCSCCEECTTSC----------EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCCE-EEES--SSEEEEC-
T ss_pred eeeeeEEcCCCE----------EEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCEE-EEEe--CEEEEEC-
Confidence 345555566666 7778888999999998 887777765 4556777788777764 4445 8899999
Q ss_pred CCCeEEEEeecCCCCeeEEEEccCCCEEEEe-cCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEE
Q 036605 103 EMGEVIREFKASEKPISSSAFLCEEKIFALA-SSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQ 181 (340)
Q Consensus 103 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~ 181 (340)
.+++.+..+......+.++.+.+++.+.+.. ++.+..+|. +++.+..+......+..+.+.+++. |..+.. ++.|.
T Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~ggl~ 278 (330)
T 3hxj_A 202 PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSY-DGHLY 278 (330)
T ss_dssp TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECT-TCEEE
T ss_pred CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecC-CCCEE
Confidence 7787777766656678889999998777665 455888874 5666666654444445566666664 555455 77888
Q ss_pred EEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 182 VWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 182 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.+|. .++...... ... ..+.. .....++ .|..++.+|.+++.....
T Consensus 279 ~~d~---~g~~~~~~~--~~~-~~~~~---~~~d~~g-~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 279 AINP---DGTEKWNFE--TGS-WIIAT---PVIDENG-TIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EECT---TSCEEEEEE--CSS-CCCSC---CEECTTC-CEEEECTTSCEEEEEC--
T ss_pred EECC---CCcEEEEEE--cCC-ccccc---eEEcCCC-EEEEEcCCCeEEEEeccc
Confidence 8884 333222111 111 11111 1113444 467789999998887654
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=3e-06 Score=67.69 Aligned_cols=166 Identities=11% Similarity=0.051 Sum_probs=108.9
Q ss_pred ceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCC--CcEEEEEccCCeeEEEecCCCCCCeEEEEEecCC
Q 036605 8 SLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSN--GDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKG 85 (340)
Q Consensus 8 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d--g~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~ 85 (340)
+++.+|. .....-.-.|.|++ +. ++.+.+.+ ..|+.+|+++++.+.++.- ............+
T Consensus 10 ~v~~~~p---hd~~~ftqGL~~~~-~~---------LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~~~ 74 (243)
T 3mbr_X 10 RVVKRYP---HDTTAFTEGLFYLR-GH---------LYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVAWR 74 (243)
T ss_dssp EEEEEEE---CCTTCCEEEEEEET-TE---------EEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEET
T ss_pred EEEEEcC---CCCccccccEEEEC-CE---------EEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEEeC
Confidence 4556675 12234456788986 56 56666654 4899999999998887763 2233333333346
Q ss_pred CEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec--CC---CC
Q 036605 86 RSLHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD--DV---GP 157 (340)
Q Consensus 86 ~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~--~~---~~ 157 (340)
..|+... .++.+.+||..+.+.+.++.....+ .. +.+++..|+.++++ |.++|..+.+.+..+.- +. ..
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wg--lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WA--LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CE--EEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eE--EeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 6666654 5789999999999999998754432 34 44667766664444 99999999988877643 21 34
Q ss_pred eEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCC
Q 036605 158 LQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKG 195 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~ 195 (340)
++.+.+. +|. +++....+..|.+.|. .+++....
T Consensus 152 lNeLe~~-~G~-lyanvw~s~~I~vIDp--~tG~V~~~ 185 (243)
T 3mbr_X 152 LNELEWV-NGE-LLANVWLTSRIARIDP--ASGKVVAW 185 (243)
T ss_dssp EEEEEEE-TTE-EEEEETTTTEEEEECT--TTCBEEEE
T ss_pred ceeeEEe-CCE-EEEEECCCCeEEEEEC--CCCCEEEE
Confidence 5566665 554 5555555778888887 55554443
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.79 E-value=6.8e-07 Score=83.72 Aligned_cols=158 Identities=13% Similarity=0.144 Sum_probs=107.5
Q ss_pred EEEeeccccccccccCceEEEEEcCCCc-------------------EEEEEccCCeeEEEecCC-CC-------CCeEE
Q 036605 26 CLACGFVGKKRRKERGTLLLALGTSNGD-------------------ILAVDVLTGEMKWKSTGR-HP-------GGLAG 78 (340)
Q Consensus 26 ~l~~sp~~~~~~~~~~~~~l~~g~~dg~-------------------i~i~d~~~~~~~~~~~~~-h~-------~~v~~ 78 (340)
.+++.|+.. ++++++.++. |..+|..+|+.++.++.. |. ..+..
T Consensus 239 ~~~~d~~~~---------~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l 309 (689)
T 1yiq_A 239 SFAYDPELN---------LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMIL 309 (689)
T ss_dssp CEEEETTTT---------EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEE
T ss_pred ceeEcCCCC---------EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEE
Confidence 567788777 7888888764 999999999999988652 21 12222
Q ss_pred EEEecCCC---EEEEEeCCCcEEEEeCCCCeEEEEeecCCC---------------------------------------
Q 036605 79 LAFAKKGR---SLHVVGTNGMASEMKSEMGEVIREFKASEK--------------------------------------- 116 (340)
Q Consensus 79 v~~~~~~~---~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~--------------------------------------- 116 (340)
.....+|+ .++.++.+|.++++|..+|+.+........
T Consensus 310 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~ 389 (689)
T 1yiq_A 310 AELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAH 389 (689)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSS
T ss_pred EeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccccc
Confidence 22233565 788889999999999999998754321110
Q ss_pred CeeEEEEccCCCEEEEe-----------------------------------------------cCcEEEEECCCCceeE
Q 036605 117 PISSSAFLCEEKIFALA-----------------------------------------------SSEVRILSLENGEEVL 149 (340)
Q Consensus 117 ~i~~l~~~~~~~~l~~~-----------------------------------------------~~~i~i~d~~~~~~~~ 149 (340)
.-..++++|+..++++. ++.|..||+.+++.+-
T Consensus 390 ~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W 469 (689)
T 1yiq_A 390 DWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAW 469 (689)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEE
T ss_pred CCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEe
Confidence 01136788887777653 1449999999999887
Q ss_pred EeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCc
Q 036605 150 KFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGP 196 (340)
Q Consensus 150 ~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~ 196 (340)
++..+.. ...-.+...+..++.++. |+.++.||. .+++.+..+
T Consensus 470 ~~~~~~~-~~~g~~~tagglvf~gt~-dg~l~a~D~--~tG~~lw~~ 512 (689)
T 1yiq_A 470 EVPYVTI-FNGGTLSTAGNLVFEGSA-DGRVIAYAA--DTGEKLWEQ 512 (689)
T ss_dssp EEEESSS-CCCCEEEETTTEEEEECT-TSEEEEEET--TTCCEEEEE
T ss_pred EccCCCC-ccCccceECCCEEEEECC-CCcEEEEEC--CCCccceee
Confidence 7755432 233344556667777665 999999998 566654433
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.76 E-value=3.2e-06 Score=68.15 Aligned_cols=167 Identities=10% Similarity=0.038 Sum_probs=110.7
Q ss_pred ceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCE
Q 036605 8 SLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRS 87 (340)
Q Consensus 8 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 87 (340)
+++.+|. .....-...|.|+ ++. ++.+.+.+|.|+++|+++++.+..+ - .. ........+++..
T Consensus 44 ~Vv~~~p---hd~~~ftqGL~~~-~~~---------Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~-~~FgeGit~~g~~ 107 (268)
T 3nok_A 44 HIIREYP---HATNAFTQGLVFH-QGH---------FFESTGHQGTLRQLSLESAQPVWME-R-LG-NIFAEGLASDGER 107 (268)
T ss_dssp EEEEEEE---CCTTCCEEEEEEE-TTE---------EEEEETTTTEEEECCSSCSSCSEEE-E-CT-TCCEEEEEECSSC
T ss_pred EEEEEEc---CCCccccceEEEE-CCE---------EEEEcCCCCEEEEEECCCCcEEeEE-C-CC-CcceeEEEEeCCE
Confidence 3455664 1122334678887 356 7778888899999999999977776 2 22 3333222334556
Q ss_pred EEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--EEEEECCCCceeEEeec--CC---CCeE
Q 036605 88 LHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE--VRILSLENGEEVLKFSD--DV---GPLQ 159 (340)
Q Consensus 88 l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~--i~i~d~~~~~~~~~~~~--~~---~~v~ 159 (340)
|+... .++.+.+||..+.+.+.++...... .. +++++..|+.++++ |.++|..+.+.+..+.- +. ..++
T Consensus 108 Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wG--Lt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 108 LYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WG--LCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp EEEEESSSCEEEEEETTTTEEEEEEECSSCC-CC--EEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred EEEEEccCCEEEEEECCcCcEEEEEeCCCce-eE--EecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccccc
Confidence 66554 5789999999999999998754322 33 34677777765544 99999999988877643 22 2456
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCce
Q 036605 160 YVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPA 197 (340)
Q Consensus 160 ~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~ 197 (340)
.+.|. +| .|++....++.|.+.|. .+++....+.
T Consensus 185 eLe~~-dG-~lyanvw~s~~I~vIDp--~TG~V~~~Id 218 (268)
T 3nok_A 185 ELECA-NG-VIYANIWHSSDVLEIDP--ATGTVVGVID 218 (268)
T ss_dssp EEEEE-TT-EEEEEETTCSEEEEECT--TTCBEEEEEE
T ss_pred ccEEe-CC-EEEEEECCCCeEEEEeC--CCCcEEEEEE
Confidence 67776 66 46665655888999887 5665544444
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.75 E-value=9.8e-07 Score=71.09 Aligned_cols=155 Identities=12% Similarity=0.082 Sum_probs=107.6
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+|+.+|+++...... .........+++ + +.++...++.+.+||.++.+.+.++.... .=..+
T Consensus 70 vD~~Tgkv~~~~~l~-----~~~FgeGit~~g~~---------ly~ltw~~~~v~v~D~~t~~~~~ti~~~~--eG~gl- 132 (262)
T 3nol_A 70 VDIESGKTLQQIELG-----KRYFGEGISDWKDK---------IVGLTWKNGLGFVWNIRNLRQVRSFNYDG--EGWGL- 132 (262)
T ss_dssp ECTTTCCEEEEEECC-----TTCCEEEEEEETTE---------EEEEESSSSEEEEEETTTCCEEEEEECSS--CCCCE-
T ss_pred EECCCCcEEEEEecC-----CccceeEEEEeCCE---------EEEEEeeCCEEEEEECccCcEEEEEECCC--CceEE-
Confidence 588889888777632 233333333345 4 55555678999999999999998887522 11333
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecC--C---CCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeec
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKAS--E---KPISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSD 153 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~---~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~ 153 (340)
++++..|+.+..++.|.++|..+.+.+..+... . ..++.+.+. +|+..+.. +..|.+.|..+++.+..+..
T Consensus 133 -t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 133 -THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp -EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred -ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 356888887776788999999999988776542 1 234457776 67655442 44599999999998877643
Q ss_pred C------------CCCeEEEEECCCCCEEEEEEc
Q 036605 154 D------------VGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 154 ~------------~~~v~~~~~s~~~~~l~s~~~ 175 (340)
. ....+.++|+|+++.|+.++.
T Consensus 211 ~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 211 NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 134588999999888888776
No 244
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.69 E-value=2.9e-06 Score=79.23 Aligned_cols=183 Identities=14% Similarity=0.165 Sum_probs=114.5
Q ss_pred CCcEEEEEccCCeeEEEecCC--CCC----------------------------CeEEEEEecCCCEEEEEeCCC-----
Q 036605 51 NGDILAVDVLTGEMKWKSTGR--HPG----------------------------GLAGLAFAKKGRSLHVVGTNG----- 95 (340)
Q Consensus 51 dg~i~i~d~~~~~~~~~~~~~--h~~----------------------------~v~~v~~~~~~~~l~s~~~dg----- 95 (340)
+|.|+.+|..+|+.++++... ... ....++++++...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999999987531 110 112468888888999887765
Q ss_pred --------------cEEEEeCCCCeEEEEeecCC---------CCeeEEEEccCCC---EEEEecCc--EEEEECCCCce
Q 036605 96 --------------MASEMKSEMGEVIREFKASE---------KPISSSAFLCEEK---IFALASSE--VRILSLENGEE 147 (340)
Q Consensus 96 --------------~i~~wd~~~~~~~~~~~~~~---------~~i~~l~~~~~~~---~l~~~~~~--i~i~d~~~~~~ 147 (340)
.|..+|..+|+.+..+.... .+.....+..+|+ .++.++.+ ++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 39999999999988876421 2222223334665 45555444 99999999988
Q ss_pred eEEeecCCC------------C------------------------eEEEEECCCCCEEEEEEc----------------
Q 036605 148 VLKFSDDVG------------P------------------------LQYVSASDGAKIIITAGY---------------- 175 (340)
Q Consensus 148 ~~~~~~~~~------------~------------------------v~~~~~s~~~~~l~s~~~---------------- 175 (340)
+..+..... + -..++++|+...++....
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 744322110 0 012567777666554211
Q ss_pred -------------------CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 176 -------------------GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 176 -------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
.++.|..||+ .+++..-... ...+.....+ ...+.+++.++.||.++.||..
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~--~tG~~~W~~~--~~~~~~~~~~-----~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDP--VKQKAAWKVP--YPTHWNGGTL-----STAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEET--TTTEEEEEEE--ESSSCCCCEE-----EETTTEEEEECTTSEEEEEETT
T ss_pred cccccCccccccCCCCCCCccceEEEEeC--CCCcEEEEcc--CCCCCcCcee-----EeCCCEEEEECCcccchhhhhh
Confidence 1367888887 4554432222 1111111111 2346778889999999999999
Q ss_pred CCCccC
Q 036605 237 TVSQDE 242 (340)
Q Consensus 237 ~~~~~~ 242 (340)
+++.+.
T Consensus 488 tG~~l~ 493 (668)
T 1kv9_A 488 KGEALW 493 (668)
T ss_dssp TCCEEE
T ss_pred cChhhe
Confidence 987765
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.68 E-value=2e-06 Score=74.49 Aligned_cols=189 Identities=13% Similarity=0.151 Sum_probs=113.5
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCC--------CCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRH--------PGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE 115 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h--------~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~ 115 (340)
.+++++.++.|..||.++|+.++.+.... ...+.+. ...++..++.++.++.|..+|..+|+.+.......
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~ 133 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG 133 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC
Confidence 58888889999999999999888776411 2233222 22246688888999999999999999887766543
Q ss_pred CCeeEEEEccCCCEEEE-ecCcEEEEECCCCceeEEeecCCCCe-----EEEEECCCCCEEEEEEcCCCeEEEEEccCCC
Q 036605 116 KPISSSAFLCEEKIFAL-ASSEVRILSLENGEEVLKFSDDVGPL-----QYVSASDGAKIIITAGYGEKHLQVWRCDISS 189 (340)
Q Consensus 116 ~~i~~l~~~~~~~~l~~-~~~~i~i~d~~~~~~~~~~~~~~~~v-----~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~ 189 (340)
.......+. ++..++. .++.|..+|..+++.+..+....... ...... +..++.+.. ++.+..+|. .+
T Consensus 134 ~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~-~g~l~~~d~--~t 207 (376)
T 3q7m_A 134 EALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGD-NGRVSAVLM--EQ 207 (376)
T ss_dssp CCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCT-TTEEEEEET--TT
T ss_pred ceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcC-CCEEEEEEC--CC
Confidence 322223333 4444433 34459999999998876664332111 122222 335666555 889999997 44
Q ss_pred CCccCCceeeecCCCe------eeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 190 KTVNKGPALSMRHSPV------AIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 190 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
++...... ...+.. ...+.... ...+..++.++.+|.++.+|..+++.+.
T Consensus 208 G~~~w~~~--~~~~~~~~~~~~~~~~~~~p-~~~~~~v~~~~~~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 208 GQMIWQQR--ISQATGSTEIDRLSDVDTTP-VVVNGVVFALAYNGNLTALDLRSGQIMW 263 (376)
T ss_dssp CCEEEEEE--CCC-----------CCCCCC-EEETTEEEEECTTSCEEEEETTTCCEEE
T ss_pred CcEEEEEe--cccCCCCcccccccccCCCc-EEECCEEEEEecCcEEEEEECCCCcEEe
Confidence 44322211 111000 00010010 1134567788889999999998876653
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.68 E-value=9.2e-06 Score=68.69 Aligned_cols=152 Identities=9% Similarity=0.068 Sum_probs=102.6
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEec--CC-----------------CCCCeEEEEEec
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKST--GR-----------------HPGGLAGLAFAK 83 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~--~~-----------------h~~~v~~v~~~~ 83 (340)
...+++|.++++ +++++..++.|..|+..+++.. .+. .. ....+.++++.+
T Consensus 20 ~p~~i~~d~~g~---------~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 20 APNSFTFDSTNK---------GFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL 89 (322)
T ss_dssp CCCCEECCTTCS---------SEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred CceEEEEcCCCC---------EEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcC
Confidence 456788999988 7889999999999998776533 221 10 013578999998
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEeec-----CCCCeeEEEEcc-CCCEEEEec-------------------CcEE
Q 036605 84 KGRSLHVVGTNGMASEMKSEMGEVIREFKA-----SEKPISSSAFLC-EEKIFALAS-------------------SEVR 138 (340)
Q Consensus 84 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-----~~~~i~~l~~~~-~~~~l~~~~-------------------~~i~ 138 (340)
++..|+.+...+.|..+|..++.. ..+.. .......+++.+ +|.+.++.. +.|.
T Consensus 90 ~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 90 QNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred CCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 444566666666688999876542 22211 113467899999 998777632 2388
Q ss_pred EEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 139 ILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 139 i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
.||..+++...... .......+++++++++|+.+....+.|.+|++.
T Consensus 169 ~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 169 KYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp EEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred EEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 88987765332222 123456799999999887766657899999983
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=5.6e-05 Score=63.34 Aligned_cols=195 Identities=10% Similarity=0.052 Sum_probs=116.8
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-C-CcEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-N-GMASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d-g~i~~ 99 (340)
.....++|+++++ ++++-..++.|..||.... ....+. ..+...++++.++|+.+++... + ..|..
T Consensus 32 ~~pegia~~~~g~---------lyv~d~~~~~I~~~d~~g~-~~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 32 TFLENLASAPDGT---------IFVTNHEVGEIVSITPDGN-QQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp CCEEEEEECTTSC---------EEEEETTTTEEEEECTTCC-EEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCC---------EEEEeCCCCeEEEECCCCc-eEEEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 4567899999999 7777778899999997754 333333 2346889999999985554333 2 24777
Q ss_pred EeCCCCeEEEEeec-CCCCeeEEEEccCCCEEEEe--cCcEEEEECCCCce-eEEee---------cCCCCeEEEEECCC
Q 036605 100 MKSEMGEVIREFKA-SEKPISSSAFLCEEKIFALA--SSEVRILSLENGEE-VLKFS---------DDVGPLQYVSASDG 166 (340)
Q Consensus 100 wd~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~-~~~~~---------~~~~~v~~~~~s~~ 166 (340)
+|..+++....... .......++..+++..+++. .+.|+.+|...++. +.... ........+ +++
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~d 177 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRF 177 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEE
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcC
Confidence 88888875433322 12233455656655544443 34588899876421 11100 111234455 788
Q ss_pred CCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 167 AKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 167 ~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
+.+|+.+....+.|..|+++. .+.......+.....+.-+.+ .++|.++++....+.|.+++..
T Consensus 178 g~~lyv~d~~~~~I~~~~~~~-~g~~~~~~~~~~~~~P~gi~v-----d~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 178 GNFLYVSNTEKMLLLRIPVDS-TDKPGEPEIFVEQTNIDDFAF-----DVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTEEEEEETTTTEEEEEEBCT-TSCBCCCEEEEESCCCSSEEE-----BTTCCEEEECBTTCCEEEECTT
T ss_pred CCEEEEEeCCCCEEEEEEeCC-CCCCCccEEEeccCCCCCeEE-----CCCCCEEEEeCCCCeEEEECCC
Confidence 888888777688999999842 122111111111112223333 5677776666667788888754
No 248
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.68 E-value=2.4e-07 Score=79.60 Aligned_cols=175 Identities=7% Similarity=-0.071 Sum_probs=111.7
Q ss_pred EEEEEcCCC----cEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe----------CCCcEEEEeCCCCeEEE
Q 036605 44 LLALGTSNG----DILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG----------TNGMASEMKSEMGEVIR 109 (340)
Q Consensus 44 ~l~~g~~dg----~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~dg~i~~wd~~~~~~~~ 109 (340)
.+++-..++ +|.++|..+++.+.++..+. .+ .+.++||++.++++. .++.|.+||+.+++.+.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 445544444 88899999999998887633 34 799999999999986 36789999999999999
Q ss_pred EeecC-------CCCeeEEEEccCCCEEEEec----CcEEE--EECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcC
Q 036605 110 EFKAS-------EKPISSSAFLCEEKIFALAS----SEVRI--LSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYG 176 (340)
Q Consensus 110 ~~~~~-------~~~i~~l~~~~~~~~l~~~~----~~i~i--~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 176 (340)
++..+ ......++++|||++++++. ..+.+ +|+.+ +..+... +. ..+.|++...+.+...
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSC 183 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCC
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcC
Confidence 88654 12457899999999998753 34778 88877 4444321 11 1223444433333444
Q ss_pred CCeEEEEEccCC---CCCccCC--ceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 177 EKHLQVWRCDIS---SKTVNKG--PALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 177 d~~i~iwd~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
|+.+.+.++... .++.... ..+..+..+. . .+++..++..+. +.+.+.|+..
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~------~~~~~~~~~vs~-~~V~viD~~~ 240 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q------ANYPGMLVWAVA-SSILQGDIPA 240 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E------ETTTTEEEECBS-SCCEEEECCS
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c------cccCCEEEEEcC-CEEEEEECCC
Confidence 888888887310 0211110 0111122222 1 244455555566 8899999864
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.67 E-value=3.7e-05 Score=66.75 Aligned_cols=200 Identities=9% Similarity=-0.057 Sum_probs=122.6
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~ 99 (340)
.....++|.+.+ . ++++-...+.|+.+++..+.....+.. .......+++++.+..|+.+. ..+.|.+
T Consensus 116 ~~~~gl~~d~~~~~---------ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~ 185 (386)
T 3v65_B 116 ENAIALDFHHRREL---------VFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEV 185 (386)
T ss_dssp SCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCCEEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEE
T ss_pred CccEEEEEecCCCe---------EEEEeCCCCcEEEEecCCCCcEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEE
Confidence 346789998755 5 566666788999999887654433333 333567889998666666654 4578999
Q ss_pred EeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 100 MKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 100 wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
.++........+...-.....+++.|.+..|+.++ ..|..+++..................++|+|++..|+.+..
T Consensus 186 ~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 186 ANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp CBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEET
T ss_pred EeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEEC
Confidence 98875543333333345678999999777665533 34888887654332222333455789999988888888777
Q ss_pred CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 176 GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
..+.|..++++ ...........+.+ +.-+.+ .++..+++-...+.|..++..+++.
T Consensus 266 ~~~~I~~~d~d--G~~~~~~~~~~~~~-P~giav------~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 266 KHHVIERANLD--GSHRKAVISQGLPH-PFAITV------FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp TTTEEEEECTT--SCSCEEEECSSCSS-EEEEEE------ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCEEEEEeCC--CCeeEEEEECCCCC-ceEEEE------ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 67889888874 21111111100111 122222 2334555556677788888555443
No 250
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.67 E-value=9.1e-05 Score=62.39 Aligned_cols=198 Identities=8% Similarity=-0.019 Sum_probs=121.4
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccC----CeeEEEecCCCCCCeEEEEEecCCCEEEEE-eCCC
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLT----GEMKWKSTGRHPGGLAGLAFAKKGRSLHVV-GTNG 95 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~dg 95 (340)
.....++|.+.+ + ++++-..++.|..+++.. ......+.. .-....++++++.+..|+.+ ...+
T Consensus 30 ~~p~g~~~d~~~~~---------ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavd~~~~~ly~~d~~~~ 99 (316)
T 1ijq_A 30 RNVVALDTEVASNR---------IYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLG 99 (316)
T ss_dssp SSEEEEEEETTTTE---------EEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CceEEEEEEeCCCE---------EEEEECCCCcEEEEECCCCCCCcccEEEEeC-CCCCcCEEEEeecCCeEEEEECCCC
Confidence 456789999865 5 666666779999999876 222222332 22356789998766666655 4568
Q ss_pred cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEe-ecCCCCeEEEEECCCCCEE
Q 036605 96 MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKF-SDDVGPLQYVSASDGAKII 170 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l 170 (340)
.|.++++........+.........+++.|.+..++.++ +.|..+++... ....+ ...-.....+++++++..|
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEE
T ss_pred EEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEE
Confidence 999999875544333433345678999999766554432 34888887543 33333 2234567899999988888
Q ss_pred EEEEcCCCeEEEEEccCCCCCccCCceeee-c--CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 171 ITAGYGEKHLQVWRCDISSKTVNKGPALSM-R--HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 171 ~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
+.+....+.|..+|++ . .....+. .. . ..+.-+.+ . ++..+++-...+.|..++..+++.
T Consensus 179 Y~~D~~~~~I~~~d~d--g-~~~~~~~-~~~~~~~~P~giav-----~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 179 YWVDSKLHSISSIDVN--G-GNRKTIL-EDEKRLAHPFSLAV-----F-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEETTTTEEEEEETT--S-CSCEEEE-ECTTTTSSEEEEEE-----E-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEECCCCeEEEEecC--C-CceEEEe-ecCCccCCcEEEEE-----E-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 8877767899999984 2 1111111 11 0 11222222 2 345555666677888888766543
No 251
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.66 E-value=2.2e-05 Score=63.51 Aligned_cols=198 Identities=10% Similarity=0.083 Sum_probs=124.5
Q ss_pred CCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcE
Q 036605 19 EPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMA 97 (340)
Q Consensus 19 ~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i 97 (340)
+....+..++|.|++ + ++++...++.|..+|.. ++.+.++.-.-....-.|++.+++.++++.-.++.+
T Consensus 24 g~~~~lSGla~~~~~~~---------L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l 93 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNT---------LFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAI 93 (255)
T ss_dssp TCCSCEEEEEEETTTTE---------EEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEE
T ss_pred CcccCcceeEEeCCCCE---------EEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcE
Confidence 455689999999986 5 66667788999999998 887777643133568889999888766665567888
Q ss_pred EEEeCCCCeE---EEEee------cCCCCeeEEEEccCCCEEEEec-Cc-EEEEECC---CCceeEEee-------cCCC
Q 036605 98 SEMKSEMGEV---IREFK------ASEKPISSSAFLCEEKIFALAS-SE-VRILSLE---NGEEVLKFS-------DDVG 156 (340)
Q Consensus 98 ~~wd~~~~~~---~~~~~------~~~~~i~~l~~~~~~~~l~~~~-~~-i~i~d~~---~~~~~~~~~-------~~~~ 156 (340)
.++++..... +.... ........|+++|.+..|+++. +. ..+|.+. ....+..+. .+..
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 8888765432 22221 1234568999999987665533 32 3444432 111121111 1335
Q ss_pred CeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeec--------CCCeeeeeecCCCCCCCCEEEEEeCCC
Q 036605 157 PLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMR--------HSPVAIDCKNSPNGEDGTVILAVAESG 228 (340)
Q Consensus 157 ~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~s~dg 228 (340)
.+..++++|....++..+...+.+.++|. .++....+.+.-+ ..+.-+.+ .++|. |+..++.+
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~---~g~~~~~~~L~~g~~~l~~~~~qpEGia~-----d~~G~-lyIvsE~n 244 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTL---VGEVIGEMSLTKGSRGLSHNIKQAEGVAM-----DASGN-IYIVSEPN 244 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECT---TCCEEEEEECSTTGGGCSSCCCSEEEEEE-----CTTCC-EEEEETTT
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcC---CCCEEEEEEcCCccCCcccccCCCCeeEE-----CCCCC-EEEEcCCc
Confidence 67899999987777666776888888886 3333333332211 12233334 67776 55557777
Q ss_pred cEEEEEC
Q 036605 229 VAYSWDL 235 (340)
Q Consensus 229 ~i~vwd~ 235 (340)
.++.|.-
T Consensus 245 ~~y~f~~ 251 (255)
T 3qqz_A 245 RFYRFTP 251 (255)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 7777653
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.64 E-value=9.9e-06 Score=64.68 Aligned_cols=155 Identities=12% Similarity=0.116 Sum_probs=106.7
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+|+.+|+++.....+ .........+.+ + +..+...++.+.+||..+.+.+.++... +.=..++
T Consensus 48 vD~~tgkv~~~~~l~-----~~~fgeGi~~~~~~---------ly~ltw~~~~v~v~D~~tl~~~~ti~~~--~~Gwglt 111 (243)
T 3mbr_X 48 VDLETGRILQRAEVP-----PPYFGAGIVAWRDR---------LIQLTWRNHEGFVYDLATLTPRARFRYP--GEGWALT 111 (243)
T ss_dssp EETTTCCEEEEEECC-----TTCCEEEEEEETTE---------EEEEESSSSEEEEEETTTTEEEEEEECS--SCCCEEE
T ss_pred EECCCCCEEEEEeCC-----CCcceeEEEEeCCE---------EEEEEeeCCEEEEEECCcCcEEEEEeCC--CCceEEe
Confidence 577888888777633 222222223334 4 5666677899999999999999888752 2224444
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC-----CCeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeec
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE-----KPISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSD 153 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~ 153 (340)
+++..|+.+..++.|.++|..+.+.+..+.... ..+..+.+. +|+..+.. +..|.+.|..+++.+..+..
T Consensus 112 --~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 112 --SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp --ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEEC
T ss_pred --eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEEC
Confidence 467778877778899999999999887765422 234556655 56555442 44499999999998877641
Q ss_pred C-------------CCCeEEEEECCCCCEEEEEEc
Q 036605 154 D-------------VGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 154 ~-------------~~~v~~~~~s~~~~~l~s~~~ 175 (340)
. ....+.++++|++..|+.++.
T Consensus 189 ~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 189 QALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp GGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 1 135688999998888888776
No 253
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.61 E-value=0.00013 Score=62.42 Aligned_cols=199 Identities=9% Similarity=-0.054 Sum_probs=120.6
Q ss_pred CeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEEE
Q 036605 23 SYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASEM 100 (340)
Q Consensus 23 ~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~w 100 (340)
....++|.+.+ . ++.+-...+.|+.+++..+.....+.. .......+++.+.+..|+.+. ..+.|.+.
T Consensus 74 ~~~~l~~d~~~~~---------ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~ 143 (349)
T 3v64_C 74 NAIALDFHHRREL---------VFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVA 143 (349)
T ss_dssp CEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccccE---------EEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEE
Confidence 46788998765 4 555666778899999887654433332 334567899998666666554 45789999
Q ss_pred eCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcC
Q 036605 101 KSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYG 176 (340)
Q Consensus 101 d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 176 (340)
++........+...-.....++++|.+..|+..+ ..|..+++........+.........+++++++..|+.+...
T Consensus 144 ~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~ 223 (349)
T 3v64_C 144 NLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 223 (349)
T ss_dssp ETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETT
T ss_pred cCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECC
Confidence 9875543333333345678999999766665432 448888876543222222234567899999988888887776
Q ss_pred CCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 177 EKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 177 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
.+.|..++++ ...........+.+ +.-+.+ .++..+++-...+.|..++..+++.
T Consensus 224 ~~~I~~~~~d--G~~~~~~~~~~~~~-P~giav------~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 224 HHVIERANLD--GSHRKAVISQGLPH-PFAITV------FEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp TTEEEEEETT--SCSCEEEECSSCSS-EEEEEE------ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCEEEEEeCC--CCceEEEEeCCCCC-ceEEEE------ECCEEEEecCCCCeEEEEEccCCCc
Confidence 7889999974 21111111100111 122222 2334455555667787777555443
No 254
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.60 E-value=0.0002 Score=62.45 Aligned_cols=204 Identities=7% Similarity=-0.066 Sum_probs=125.0
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCC----eeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCC
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTG----EMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNG 95 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg 95 (340)
..+..|+|++.+ + ++.+-...+.|+.+++... .....+.. .......+++.+.+..|+.+. ..+
T Consensus 112 ~~~~~l~~d~~~~~---------lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavD~~~~~lY~~d~~~~ 181 (400)
T 3p5b_L 112 RNVVALDTEVASNR---------IYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLG 181 (400)
T ss_dssp SCEEEEEEETTTTE---------EEEEETTTTEEEEEEC------CCCEEEECS-SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CcceEEeeeeccCc---------eEEEecCCCeEEEEEcccCCCCCcceEEEeC-CCCCcccEEEEecCCceEEEECCCC
Confidence 467789999865 4 5556567788998987652 22223332 345678999998666666654 468
Q ss_pred cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEE
Q 036605 96 MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIII 171 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 171 (340)
.|.+.++........+...-.....|++.|.+..|+.++ ..|...++........+...-.....|++++++..|+
T Consensus 182 ~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 182 TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp EEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred eEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEE
Confidence 899999886655444544445678999999766665533 3488888865433333333345778999999888888
Q ss_pred EEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 172 TAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 172 s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
.+....+.|..+|++ .. ....+............+ .. ..+..+++-...+.|..++..+++...
T Consensus 262 ~aD~~~~~I~~~d~d--G~-~~~~~~~~~~~l~~P~gl--~v--~~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 262 WVDSKLHSISSIDVN--GG-NRKTILEDEKRLAHPFSL--AV--FEDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EEETTTTEEEEEETT--SC-CCEEEEECSSTTSSEEEE--EE--ETTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred EEECCCCEEEEEeCC--CC-ccEEEEeCCCCCCCCEEE--EE--eCCEEEEecCCCCeEEEEEcCCCCceE
Confidence 877767889999974 22 111111100111112222 11 233445555666788888876665443
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.58 E-value=1.6e-05 Score=72.73 Aligned_cols=190 Identities=14% Similarity=0.112 Sum_probs=115.5
Q ss_pred EEEEEcC------CCcEEEEEccCCeeEEEecCCCCC------------------------------------Ce-EEEE
Q 036605 44 LLALGTS------NGDILAVDVLTGEMKWKSTGRHPG------------------------------------GL-AGLA 80 (340)
Q Consensus 44 ~l~~g~~------dg~i~i~d~~~~~~~~~~~~~h~~------------------------------------~v-~~v~ 80 (340)
.+++++. +|.|+.+|..+|+.++++...... .+ ..++
T Consensus 162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a 241 (571)
T 2ad6_A 162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA 241 (571)
T ss_dssp EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence 3556654 799999999999999887641110 00 2356
Q ss_pred EecCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEeecCCC------CeeE---EEEccCCC---EEEE
Q 036605 81 FAKKGRSLHVVGTN----------------GMASEMKSEMGEVIREFKASEK------PISS---SAFLCEEK---IFAL 132 (340)
Q Consensus 81 ~~~~~~~l~s~~~d----------------g~i~~wd~~~~~~~~~~~~~~~------~i~~---l~~~~~~~---~l~~ 132 (340)
+.++...++.+..+ +.|..+|..+|+.+..+..... .+.. +....+|+ .++.
T Consensus 242 ~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~ 321 (571)
T 2ad6_A 242 YDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSH 321 (571)
T ss_dssp EETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEE
T ss_pred EcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEE
Confidence 67777777776542 3599999999999887753211 1111 22234674 4445
Q ss_pred ecC--cEEEEECCCCceeEEeecCC-------------CCe--------------------------EEEEECCCCCEEE
Q 036605 133 ASS--EVRILSLENGEEVLKFSDDV-------------GPL--------------------------QYVSASDGAKIII 171 (340)
Q Consensus 133 ~~~--~i~i~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~s~~~~~l~ 171 (340)
++. .++++|..+|+.+..+.... .++ ..++|+|+...++
T Consensus 322 ~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~y 401 (571)
T 2ad6_A 322 IDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLY 401 (571)
T ss_dssp ECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred eCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEE
Confidence 444 49999999998876553221 011 2356778777776
Q ss_pred EEEc------------------------------------CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCC
Q 036605 172 TAGY------------------------------------GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNG 215 (340)
Q Consensus 172 s~~~------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (340)
.... .++.|..||+ .+++..-... .........+ .
T Consensus 402 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~--~tG~~~W~~~--~~~~~~~~~~-----~ 472 (571)
T 2ad6_A 402 AGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDL--TTGKAKWTKW--EKFAAWGGTL-----Y 472 (571)
T ss_dssp EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECT--TTCCEEEEEE--ESSCCCSBCE-----E
T ss_pred EEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEEC--CCCCEEEEec--CCCCccceeE-----E
Confidence 6542 2467777777 4444322221 1111111001 1
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 216 EDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 216 ~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
..+..++.++.||.|+.||..+++.+.
T Consensus 473 t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 473 TKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 234567779999999999999988776
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.57 E-value=1.3e-05 Score=64.71 Aligned_cols=154 Identities=14% Similarity=0.053 Sum_probs=106.2
Q ss_pred ccCCCCceeeeeeCCCCCCCCCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEE
Q 036605 2 WSTNDGSLLAEWKQPDGEPVVSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLA 80 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~ 80 (340)
+|+.+|+++..+. . ......-..+++ + +..+...++.+.+||.++.+.+.++... +.-..++
T Consensus 80 iD~~Tgkv~~~~l-~-----~~~FgeGit~~g~~---------Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~--~eGwGLt 142 (268)
T 3nok_A 80 LSLESAQPVWMER-L-----GNIFAEGLASDGER---------LYQLTWTEGLLFTWSGMPPQRERTTRYS--GEGWGLC 142 (268)
T ss_dssp CCSSCSSCSEEEE-C-----TTCCEEEEEECSSC---------EEEEESSSCEEEEEETTTTEEEEEEECS--SCCCCEE
T ss_pred EECCCCcEEeEEC-C-----CCcceeEEEEeCCE---------EEEEEccCCEEEEEECCcCcEEEEEeCC--CceeEEe
Confidence 5788888777662 2 122221123334 4 6666667899999999999999888752 2224444
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCC--C---CeeEEEEccCCCEEEEe--cCcEEEEECCCCceeEEeec
Q 036605 81 FAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASE--K---PISSSAFLCEEKIFALA--SSEVRILSLENGEEVLKFSD 153 (340)
Q Consensus 81 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~--~---~i~~l~~~~~~~~l~~~--~~~i~i~d~~~~~~~~~~~~ 153 (340)
++++.|+.+..++.|.++|..+.+.+..+.... . .+..+.+. +|+..+.. +..|.+.|..+++.+..+..
T Consensus 143 --~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 143 --YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp --EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred --cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 468888888778999999999999888765422 1 34566766 66655443 44499999999998876642
Q ss_pred C-------------CCCeEEEEECCCCCEEEEEEc
Q 036605 154 D-------------VGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 154 ~-------------~~~v~~~~~s~~~~~l~s~~~ 175 (340)
. ....+.++++|++..|+.++.
T Consensus 220 ~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 220 SALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp HHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 1 135688999998877777665
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.53 E-value=9.8e-05 Score=60.44 Aligned_cols=150 Identities=8% Similarity=-0.058 Sum_probs=97.4
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC---CcE
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN---GMA 97 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---g~i 97 (340)
.....+++.|++ . ++++-...+.|.+++.........+.. .......++++|++..|+.+... +.|
T Consensus 79 ~~p~~ia~d~~~~~---------lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I 148 (267)
T 1npe_A 79 GSPEGIALDHLGRT---------IFWTDSQLDRIEVAKMDGTQRRVLFDT-GLVNPRGIVTDPVRGNLYWTDWNRDNPKI 148 (267)
T ss_dssp CCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEETTTTEEEEEECCSSSCEE
T ss_pred CCccEEEEEecCCe---------EEEEECCCCEEEEEEcCCCCEEEEEEC-CCCCccEEEEeeCCCEEEEEECCCCCcEE
Confidence 456789999865 5 555666778999999865432222222 22467899999987777776643 688
Q ss_pred EEEeCCCCeEEEEe-ecCCCCeeEEEEccCCCEEEEec---CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEE
Q 036605 98 SEMKSEMGEVIREF-KASEKPISSSAFLCEEKIFALAS---SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITA 173 (340)
Q Consensus 98 ~~wd~~~~~~~~~~-~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 173 (340)
..+++.... ...+ .........++++|++..|+.++ +.|.++|+........+.. ......+++. +.+++.+
T Consensus 149 ~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva 224 (267)
T 1npe_A 149 ETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYT 224 (267)
T ss_dssp EEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEE
T ss_pred EEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEE
Confidence 888876433 2222 22334578999999887776644 3499999876533333332 2334566654 4567776
Q ss_pred EcCCCeEEEEEc
Q 036605 174 GYGEKHLQVWRC 185 (340)
Q Consensus 174 ~~~d~~i~iwd~ 185 (340)
....+.|.++|.
T Consensus 225 ~~~~~~v~~~d~ 236 (267)
T 1npe_A 225 DWKTNSVIAMDL 236 (267)
T ss_dssp ETTTTEEEEEET
T ss_pred ECCCCeEEEEeC
Confidence 765789999987
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.51 E-value=3e-05 Score=68.29 Aligned_cols=151 Identities=8% Similarity=-0.015 Sum_probs=98.6
Q ss_pred CeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC-C----c
Q 036605 23 SYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN-G----M 96 (340)
Q Consensus 23 ~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-g----~ 96 (340)
....|+|+| ++. .|+++...+.|+.+|+..+....... .......++|+++++.|+.+... + .
T Consensus 138 ~P~~lavdp~~~g---------~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 138 GAVWLSFDPKNHN---------HLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CCCEEEEETTEEE---------EEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CCCEEEECCCCCC---------eEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccce
Confidence 456889998 444 35555444889999998776443333 44568999999999977777652 1 3
Q ss_pred EEEEeCCCCeEE--EEeecCCCCeeEEEEcc-CCCEEEE--ecCcEEEEECCCCceeEEeec-CCCCeEEEEECCCCCEE
Q 036605 97 ASEMKSEMGEVI--REFKASEKPISSSAFLC-EEKIFAL--ASSEVRILSLENGEEVLKFSD-DVGPLQYVSASDGAKII 170 (340)
Q Consensus 97 i~~wd~~~~~~~--~~~~~~~~~i~~l~~~~-~~~~l~~--~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l 170 (340)
+.+++. .+... ..+.. ......++++| ++.++++ ..+.|..++...+.....+.. .......++|+|++++|
T Consensus 207 v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 207 NYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp EEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred EEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 444443 23211 22222 23457889999 6666655 334599999987654222221 22456789999999977
Q ss_pred EEEEcCCCeEEEEEcc
Q 036605 171 ITAGYGEKHLQVWRCD 186 (340)
Q Consensus 171 ~s~~~~d~~i~iwd~~ 186 (340)
+.+....+.|..++.+
T Consensus 285 yv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred EEEECCCCEEEEEeCC
Confidence 7777768899999875
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=1e-05 Score=76.63 Aligned_cols=149 Identities=12% Similarity=0.054 Sum_probs=91.5
Q ss_pred CeEEEEee-ccccccccccCceEEEEEcC-CC----cEEEEEccCC-eeEE-EecCCCCCCeEEEEEecCCCEEEEEeCC
Q 036605 23 SYSCLACG-FVGKKRRKERGTLLLALGTS-NG----DILAVDVLTG-EMKW-KSTGRHPGGLAGLAFAKKGRSLHVVGTN 94 (340)
Q Consensus 23 ~v~~l~~s-p~~~~~~~~~~~~~l~~g~~-dg----~i~i~d~~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~d 94 (340)
.+...+|| |||+ +||.+.. +| .|+++|+.++ +.+. .+. .....++|+|||+.|+....|
T Consensus 175 ~~~~~~~S~PDG~---------~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHD---------LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTC---------EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCCCCC---------EEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEEC
Confidence 67889999 9998 7775443 23 4999999998 6321 111 123468899999888777655
Q ss_pred -----CcEEEEeCCCCeE--EEEeec-CCCCeeEEEEccCCCEEEEec-----CcEEEEECCCCc-ee--EEe-ecCCCC
Q 036605 95 -----GMASEMKSEMGEV--IREFKA-SEKPISSSAFLCEEKIFALAS-----SEVRILSLENGE-EV--LKF-SDDVGP 157 (340)
Q Consensus 95 -----g~i~~wd~~~~~~--~~~~~~-~~~~i~~l~~~~~~~~l~~~~-----~~i~i~d~~~~~-~~--~~~-~~~~~~ 157 (340)
..|.++++.++.. ...+.. .......+.|+|||++|+... ..|+++|+.++. .. ..+ ......
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 2688888877641 222322 223456789999999887622 129999998762 22 333 233345
Q ss_pred eEEEEECCCCCEEEEEEcCC--C--eEEEEEc
Q 036605 158 LQYVSASDGAKIIITAGYGE--K--HLQVWRC 185 (340)
Q Consensus 158 v~~~~~s~~~~~l~s~~~~d--~--~i~iwd~ 185 (340)
..++.|+. |..|+..+..+ + .|..+++
T Consensus 322 ~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 322 RYDVQMHG-TSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp CEEEEEET-TTEEEEEECTTTCTTCEEEEEET
T ss_pred eEEEeeee-CCEEEEEeCCCCCCCcEEEEEcC
Confidence 55555544 44544444433 3 4555554
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.45 E-value=4e-05 Score=70.23 Aligned_cols=109 Identities=18% Similarity=0.189 Sum_probs=71.8
Q ss_pred EEEEEc------CCCcEEEEEccCCeeEEEecCCCCC------------------------------------Ce-EEEE
Q 036605 44 LLALGT------SNGDILAVDVLTGEMKWKSTGRHPG------------------------------------GL-AGLA 80 (340)
Q Consensus 44 ~l~~g~------~dg~i~i~d~~~~~~~~~~~~~h~~------------------------------------~v-~~v~ 80 (340)
.+++++ .+|.|+.+|..+|+.++++...... .+ ..++
T Consensus 168 ~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a 247 (599)
T 1w6s_A 168 KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYA 247 (599)
T ss_dssp EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCcccccee
Confidence 355555 3899999999999999987641110 00 1346
Q ss_pred EecCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEeecCCCC------e---eEEEEc-cCC---CEEE
Q 036605 81 FAKKGRSLHVVGTN----------------GMASEMKSEMGEVIREFKASEKP------I---SSSAFL-CEE---KIFA 131 (340)
Q Consensus 81 ~~~~~~~l~s~~~d----------------g~i~~wd~~~~~~~~~~~~~~~~------i---~~l~~~-~~~---~~l~ 131 (340)
+.++...++.+..+ +.|..+|..+|+.+..+...... . .-+... .+| ..++
T Consensus 248 ~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~ 327 (599)
T 1w6s_A 248 YDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLT 327 (599)
T ss_dssp EETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEE
T ss_pred EeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEE
Confidence 66777788887665 37999999999998877643221 1 112222 467 3455
Q ss_pred EecC--cEEEEECCCCceeEEee
Q 036605 132 LASS--EVRILSLENGEEVLKFS 152 (340)
Q Consensus 132 ~~~~--~i~i~d~~~~~~~~~~~ 152 (340)
.++. .++++|..+|+.+..+.
T Consensus 328 ~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 328 HPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EECTTSEEEEEETTTCCEEEEEE
T ss_pred EECCCcEEEEEECCCCCEeeccc
Confidence 4444 49999999998876553
No 261
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.45 E-value=0.001 Score=62.91 Aligned_cols=215 Identities=7% Similarity=-0.055 Sum_probs=127.3
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCC----eeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCC
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTG----EMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNG 95 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg 95 (340)
..+..|+|.+.. + ++++-...+.|+.+++... .....+.. .......|++.+.++.||.+. ..+
T Consensus 424 ~~~~gl~~d~~~~~---------lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~~~~~LY~tD~~~~ 493 (791)
T 3m0c_C 424 RNVVALDTEVASNR---------IYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLG 493 (791)
T ss_dssp SSEEEEEEETTTTE---------EEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CceEEEeecccCCe---------eEEeeccceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeeecCCcEEEEecCCC
Confidence 456678888754 5 5566666788888887652 22223332 344667899998887777665 458
Q ss_pred cEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEE
Q 036605 96 MASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIII 171 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 171 (340)
.|.+.++........+...-.....|++.|.+..|+.++ ..|...++........+.........|++++.+..|+
T Consensus 494 ~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 494 TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEE
Confidence 999999886554444444445678999999866665543 3488888865543333333346788999998888888
Q ss_pred EEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccCC-----CCC
Q 036605 172 TAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDEK-----TNP 246 (340)
Q Consensus 172 s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~~-----~~p 246 (340)
.+....+.|..++++ .. ....+.......+..+.+ .. ..+.++++-...+.|...+..+++.... ..|
T Consensus 574 waD~~~~~I~~~d~d--G~-~~~~v~~~~~~l~~P~gl--av--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P 646 (791)
T 3m0c_C 574 WVDSKLHSISSIDVN--GG-NRKTILEDEKRLAHPFSL--AV--FEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSP 646 (791)
T ss_dssp EEETTTTEEEEEETT--SC-SCEEEEECTTTTSSEEEE--EE--ETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCC
T ss_pred EEeCCCCcEEEEecC--CC-ceEEEecCCCccCCCCEE--EE--eCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCc
Confidence 877767788888873 22 111111100111122222 11 1223444445567788888666544332 235
Q ss_pred ceEEEee
Q 036605 247 AKITVKL 253 (340)
Q Consensus 247 ~~i~~~~ 253 (340)
..|.+..
T Consensus 647 ~~i~v~h 653 (791)
T 3m0c_C 647 EDMVLFH 653 (791)
T ss_dssp CCEEEES
T ss_pred eeEeeec
Confidence 5555543
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.44 E-value=0.00023 Score=59.93 Aligned_cols=198 Identities=9% Similarity=-0.025 Sum_probs=120.8
Q ss_pred CeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCee-EEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q 036605 23 SYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEM-KWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASE 99 (340)
Q Consensus 23 ~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~ 99 (340)
....++|.+.+ + ++.+-...+.|..++...+.. ...+.. .-.....+++.+.+..|+.+. ..+.|.+
T Consensus 36 ~~~~ld~d~~~~~---------lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~ 105 (318)
T 3sov_A 36 DAAAVDFVFSHGL---------IYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEV 105 (318)
T ss_dssp EEEEEEEEGGGTE---------EEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccEEEEEEeCCCE---------EEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEE
Confidence 45688998865 5 666667788999999876632 112222 223567899987666666554 5578999
Q ss_pred EeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 100 MKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 100 wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
+++........+.........+++.|.+..++.++ ..|..+++........+...-.....+++++++..|+.+..
T Consensus 106 ~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 106 SNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEEC
Confidence 99875443333333445678999999766665543 23888887643222222223356689999998888888777
Q ss_pred CCCeEEEEEccCCCCCccCCcee-eecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 176 GEKHLQVWRCDISSKTVNKGPAL-SMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
..+.|..++++ ... ...+.. .+.+ +.-+.+ . .+..+.+-...+.|..++..+++.
T Consensus 186 ~~~~I~~~d~d--G~~-~~~~~~~~~~~-P~glav-----~-~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 186 KLNFIHKSNLD--GTN-RQAVVKGSLPH-PFALTL-----F-EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp TTTEEEEEETT--SCS-CEEEECSCCSC-EEEEEE-----E-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCEEEEEcCC--CCc-eEEEecCCCCC-ceEEEE-----e-CCEEEEEecCCCeEEEEECCCCCc
Confidence 67899999984 211 111110 1111 222222 2 234455556678899998876554
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.38 E-value=0.00058 Score=58.30 Aligned_cols=183 Identities=11% Similarity=0.038 Sum_probs=110.5
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSA 122 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~ 122 (340)
+|+.+. ...|+..++........+. ....+..++|++.+..|+.+. ..+.|..+++..+.....+.........++
T Consensus 46 ~ll~~~-~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gla 122 (349)
T 3v64_C 46 VLLFAN-RIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLA 122 (349)
T ss_dssp EEEEEC-BSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred eeEeec-ccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEE
Confidence 344443 4568888887665444444 334688999998777777665 458899999887654333333334567899
Q ss_pred EccCCCEEEEec---CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCC-CeEEEEEccCCCCCccCCcee
Q 036605 123 FLCEEKIFALAS---SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGE-KHLQVWRCDISSKTVNKGPAL 198 (340)
Q Consensus 123 ~~~~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d-~~i~iwd~~~~~~~~~~~~~~ 198 (340)
+.+.+..|+.++ +.|.+.++........+.........++++|.+.+|+.+.... +.|..++++ ... ...+..
T Consensus 123 vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~-~~~~~~ 199 (349)
T 3v64_C 123 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSG-RRIIAD 199 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCS-CEESCC
T ss_pred EecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCC-cEEEEE
Confidence 998666665533 3499999875533333333345678999999777777766645 778888873 211 111110
Q ss_pred eecCCCeeeeeecCCCCCCC-CEEEEEeCCCcEEEEECCC
Q 036605 199 SMRHSPVAIDCKNSPNGEDG-TVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~-~~l~~~s~dg~i~vwd~~~ 237 (340)
.-...+.-+.+ ++++ ...++-+..+.|..+++..
T Consensus 200 ~~~~~PnGla~-----d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 200 THLFWPNGLTI-----DYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp SSCSCEEEEEE-----ETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCCcceEEE-----eCCCCEEEEEECCCCEEEEEeCCC
Confidence 00111222333 4444 4445555567899898764
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.33 E-value=0.00022 Score=60.09 Aligned_cols=195 Identities=8% Similarity=-0.024 Sum_probs=109.2
Q ss_pred CeEEEEeec-cccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC----CCCCCeEEEEEec-CCCEEEEEeC---
Q 036605 23 SYSCLACGF-VGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG----RHPGGLAGLAFAK-KGRSLHVVGT--- 93 (340)
Q Consensus 23 ~v~~l~~sp-~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~----~h~~~v~~v~~~~-~~~~l~s~~~--- 93 (340)
....+++.+ +++ |+++...+.|..+|..++... .+.. ........+++.+ +|+..++-..
T Consensus 81 ~p~gi~~~~~~g~----------l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 81 RTYDISYNLQNNQ----------LYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp CEEEEEEETTTTE----------EEEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSC
T ss_pred CCceEEEcCCCCc----------EEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccc
Confidence 467889987 666 455544455888887765422 2211 0123578899999 8876655322
Q ss_pred --------------CCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec---CcEEEEECCCCc--eeEEeecC
Q 036605 94 --------------NGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS---SEVRILSLENGE--EVLKFSDD 154 (340)
Q Consensus 94 --------------dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~~~--~~~~~~~~ 154 (340)
++.|..||..+++....... ......|+++|+++.|+.++ +.|..|++.... ....+...
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~ 228 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI 228 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC
Confidence 36799999887765433222 23457899999998765542 449999987531 12222222
Q ss_pred CCCeEEEEECCCCCEEEEEEcC---------CCeEEEEEccCCCCCccCCceeeecC-CCeeeeeecCCCCCCCCEEEEE
Q 036605 155 VGPLQYVSASDGAKIIITAGYG---------EKHLQVWRCDISSKTVNKGPALSMRH-SPVAIDCKNSPNGEDGTVILAV 224 (340)
Q Consensus 155 ~~~v~~~~~s~~~~~l~s~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 224 (340)
.+ ...++++++|.+.++.... .+.|..+|. .++....+...-+. ......+ .+ .++..+++.
T Consensus 229 ~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~---~G~~~~~~~~~~g~~~~~~~~~--~~--~~g~L~v~~ 300 (322)
T 2fp8_A 229 PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE---FGNILEVIPLPPPFAGEHFEQI--QE--HDGLLYIGT 300 (322)
T ss_dssp SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT---TSCEEEEEECCTTTTTSCCCEE--EE--ETTEEEEEC
T ss_pred CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC---CCCEEEEEECCCCCccccceEE--EE--eCCEEEEee
Confidence 33 7889999999866553320 245666663 33332222211000 0111111 11 345555555
Q ss_pred eCCCcEEEEECCC
Q 036605 225 AESGVAYSWDLKT 237 (340)
Q Consensus 225 s~dg~i~vwd~~~ 237 (340)
...+.|..+++..
T Consensus 301 ~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 301 LFHGSVGILVYDK 313 (322)
T ss_dssp SSCSEEEEEEC--
T ss_pred cCCCceEEEeccc
Confidence 5667788887653
No 265
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.32 E-value=1.6e-05 Score=74.23 Aligned_cols=185 Identities=14% Similarity=0.180 Sum_probs=116.5
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCC----------e-EEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGG----------L-AGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFK 112 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~----------v-~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 112 (340)
.+++++.++.|+.+|..+|+.++++.. .... + ..+++ .+..++.++.|+.|..+|..+|+.+..+.
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKELWRYDP-EVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECC-CCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEECCCChhceEECC-CCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 577788899999999999999999864 2110 1 12233 25678888999999999999999988876
Q ss_pred cCC----CCeeE-EEEccCCCEEEEe-------cCcEEEEECCCCceeEEeecCC---C---------------------
Q 036605 113 ASE----KPISS-SAFLCEEKIFALA-------SSEVRILSLENGEEVLKFSDDV---G--------------------- 156 (340)
Q Consensus 113 ~~~----~~i~~-l~~~~~~~~l~~~-------~~~i~i~d~~~~~~~~~~~~~~---~--------------------- 156 (340)
... ..+.+ ..+ .++..++.. ++.|+.+|..+|+.+-.+.... .
T Consensus 145 ~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp CSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred cCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 431 11111 111 144444332 2459999999999887664211 0
Q ss_pred -------CeEEEEECCCCCEEEEEEcCCC-------------------eEEEEEccCCCCCccCCceeeecCC-------
Q 036605 157 -------PLQYVSASDGAKIIITAGYGEK-------------------HLQVWRCDISSKTVNKGPALSMRHS------- 203 (340)
Q Consensus 157 -------~v~~~~~s~~~~~l~s~~~~d~-------------------~i~iwd~~~~~~~~~~~~~~~~~~~------- 203 (340)
....++++++...++.+.. ++ .|..+|. .+++..-..... .+.
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~-~g~~w~~~~~~~~~gd~l~~~~v~AlD~--~tG~~~W~~~~~-~~~~wd~~~~ 299 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTG-NGSPWNREVRSPGGGDNLYLSSILAIRP--DTGKLAWHYQVT-PGDSWDFTAT 299 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECC-CEESSCHHHHSTTCCCCTTTTEEEEECT--TTCCEEEEEESS-TTCCSCCCCC
T ss_pred eeCCCCccccceEEcCCCCEEEEeCC-CCCccccCCCCCCCCCceeeeeEEEEcC--CCCceeeEeecC-CCccccccCC
Confidence 1124678887777777554 44 3777776 455433222210 111
Q ss_pred --CeeeeeecCCCCCCCC---EEEEEeCCCcEEEEECCCCCcc
Q 036605 204 --PVAIDCKNSPNGEDGT---VILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 204 --~~~~~~~~~~~~~~~~---~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
+...++ ..+|. .++.++.+|.++++|..+++.+
T Consensus 300 ~~~~~~d~-----~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 300 QQITLAEL-----NIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp SCEEEEEE-----EETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCcEEEEe-----ccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 111222 12443 6888999999999999998876
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.29 E-value=0.00028 Score=62.15 Aligned_cols=150 Identities=11% Similarity=0.007 Sum_probs=94.5
Q ss_pred CeEEEEeecc---ccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCC----
Q 036605 23 SYSCLACGFV---GKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNG---- 95 (340)
Q Consensus 23 ~v~~l~~sp~---~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg---- 95 (340)
....++|+|+ +. |+++...+.|+.+|..++.... +.. ......+++|+++|+ |+.+...+
T Consensus 140 ~P~gvavd~~s~~g~----------Lyv~D~~~~I~~id~~~g~v~~-~~~-~~~~P~giavd~dG~-lyVad~~~~~~~ 206 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDD----------LYWVGQRDAFRHVDFVNQYVDI-KTT-NIGQCADVNFTLNGD-MVVVDDQSSDTN 206 (433)
T ss_dssp CCCEEEECTTTTTCE----------EEEECBTSCEEEEETTTTEEEE-ECC-CCSCEEEEEECTTCC-EEEEECCSCTTS
T ss_pred CCceEEEccccCCCE----------EEEEeCCCCEEEEECCCCEEEE-eec-CCCCccEEEECCCCC-EEEEcCCCCccc
Confidence 4568999985 45 5555444899999998887554 433 445689999999999 66555422
Q ss_pred -cEEEEeCCCCeE-EEEeecCCCCeeEEEEcc-CCCEEEEe--cCcEEEEECCCCceeEEe-ec-CCCCeEEEEECCCCC
Q 036605 96 -MASEMKSEMGEV-IREFKASEKPISSSAFLC-EEKIFALA--SSEVRILSLENGEEVLKF-SD-DVGPLQYVSASDGAK 168 (340)
Q Consensus 96 -~i~~wd~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~l~~~--~~~i~i~d~~~~~~~~~~-~~-~~~~v~~~~~s~~~~ 168 (340)
.+...+...+.. ...+. .......++++| ++.++++. .+.|+.+|..++.....+ .. .......++|+|++.
T Consensus 207 ~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 207 TGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp EEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred ceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 233333322211 01121 223457788999 66655552 334999998877652222 21 122334699999999
Q ss_pred EEEEEEcCCCeEEEEEcc
Q 036605 169 IIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 169 ~l~s~~~~d~~i~iwd~~ 186 (340)
+|+.+....+.|..++++
T Consensus 286 ~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEEETTTTEEEEEEBC
T ss_pred EEEEEeCCCCEEEEEeCC
Confidence 777777767899998874
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.27 E-value=0.00096 Score=56.07 Aligned_cols=183 Identities=7% Similarity=-0.046 Sum_probs=107.3
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEeCCC---CeEEEE-eecCCCCe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-NGMASEMKSEM---GEVIRE-FKASEKPI 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~wd~~~---~~~~~~-~~~~~~~i 118 (340)
+|+.+. ...|+..|+.+.+....+. ......+++|++.+..|+.+.. .+.|..+++.. +..... +...-...
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 444444 3569999998876555444 3456889999997777776654 58999999875 122222 32223456
Q ss_pred eEEEEccCCCEEEEe---cCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCC-CeEEEEEccCCCCCccC
Q 036605 119 SSSAFLCEEKIFALA---SSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGE-KHLQVWRCDISSKTVNK 194 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~---~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d-~~i~iwd~~~~~~~~~~ 194 (340)
..+++.+.+..|+.+ .+.|.++++........+.........++++|.+.+|+.+.... +.|..++++ +....
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d---G~~~~ 156 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN---GVDIY 156 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT---SCCEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC---CCCeE
Confidence 889999766655543 23499999875433322333345678999999777777666533 678777763 22111
Q ss_pred CceeeecCCCeeeeeecCCCCCCCCEE-EEEeCCCcEEEEECCC
Q 036605 195 GPALSMRHSPVAIDCKNSPNGEDGTVI-LAVAESGVAYSWDLKT 237 (340)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~s~dg~i~vwd~~~ 237 (340)
.+....-..+.-+.+ ++++..| ++-+..+.|..+|+..
T Consensus 157 ~~~~~~~~~P~gla~-----d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 157 SLVTENIQWPNGITL-----DLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEECSSCSCEEEEEE-----ETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEECCCCCceEEEE-----eccCCEEEEEECCCCeEEEEecCC
Confidence 111000111222233 4444444 4445567899999864
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.26 E-value=0.00016 Score=68.55 Aligned_cols=151 Identities=9% Similarity=0.007 Sum_probs=86.9
Q ss_pred EEEEeeccccccccccCceEEEEEcCC-----CcEEEEEccCCee--EEEecCCCCCCeEEEEEecCCCEEEEEeC---C
Q 036605 25 SCLACGFVGKKRRKERGTLLLALGTSN-----GDILAVDVLTGEM--KWKSTGRHPGGLAGLAFAKKGRSLHVVGT---N 94 (340)
Q Consensus 25 ~~l~~sp~~~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d 94 (340)
..++|+||++ .|+....+ ..|+++++.++.. ...+..........+.|+|||++|+..+. .
T Consensus 224 ~~~~WspDg~---------~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 294 (751)
T 2xe4_A 224 GEIVWGPDHT---------SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPET 294 (751)
T ss_dssp SCCEECSSTT---------EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSC
T ss_pred eeEEEecCCC---------EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCC
Confidence 4688999997 56665554 3688888877641 22333223345678899999998877653 3
Q ss_pred CcEEEEeCCCC--eE--EEEeecCCCCeeEEEEccCCCEEEEecC------cEEEEECCCCceeEE-eecCCCC--eEEE
Q 036605 95 GMASEMKSEMG--EV--IREFKASEKPISSSAFLCEEKIFALASS------EVRILSLENGEEVLK-FSDDVGP--LQYV 161 (340)
Q Consensus 95 g~i~~wd~~~~--~~--~~~~~~~~~~i~~l~~~~~~~~l~~~~~------~i~i~d~~~~~~~~~-~~~~~~~--v~~~ 161 (340)
..|.++|+.++ .. ............++.|+..+.+++..+. .|..+|+.++..... +..+... +..+
T Consensus 295 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~ 374 (751)
T 2xe4_A 295 AEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESI 374 (751)
T ss_dssp EEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEE
T ss_pred ceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEE
Confidence 46888898875 22 2222333344555555444444444322 277788765322233 3334433 3444
Q ss_pred EECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 162 SASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 162 ~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
.+ .+.+|+.....++..++|-++
T Consensus 375 ~~--~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 375 AV--RSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EE--CSSEEEEEEEETTEEEEEEEE
T ss_pred EE--ECCEEEEEEEeCCEEEEEEEe
Confidence 44 455666555557776666553
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.23 E-value=0.00044 Score=59.96 Aligned_cols=183 Identities=11% Similarity=0.024 Sum_probs=110.1
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCCeeEEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASEMKSEMGEVIREFKASEKPISSSA 122 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~ 122 (340)
+|+.+ ....|+.+++..+.....+. ....+..++|++.+..|+.+. ..+.|..+++..+.....+.........++
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gla 165 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLA 165 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEE
T ss_pred eeEee-cCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEE
Confidence 44444 34578888887766544444 334688999998777777665 458899999887654444433334567899
Q ss_pred EccCCCEEEEec---CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCC-CeEEEEEccCCCCCccCCcee
Q 036605 123 FLCEEKIFALAS---SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGE-KHLQVWRCDISSKTVNKGPAL 198 (340)
Q Consensus 123 ~~~~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d-~~i~iwd~~~~~~~~~~~~~~ 198 (340)
+.+.+..|+.++ +.|.++++........+.........++++|.+.+|+.+.... +.|..++++ . .....+..
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G-~~~~~~~~ 242 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--G-SGRRIIAD 242 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--S-CSCEEEEC
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC--C-CCcEEEEE
Confidence 998766665533 3388888765433333333345678999999877777766645 677777763 2 11111110
Q ss_pred eecCCCeeeeeecCCCCCC-CCEEEEEeCCCcEEEEECCC
Q 036605 199 SMRHSPVAIDCKNSPNGED-GTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~-~~~l~~~s~dg~i~vwd~~~ 237 (340)
.....+.-+.+ +++ +..+++-+..+.|..+++..
T Consensus 243 ~~~~~PnGlav-----d~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 243 THLFWPNGLTI-----DYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SSCSCEEEEEE-----EGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCCeeeEEE-----eCCCCEEEEEECCCCEEEEEeCCC
Confidence 00111222223 443 34444555567788888764
No 270
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.22 E-value=1.2e-05 Score=75.25 Aligned_cols=203 Identities=9% Similarity=-0.032 Sum_probs=113.3
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccC----CeeEEEecCCCCCCeEEEEEecCCCEEEEE-eCCCcE
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLT----GEMKWKSTGRHPGGLAGLAFAKKGRSLHVV-GTNGMA 97 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~dg~i 97 (340)
.+..|+|.+.+. .++++-...+.|+.+++.. ......+.. .......|++.+.+..||.+ ...+.|
T Consensus 407 ~p~gla~d~~~~--------~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~~~~~I 477 (699)
T 1n7d_A 407 NVVALDTEVASN--------RIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTV 477 (699)
T ss_dssp TCCCCEEETTTT--------EEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCTTTSCE
T ss_pred ceEEEccccccC--------eEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEeccCCeE
Confidence 456788888664 0444445668899999875 222212211 12235678887655555554 346889
Q ss_pred EEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEE
Q 036605 98 SEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITA 173 (340)
Q Consensus 98 ~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 173 (340)
.++++........+.........|++.|.+.+|+.++ +.|..+++........+.........|+|++++..|+.+
T Consensus 478 ~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 478 SVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp EEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred EEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEE
Confidence 9999876554443433334567899999766655533 347777765432211122223456789999987777776
Q ss_pred EcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCcc
Q 036605 174 GYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
....+.|.+++++......+......+.+ +..+.+ ..+ .++++....+.|..++..+++.+
T Consensus 558 D~~~~~I~~~d~dG~~~~~~~~~~~~~~~-P~glav-----d~~-~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 558 DSKLHSISSIDVNGGNRKTILEDEKRLAH-PFSLAV-----FED-KVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp ETTTTEEEEECSSSSCCEEECCCSSSCSS-CCCCEE-----ETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred ecCCCeEEEEccCCCceEEEEecCCcCCC-ceEeEE-----ECC-EEEEEeCCCCeEEEEEccCCCce
Confidence 76678899998742111111000000111 112222 122 34444456678999987665443
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.22 E-value=8.1e-05 Score=68.22 Aligned_cols=191 Identities=13% Similarity=0.191 Sum_probs=115.7
Q ss_pred EEEEEcC-CCcEEEEEc-cCCeeEEEecCCCCC----------CeEEEEEecCCCE----EEEEeCCCcEEEEeCCCCeE
Q 036605 44 LLALGTS-NGDILAVDV-LTGEMKWKSTGRHPG----------GLAGLAFAKKGRS----LHVVGTNGMASEMKSEMGEV 107 (340)
Q Consensus 44 ~l~~g~~-dg~i~i~d~-~~~~~~~~~~~~h~~----------~v~~v~~~~~~~~----l~s~~~dg~i~~wd~~~~~~ 107 (340)
.|++++. ++.|+.+|. .+|+.++++...... ....+++.|.+.. |+.++.|+.|..+|..+|+.
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 4677777 899999999 999999988651110 0123555444444 88889999999999999999
Q ss_pred EEEeecCCC----Cee-EEEEccCCCEEEEe-------cCcEEEEECCCCceeEEeecCCCC------------------
Q 036605 108 IREFKASEK----PIS-SSAFLCEEKIFALA-------SSEVRILSLENGEEVLKFSDDVGP------------------ 157 (340)
Q Consensus 108 ~~~~~~~~~----~i~-~l~~~~~~~~l~~~-------~~~i~i~d~~~~~~~~~~~~~~~~------------------ 157 (340)
+........ .+. ...+ .++..++.. ++.|+.+|..+|+.+-++......
T Consensus 144 ~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~ 222 (599)
T 1w6s_A 144 VWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccc
Confidence 877653220 121 1122 245444333 345999999999888666432110
Q ss_pred -------------------e-EEEEECCCCCEEEEEEcCC----------------CeEEEEEccCCCCCccCCceee--
Q 036605 158 -------------------L-QYVSASDGAKIIITAGYGE----------------KHLQVWRCDISSKTVNKGPALS-- 199 (340)
Q Consensus 158 -------------------v-~~~~~s~~~~~l~s~~~~d----------------~~i~iwd~~~~~~~~~~~~~~~-- 199 (340)
+ ..+++.++...++.+.. + +.|..+|. .+++..-.....
T Consensus 223 ~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g-~~~p~~~~~r~gd~~y~~sv~Ald~--~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG-NPAPWNETMRPGDNKWTMTIFGRDA--DTGEAKFGYQKTPH 299 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC-CCSCSCGGGSCSCCTTSSEEEEEET--TTCCEEEEEESSTT
T ss_pred cccccccCCCcceecCCCccccceeEeCCCCEEEEeCC-CCccccCcccCCCccccceEEEEeC--CCCceeeEeecCCC
Confidence 0 13455566666666444 3 36777776 455443221110
Q ss_pred ------ecCCCeeeeeecCCCCCCC---CEEEEEeCCCcEEEEECCCCCccC
Q 036605 200 ------MRHSPVAIDCKNSPNGEDG---TVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 200 ------~~~~~~~~~~~~~~~~~~~---~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
....+...+. . ..+| ..++.++.+|.++++|..+++.+.
T Consensus 300 d~wd~d~~~~p~l~d~--~--~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQ--K--DKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp CSSCCCCCCCCEEEEE--E--CTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccCCCccEEEec--c--ccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 0011222222 0 1356 567778999999999999987654
No 272
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.00043 Score=61.43 Aligned_cols=154 Identities=14% Similarity=0.037 Sum_probs=97.0
Q ss_pred CeEEEEeec-cc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCC--CCCCeEEEEE-------ecCCCEEEEE
Q 036605 23 SYSCLACGF-VG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGR--HPGGLAGLAF-------AKKGRSLHVV 91 (340)
Q Consensus 23 ~v~~l~~sp-~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~--h~~~v~~v~~-------~~~~~~l~s~ 91 (340)
....|+|.| ++ + ++++-...+.|++.|++++.....+... .......++| ++++..|+.+
T Consensus 140 ~p~~la~dp~~~~~---------Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 140 DNGRLAFDPLNKDH---------LYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp SEEEEEEETTEEEE---------EEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCCEEEEccCCCCE---------EEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEE
Confidence 356899998 34 4 4444444577999999888755444331 1235899999 9999978777
Q ss_pred eCCC-------cEEEEeCCC-CeEE-----EEeecCCCCeeEEEEccCCCEEEE---ecCcEEEEECC-------CCce-
Q 036605 92 GTNG-------MASEMKSEM-GEVI-----REFKASEKPISSSAFLCEEKIFAL---ASSEVRILSLE-------NGEE- 147 (340)
Q Consensus 92 ~~dg-------~i~~wd~~~-~~~~-----~~~~~~~~~i~~l~~~~~~~~l~~---~~~~i~i~d~~-------~~~~- 147 (340)
...+ .|.+++... +... ..+... .....++++|++..|+. ..+.|..+|+. ++..
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee
Confidence 6654 266665433 2211 122211 23467889996555544 33349999987 5543
Q ss_pred ----------eEE-ee-cCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 148 ----------VLK-FS-DDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 148 ----------~~~-~~-~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
... +. ........++|+|+|.+|+.+......|+.++.+
T Consensus 290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 112 21 2234567999999999777766667888887764
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.18 E-value=0.00065 Score=57.15 Aligned_cols=174 Identities=16% Similarity=0.216 Sum_probs=109.2
Q ss_pred CccCCCCceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEE-EEcC--CCcEEEEEc--cCCeeEEEecCC----
Q 036605 1 IWSTNDGSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLA-LGTS--NGDILAVDV--LTGEMKWKSTGR---- 71 (340)
Q Consensus 1 vwd~~~g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~-~g~~--dg~i~i~d~--~~~~~~~~~~~~---- 71 (340)
|||+ +|++++.+. . ..+..+..-|+-+- ......+++ +--. +++|.+|++ .++. +..+...
T Consensus 54 Vydl-~G~~l~~~~----~--g~~nnVD~r~~~~l--~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv 123 (355)
T 3amr_A 54 VYSL-DGKMLHSYN----T--GKLNNVDIRYDFPL--NGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPI 123 (355)
T ss_dssp EEET-TSCEEEEEC----C--SCEEEEEEEEEEEE--TTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCE
T ss_pred EEcC-CCcEEEEcc----C--CCcccEEEeccccc--CCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCc
Confidence 4677 777777664 1 45666666553100 000011223 3333 578999976 4443 4444220
Q ss_pred --CCCCeEEEEE--ecC-CC-EEEEEeCCCcEEEEeC-------CCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc--
Q 036605 72 --HPGGLAGLAF--AKK-GR-SLHVVGTNGMASEMKS-------EMGEVIREFKASEKPISSSAFLCEEKIFALASSE-- 136 (340)
Q Consensus 72 --h~~~v~~v~~--~~~-~~-~l~s~~~dg~i~~wd~-------~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~-- 136 (340)
-...+..+|+ +|. +. +++....+|.+..|++ .+.+.+++|... ..+..+.+.+....|+.+..+
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEecccce
Confidence 1156777888 664 43 6888888999999988 234566777654 467888889888888887766
Q ss_pred EEEEECC-----CCceeEEee-cC-CCCeEEEEE--CCCCC-EEEEEEcCCCeEEEEEc
Q 036605 137 VRILSLE-----NGEEVLKFS-DD-VGPLQYVSA--SDGAK-IIITAGYGEKHLQVWRC 185 (340)
Q Consensus 137 i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~--s~~~~-~l~s~~~~d~~i~iwd~ 185 (340)
|+.|+.+ +++.+..+. ++ ...+..|++ .++++ ||++++.+++.+.+||.
T Consensus 203 Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 203 IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 6666654 344444442 22 247888888 55666 88888887899999997
No 274
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.17 E-value=0.0008 Score=61.60 Aligned_cols=108 Identities=22% Similarity=0.233 Sum_probs=70.1
Q ss_pred EEEEEcC------CCcEEEEEccCCeeEEEecCCCCCCe-----------------------------------------
Q 036605 44 LLALGTS------NGDILAVDVLTGEMKWKSTGRHPGGL----------------------------------------- 76 (340)
Q Consensus 44 ~l~~g~~------dg~i~i~d~~~~~~~~~~~~~h~~~v----------------------------------------- 76 (340)
.+++++. +|.|+.+|..+|+.++.... ....+
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~-~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w 248 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF-VEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPW 248 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEES-STTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCC
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCC-CccccccccCcccccccccccccCCCccccccccccccccCCcccc
Confidence 4556553 78999999999998887643 11000
Q ss_pred EEEEEecCCCEEEEEeC--------------------C----CcEEEEeCCCCeEEEEeecCCC------CeeE-EEEc-
Q 036605 77 AGLAFAKKGRSLHVVGT--------------------N----GMASEMKSEMGEVIREFKASEK------PISS-SAFL- 124 (340)
Q Consensus 77 ~~v~~~~~~~~l~s~~~--------------------d----g~i~~wd~~~~~~~~~~~~~~~------~i~~-l~~~- 124 (340)
..++++|+...++.+.. | +.|..+|..+|+.+..++.... .+.. +.+.
T Consensus 249 ~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~ 328 (582)
T 1flg_A 249 QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDY 328 (582)
T ss_dssp SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEE
T ss_pred CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEee
Confidence 23566777778887663 2 5899999999999888753211 1111 1122
Q ss_pred --cCCC---EEEEecC--cEEEEECCCCceeEEee
Q 036605 125 --CEEK---IFALASS--EVRILSLENGEEVLKFS 152 (340)
Q Consensus 125 --~~~~---~l~~~~~--~i~i~d~~~~~~~~~~~ 152 (340)
.+|+ .++.++. .++++|..+|+.+..+.
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 4664 4555544 49999999998876553
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.16 E-value=5e-05 Score=70.81 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=51.1
Q ss_pred CCeEEEEeeccccccccccCceEEEEEc-CCCcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEe-CC----
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGT-SNGDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVG-TN---- 94 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~-~d---- 94 (340)
..+.++++.++++ ++++|+ .+..+.+||..+.+.... ...+...- .+++..++++.++.|+ .+
T Consensus 243 ~~~~~~~~~~~g~---------lyv~GG~~~~~v~~yd~~t~~W~~~-~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 243 MFCPGISMDGNGQ---------IVVTGGNDAKKTSLYDSSSDSWIPG-PDMQVARGYQSSATMSDGRVFTIGGSWSGGVF 312 (656)
T ss_dssp CSSCEEEECTTSC---------EEEECSSSTTCEEEEEGGGTEEEEC-CCCSSCCSSCEEEECTTSCEEEECCCCCSSSC
T ss_pred CccccccCCCCCC---------EEEeCCCCCCceEEecCcCCceeEC-CCCCccccccceEEecCCeEEEEeCcccCCcc
Confidence 3444567778888 888887 456899999998764432 22122222 3455667899888888 34
Q ss_pred -CcEEEEeCCCCeE
Q 036605 95 -GMASEMKSEMGEV 107 (340)
Q Consensus 95 -g~i~~wd~~~~~~ 107 (340)
..+.+||+.+..-
T Consensus 313 ~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 313 EKNGEVYSPSSKTW 326 (656)
T ss_dssp CCCEEEEETTTTEE
T ss_pred cccceEeCCCCCcc
Confidence 4689999987763
No 276
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.13 E-value=0.0016 Score=62.08 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=106.3
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC-------CCCCCeEEEEEecCCCEEEEEeC
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG-------RHPGGLAGLAFAKKGRSLHVVGT 93 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~~~ 93 (340)
...|.++...++|. |-+|+.++-|..|+..++....-... .....|.+++..+++..|..|+.
T Consensus 356 ~~~V~~i~~d~~g~----------lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~ 425 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN----------LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH 425 (795)
T ss_dssp CSSEEEEEECTTSC----------EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET
T ss_pred CCeeEEEEECCCCC----------EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC
Confidence 35688888888888 77788887899999887764432211 12357899999888875777888
Q ss_pred CCcEEEEeCCCCeEEEEee----cCCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeec-------CCCCeEEEE
Q 036605 94 NGMASEMKSEMGEVIREFK----ASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSD-------DVGPLQYVS 162 (340)
Q Consensus 94 dg~i~~wd~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~ 162 (340)
++-|..||..+++...... .....|.++...++|.+.+....-+.+||..+++.. .+.. ....|.++.
T Consensus 426 ~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~ 504 (795)
T 4a2l_A 426 AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLF 504 (795)
T ss_dssp TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEE
T ss_pred cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEE-EccccccccccCCceEEEEE
Confidence 7789999998876543221 124568899999989877766556999998876432 2221 235788999
Q ss_pred ECCCCCEEEEEEcCCCeEEEEEc
Q 036605 163 ASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 163 ~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
..++|...+. .. +-|..|+.
T Consensus 505 ~d~~g~lWig-t~--~Gl~~~~~ 524 (795)
T 4a2l_A 505 RDSHKRLWIG-GE--EGLSVFKQ 524 (795)
T ss_dssp ECTTCCEEEE-ES--SCEEEEEE
T ss_pred ECCCCCEEEE-eC--CceEEEeC
Confidence 9988875554 33 45777886
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.06 E-value=0.00087 Score=55.98 Aligned_cols=151 Identities=10% Similarity=-0.071 Sum_probs=88.9
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCC--CcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSN--GDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d--g~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
.....+++.++++ ++++.... ..|..++..+++...............++..+++..+++-..++.|.+
T Consensus 72 ~~p~gia~~~dG~---------l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~ 142 (306)
T 2p4o_A 72 GKVSGLAFTSNGD---------LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWL 142 (306)
T ss_dssp SEEEEEEECTTSC---------EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEE
T ss_pred CCceeEEEcCCCc---------EEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEE
Confidence 4577899999998 66555433 247778877877543222112233456665554443444335789999
Q ss_pred EeCCCCeE-EEEee---------cCCCCeeEEEEccCCCEEEEec---CcEEEEECCC-Cce--eEEeecCCCCeEEEEE
Q 036605 100 MKSEMGEV-IREFK---------ASEKPISSSAFLCEEKIFALAS---SEVRILSLEN-GEE--VLKFSDDVGPLQYVSA 163 (340)
Q Consensus 100 wd~~~~~~-~~~~~---------~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~ 163 (340)
+|..++.. +.... ..-.....+ +|++..|+.++ +.|..|++.. ++. ...+.. ......+++
T Consensus 143 ~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~v 219 (306)
T 2p4o_A 143 IDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAF 219 (306)
T ss_dssp EETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEE
T ss_pred EeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEE
Confidence 99876532 21111 011234455 88888776644 3499999864 321 122211 134567899
Q ss_pred CCCCCEEEEEEcCCCeEEEEEc
Q 036605 164 SDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 164 s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
+++|..+++ ....+.|.+++.
T Consensus 220 d~dG~l~va-~~~~~~V~~~~~ 240 (306)
T 2p4o_A 220 DVEGNLYGA-THIYNSVVRIAP 240 (306)
T ss_dssp BTTCCEEEE-CBTTCCEEEECT
T ss_pred CCCCCEEEE-eCCCCeEEEECC
Confidence 999976555 444788999885
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.06 E-value=0.0033 Score=54.70 Aligned_cols=183 Identities=7% Similarity=-0.041 Sum_probs=109.5
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCC----eEEEEeecCCCCe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASEMKSEMG----EVIREFKASEKPI 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~wd~~~~----~~~~~~~~~~~~i 118 (340)
+|+.+ ....|+..++........+. ....+..++|++.+..|+.+. ..+.|..+++... .....+.......
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 44444 34689999988776544443 456789999999777777765 4578999988652 2222333344567
Q ss_pred eEEEEccCCCEEEEec---CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcC-CCeEEEEEccCCCCCccC
Q 036605 119 SSSAFLCEEKIFALAS---SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYG-EKHLQVWRCDISSKTVNK 194 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~-d~~i~iwd~~~~~~~~~~ 194 (340)
..+++.+.+..|+.++ +.|.+.++........+.........++++|.+.+|+.+... .+.|...+++ . ....
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G-~~~~ 238 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--G-VDIY 238 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT--S-CSCE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC--C-CccE
Confidence 8899998666665543 339999987664443444344567899999977777775543 3677777763 2 2111
Q ss_pred CceeeecCCCeeeeeecCCCCCCCCEEEE-EeCCCcEEEEECCC
Q 036605 195 GPALSMRHSPVAIDCKNSPNGEDGTVILA-VAESGVAYSWDLKT 237 (340)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~s~dg~i~vwd~~~ 237 (340)
.+....-..+.-+.+ ++++..|+. -+..+.|..+|+..
T Consensus 239 ~~~~~~l~~P~glav-----d~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 239 SLVTENIQWPNGITL-----DLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEECSSCSCEEEEEE-----ETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEECCCCceEEEEE-----EeCCCEEEEEECCCCEEEEEeCCC
Confidence 111000012222333 444444544 45567788888764
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.03 E-value=0.0043 Score=57.22 Aligned_cols=202 Identities=10% Similarity=-0.046 Sum_probs=117.9
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCee-EEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEM-KWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~ 99 (340)
.....++|++.+. .++.+-...+.|..+++..... ...+.. .......+++++.+..|+.+. ..+.|.+
T Consensus 40 ~~~~~ld~~~~~~--------~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~v 110 (619)
T 3s94_A 40 EDAAAVDFVFSHG--------LIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEV 110 (619)
T ss_dssp SCEEEEEEETTTT--------EEEEEETTTTEEEEEEC-----CEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEEeCCC--------EEEEEECCCCeEEEEEccCCCceEEEEeC-CCCCcCeEEEEecCCEEEEEeCCCCEEEE
Confidence 3567899998664 0444555678888888775532 223332 335789999999777777665 4589999
Q ss_pred EeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 100 MKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 100 wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
.++........+...-.....|++.|.+..|+.++ ..|...++............-.....+++++++..|+.+..
T Consensus 111 ~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 111 SNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp EETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeC
Confidence 99875543323323344578999999766555533 23776776543322222233456789999998888888777
Q ss_pred CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCcc
Q 036605 176 GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
..+.|..++++ .........-.+.++ ..+.+ ..+ ..+++-...+.|...|..+++..
T Consensus 191 ~~~~I~~~~~d--G~~~~~~~~~~~~~P-~gi~~-----~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 191 KLNFIHKSNLD--GTNRQAVVKGSLPHP-FALTL-----FED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp TTCCEEEESSS--CCEEC---------C-CCEEE-----SSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCCeEEEecCC--CCccEEEEeCCCCCc-eEEEE-----eCC-EEEEecCCCCEEEEEECCCCccc
Confidence 67788888873 221111111112232 22223 233 34444455678999988776543
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.98 E-value=0.00056 Score=62.52 Aligned_cols=189 Identities=11% Similarity=0.176 Sum_probs=113.0
Q ss_pred EEEEEcC-CCcEEEEEc-cCCeeEEEecCCCCCC----------eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 036605 44 LLALGTS-NGDILAVDV-LTGEMKWKSTGRHPGG----------LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREF 111 (340)
Q Consensus 44 ~l~~g~~-dg~i~i~d~-~~~~~~~~~~~~h~~~----------v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 111 (340)
.+++++. ++.|+.+|. .+|+.++++....... -..++. ++..++.++.|+.|..+|..+|+.+..+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 4667777 899999999 9999999886411110 012333 3568888889999999999999998776
Q ss_pred ecCCC----Cee-EEEEccCCCEEEEe-------cCcEEEEECCCCceeEEeecCCCC----------------------
Q 036605 112 KASEK----PIS-SSAFLCEEKIFALA-------SSEVRILSLENGEEVLKFSDDVGP---------------------- 157 (340)
Q Consensus 112 ~~~~~----~i~-~l~~~~~~~~l~~~-------~~~i~i~d~~~~~~~~~~~~~~~~---------------------- 157 (340)
..... .+. ...+. ++..++.. ++.|+.+|..+|+.+-++......
T Consensus 142 ~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g 220 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLG 220 (571)
T ss_dssp ECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHH
T ss_pred cCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccc
Confidence 53220 121 11122 45444443 346999999999888666432110
Q ss_pred ----------------eEEEEECCCCCEEEEEEcC-----------C----CeEEEEEccCCCCCccCCceee-------
Q 036605 158 ----------------LQYVSASDGAKIIITAGYG-----------E----KHLQVWRCDISSKTVNKGPALS------- 199 (340)
Q Consensus 158 ----------------v~~~~~s~~~~~l~s~~~~-----------d----~~i~iwd~~~~~~~~~~~~~~~------- 199 (340)
...+++.++...++.+..+ | +.|..+|. .+++..-.....
T Consensus 221 ~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~--~tG~~~W~~~~~~~d~~d~ 298 (571)
T 2ad6_A 221 TKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDL--DTGMAKWGYQKTPHDEWDF 298 (571)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEET--TTCCEEEEEESSTTCSSCC
T ss_pred cccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEec--CCCcEEEEecCCCCccccc
Confidence 0134566655566554321 1 24777776 455432221110
Q ss_pred -ecCCCeeeeeecCCCCCCCC---EEEEEeCCCcEEEEECCCCCccC
Q 036605 200 -MRHSPVAIDCKNSPNGEDGT---VILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 200 -~~~~~~~~~~~~~~~~~~~~---~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
....+...+. ..+|. .++.++.+|.++++|..+++.+.
T Consensus 299 ~~~~~p~l~~~-----~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 299 AGVNQMVLTDQ-----PVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp CCCCCCEEEEE-----EETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccCCCCEEEec-----ccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 0111222222 23563 56778899999999999987654
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.97 E-value=0.0004 Score=63.57 Aligned_cols=161 Identities=15% Similarity=0.164 Sum_probs=96.7
Q ss_pred ccCCCCceeeeeeCCCCCCC--------CCeEEEEee-ccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCC
Q 036605 2 WSTNDGSLLAEWKQPDGEPV--------VSYSCLACG-FVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRH 72 (340)
Q Consensus 2 wd~~~g~~~~~~~~~~~~~~--------~~v~~l~~s-p~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h 72 (340)
+|+.+|+.+-.+... +|. .++. +... .+|+.++ +++.++.+|.++++|..+|+.++.+....
T Consensus 296 lD~~TG~~~W~~q~~--~~d~wd~~~~~~p~l-~~~~~~~G~~~~------~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 366 (582)
T 1flg_A 296 VDPSSGEVKWFYQHT--PNDAWDFSGNNELVL-FDYKAKDGKIVK------ATAHADRNGFFYVVDRSNGKLQNAFPFVD 366 (582)
T ss_dssp ECTTTCCEEEEEESS--TTCCSCCCCCCCCEE-EEEECSSSCEEE------EEEEECTTSEEEEEETTTCCEEEEEESSS
T ss_pred EeCCCCCEEEEEeCC--CCCcccccCCCCcEE-EeeecCCCCEEE------EEEEECCCceEEEEECCCCCEeccccccc
Confidence 467888888766532 232 1221 1221 3453111 78899999999999999999887765311
Q ss_pred C-----------CC---------------------------------eEEEEEecCCCEEEEEe----------------
Q 036605 73 P-----------GG---------------------------------LAGLAFAKKGRSLHVVG---------------- 92 (340)
Q Consensus 73 ~-----------~~---------------------------------v~~v~~~~~~~~l~s~~---------------- 92 (340)
. +. -..++++|+...+++..
T Consensus 367 ~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 446 (582)
T 1flg_A 367 NITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTK 446 (582)
T ss_dssp CCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCT
T ss_pred CccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccC
Confidence 0 00 01346677666666543
Q ss_pred -----------------CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec--CcEEEEECCCCceeEEeec
Q 036605 93 -----------------TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS--SEVRILSLENGEEVLKFSD 153 (340)
Q Consensus 93 -----------------~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~~i~i~d~~~~~~~~~~~~ 153 (340)
.+|.|..||+.+|+.+.+..... +...-.+...+..++.++ +.++.||.++|+.+.++..
T Consensus 447 g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 447 GSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp TSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 25789999999999887765432 222211222344555544 4499999999999988865
Q ss_pred CCCCe-EEEEECCCCCEEEE
Q 036605 154 DVGPL-QYVSASDGAKIIIT 172 (340)
Q Consensus 154 ~~~~v-~~~~~s~~~~~l~s 172 (340)
..... .-+.|..+|+..++
T Consensus 526 ~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp SSCCCSCCEEEEETTEEEEE
T ss_pred CCCcccCceEEEECCEEEEE
Confidence 33222 22556567764444
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.96 E-value=0.0027 Score=52.97 Aligned_cols=152 Identities=11% Similarity=0.041 Sum_probs=100.5
Q ss_pred eEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEE-ecC-C--CC--CCeEEEEE---ecCCCEEEEEeC
Q 036605 24 YSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWK-STG-R--HP--GGLAGLAF---AKKGRSLHVVGT 93 (340)
Q Consensus 24 v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~-~--h~--~~v~~v~~---~~~~~~l~s~~~ 93 (340)
-.|.+|.+.. + ++++.-..|+|..|+...+..... +.+ . .. ..+.+|.| .|+++++++...
T Consensus 15 PE~~~wd~~~g~---------~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 15 PEDTIYDRTRQV---------FYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp CSCEEEETTTTE---------EEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred CcCccCcCCCCE---------EEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 3478898755 5 555555899999999876643322 221 0 11 13589999 688766665432
Q ss_pred -------------CCcEEEEeCC---CCeEEEEeec-------------CCCCeeEEEEccCCCEEEEe--c-CcEEEEE
Q 036605 94 -------------NGMASEMKSE---MGEVIREFKA-------------SEKPISSSAFLCEEKIFALA--S-SEVRILS 141 (340)
Q Consensus 94 -------------dg~i~~wd~~---~~~~~~~~~~-------------~~~~i~~l~~~~~~~~l~~~--~-~~i~i~d 141 (340)
+..|..+|+. +++.+..... .......+++.++|+..++. . ..|..++
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 5779999999 7876655431 11247899999999988763 3 4466666
Q ss_pred CCCCceeEEe-ec-----CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 142 LENGEEVLKF-SD-----DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 142 ~~~~~~~~~~-~~-----~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
.... .+..+ .. .....+.|++.|+|..|++... .+.|..+|++
T Consensus 166 pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 166 ADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp TTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred CCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 5433 33222 11 1123679999999999998777 9999999984
No 283
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.95 E-value=0.012 Score=54.43 Aligned_cols=198 Identities=9% Similarity=-0.052 Sum_probs=124.3
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-CCcEEE
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-NGMASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~ 99 (340)
.....++|.+.+ + ++.+-..++.|+.+++........+.. .......+++.+.+..|+.+.. .+.|.+
T Consensus 37 ~~~~~l~~d~~~~~---------lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 37 KEASALDFDVTDNR---------IYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp SCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEECCCCE---------EEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEE
Confidence 456789999866 4 556666789999999876544433433 2345778999887777776654 578999
Q ss_pred EeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 100 MKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 100 wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
.++........+...-.....|++.|....|+..+ ..|...++..... ..+...-.....+++++++..|+.+..
T Consensus 107 ~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 107 SKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp EETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEET
T ss_pred EecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEEC
Confidence 99875443222323344578999999655555533 2388788765433 333334456789999998888888777
Q ss_pred CCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 176 GEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
..+.|..++++ .... ..+. .....+..+.+ .. +..+++-...+.|...|..+++.
T Consensus 186 ~~~~I~~~d~d--G~~~-~v~~-~~l~~P~glav-----~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 186 DTNLIESSNML--GLNR-EVIA-DDLPHPFGLTQ-----YQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp TTTEEEEEETT--SCSC-EEEE-ECCSCEEEEEE-----ET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCEEEEEcCC--CCce-EEee-ccCCCceEEEE-----EC-CEEEEecCCCCEEEEEECCCCCc
Confidence 78889999984 2221 1111 11112222222 22 34444545578888888766543
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.92 E-value=0.0069 Score=50.82 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=94.2
Q ss_pred eEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC--CCcEEEE
Q 036605 24 YSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT--NGMASEM 100 (340)
Q Consensus 24 v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--dg~i~~w 100 (340)
...+++.+.+ . ++++-...+.|.++++........+.. .......++++|.+..|+.+.. .+.|...
T Consensus 81 p~glavd~~~g~---------ly~~d~~~~~I~~~~~dG~~~~~l~~~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~ 150 (318)
T 3sov_A 81 PDGLACDWLGEK---------LYWTDSETNRIEVSNLDGSLRKVLFWQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERA 150 (318)
T ss_dssp CCEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEE
T ss_pred ccEEEEEcCCCe---------EEEEECCCCEEEEEECCCCcEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCCEEEEE
Confidence 3456666544 4 555666678899998765433323323 4456789999998777777663 5789998
Q ss_pred eCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCc---EEEEECCCCceeEEe-ecCCCCeEEEEECCCCCEEEEEEcC
Q 036605 101 KSEMGEVIREFKASEKPISSSAFLCEEKIFALASSE---VRILSLENGEEVLKF-SDDVGPLQYVSASDGAKIIITAGYG 176 (340)
Q Consensus 101 d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~---i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~~ 176 (340)
++............-.....|+++|++..|+.++.. |..+|+.... ...+ .........+++.. ..++.+...
T Consensus 151 ~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~--~~lywtd~~ 227 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFE--DILYWTDWS 227 (318)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEET--TEEEEEETT
T ss_pred EcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeC--CEEEEEecC
Confidence 876433222222233456899999988777765533 9999986433 2333 32345566777753 345554665
Q ss_pred CCeEEEEEc
Q 036605 177 EKHLQVWRC 185 (340)
Q Consensus 177 d~~i~iwd~ 185 (340)
.+.|..++.
T Consensus 228 ~~~V~~~~~ 236 (318)
T 3sov_A 228 THSILACNK 236 (318)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEC
Confidence 788888886
No 285
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.91 E-value=0.0032 Score=60.06 Aligned_cols=194 Identities=10% Similarity=0.040 Sum_probs=117.6
Q ss_pred eEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCC
Q 036605 24 YSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSE 103 (340)
Q Consensus 24 v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~ 103 (340)
|.++...+++. |.+|+.++-|..|+..+++........+...|.++...+++. |..++.++-+..||..
T Consensus 175 i~~i~~d~~g~----------lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~ 243 (795)
T 4a2l_A 175 IASTLYRQGDQ----------IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPK 243 (795)
T ss_dssp CEEEEEEETTE----------EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSCEEEEETT
T ss_pred eEEEEECCCCC----------EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCC
Confidence 77888777777 555676656899998877644322211345789998887765 4445555458899988
Q ss_pred CCeEEEEeec-------CCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeec--------CCCCeEEEEECCCCC
Q 036605 104 MGEVIREFKA-------SEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSD--------DVGPLQYVSASDGAK 168 (340)
Q Consensus 104 ~~~~~~~~~~-------~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~s~~~~ 168 (340)
+++....... ....|.++...++|.+.+...+-|.+||..++.. ..+.. ....|.++...++|.
T Consensus 244 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~ 322 (795)
T 4a2l_A 244 TKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGG 322 (795)
T ss_dssp TTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSC
T ss_pred CCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcC
Confidence 7764432211 1346899999999988776555699999877643 33321 225689999999886
Q ss_pred EEEEEEcCCCeEEEEEccCCCCCccCCcee---eec-CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 169 IIITAGYGEKHLQVWRCDISSKTVNKGPAL---SMR-HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 169 ~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
.- .+.. ++-|..|+.. .... ..... ... ....+..+ .. ..+|. |..|+.++-|..|+..+.
T Consensus 323 lW-igt~-~~Gl~~~~~~--~~~~-~~~~~~~~~~~l~~~~V~~i--~~-d~~g~-lWiGt~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 323 MW-LGTY-FGGLNYYHPI--RNRF-KNIRNIPYKNSLSDNVVSCI--VE-DKDKN-LWIGTNDGGLNLYNPITQ 387 (795)
T ss_dssp EE-EEES-SSCEEEECGG--GGSS-EEECCCTTSSSCSCSSEEEE--EE-CTTSC-EEEEESSSCEEEECTTTC
T ss_pred EE-EEEC-CCCeEEeCCC--cccc-eEEcCCCCCCCCCCCeeEEE--EE-CCCCC-EEEEECCCCeEEEcCCCC
Confidence 44 4455 6778888862 2111 00000 000 11123333 22 34554 555777756999987754
No 286
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.90 E-value=0.00063 Score=59.88 Aligned_cols=151 Identities=11% Similarity=0.089 Sum_probs=91.9
Q ss_pred CeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC---c----EEEEECCCCc
Q 036605 75 GLAGLAFAK-KGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASS---E----VRILSLENGE 146 (340)
Q Consensus 75 ~v~~v~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~---~----i~i~d~~~~~ 146 (340)
....|+++| ++..|+.+...+.|..+|+.++...... ........|+++++++.|++++. . +..++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 457899998 4667887776688999999877654433 34456789999999996666543 1 4444432 22
Q ss_pred ee--EEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeec--CCCeeeeeecCCCCCCCCEE-
Q 036605 147 EV--LKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMR--HSPVAIDCKNSPNGEDGTVI- 221 (340)
Q Consensus 147 ~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l- 221 (340)
.. ..+.. ......++++|++.+|+.+....+.|..++.+ .+.... ..... ..+..+.+ ++++.+|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~--~~~~~~--~~~~~~~~~P~gia~-----~pdG~~ly 285 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFT--TQETTP--LFTIQDSGWEFHIQF-----HPSGNYAY 285 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETT--TTEEEE--EEECSSSSCCEEEEE-----CTTSSEEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECC--CCcEEE--EEEcCCCCcceeEEE-----cCCCCEEE
Confidence 21 22222 23456788999433455556557889999873 322111 11111 12333444 7888854
Q ss_pred EEEeCCCcEEEEECCC
Q 036605 222 LAVAESGVAYSWDLKT 237 (340)
Q Consensus 222 ~~~s~dg~i~vwd~~~ 237 (340)
++-...+.|+.++...
T Consensus 286 v~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEeCCc
Confidence 4555678899987653
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.89 E-value=0.006 Score=57.75 Aligned_cols=139 Identities=6% Similarity=-0.014 Sum_probs=89.6
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEeCCCC----eEEEEeecCCCCe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-NGMASEMKSEMG----EVIREFKASEKPI 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~wd~~~~----~~~~~~~~~~~~i 118 (340)
+|+.. ....|+..++........+. ....+.+|+|++.+..||.... .+.|+.+++... .....+.......
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccccc-cccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 34433 44568888887665444343 3457889999987676666554 578988988753 2222333334556
Q ss_pred eEEEEccCCCEEEEecC---cEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCC-CeEEEEEc
Q 036605 119 SSSAFLCEEKIFALASS---EVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGE-KHLQVWRC 185 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~~~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d-~~i~iwd~ 185 (340)
..|++.+.+..|+.++. .|.+.++........+.........|++.|.+.+|+.+..+. +.|.+.++
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 88999988877766443 399999876543333344445688999999877777766533 67777776
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.74 E-value=0.015 Score=48.98 Aligned_cols=182 Identities=12% Similarity=0.144 Sum_probs=103.4
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecC----CC---EEEEEe-C--CCcEEEEeC--CCCeEEEEe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKK----GR---SLHVVG-T--NGMASEMKS--EMGEVIREF 111 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~----~~---~l~s~~-~--dg~i~~wd~--~~~~~~~~~ 111 (340)
+++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+ ++++.. . +.+|.+|++ .++. +..+
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 5555566788999999 7888888764 56777777662 22 223333 3 578999966 4444 4444
Q ss_pred ec------CC-CCeeEEEE--ccC-CC-EEEEecCc--EEEEEC---C----CCceeEEeecCCCCeEEEEECCCCCEEE
Q 036605 112 KA------SE-KPISSSAF--LCE-EK-IFALASSE--VRILSL---E----NGEEVLKFSDDVGPLQYVSASDGAKIII 171 (340)
Q Consensus 112 ~~------~~-~~i~~l~~--~~~-~~-~l~~~~~~--i~i~d~---~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 171 (340)
.. .. ..++.+++ +|. +. ++++.+.+ +..|++ . +.+.+++|.. .+.+..+...+...+|+
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEE
Confidence 21 11 45677777 664 44 45554433 777776 2 3355677764 35678889998888888
Q ss_pred EEEcCCCeEEEEEccCCCCCccCCceeee--cC---CCeeeeeecCCCCCCCC-EEEEEe-CCCcEEEEECC
Q 036605 172 TAGYGEKHLQVWRCDISSKTVNKGPALSM--RH---SPVAIDCKNSPNGEDGT-VILAVA-ESGVAYSWDLK 236 (340)
Q Consensus 172 s~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~-~l~~~s-~dg~i~vwd~~ 236 (340)
.+-. +.-|..++.+...... ....... ++ ...-+.+ .. .+++. +|++.+ .++...+||..
T Consensus 196 v~eE-d~GIw~~da~p~~~~~-~~~v~~~~~g~l~aDvEGLai--~~-~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 196 IAEE-DEAIWKFSAEPDGGSN-GTVIDRADGRHLTRDIEGLTI--YY-AADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEET-TTEEEEEECSTTSCSC-CEEEEEBSSSSBCSCEEEEEE--EE-CGGGCEEEEEEEGGGTEEEEEESS
T ss_pred Eecc-cceEEEEeCCcCCCCC-ceEEEEecCCccccCcceEEE--Ee-cCCCCEEEEEEcCCCCEEEEEECC
Confidence 8666 6544444432222111 0111111 11 1111222 11 34444 555555 57789999986
No 289
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=0.0056 Score=58.27 Aligned_cols=151 Identities=11% Similarity=0.030 Sum_probs=100.7
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEec---CCCCCCeEEEEEecCCCEEEEEeCCCcE
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKST---GRHPGGLAGLAFAKKGRSLHVVGTNGMA 97 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~~~dg~i 97 (340)
...|.++...+++. |.+|+.++-|..||..++... .+. ......|.++...+++. |..|+.++-+
T Consensus 362 ~~~v~~i~~d~~g~----------lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl 429 (781)
T 3v9f_A 362 NKVVSSVCDDGQGK----------LWIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNI 429 (781)
T ss_dssp SSCEEEEEECTTSC----------EEEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSC-EEEEETTEEE
T ss_pred CcceEEEEEcCCCC----------EEEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCC-EEEEeccCCE
Confidence 35688888887777 777777777999997655432 221 11345789998887775 4556776779
Q ss_pred EEEeCCCCeEEEEee--cCCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecC-----CCCeEEEEECCCCCEE
Q 036605 98 SEMKSEMGEVIREFK--ASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDD-----VGPLQYVSASDGAKII 170 (340)
Q Consensus 98 ~~wd~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l 170 (340)
..++..+++...... .....|.++...+++.+.+...+-|..||..+++........ ...|.++...++|...
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 509 (781)
T 3v9f_A 430 SYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW 509 (781)
T ss_dssp EEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE
T ss_pred EEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE
Confidence 999988776433221 134578899998888877766656999998876543222211 3578899999988765
Q ss_pred EEEEcCCCeEEEEEc
Q 036605 171 ITAGYGEKHLQVWRC 185 (340)
Q Consensus 171 ~s~~~~d~~i~iwd~ 185 (340)
+. .. ++-+..||.
T Consensus 510 ig-t~-~~Gl~~~~~ 522 (781)
T 3v9f_A 510 IG-TF-GGGVGIYTP 522 (781)
T ss_dssp EE-ES-SSCEEEECT
T ss_pred EE-Ec-CCCEEEEeC
Confidence 54 44 344666775
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.71 E-value=0.0041 Score=54.69 Aligned_cols=152 Identities=9% Similarity=0.009 Sum_probs=85.5
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCC---C-cEEEEEccCCee-EEEecCCCCCCeEEEEEec-CCCEEEEEeCCC
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSN---G-DILAVDVLTGEM-KWKSTGRHPGGLAGLAFAK-KGRSLHVVGTNG 95 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~d---g-~i~i~d~~~~~~-~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~dg 95 (340)
....+++|+++++ ++++...+ . .+..++...+.. ...+. .-.....++++| ++.++++-..++
T Consensus 182 ~~P~giavd~dG~---------lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~ 250 (433)
T 4hw6_A 182 GQCADVNFTLNGD---------MVVVDDQSSDTNTGIYLFTRASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHA 250 (433)
T ss_dssp SCEEEEEECTTCC---------EEEEECCSCTTSEEEEEECGGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCS
T ss_pred CCccEEEECCCCC---------EEEEcCCCCcccceEEEEECCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECCCC
Confidence 4578899999988 66665422 1 233333322211 01111 123456788999 554444444568
Q ss_pred cEEEEeCCCCeEEEEe-ecCC-CCeeEEEEccCCCEEEEec---CcEEEEECC--CCce--eEEeecC------------
Q 036605 96 MASEMKSEMGEVIREF-KASE-KPISSSAFLCEEKIFALAS---SEVRILSLE--NGEE--VLKFSDD------------ 154 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~-~~~~-~~i~~l~~~~~~~~l~~~~---~~i~i~d~~--~~~~--~~~~~~~------------ 154 (340)
.|..+|..++.....+ .... .....++++|++..|+.++ +.|+.+++. ++.. ...+.+.
T Consensus 251 ~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~ 330 (433)
T 4hw6_A 251 MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGT 330 (433)
T ss_dssp EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGG
T ss_pred EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCccc
Confidence 8999999877763332 2221 2234699999999665544 338888765 2321 1222221
Q ss_pred ---CCCeEEEEE---------CCCCCEEEEEEcCCCeEEEEEc
Q 036605 155 ---VGPLQYVSA---------SDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 155 ---~~~v~~~~~---------s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
-.....+++ .+++..+ .+....+.|+.++.
T Consensus 331 ~a~~~~P~giav~~n~~y~~dd~~g~ly-vaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 331 GARLWGPNQGIFVKNEAYAGEEDEYDFY-FCDRDSHTVRVLTP 372 (433)
T ss_dssp GSBCSSEEEEEEEECGGGTTSSCCEEEE-EEETTTTEEEEECT
T ss_pred ceEEcCCccEEEEccccccccCCCCcEE-EEECCCCEEEEECC
Confidence 123567888 6666544 44554778888874
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.70 E-value=0.0031 Score=52.64 Aligned_cols=153 Identities=7% Similarity=0.039 Sum_probs=97.9
Q ss_pred CeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCeEEEE-eec----CCC--CeeEEEE---ccCCCEEEEec---------
Q 036605 75 GLAGLAFAKKGRSLHVVG-TNGMASEMKSEMGEVIRE-FKA----SEK--PISSSAF---LCEEKIFALAS--------- 134 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~-~~~----~~~--~i~~l~~---~~~~~~l~~~~--------- 134 (340)
.--+++|++....|+.++ ..+.|..||...+..... +.. ... .+..|.+ .|+++++++.+
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 445789998777777777 689999999986654333 221 111 3578999 68888887533
Q ss_pred ------CcEEEEECC---CCceeEEeec-------------CCCCeEEEEECCCCCEEEEEEcCC-CeEEEEEccCCCCC
Q 036605 135 ------SEVRILSLE---NGEEVLKFSD-------------DVGPLQYVSASDGAKIIITAGYGE-KHLQVWRCDISSKT 191 (340)
Q Consensus 135 ------~~i~i~d~~---~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~s~~~~d-~~i~iwd~~~~~~~ 191 (340)
..|..||+. +++.+....- -......++..++|+..++.+. . +.|...+. .++
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-~~~~I~rV~p---dG~ 169 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-GMPAIARVSA---DGK 169 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE-SSCEEEEECT---TSC
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC-CCCeEEEEeC---CCC
Confidence 238999999 7776644421 1134789999999998888776 5 66544443 222
Q ss_pred ccCCceeeecCCC-----eeeeeecCCCCCCCCEEEEEeCCCcEEEEECC
Q 036605 192 VNKGPALSMRHSP-----VAIDCKNSPNGEDGTVILAVAESGVAYSWDLK 236 (340)
Q Consensus 192 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~ 236 (340)
....+. +..+. ....+ .+ .|++..|++....|.|..+|+.
T Consensus 170 ~~~~~~--~~~~~~~~~~G~nGI--v~-~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 170 TVSTFA--WESGNGGQRPGYSGI--TF-DPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CEEEEE--ECCCCSSSCCSCSEE--EE-ETTTTEEEEESSSSSEEEEECS
T ss_pred EEeeee--ecCCCcccccCcceE--EE-eCCCCEEEEEcCCCeEEEEcCC
Confidence 211111 11111 01111 22 6889888888779999999987
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.014 Score=47.11 Aligned_cols=163 Identities=12% Similarity=0.114 Sum_probs=98.3
Q ss_pred CceeeeeeCCCCCCCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCee---EEEec-----CCCCCCeEE
Q 036605 7 GSLLAEWKQPDGEPVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEM---KWKST-----GRHPGGLAG 78 (340)
Q Consensus 7 g~~~~~~~~~~~~~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~---~~~~~-----~~h~~~v~~ 78 (340)
|.++..+... .......+++.+++. ++++.-.++.+.++++..... +.... .......-.
T Consensus 58 g~v~~~i~l~---g~~D~EGIa~~~~g~---------~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG 125 (255)
T 3qqz_A 58 GDLIRTIPLD---FVKDLETIEYIGDNQ---------FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG 125 (255)
T ss_dssp CCEEEEEECS---SCSSEEEEEECSTTE---------EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE
T ss_pred CCEEEEEecC---CCCChHHeEEeCCCE---------EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcce
Confidence 6666555421 224567788888888 777766778899998765432 12221 113445789
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCC---CCeEEEEee-------cCCCCeeEEEEccCCCEEEE-ecCc--EEEEECCCC
Q 036605 79 LAFAKKGRSLHVVGTNGMASEMKSE---MGEVIREFK-------ASEKPISSSAFLCEEKIFAL-ASSE--VRILSLENG 145 (340)
Q Consensus 79 v~~~~~~~~l~s~~~dg~i~~wd~~---~~~~~~~~~-------~~~~~i~~l~~~~~~~~l~~-~~~~--i~i~d~~~~ 145 (340)
++|+|.++.|+++.......+|.+. ....+..+. .....+.+++++|....+++ .+.. +..+|...
T Consensus 126 LA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g- 204 (255)
T 3qqz_A 126 LAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG- 204 (255)
T ss_dssp EEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-
T ss_pred EEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-
Confidence 9999999888887765444444432 111112121 12335789999997666544 3333 88888664
Q ss_pred ceeEEeecCC---------CCeEEEEECCCCCEEEEEEcCCCeEEEEE
Q 036605 146 EEVLKFSDDV---------GPLQYVSASDGAKIIITAGYGEKHLQVWR 184 (340)
Q Consensus 146 ~~~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~~d~~i~iwd 184 (340)
+.+..+.-.. .....|+|.++|+..++ +. .+.+++|.
T Consensus 205 ~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE-~n~~y~f~ 250 (255)
T 3qqz_A 205 EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SE-PNRFYRFT 250 (255)
T ss_dssp CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ET-TTEEEEEE
T ss_pred CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cC-CceEEEEE
Confidence 4554442221 25688999999975555 66 56655554
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.67 E-value=0.034 Score=51.24 Aligned_cols=155 Identities=8% Similarity=-0.043 Sum_probs=99.5
Q ss_pred CCeEEEEeeccc-cccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q 036605 22 VSYSCLACGFVG-KKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG-TNGMASE 99 (340)
Q Consensus 22 ~~v~~l~~sp~~-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~dg~i~~ 99 (340)
..+..++|.+.+ + ++++-...+.|+.+++........+.. .-....++++...+..|+.+. ..+.|.+
T Consensus 349 ~~~~~ld~d~~~~~---------ly~sD~~~~~I~r~~~~g~~~~~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v 418 (619)
T 3s94_A 349 RHAIAIDYDPVEGY---------IYWTDDEVRAIRRSFIDGSGSQFVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEV 418 (619)
T ss_dssp SSEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CccEEEEEEcCCCe---------EEEEeCCCCeEEEEEcCCCccEEEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEE
Confidence 346678888754 4 555555678888888775443333332 334677899987666666665 4578999
Q ss_pred EeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEec----CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEc
Q 036605 100 MKSEMGEVIREFKASEKPISSSAFLCEEKIFALAS----SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 100 wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
.++........+...-.....|++.|....|+.++ ..|...++............-.....+++++++..|+.+..
T Consensus 419 ~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 419 TRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 99875433222333345678999999744554433 23766676543222222333467789999998888888777
Q ss_pred CCCeEEEEEcc
Q 036605 176 GEKHLQVWRCD 186 (340)
Q Consensus 176 ~d~~i~iwd~~ 186 (340)
..+.|..++++
T Consensus 499 ~~~~I~~~~~d 509 (619)
T 3s94_A 499 KTDKIEVMNTD 509 (619)
T ss_dssp TTTEEEEEESS
T ss_pred CCCEEEEEecC
Confidence 67888888873
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.63 E-value=0.0013 Score=61.18 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=73.3
Q ss_pred EEEeec-cccccccccCceEEEEEcCCC-----------cEEEEEccCCeeE--EEecCCCCCCeEEEEEecCCCEEEEE
Q 036605 26 CLACGF-VGKKRRKERGTLLLALGTSNG-----------DILAVDVLTGEMK--WKSTGRHPGGLAGLAFAKKGRSLHVV 91 (340)
Q Consensus 26 ~l~~sp-~~~~~~~~~~~~~l~~g~~dg-----------~i~i~d~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~ 91 (340)
..++.| +++ +++.|+.+. .+.+||..+++.. ..+...+.....++++..+++.++.|
T Consensus 190 ~~av~~~~g~---------l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~G 260 (656)
T 1k3i_A 190 AAAIEPTSGR---------VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTG 260 (656)
T ss_dssp EEEEETTTTE---------EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEEC
T ss_pred eEEEEecCCE---------EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeC
Confidence 456677 777 888876543 5889999887632 22222133334457778889999988
Q ss_pred eC-CCcEEEEeCCCCeEEEEeecCC-CCeeEEEEccCCCEEEEec--------CcEEEEECCCCc
Q 036605 92 GT-NGMASEMKSEMGEVIREFKASE-KPISSSAFLCEEKIFALAS--------SEVRILSLENGE 146 (340)
Q Consensus 92 ~~-dg~i~~wd~~~~~~~~~~~~~~-~~i~~l~~~~~~~~l~~~~--------~~i~i~d~~~~~ 146 (340)
+. +..+.+||+.+.+-...-.... ..-.++++.+++++++.++ .++.+||..+.+
T Consensus 261 G~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 261 GNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp SSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 84 4689999998775332211111 1224566778899888876 239999998775
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.61 E-value=0.023 Score=47.78 Aligned_cols=191 Identities=9% Similarity=0.034 Sum_probs=101.6
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcE-EEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMA-SEM 100 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i-~~w 100 (340)
..+..+.+.++++ +++++. +|.|+. ....|+.-..+...+...+..+++.+++..++.+ .+|.+ +.+
T Consensus 122 ~~~~~i~~~~~~~---------~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~ 189 (327)
T 2xbg_A 122 GSPRLIKALGNGS---------AEMITN-VGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS-SRGSFYSTW 189 (327)
T ss_dssp SCEEEEEEEETTE---------EEEEET-TCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEE-TTSSEEEEE
T ss_pred CCeEEEEEECCCC---------EEEEeC-CccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEE-CCCcEEEEe
Confidence 4567777777677 666554 555432 2233442222222256789999999988777665 44444 444
Q ss_pred eC--CCCeEEEEeecCCCCeeEEEEccCCCEEEEe-cCcEEEEECCCCceeEEeec----CCCCeEEEEECCCCCEEEEE
Q 036605 101 KS--EMGEVIREFKASEKPISSSAFLCEEKIFALA-SSEVRILSLENGEEVLKFSD----DVGPLQYVSASDGAKIIITA 173 (340)
Q Consensus 101 d~--~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~ 173 (340)
|- .+.+.+. ......+..+.+.+++..++.+ ++.+++.+...++.-..+.. +...+..+.+.+++..+++
T Consensus 190 d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~- 266 (327)
T 2xbg_A 190 EPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA- 266 (327)
T ss_dssp CTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE-
T ss_pred CCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE-
Confidence 42 2333331 2234568889999998877665 34466654332333222221 2235788999887766555
Q ss_pred EcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEEC
Q 036605 174 GYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDL 235 (340)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~ 235 (340)
+. ++.+ ++.. ..++.-.........+..+..+ .+ .+ +..+++++.+|.|.-++-
T Consensus 267 g~-~g~i-~~S~--DgG~tW~~~~~~~~~~~~~~~v--~~-~~-~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 267 GG-AGAL-LCSQ--DGGQTWQQDVDVKKVPSNFYKI--LF-FS-PDQGFILGQKGILLRYVT 320 (327)
T ss_dssp ES-TTCE-EEES--STTSSCEECGGGTTSSSCCCEE--EE-EE-TTEEEEECSTTEEEEECC
T ss_pred eC-CCeE-EEeC--CCCcccEEcCccCCCCCCeEEE--EE-EC-CCceEEEcCCceEEEEcC
Confidence 55 6766 3333 2232211111000111222333 22 22 345777788998776654
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.026 Score=53.65 Aligned_cols=196 Identities=12% Similarity=0.068 Sum_probs=114.3
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC----CCCCCeEEEEEecCCCEEEEEeCCCc
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG----RHPGGLAGLAFAKKGRSLHVVGTNGM 96 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~~~dg~ 96 (340)
...|.++...+++. |.+|+. +-|..||..+++....... .....|.++...++|...+ |+.++-
T Consensus 449 ~~~v~~i~~d~~g~----------lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~G 516 (781)
T 3v9f_A 449 LLDVRVFYEDKNKK----------IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGG 516 (781)
T ss_dssp CCCEEEEEECTTSE----------EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSC
T ss_pred CCeEEEEEECCCCC----------EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCC
Confidence 45788888887777 555565 4588999887764432221 0135789999988876544 555445
Q ss_pred EEEEeCCCCeEEEEeec----CCCCeeEEEEccCCCEEEEecCcE-EEEECCCCceeEEeec----CCCCeEEEEECCCC
Q 036605 97 ASEMKSEMGEVIREFKA----SEKPISSSAFLCEEKIFALASSEV-RILSLENGEEVLKFSD----DVGPLQYVSASDGA 167 (340)
Q Consensus 97 i~~wd~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~~~~~~i-~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~ 167 (340)
+..||..+++.. .+.. ....|.++...++|.+.++...-+ ..||..+++ ...+.. ....|.++...++|
T Consensus 517 l~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~-~~~~~~~~gl~~~~i~~i~~d~~g 594 (781)
T 3v9f_A 517 VGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFD-YQVFQRKEGLPNTHIRAISEDKNG 594 (781)
T ss_dssp EEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCC-CEEECGGGTCSCCCCCEEEECSSS
T ss_pred EEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCc-EEEccccCCCCCceEEEEEECCCC
Confidence 778998776543 3321 234688999999998877766556 889887764 333321 12457888888888
Q ss_pred CEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCC
Q 036605 168 KIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTV 238 (340)
Q Consensus 168 ~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~ 238 (340)
...++ +. .| |..|+. .++. ...+...-+-+...+...+.+..++|. |..|+.+| +..++....
T Consensus 595 ~lW~~-t~-~G-l~~~~~--~~~~-~~~~~~~dGl~~~~f~~~~~~~~~~G~-l~~g~~~G-l~~f~p~~~ 657 (781)
T 3v9f_A 595 NIWAS-TN-TG-ISCYIT--SKKC-FYTYDHSNNIPQGSFISGCVTKDHNGL-IYFGSING-LCFFNPDIA 657 (781)
T ss_dssp CEEEE-CS-SC-EEEEET--TTTE-EEEECGGGTCCSSCEEEEEEEECTTSC-EEEEETTE-EEEECSCCG
T ss_pred CEEEE-cC-Cc-eEEEEC--CCCc-eEEecccCCccccccccCceEECCCCE-EEEECCCc-eEEEChhhc
Confidence 76555 33 44 666775 2221 111110001111111111112145665 55677788 777776543
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.54 E-value=0.011 Score=49.04 Aligned_cols=137 Identities=9% Similarity=0.049 Sum_probs=68.6
Q ss_pred EEEEEcCC-----CcEEEEEccCCe---eEEEecCCCCCCe-EEEEEecCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 036605 44 LLALGTSN-----GDILAVDVLTGE---MKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTN-----GMASEMKSEMGEVIR 109 (340)
Q Consensus 44 ~l~~g~~d-----g~i~i~d~~~~~---~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~ 109 (340)
+++.|+.+ ..+.+||..+.+ ....-.- ....- .+++.. ++..++.|+.+ ..+.+||+.+.+-..
T Consensus 65 l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~-p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 142 (301)
T 2vpj_A 65 IYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM-NVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM 142 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC-SSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred EEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC-CCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEE
Confidence 77777754 468999988876 3322111 11111 122222 56666666543 368899988765332
Q ss_pred EeecCCCCe-eEEEEccCCCEEEEec-------CcEEEEECCCCceeEE--eecCCCCeEEEEECCCCCEEEEEEcC---
Q 036605 110 EFKASEKPI-SSSAFLCEEKIFALAS-------SEVRILSLENGEEVLK--FSDDVGPLQYVSASDGAKIIITAGYG--- 176 (340)
Q Consensus 110 ~~~~~~~~i-~~l~~~~~~~~l~~~~-------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~~--- 176 (340)
.-....... .+++. -++++++.++ .++.+||+.+.+-... +.........+.+ ++..++.++..
T Consensus 143 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 143 LGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTA 219 (301)
T ss_dssp EEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS
T ss_pred CCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCc
Confidence 211111111 22222 2566666543 2389999987743221 1111111222222 45566665552
Q ss_pred -CCeEEEEEc
Q 036605 177 -EKHLQVWRC 185 (340)
Q Consensus 177 -d~~i~iwd~ 185 (340)
...+.+||+
T Consensus 220 ~~~~v~~yd~ 229 (301)
T 2vpj_A 220 HLSSVEAYNI 229 (301)
T ss_dssp BCCCEEEEET
T ss_pred ccceEEEEeC
Confidence 145788887
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.52 E-value=0.02 Score=47.52 Aligned_cols=137 Identities=9% Similarity=0.011 Sum_probs=69.3
Q ss_pred EEEEEcCC----CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeCC------CcEEEEeCCCCeEEEEee
Q 036605 44 LLALGTSN----GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTN------GMASEMKSEMGEVIREFK 112 (340)
Q Consensus 44 ~l~~g~~d----g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~ 112 (340)
+++.|+.+ ..+.+||..+.+....-.- ..... .+++. -++..++.|+.+ ..+.+||+.+.+-...-.
T Consensus 58 lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~ 135 (306)
T 3ii7_A 58 VYILGGSQLFPIKRMDCYNVVKDSWYSKLGP-PTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS 135 (306)
T ss_dssp EEEECCBSSSBCCEEEEEETTTTEEEEEECC-SSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCCCcceEEEEeCCCCeEEECCCC-CccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC
Confidence 77777754 6789999988864332211 11111 12222 256666666654 468899998875332211
Q ss_pred cCCCC-eeEEEEccCCCEEEEec-----------CcEEEEECCCCceeEE--eecCCCCeEEEEECCCCCEEEEEEcCC-
Q 036605 113 ASEKP-ISSSAFLCEEKIFALAS-----------SEVRILSLENGEEVLK--FSDDVGPLQYVSASDGAKIIITAGYGE- 177 (340)
Q Consensus 113 ~~~~~-i~~l~~~~~~~~l~~~~-----------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~~d- 177 (340)
..... -.+++. -++++++.++ .++.+||+.+.+-... +.........+.+ +++.++.++...
T Consensus 136 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 136 MLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGL 212 (306)
T ss_dssp CSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETT
T ss_pred CcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCC
Confidence 11111 122222 3555555543 3388999988743211 1111111122222 455666655421
Q ss_pred ---CeEEEEEc
Q 036605 178 ---KHLQVWRC 185 (340)
Q Consensus 178 ---~~i~iwd~ 185 (340)
..+.+||+
T Consensus 213 ~~~~~~~~yd~ 223 (306)
T 3ii7_A 213 GGLDNVEYYDI 223 (306)
T ss_dssp EEBCCEEEEET
T ss_pred CCCceEEEeeC
Confidence 45778887
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.49 E-value=0.036 Score=47.03 Aligned_cols=152 Identities=14% Similarity=0.125 Sum_probs=91.5
Q ss_pred CeEEEEeeccccccccccCceEEEEE------------cCCCcEEEEEccC--Cee-EEEecCC----CCCCeEEEEEec
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALG------------TSNGDILAVDVLT--GEM-KWKSTGR----HPGGLAGLAFAK 83 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g------------~~dg~i~i~d~~~--~~~-~~~~~~~----h~~~v~~v~~~~ 83 (340)
.+-.++..|+|. .++++ ..+|.|.++|..+ ++. ...+.+. .......+.+.+
T Consensus 51 G~EDi~~~~~G~---------~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 51 GSEDLEILPNGL---------AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp CCCEEEECTTSE---------EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEE
T ss_pred CcceeEEcCCCe---------EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEE
Confidence 445566778776 44443 2689999999874 231 1122221 223567788766
Q ss_pred --CCC-EEEEEeC---CCcEEEEeCCC--CeE--EEEeecC-CCCeeEEEEccCCCEEEEec------------------
Q 036605 84 --KGR-SLHVVGT---NGMASEMKSEM--GEV--IREFKAS-EKPISSSAFLCEEKIFALAS------------------ 134 (340)
Q Consensus 84 --~~~-~l~s~~~---dg~i~~wd~~~--~~~--~~~~~~~-~~~i~~l~~~~~~~~l~~~~------------------ 134 (340)
++. +|+.+.. +..|.+|++.. +.. +..+.+. -.....+.+.++|.+.++.+
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~ 201 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 201 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence 354 5666543 35677766543 322 2223322 23568999999999877743
Q ss_pred -CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 135 -SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 135 -~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
+.|+-+|. ++ +..+...-...+.++|+||+++++.+....+.|..|+++
T Consensus 202 ~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 202 WSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp CEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 11444444 32 222222234568999999999999887768899999985
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.43 E-value=0.00082 Score=62.98 Aligned_cols=177 Identities=7% Similarity=-0.023 Sum_probs=99.8
Q ss_pred CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEeCCC----CeEEEEeecCCCCeeEEEEc
Q 036605 50 SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-NGMASEMKSEM----GEVIREFKASEKPISSSAFL 124 (340)
Q Consensus 50 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~wd~~~----~~~~~~~~~~~~~i~~l~~~ 124 (340)
....|+..++.+.+....+. ....+.+|+|++.+..|+.+.. .+.|..+++.. ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 44678888888766543333 3345778999998888877654 47899999875 22221222222235678888
Q ss_pred cCCCEEEEec---CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCC-CeEEEEEccCCCCCccCCce-ee
Q 036605 125 CEEKIFALAS---SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGE-KHLQVWRCDISSKTVNKGPA-LS 199 (340)
Q Consensus 125 ~~~~~l~~~~---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d-~~i~iwd~~~~~~~~~~~~~-~~ 199 (340)
+.+..|+.++ +.|.++++........+.........++++|.+.+|+.+.... +.|.+++++ . .....+. ..
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d--G-~~~~~l~~~~ 538 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--G-VDIYSLVTEN 538 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS--S-CCCCEESCSS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC--C-CCeeEEEeCC
Confidence 6555554433 3499999876543322222234567889999766666644423 677777763 2 1111111 01
Q ss_pred ecCCCeeeeeecCCCCCC-CCEEEEEeCCCcEEEEECCC
Q 036605 200 MRHSPVAIDCKNSPNGED-GTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~-~~~l~~~s~dg~i~vwd~~~ 237 (340)
+. .+.-+.+ +++ +.++++-+..+.|.++++..
T Consensus 539 l~-~PnGlav-----d~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 539 IQ-WPNGITL-----DLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CS-SCCCEEE-----CTTTCCEEEEETTTTEEEEECSSS
T ss_pred CC-CccEEEE-----eccCCEEEEEecCCCeEEEEccCC
Confidence 11 1222333 444 44555556667899998864
No 301
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.41 E-value=0.041 Score=45.72 Aligned_cols=188 Identities=11% Similarity=0.117 Sum_probs=115.7
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-CeEEEEeecCC----CCe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEM-GEVIREFKASE----KPI 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~----~~i 118 (340)
.+|.-. ..++.|+|+++.+.+..+. ....|..=.|-.+ +.|+-.+. ..|+.|++.. ..+...|..|. ..|
T Consensus 80 ViALra-g~~LQiFnletK~klks~~--~~e~VvfWkWis~-~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QI 154 (365)
T 2xzh_A 80 VIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQI 154 (365)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEEE--CSSCEEEEEECSS-SEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEE
T ss_pred EEEEec-CCeEEEechHHhhhhccee--cCCccEEEEecCC-CeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceE
Confidence 777765 7789999999998887776 4567887788743 45554443 4899999874 34555565543 356
Q ss_pred eEEEEccCCCEEEEe-----c----CcEEEEECCCCceeEEeecCCCCeEEEEECC--CCCEEEEEEcC---CCeEEEEE
Q 036605 119 SSSAFLCEEKIFALA-----S----SEVRILSLENGEEVLKFSDDVGPLQYVSASD--GAKIIITAGYG---EKHLQVWR 184 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~-----~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~~~~---d~~i~iwd 184 (340)
-....+++.++++.. + |.+.+|..+.+ .-+.+.+|...-..+.+.. ....|++-+.. .+.++|.+
T Consensus 155 InY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiE 233 (365)
T 2xzh_A 155 INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 233 (365)
T ss_dssp EEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 667778899988652 2 22889988766 4466777765443333321 11223332331 26899999
Q ss_pred ccCC-CCCc-cCCceeeecCC-------CeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 185 CDIS-SKTV-NKGPALSMRHS-------PVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 185 ~~~~-~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+... .+.. ...-...+..+ |..+.+ ++....++..+.-|.|++||+.++..+.
T Consensus 234 i~~~~~~~~~f~kk~vdi~fppea~~DFPVamqv-----s~kygviyviTK~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 234 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-----SEKHDVVFLITKYGYIHLYDLETGTCIY 295 (365)
T ss_dssp CSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEE-----ETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred cCCCCCCCCCcccccceeeCCccccCCceEEEEe-----cccCCEEEEEeCCcEEEEEEcccCcEEE
Confidence 8432 1111 10001111111 122222 4556778888999999999999987665
No 302
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.33 E-value=0.038 Score=45.72 Aligned_cols=137 Identities=14% Similarity=0.114 Sum_probs=68.2
Q ss_pred EEEEEcCC-----CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeCCC-----cEEEEeCCCCeEEEEee
Q 036605 44 LLALGTSN-----GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTNG-----MASEMKSEMGEVIREFK 112 (340)
Q Consensus 44 ~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~ 112 (340)
+++.|+.+ ..+.+||..+.+... +.......- .+++. -++..++.|+.++ .+.+||+.+.+-...-.
T Consensus 64 lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 141 (302)
T 2xn4_A 64 VFAVGGFNGSLRVRTVDSYDPVKDQWTS-VANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP 141 (302)
T ss_dssp EEEESCBCSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCcCCCccccceEEECCCCCceee-CCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC
Confidence 67777654 368899988876432 221011111 12222 2566667776553 57788988765332211
Q ss_pred cCCC-CeeEEEEccCCCEEEEec---------CcEEEEECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcCC---
Q 036605 113 ASEK-PISSSAFLCEEKIFALAS---------SEVRILSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYGE--- 177 (340)
Q Consensus 113 ~~~~-~i~~l~~~~~~~~l~~~~---------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~d--- 177 (340)
.... .-.+++. -++++++.++ .++.+||+.+.+-.. .+.........+.+ ++..++.++...
T Consensus 142 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 142 MNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLV 218 (302)
T ss_dssp CSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSB
T ss_pred CCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcc
Confidence 1111 1122222 2455555543 238899998764322 11111112222222 455666655521
Q ss_pred -CeEEEEEc
Q 036605 178 -KHLQVWRC 185 (340)
Q Consensus 178 -~~i~iwd~ 185 (340)
..+.+||+
T Consensus 219 ~~~~~~yd~ 227 (302)
T 2xn4_A 219 RKSVEVYDP 227 (302)
T ss_dssp CCCEEEEET
T ss_pred cceEEEEeC
Confidence 35788887
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.28 E-value=0.11 Score=47.91 Aligned_cols=200 Identities=7% Similarity=-0.016 Sum_probs=115.9
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC-----CCCCCeEEEEEecCCCEEEEEe-CCC
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG-----RHPGGLAGLAFAKKGRSLHVVG-TNG 95 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-----~h~~~v~~v~~~~~~~~l~s~~-~dg 95 (340)
..+..++|.+.+. .++.+=...+.|+.++.........+.. .....+.++++...++.|+.+. ..+
T Consensus 340 ~~~~~ld~d~~~~--------~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~ 411 (628)
T 4a0p_A 340 RNVRAIDYDPLDK--------QLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATN 411 (628)
T ss_dssp SCEEEEEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEecCCC--------eEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCC
Confidence 4467788887653 0444545567888887654332222221 0234688999998877776554 567
Q ss_pred cEEEEeCCCCeEEEEe-ecCCCCeeEEEEcc-CCCEEEE-ec-C--cEEEEECCCCceeEEeecCCCCeEEEEECCCCCE
Q 036605 96 MASEMKSEMGEVIREF-KASEKPISSSAFLC-EEKIFAL-AS-S--EVRILSLENGEEVLKFSDDVGPLQYVSASDGAKI 169 (340)
Q Consensus 96 ~i~~wd~~~~~~~~~~-~~~~~~i~~l~~~~-~~~~l~~-~~-~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 169 (340)
.|.+.++. |+....+ .........|++.| .|.++.+ .+ . .|...++........+...-.....+++++++..
T Consensus 412 ~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 412 VINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp EEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred EEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCE
Confidence 89999986 4544333 33445689999999 4555555 22 2 3666666533222222333456789999998888
Q ss_pred EEEEEcCCCeEEEEEccCCCCCccCCcee-eecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 170 IITAGYGEKHLQVWRCDISSKTVNKGPAL-SMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 170 l~s~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
|+.+....+.|..++++ . .....+.. .+.| +..+.+ .++..+.+-...+.|...|..+++.
T Consensus 491 LYw~D~~~~~I~~~~~d--G-~~r~~~~~~~~~~-P~glav------~~~~ly~tD~~~~~i~~~~k~~G~~ 552 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLS--G-ANRIVLEDSNILQ-PVGLTV------FENWLYWIDKQQQMIEKIDMTGREG 552 (628)
T ss_dssp EEEEETTTTEEEEEETT--S-CSCEEEECSSCSC-EEEEEE------ETTEEEEEETTTTEEEEEETTSSSC
T ss_pred EEEEeCCCCEEEEEeCC--C-CceEEEEcCCCCC-cEEEEE------ECCEEEEEECCCCeEEEEECcCCCC
Confidence 88877667889888884 2 11111110 0112 222222 1234445555566777777766553
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.26 E-value=0.036 Score=46.57 Aligned_cols=151 Identities=11% Similarity=0.066 Sum_probs=89.8
Q ss_pred CCCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 20 PVVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 20 ~~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
....+..+++.|+++ +++++. +|.++.-+-..+..-..+.......+..+.+.+++..+ .++.+|.+.+
T Consensus 161 ~~~~~~~~~~~~~~~---------~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGE---------YVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp CCCCEEEEEECTTSC---------EEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCcceEEEEEcCCCc---------EEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 345688899999888 676664 45554432111332222222255688999999888654 5567788877
Q ss_pred EeCCCCeEEEEeecC----CCCeeEEEEccCCCEEEEecCc-EEEEECCCCceeEEee---cCCCCeEEEEECCCCCEEE
Q 036605 100 MKSEMGEVIREFKAS----EKPISSSAFLCEEKIFALASSE-VRILSLENGEEVLKFS---DDVGPLQYVSASDGAKIII 171 (340)
Q Consensus 100 wd~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~~~~~-i~i~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~ 171 (340)
.+...|+.-..+... ...+.++++.+++.+++++... + .+....++.-..+. .....+..+.|.+++. ++
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~ 307 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GF 307 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EE
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eE
Confidence 643334433333211 2357889999888877775544 5 45555554433333 2245678888876654 55
Q ss_pred EEEcCCCeEEEEE
Q 036605 172 TAGYGEKHLQVWR 184 (340)
Q Consensus 172 s~~~~d~~i~iwd 184 (340)
+++. +|.|.-++
T Consensus 308 ~~G~-~G~i~~~~ 319 (327)
T 2xbg_A 308 ILGQ-KGILLRYV 319 (327)
T ss_dssp EECS-TTEEEEEC
T ss_pred EEcC-CceEEEEc
Confidence 5566 78766554
No 305
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.18 E-value=0.058 Score=44.93 Aligned_cols=126 Identities=13% Similarity=0.032 Sum_probs=61.4
Q ss_pred EEEEEccCCeeEEEecCCCCCCe--EEEEEecCCCEEEEEeCC--------CcEEEEeCCCCeEEEEeecCCCCe-eEEE
Q 036605 54 ILAVDVLTGEMKWKSTGRHPGGL--AGLAFAKKGRSLHVVGTN--------GMASEMKSEMGEVIREFKASEKPI-SSSA 122 (340)
Q Consensus 54 i~i~d~~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~~d--------g~i~~wd~~~~~~~~~~~~~~~~i-~~l~ 122 (340)
+.+||..+++.. .+.. -..+- .+++.. ++..++.|+.+ ..+.+||+.+.+-...-....... .+++
T Consensus 69 ~~~~d~~~~~W~-~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 145 (315)
T 4asc_A 69 FLQFDHLDSEWL-GMPP-LPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL 145 (315)
T ss_dssp EEEEETTTTEEE-ECCC-BSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred eEEecCCCCeEE-ECCC-CCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE
Confidence 788998887643 2222 11111 122222 45555666532 458899998765322111111111 2222
Q ss_pred EccCCCEEEEecC--------cEEEEECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcCCC----eEEEEEc
Q 036605 123 FLCEEKIFALASS--------EVRILSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYGEK----HLQVWRC 185 (340)
Q Consensus 123 ~~~~~~~l~~~~~--------~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~d~----~i~iwd~ 185 (340)
. -++++++.++. ++.+||+.+.+-.. .+.........+.+ +++.++.++..+. .+.+||+
T Consensus 146 ~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 146 S-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp E-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEET
T ss_pred E-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEEC
Confidence 2 45566666543 28999998764321 11111111222222 5566777666322 4677776
No 306
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.13 E-value=0.085 Score=43.97 Aligned_cols=127 Identities=14% Similarity=0.097 Sum_probs=60.8
Q ss_pred EEEEEccCCeeEEEecC-CCCCCeEEEEEecCCCEEEEEeCC-------CcEEEEeCCCCeEEEEeecCCCCe-eEEEEc
Q 036605 54 ILAVDVLTGEMKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTN-------GMASEMKSEMGEVIREFKASEKPI-SSSAFL 124 (340)
Q Consensus 54 i~i~d~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~~~~~~~~~~i-~~l~~~ 124 (340)
+.+||..+.+... +.. .....-.+++.. ++..++.|+.+ ..+.+||+.+.+-...-....... .+++.
T Consensus 80 ~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 156 (318)
T 2woz_A 80 FFQLDNVSSEWVG-LPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS- 156 (318)
T ss_dssp EEEEETTTTEEEE-CSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-
T ss_pred EEEEeCCCCcEEE-CCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-
Confidence 7889988876432 221 011111122222 56666666653 247888988765332211111111 12222
Q ss_pred cCCCEEEEecC--------cEEEEECCCCceeEE--eecCCCCeEEEEECCCCCEEEEEEcCC----CeEEEEEc
Q 036605 125 CEEKIFALASS--------EVRILSLENGEEVLK--FSDDVGPLQYVSASDGAKIIITAGYGE----KHLQVWRC 185 (340)
Q Consensus 125 ~~~~~l~~~~~--------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~~d----~~i~iwd~ 185 (340)
.++++++.++. ++.+||+.+.+-... +.........+.+ +++.++.+|..+ ..+.+||+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEET
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEEC
Confidence 45666655442 289999988743221 1111111122222 456666666522 34667776
No 307
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.12 E-value=0.079 Score=52.51 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=82.8
Q ss_pred EEEEEc----------CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEE-Eee
Q 036605 44 LLALGT----------SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIR-EFK 112 (340)
Q Consensus 44 ~l~~g~----------~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~ 112 (340)
+|++|+ ..|.|++|++..++..........++|++++-- +| +|+++ -...|++|++...+.+. ...
T Consensus 846 ~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~ 922 (1158)
T 3ei3_A 846 YFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLAS-INSTVRLYEWTTEKELRTECN 922 (1158)
T ss_dssp EEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEE-ETTEEEEEEECTTSCEEEEEE
T ss_pred EEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEE-cCCEEEEEECCCCceEEEEee
Confidence 888887 358899999986654333322256789998854 35 44443 34689999997655333 111
Q ss_pred cCCCCeeEEEEccCCCEEEEecCc--E--EEEECCCCceeEEe--ecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEcc
Q 036605 113 ASEKPISSSAFLCEEKIFALASSE--V--RILSLENGEEVLKF--SDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 113 ~~~~~i~~l~~~~~~~~l~~~~~~--i--~i~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
... .+..+.+...+.+++++|-. + .-|+...++ +..+ ..+..+++++.|-.++ .++.+.. +|.+.+...+
T Consensus 923 ~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~~a~D~~~~~vta~~~ld~~-t~l~aD~-~gNl~vl~~~ 998 (1158)
T 3ei3_A 923 HYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-FEEIARDFNPNWMSAVEILDDD-NFLGAEN-AFNLFVCQKD 998 (1158)
T ss_dssp ECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-EEEEEECCSCBCEEEEEEEETT-EEEEEET-TSEEEEEEEC
T ss_pred ccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-EEEEEeecccccEEEEEEEccC-cEEEEcC-CCcEEEEecC
Confidence 111 13333343456777777654 4 445655443 3333 2345678888887665 4555444 8999999885
Q ss_pred C
Q 036605 187 I 187 (340)
Q Consensus 187 ~ 187 (340)
.
T Consensus 999 ~ 999 (1158)
T 3ei3_A 999 S 999 (1158)
T ss_dssp T
T ss_pred C
Confidence 3
No 308
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.11 E-value=0.026 Score=50.09 Aligned_cols=157 Identities=11% Similarity=0.002 Sum_probs=91.1
Q ss_pred eEEEEEec-CCCEEEEEeCC-CcEEEEeCCCCeEEEEeecCC---CCeeEEEE-------ccCCCEEEEec-C------c
Q 036605 76 LAGLAFAK-KGRSLHVVGTN-GMASEMKSEMGEVIREFKASE---KPISSSAF-------LCEEKIFALAS-S------E 136 (340)
Q Consensus 76 v~~v~~~~-~~~~l~s~~~d-g~i~~wd~~~~~~~~~~~~~~---~~i~~l~~-------~~~~~~l~~~~-~------~ 136 (340)
...|+|+| ++..|+.+... +.|++.|+.++.......... .....|+| ++++..|++++ . .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56899998 45666666554 679999998877665444322 24789999 99998655532 1 1
Q ss_pred --EEEEECCC-Ccee-----EEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccC-----CCCCcc-----C----
Q 036605 137 --VRILSLEN-GEEV-----LKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDI-----SSKTVN-----K---- 194 (340)
Q Consensus 137 --i~i~d~~~-~~~~-----~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~-----~~~~~~-----~---- 194 (340)
|.+++... +... ..+... .....++++|++.+|+.+...++.|..+|+.. .++... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 66666433 2211 122211 23457788997667777677688999999840 022220 0
Q ss_pred -CceeeecCCCeeeeeecCCCCCCCCE-EEEEeCCCcEEEEECC
Q 036605 195 -GPALSMRHSPVAIDCKNSPNGEDGTV-ILAVAESGVAYSWDLK 236 (340)
Q Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~s~dg~i~vwd~~ 236 (340)
...+......+...+ ++ ++++.+ +++-+..++|+.++..
T Consensus 300 ~~~l~~~~~~~~p~~i--a~-~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 300 FKQLFTIADPSWEFQI--FI-HPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEEECSSSSCCEEE--EE-CTTSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEecCCCCCceEE--EE-cCCCCEEEEEeCCCCEEEEEecC
Confidence 011122222222222 33 788885 4444566788886643
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.11 E-value=0.11 Score=44.88 Aligned_cols=188 Identities=11% Similarity=0.122 Sum_probs=116.9
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-CeEEEEeecCC----CCe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEM-GEVIREFKASE----KPI 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~----~~i 118 (340)
.+|.-. ..++.|||+++...+..+. ....|..=.|-.+ +.|+..+ +..|+.|++.. ..++..|..|. ..|
T Consensus 79 iiALra-g~~lQiFnle~K~klks~~--~~e~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QI 153 (494)
T 1bpo_A 79 VIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQI 153 (494)
T ss_dssp CEEEEE-TTEEEEEETTTTEEEEEEE--CSSCCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEE
T ss_pred EEEEec-CCeEEEEchHHhhhhccee--cCCCceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheecchhcccceE
Confidence 677665 7799999999998887776 3456777777643 4555544 45899999964 34555565543 456
Q ss_pred eEEEEccCCCEEEEe-----c----CcEEEEECCCCceeEEeecCCCCeEEEEECCC--CCEEEEEEcC---CCeEEEEE
Q 036605 119 SSSAFLCEEKIFALA-----S----SEVRILSLENGEEVLKFSDDVGPLQYVSASDG--AKIIITAGYG---EKHLQVWR 184 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~-----~----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~~---d~~i~iwd 184 (340)
-....+++.++++.. + |.+.+|..+.+ .-+.+.+|...-..+.+..+ ...+++-+.. .+.++|.+
T Consensus 154 InY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~E 232 (494)
T 1bpo_A 154 INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (494)
T ss_dssp EEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 677788999988652 2 23889988766 44667777665554544322 1223333332 37899999
Q ss_pred ccCC-CCC-ccCCceeeecCC-------CeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 185 CDIS-SKT-VNKGPALSMRHS-------PVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 185 ~~~~-~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+... .+. ....-...+..+ |..+.+ ++....++..+.-|.|++||+.++..+.
T Consensus 233 i~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqv-----s~kygviyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-----SEKHDVVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEE-----ETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred cCCCccCCCCccceeeeeeCCcccccCceeEEEe-----cccCCEEEEEecCceEEEEecccceeee
Confidence 8432 111 111101111111 122223 5666778889999999999999987665
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.08 E-value=0.057 Score=45.97 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=63.0
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe-eEEEec--CCCCCCeEEEEEecC---CCEEEEEeC--
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE-MKWKST--GRHPGGLAGLAFAKK---GRSLHVVGT-- 93 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~--~~h~~~v~~v~~~~~---~~~l~s~~~-- 93 (340)
.....|+|.|+++ + +++..+|.|++++ .+++ .+..+. .........|+|+|+ +..|+.+..
T Consensus 29 ~~P~~ia~~pdG~---------l-~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 29 EVPWSIAPLGGGR---------Y-LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF 97 (354)
T ss_dssp SCEEEEEEEETTE---------E-EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CCCeEEEEcCCCe---------E-EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc
Confidence 4567899999999 4 4445669999997 4554 222221 112356899999998 566666543
Q ss_pred --C----CcEEEEeCCCC-------eEE-EEeec-CCCCeeEEEEccCCCEEEE
Q 036605 94 --N----GMASEMKSEMG-------EVI-REFKA-SEKPISSSAFLCEEKIFAL 132 (340)
Q Consensus 94 --d----g~i~~wd~~~~-------~~~-~~~~~-~~~~i~~l~~~~~~~~l~~ 132 (340)
+ ..|..|+.... +.+ ..+.. .......|+|.|||.++++
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 2 57888887654 111 11221 1123467999999987776
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.05 E-value=0.029 Score=47.72 Aligned_cols=99 Identities=17% Similarity=0.117 Sum_probs=62.9
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeE--EEec--CCCCCCeEEEEEecC---CCEEEEEeCC
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMK--WKST--GRHPGGLAGLAFAKK---GRSLHVVGTN 94 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~--~~~~--~~h~~~v~~v~~~~~---~~~l~s~~~d 94 (340)
.....|+|.|+|+ +++ +..+|.|++++ +++.. ..+. .........|+|+|+ +..|+.+...
T Consensus 31 ~~P~~ia~~pdG~---------l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 31 EVPWALAFLPDGG---------MLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp SCEEEEEECTTSC---------EEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCceEEEEcCCCe---------EEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 3567899999999 544 45669999998 45422 1111 112457899999998 6666665442
Q ss_pred ------CcEEEEeCCCCe-----EEE-Eee---cCCCCeeEEEEccCCCEEEE
Q 036605 95 ------GMASEMKSEMGE-----VIR-EFK---ASEKPISSSAFLCEEKIFAL 132 (340)
Q Consensus 95 ------g~i~~wd~~~~~-----~~~-~~~---~~~~~i~~l~~~~~~~~l~~ 132 (340)
..|..|+...+. .+. .+. ........++|.|+|.+.++
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 678888876542 111 122 11123468999999977666
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.99 E-value=0.049 Score=45.21 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=67.4
Q ss_pred EEEEEcC----C-----CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeCC-----CcEEEEeCCCCeEE
Q 036605 44 LLALGTS----N-----GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTN-----GMASEMKSEMGEVI 108 (340)
Q Consensus 44 ~l~~g~~----d-----g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~ 108 (340)
+++.|+. + ..+.+||..+.+... +........ .+++.. +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 73 lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 150 (308)
T 1zgk_A 73 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP-CAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWH 150 (308)
T ss_dssp EEEECCEEEETTEEEECCCEEEEETTTTEEEE-CCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEE
T ss_pred EEEECCCcCCCCCCeecceEEEECCCCCeEeE-CCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEe
Confidence 6777665 2 468899988876432 221011111 122222 56666666543 46889998876533
Q ss_pred EE--eecCCCCeeEEEEccCCCEEEEec-------CcEEEEECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcC-
Q 036605 109 RE--FKASEKPISSSAFLCEEKIFALAS-------SEVRILSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYG- 176 (340)
Q Consensus 109 ~~--~~~~~~~i~~l~~~~~~~~l~~~~-------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~- 176 (340)
.. +...... .+++.. ++++++.++ .++.+||+.+.+-.. .+.........+.+ ++..++.++..
T Consensus 151 ~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 226 (308)
T 1zgk_A 151 LVAPMLTRRIG-VGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDG 226 (308)
T ss_dssp ECCCCSSCCBS-CEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred ECCCCCccccc-eEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCC
Confidence 22 1111111 122222 555555543 238999998764321 11111112222333 55566665552
Q ss_pred ---CCeEEEEEc
Q 036605 177 ---EKHLQVWRC 185 (340)
Q Consensus 177 ---d~~i~iwd~ 185 (340)
-..+.+||+
T Consensus 227 ~~~~~~v~~yd~ 238 (308)
T 1zgk_A 227 QDQLNSVERYDV 238 (308)
T ss_dssp SSBCCCEEEEET
T ss_pred CCccceEEEEeC
Confidence 145788887
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0069 Score=51.00 Aligned_cols=192 Identities=13% Similarity=0.120 Sum_probs=100.2
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEe--cCCCEEEEE--eCCCcEEEEeCCCCeEEEEeec----CC
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFA--KKGRSLHVV--GTNGMASEMKSEMGEVIREFKA----SE 115 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~--~~dg~i~~wd~~~~~~~~~~~~----~~ 115 (340)
++++++.||.|+-+|..+|+..+++......++....-. +.+..++.+ ..||.|..++..+|.....+.. ..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 699999999999999999999999975211222221100 112244444 5899999999998866554432 11
Q ss_pred CCeeE---EEE------ccCCCEEEE--ecCcEEEEECCCCceeEEeecCC--CC-----eEEEEEC-----CCCCEEEE
Q 036605 116 KPISS---SAF------LCEEKIFAL--ASSEVRILSLENGEEVLKFSDDV--GP-----LQYVSAS-----DGAKIIIT 172 (340)
Q Consensus 116 ~~i~~---l~~------~~~~~~l~~--~~~~i~i~d~~~~~~~~~~~~~~--~~-----v~~~~~s-----~~~~~l~s 172 (340)
.++.. ..+ +. +..+++ .++.+...|+.+|+.+..+.... .. ..+.... ..+..++.
T Consensus 92 SP~~~~~~pvv~~~~~~~~-~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVE-DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp CSEEEECC----------C-CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred cccccCCCceeeccccccc-CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 22211 001 12 334444 34449999999999988775321 10 0111110 12345666
Q ss_pred EEcCCCeEEEEEccCCCCCccCCceeeecCCC-eeeeeecCC-CCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 173 AGYGEKHLQVWRCDISSKTVNKGPALSMRHSP-VAIDCKNSP-NGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 173 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+.. +..+.+.+- +++ .-...+...... ....+...+ .+.++.+ +.++.||.|+-+|..++..+-
T Consensus 171 g~~-~y~v~~~~~---sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKT-IFELGIHSY---DGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEE-EEECEECCT---TSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecc-eEEEEEECC---CCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 555 566666551 232 111111100000 000000000 0234555 457889999999988876554
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.89 E-value=0.066 Score=44.18 Aligned_cols=137 Identities=11% Similarity=0.062 Sum_probs=68.3
Q ss_pred EEEEEc-CC-----CcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCe---EEE
Q 036605 44 LLALGT-SN-----GDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTN-----GMASEMKSEMGE---VIR 109 (340)
Q Consensus 44 ~l~~g~-~d-----g~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----g~i~~wd~~~~~---~~~ 109 (340)
+++.|+ .+ ..+.+||+.+.+... +...........+...++..++.|+.+ ..+.+||+.+.+ -..
T Consensus 17 i~~~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~ 95 (301)
T 2vpj_A 17 LLVVGGFGSQQSPIDVVEKYDPKTQEWSF-LPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYS 95 (301)
T ss_dssp EEEECCEETTTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEE
T ss_pred EEEEeCccCCCcceeEEEEEcCCCCeEEe-CCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEE
Confidence 666776 33 478999998876432 221011111111122356666666654 468899988765 222
Q ss_pred E--eecCCCCeeEEEEccCCCEEEEecC-------cEEEEECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcC--
Q 036605 110 E--FKASEKPISSSAFLCEEKIFALASS-------EVRILSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYG-- 176 (340)
Q Consensus 110 ~--~~~~~~~i~~l~~~~~~~~l~~~~~-------~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~-- 176 (340)
. +...... .+++. .++++++.++. ++.+||+.+.+-.. .+.........+.+ +++.++.++..
T Consensus 96 ~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 96 VAPMNVRRGL-AGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGL 171 (301)
T ss_dssp ECCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred CCCCCCCccc-eeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCC
Confidence 1 2111111 22222 25555555432 38999988764332 12111112222222 55566665542
Q ss_pred --CCeEEEEEc
Q 036605 177 --EKHLQVWRC 185 (340)
Q Consensus 177 --d~~i~iwd~ 185 (340)
-..+.+||+
T Consensus 172 ~~~~~~~~~d~ 182 (301)
T 2vpj_A 172 NILNSVEKYDP 182 (301)
T ss_dssp CBCCCEEEEET
T ss_pred cccceEEEEeC
Confidence 245778887
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.81 E-value=0.041 Score=42.95 Aligned_cols=144 Identities=11% Similarity=0.043 Sum_probs=83.5
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe------eEEEecC-CCCCCeEEEEEecCCCEEEEEeCCC
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE------MKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNG 95 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~------~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg 95 (340)
.+++++|+|++. +.++ .+|.++-.+..+.. ....+-. +-. .-.++.|.|+|.+.++ .||
T Consensus 42 ~~~~laf~P~G~---------LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG 107 (236)
T 1tl2_A 42 NFKFLFLSPGGE---------LYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKD 107 (236)
T ss_dssp TCSEEEECTTSC---------EEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETT
T ss_pred cceeEEECCCcc---------EEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCC
Confidence 667999999998 6666 78877777654421 1111211 011 1478899999876666 569
Q ss_pred cEEEEeCCCCeEE------EEe-ecCCCCeeEEEEccCCCEEEEecCcEEEEECCCCce------eEEee-cCCCCeEEE
Q 036605 96 MASEMKSEMGEVI------REF-KASEKPISSSAFLCEEKIFALASSEVRILSLENGEE------VLKFS-DDVGPLQYV 161 (340)
Q Consensus 96 ~i~~wd~~~~~~~------~~~-~~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~------~~~~~-~~~~~v~~~ 161 (340)
.|.-++..+...- ..+ ...=..+..|.+.|+|.+.++.++.++-....++.. ...+. ..-..-+.+
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l 187 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFL 187 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEETTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEeCCcEEecCCCCCCCcccccccceeccCCcceEEEE
Confidence 9998886442110 011 111235789999999999888866654332221110 01111 222344557
Q ss_pred EECCCCCEEEEEEcCCCeEEEEEc
Q 036605 162 SASDGAKIIITAGYGEKHLQVWRC 185 (340)
Q Consensus 162 ~~s~~~~~l~s~~~~d~~i~iwd~ 185 (340)
.|.+++....+. ++ ++|..
T Consensus 188 ~f~~~G~l~~v~---~g--~~Y~~ 206 (236)
T 1tl2_A 188 FFSSVGTLFGVQ---GG--KFYED 206 (236)
T ss_dssp EECTTSCEEEEE---TT--EEEEE
T ss_pred EECCCCcEEEEe---CC--eEEec
Confidence 789998766653 45 45554
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.80 E-value=0.2 Score=49.64 Aligned_cols=176 Identities=11% Similarity=0.062 Sum_probs=98.9
Q ss_pred cEEEEEccCCeeEEEecCCCCCCeEEEEE---ecC-CCEEEEEe----------CCCcEEEEeCCCCeEEEEe-ecCCCC
Q 036605 53 DILAVDVLTGEMKWKSTGRHPGGLAGLAF---AKK-GRSLHVVG----------TNGMASEMKSEMGEVIREF-KASEKP 117 (340)
Q Consensus 53 ~i~i~d~~~~~~~~~~~~~h~~~v~~v~~---~~~-~~~l~s~~----------~dg~i~~wd~~~~~~~~~~-~~~~~~ 117 (340)
.|+++|..+.+.+..+.-.....+.+++. ..+ ..+|+.|. ..|.|.+|++..++..... +..+++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 46777777777665554323345555553 222 35777765 2478999998755432221 123567
Q ss_pred eeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCce
Q 036605 118 ISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPA 197 (340)
Q Consensus 118 i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~ 197 (340)
+++++-- +|++++..+..|++|++...+.++.-..+-..+..+.....+.+++.+.. -..|.++.++....+. . .
T Consensus 888 v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~-~~Sv~~~~y~~~~~~L-~--~ 962 (1158)
T 3ei3_A 888 VYSMVEF-NGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDL-MRSVLLLAYKPMEGNF-E--E 962 (1158)
T ss_dssp EEEEEEE-TTEEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEES-SBCEEEEEEETTTTEE-E--E
T ss_pred CEEEeee-CCEEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEh-hheEEEEEEEcCCCeE-E--E
Confidence 8887754 46777778888999999876544411111112332233234668888666 6667776664222111 1 1
Q ss_pred eeec-CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 198 LSMR-HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 198 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
+.-. .+.++.++ .+ -+...++.+..+|.+.++....
T Consensus 963 ~a~D~~~~~vta~--~~--ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 963 IARDFNPNWMSAV--EI--LDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEECCSCBCEEEE--EE--EETTEEEEEETTSEEEEEEECT
T ss_pred EEeecccccEEEE--EE--EccCcEEEEcCCCcEEEEecCC
Confidence 1111 22233333 22 1234788899999999998765
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.69 E-value=0.14 Score=44.19 Aligned_cols=102 Identities=8% Similarity=0.124 Sum_probs=66.7
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEEEEeecC----CCCeeEEEEccCCCEEEE-ecCcEEEEECCCCc-----------
Q 036605 83 KKGRSLHVVGTNGMASEMKSEMGEVIREFKAS----EKPISSSAFLCEEKIFAL-ASSEVRILSLENGE----------- 146 (340)
Q Consensus 83 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~-~~~~i~i~d~~~~~----------- 146 (340)
.+|..++.+ .++.|+.-++......+.++.. -..+..+..+|+|.+|+. +..+|.|..+..+.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 355555553 3356666666643333334332 235788999999999987 55559988886321
Q ss_pred -eeEEeec------CCCCeEEEEECCCC---CEEEEEEcCCCeEEEEEcc
Q 036605 147 -EVLKFSD------DVGPLQYVSASDGA---KIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 147 -~~~~~~~------~~~~v~~~~~s~~~---~~l~s~~~~d~~i~iwd~~ 186 (340)
..+.+.- ...+|..+.|+|-+ ..|++-.. |+.|++||+.
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts-D~~Ir~yDl~ 157 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE-DDTITMFDIL 157 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET-TSCEEEEETT
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec-CCEEEEEEcc
Confidence 1123322 24679999999864 46777666 9999999995
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.66 E-value=0.14 Score=42.28 Aligned_cols=100 Identities=9% Similarity=-0.070 Sum_probs=52.9
Q ss_pred EEEEEcC--CCcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeCC----CcEEEEeCCCCeEEEEeecCCC
Q 036605 44 LLALGTS--NGDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTN----GMASEMKSEMGEVIREFKASEK 116 (340)
Q Consensus 44 ~l~~g~~--dg~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~~~ 116 (340)
+++.|+. ...+.+||..+++... +........ .+++. -++..++.|+.+ ..+.+||+.+.+-...-.....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTD-IRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEE-CCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEec-CCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 5556654 3679999998886442 221011111 12222 256666666654 5688999888753322111111
Q ss_pred Ce-eEEEEccCCCEEEEecC--------cEEEEECCCCc
Q 036605 117 PI-SSSAFLCEEKIFALASS--------EVRILSLENGE 146 (340)
Q Consensus 117 ~i-~~l~~~~~~~~l~~~~~--------~i~i~d~~~~~ 146 (340)
.. .+++ .-++++++.++. ++.+||+.+.+
T Consensus 92 r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 92 RDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp CBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred ccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 11 1222 225666666542 28999998874
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.58 E-value=0.14 Score=42.13 Aligned_cols=137 Identities=11% Similarity=0.155 Sum_probs=66.8
Q ss_pred EEEEEcCC----CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeCC-----CcEEEEeCCCCeEEEEeec
Q 036605 44 LLALGTSN----GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTN-----GMASEMKSEMGEVIREFKA 113 (340)
Q Consensus 44 ~l~~g~~d----g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~ 113 (340)
+++.|+.+ ..+.+||+.+.+... +........ .+++.. ++..++.|+.+ ..+.+||+.+.+-...-..
T Consensus 18 i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 18 MVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 66667654 468899998876432 222011111 122222 56666666644 3588999887653322111
Q ss_pred CCCC-eeEEEEccCCCEEEEecC-------cEEEEECCCCceeEE--eecCCCCeEEEEECCCCCEEEEEEcC------C
Q 036605 114 SEKP-ISSSAFLCEEKIFALASS-------EVRILSLENGEEVLK--FSDDVGPLQYVSASDGAKIIITAGYG------E 177 (340)
Q Consensus 114 ~~~~-i~~l~~~~~~~~l~~~~~-------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~~------d 177 (340)
.... -.+++. -++.+++.++. ++.+||+.+.+-... +.........+.+ +++.++.++.. -
T Consensus 96 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 96 RDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp SSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEEC
T ss_pred CccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccc
Confidence 1111 122222 24555555442 388999887643221 1111111122222 45555555441 1
Q ss_pred CeEEEEEc
Q 036605 178 KHLQVWRC 185 (340)
Q Consensus 178 ~~i~iwd~ 185 (340)
..+.+||+
T Consensus 173 ~~~~~yd~ 180 (302)
T 2xn4_A 173 STVECYNA 180 (302)
T ss_dssp CCEEEEET
T ss_pred cEEEEEeC
Confidence 34778887
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.42 E-value=0.22 Score=41.21 Aligned_cols=136 Identities=10% Similarity=0.015 Sum_probs=67.8
Q ss_pred EEEEEcCC----CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeC----C-----CcEEEEeCCCCeEEE
Q 036605 44 LLALGTSN----GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGT----N-----GMASEMKSEMGEVIR 109 (340)
Q Consensus 44 ~l~~g~~d----g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~----d-----g~i~~wd~~~~~~~~ 109 (340)
+++.|+.+ ..+.+||..+.+... +........ .+++.. ++..++.|+. + ..+.+||+.+.+-..
T Consensus 27 i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~ 104 (308)
T 1zgk_A 27 IYTAGGYFRQSLSYLEAYNPSNGTWLR-LADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP 104 (308)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEE
T ss_pred EEEEeCcCCCCcceEEEEcCCCCeEeE-CCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeE
Confidence 67777642 478999998876432 221011111 122222 5556666654 2 468899988765322
Q ss_pred E--eecCCCCeeEEEEccCCCEEEEec-------CcEEEEECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcC--
Q 036605 110 E--FKASEKPISSSAFLCEEKIFALAS-------SEVRILSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYG-- 176 (340)
Q Consensus 110 ~--~~~~~~~i~~l~~~~~~~~l~~~~-------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~-- 176 (340)
. +...... .+++. -++++++.++ .++.+||+.+.+-.. .+.........+.+ ++..++.++..
T Consensus 105 ~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 105 CAPMSVPRNR-IGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGT 180 (308)
T ss_dssp CCCCSSCCBT-CEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred CCCCCcCccc-cEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCC
Confidence 2 1111111 22222 2566665544 238999998764321 11111122222333 55566665542
Q ss_pred --CCeEEEEEc
Q 036605 177 --EKHLQVWRC 185 (340)
Q Consensus 177 --d~~i~iwd~ 185 (340)
-..+.+||+
T Consensus 181 ~~~~~~~~yd~ 191 (308)
T 1zgk_A 181 NRLNSAECYYP 191 (308)
T ss_dssp CBCCCEEEEET
T ss_pred CcCceEEEEeC
Confidence 145788887
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.33 E-value=0.4 Score=40.47 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=83.4
Q ss_pred CCCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeE--EEec---CCCCCCeEEEEEecC---CCEEEEE-
Q 036605 21 VVSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMK--WKST---GRHPGGLAGLAFAKK---GRSLHVV- 91 (340)
Q Consensus 21 ~~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~--~~~~---~~h~~~v~~v~~~~~---~~~l~s~- 91 (340)
-...+.|+|.|+|+ ++++--..|.|++++..+++.. ..+. ....+....|+|+|+ +..|+..
T Consensus 31 L~~P~~ia~~pdG~---------llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 31 LNSPWGLAPLPGGD---------LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp CSSEEEEEECTTSC---------EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred CCCceEEEEcCCCc---------EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 34668999999999 6666555899999987666532 2221 113557899999995 4556553
Q ss_pred --eCCCcEEEEeCCCC----------eEEE-Eee-cCCCCeeEEEEccCCCEEEEec---------------CcEEEEEC
Q 036605 92 --GTNGMASEMKSEMG----------EVIR-EFK-ASEKPISSSAFLCEEKIFALAS---------------SEVRILSL 142 (340)
Q Consensus 92 --~~dg~i~~wd~~~~----------~~~~-~~~-~~~~~i~~l~~~~~~~~l~~~~---------------~~i~i~d~ 142 (340)
..+..|.-|.+..+ +.+. .+. ........|+|.|||.+.++.+ +.|.-++.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 24556777766541 1111 121 1122346799999998777732 12444444
Q ss_pred CCCc-------eeEEe-ecCCCCeEEEEECCCCCEEEE
Q 036605 143 ENGE-------EVLKF-SDDVGPLQYVSASDGAKIIIT 172 (340)
Q Consensus 143 ~~~~-------~~~~~-~~~~~~v~~~~~s~~~~~l~s 172 (340)
...- ....+ .+|.+ ...++|+|+|...++
T Consensus 182 dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~ 218 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFAS 218 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEE
T ss_pred CCCccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEE
Confidence 3210 01112 34444 467899998865555
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.27 E-value=0.15 Score=43.31 Aligned_cols=101 Identities=11% Similarity=0.040 Sum_probs=61.5
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEec------CCCCCCeEEEEEecC---CCEEEEEe
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKST------GRHPGGLAGLAFAKK---GRSLHVVG 92 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~------~~h~~~v~~v~~~~~---~~~l~s~~ 92 (340)
.....|+|.|+++ .|+++...|.|++++. .+.....+. ....+....|+|+|+ +..|+.+.
T Consensus 18 ~~P~~i~~~pdG~---------~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 18 DHPWALAFLPDNH---------GMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SSEEEEEECSTTC---------CEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCcEEEEEcCCCC---------EEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 3567899999997 5777778899999985 343221111 112346789999996 56666553
Q ss_pred C--------CCcEEEEeCCCC-----eEEEEeec------CCCCeeEEEEccCCCEEEE
Q 036605 93 T--------NGMASEMKSEMG-----EVIREFKA------SEKPISSSAFLCEEKIFAL 132 (340)
Q Consensus 93 ~--------dg~i~~wd~~~~-----~~~~~~~~------~~~~i~~l~~~~~~~~l~~ 132 (340)
. ...|..|++..+ .....+.. .......|+|.|||.++++
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA 146 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence 2 235777766533 11111221 1122467999999976665
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.15 E-value=0.42 Score=40.51 Aligned_cols=121 Identities=4% Similarity=-0.056 Sum_probs=75.0
Q ss_pred CCcEEEEEccCC--e--eEEEecCCCCCCeEEEEEecCCCEEEEEe-----------------CCCcEEEEeCCCCeEEE
Q 036605 51 NGDILAVDVLTG--E--MKWKSTGRHPGGLAGLAFAKKGRSLHVVG-----------------TNGMASEMKSEMGEVIR 109 (340)
Q Consensus 51 dg~i~i~d~~~~--~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-----------------~dg~i~~wd~~~~~~~~ 109 (340)
+..|.+|++..+ . .+..+.+..-...+.+.+.++|...++.. ..|.|..+|.. +. .
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~-~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV-R 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC-E
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE-E
Confidence 567778776653 2 23344442334679999999998766643 12556666653 22 2
Q ss_pred EeecCCCCeeEEEEccCCCEEEEec---CcEEEEECCC-Cce--eEEeecCCCCeEEEEECC-CCCEEEEEEc
Q 036605 110 EFKASEKPISSSAFLCEEKIFALAS---SEVRILSLEN-GEE--VLKFSDDVGPLQYVSASD-GAKIIITAGY 175 (340)
Q Consensus 110 ~~~~~~~~i~~l~~~~~~~~l~~~~---~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~s~~~ 175 (340)
.+...-...+.++|+||++.++.++ +.|+.|++.. ++. ...+ ...+....+++.+ +|.+.+++..
T Consensus 215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence 2222234568999999999887754 3499999863 322 1233 2345667889998 5877766554
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.09 E-value=0.36 Score=48.31 Aligned_cols=188 Identities=11% Similarity=0.118 Sum_probs=111.1
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-CeEEEEeecC----CCCe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEM-GEVIREFKAS----EKPI 118 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~----~~~i 118 (340)
.+|.-. ..++.|||+++...+..+. ....|..=.|-.+. .|+..+ +..|..|++.. ..++..|..| ...|
T Consensus 79 iiALra-g~~lQiFnl~~k~klks~~--~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QI 153 (1630)
T 1xi4_A 79 VIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQI 153 (1630)
T ss_pred eEEEec-CCeEEEeehHHhhhhcccc--cCCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCee
Confidence 666664 7799999999887666655 34567777776433 444433 45899999964 2344444444 3456
Q ss_pred eEEEEccCCCEEEEec---------CcEEEEECCCCceeEEeecCCCCeEEEEEC--CCCCEEEEEEcC---CCeEEEEE
Q 036605 119 SSSAFLCEEKIFALAS---------SEVRILSLENGEEVLKFSDDVGPLQYVSAS--DGAKIIITAGYG---EKHLQVWR 184 (340)
Q Consensus 119 ~~l~~~~~~~~l~~~~---------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~s~~~~---d~~i~iwd 184 (340)
-....+++.++++..| |.+.+|..+.+ ..+.+.+|.+.-..+.+. +....+++-+.. .+.++|-+
T Consensus 154 inY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~E 232 (1630)
T 1xi4_A 154 INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (1630)
T ss_pred EEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEe
Confidence 6677888899886521 23788887655 335556666554444442 222233332331 37899999
Q ss_pred ccCC-CCC-ccCCceeeecCC-------CeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 185 CDIS-SKT-VNKGPALSMRHS-------PVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 185 ~~~~-~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+... .+. ....-...+..+ |..+.+ ++....+...+.-|.|++||+.++..+.
T Consensus 233 i~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~v-----s~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-----SEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred cCCCccCCCCCccccccccCCcccccCcceEEEe-----ccccCEEEEEecCceEEEEecccchhhh
Confidence 8432 111 110001111111 222223 5666778888999999999999987665
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.07 E-value=0.69 Score=40.73 Aligned_cols=102 Identities=17% Similarity=0.227 Sum_probs=62.7
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeE--EEecCC-----CCCCeEEEEEecC---CCEEEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMK--WKSTGR-----HPGGLAGLAFAKK---GRSLHVV 91 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~--~~~~~~-----h~~~v~~v~~~~~---~~~l~s~ 91 (340)
...+.|+|.|+|+ ++++-...+.|++++..+++.. ..+... ..+....|+|+|+ +..|+.+
T Consensus 27 ~~P~~~a~~pdG~---------l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 27 NKPHALLWGPDNQ---------IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SSEEEEEECTTSC---------EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCceEEEEcCCCc---------EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 3567999999999 6665544457998886655432 223221 2456789999996 6666665
Q ss_pred eC-------------CCcEEEEeCCCC--e-----EEEE-eec-CCCCeeEEEEccCCCEEEE
Q 036605 92 GT-------------NGMASEMKSEMG--E-----VIRE-FKA-SEKPISSSAFLCEEKIFAL 132 (340)
Q Consensus 92 ~~-------------dg~i~~wd~~~~--~-----~~~~-~~~-~~~~i~~l~~~~~~~~l~~ 132 (340)
.. ...|..|+...+ . .+.. +.. .......|+|.|||.+.++
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 42 235666665322 1 1111 221 1234689999999987776
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.01 E-value=0.43 Score=40.33 Aligned_cols=50 Identities=18% Similarity=0.211 Sum_probs=26.7
Q ss_pred EEEEEcC-C---------CcEEEEEccCCeeEEEecCCC-CCCeEEEEEecCCCEEEEEeCC
Q 036605 44 LLALGTS-N---------GDILAVDVLTGEMKWKSTGRH-PGGLAGLAFAKKGRSLHVVGTN 94 (340)
Q Consensus 44 ~l~~g~~-d---------g~i~i~d~~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d 94 (340)
+++.|+. + ..+.+||+.+.+....-.. . .......+...+++.++.|+.+
T Consensus 68 lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 68 LYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSH-APMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCC-CSSCCSSEEEEEETTEEEEEECCC
T ss_pred EEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCC-CCcccccceEEEECCEEEEEeCcC
Confidence 6777665 2 4789999988764432111 1 1111121222456677777754
No 327
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.76 E-value=0.32 Score=37.99 Aligned_cols=131 Identities=7% Similarity=-0.026 Sum_probs=74.5
Q ss_pred EEEEEcCCCcEEEEEccCCe------eEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeE------EEEe
Q 036605 44 LLALGTSNGDILAVDVLTGE------MKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEV------IREF 111 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~------~~~~ 111 (340)
+|++..+| +++.=....+. ...++-...-..+..++|+|+|. |+.. .+|.+...+..++.. -..+
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~I 82 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRAKKI 82 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHCEEE
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccccEe
Confidence 56666666 65554433332 11122111124678999999887 5555 778888877755211 1111
Q ss_pred e-cCCCCeeEEEEccCCCEEEEecCcEEEEECCCCcee------EEeec-CCCCeEEEEECCCCCEEEEEEcCCCeE
Q 036605 112 K-ASEKPISSSAFLCEEKIFALASSEVRILSLENGEEV------LKFSD-DVGPLQYVSASDGAKIIITAGYGEKHL 180 (340)
Q Consensus 112 ~-~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~------~~~~~-~~~~v~~~~~s~~~~~l~s~~~~d~~i 180 (340)
- ..-....++.|.|+|.+.++.++.|+-++-.+...- ..+-. --..+..+.|.|+|...+.. |+.+
T Consensus 83 G~~Gw~~F~a~~fD~~G~LYav~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~---dg~l 156 (236)
T 1tl2_A 83 GNGGWNQFQFLFFDPNGYLYAVSKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH---GQQF 156 (236)
T ss_dssp ECSCGGGCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE---TTEE
T ss_pred cccccccceEEEECCCCCEEEeCCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe---CCcE
Confidence 0 011124789999999999888887877765332111 11111 11457899999999655553 5554
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.65 E-value=0.77 Score=37.98 Aligned_cols=135 Identities=10% Similarity=0.018 Sum_probs=67.9
Q ss_pred EEEEEcCCCcEEEEEccCCeeEE-EecCCCCCCeEEEEEecCCCEEEEEeC----C-------CcEEEEeCCCCeEEEEe
Q 036605 44 LLALGTSNGDILAVDVLTGEMKW-KSTGRHPGGLAGLAFAKKGRSLHVVGT----N-------GMASEMKSEMGEVIREF 111 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~~~----d-------g~i~~wd~~~~~~~~~~ 111 (340)
+++.|+ ..+.+||..+++... .+.. ........+...++..++.|+. + ..+.+||+.+.+-. .+
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-EC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-EC
Confidence 556666 579999999887443 1111 1123333333446777777773 1 12778898876532 22
Q ss_pred ecCCCC-e-eEEEEccCCCEEEEec----------CcEEEEECCCCceeE--EeecCCCCeEEEEECCCCCEEEEEEcCC
Q 036605 112 KASEKP-I-SSSAFLCEEKIFALAS----------SEVRILSLENGEEVL--KFSDDVGPLQYVSASDGAKIIITAGYGE 177 (340)
Q Consensus 112 ~~~~~~-i-~~l~~~~~~~~l~~~~----------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~~d 177 (340)
.....+ . .+++.. ++.+++.++ .++.+||+.+.+-.. .+.........+. -+++.++.++..+
T Consensus 83 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 159 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGS 159 (315)
T ss_dssp CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCT
T ss_pred CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCC
Confidence 111111 1 122222 455555544 128999998764221 1111111112222 3455556655411
Q ss_pred -----CeEEEEEc
Q 036605 178 -----KHLQVWRC 185 (340)
Q Consensus 178 -----~~i~iwd~ 185 (340)
..+.+||.
T Consensus 160 ~~~~~~~~~~yd~ 172 (315)
T 4asc_A 160 DRKCLNKMCVYDP 172 (315)
T ss_dssp TSCBCCCEEEEET
T ss_pred CCcccceEEEEeC
Confidence 45788887
No 329
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.28 E-value=0.63 Score=39.41 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=60.3
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEE--EEee---cCCCCeeEEEEccC---CCEEEEec--------CcE
Q 036605 74 GGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVI--REFK---ASEKPISSSAFLCE---EKIFALAS--------SEV 137 (340)
Q Consensus 74 ~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~--~~~~---~~~~~i~~l~~~~~---~~~l~~~~--------~~i 137 (340)
.....++|.|+|+ |+.+..+|.|.+++ +++.. ..+. ........|+++|+ +..|+++. ..|
T Consensus 31 ~~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3568999999998 45557779999998 44422 2121 12346789999998 44544322 347
Q ss_pred EEEECCCCc-----ee-EEee---cCCCCeEEEEECCCCCEEEEEE
Q 036605 138 RILSLENGE-----EV-LKFS---DDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 138 ~i~d~~~~~-----~~-~~~~---~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
..|++..+. .+ ..+. ........++|.|||...++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 788876431 11 1132 1112346899999996655543
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.22 E-value=1.4 Score=38.21 Aligned_cols=114 Identities=7% Similarity=0.013 Sum_probs=68.8
Q ss_pred ccCCCEEE-EecCcEEEEECCCCceeEEeecC----CCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCC-CCc-----
Q 036605 124 LCEEKIFA-LASSEVRILSLENGEEVLKFSDD----VGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISS-KTV----- 192 (340)
Q Consensus 124 ~~~~~~l~-~~~~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~-~~~----- 192 (340)
..+|..++ ..++.||.-++......+.+... -..+..+..+|+|.+|+..+ +..|.|-.++... ...
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--CCeEEEEEecCccccCcccccc
Confidence 34454444 45556888887754333344332 23688899999999998854 5799999985211 100
Q ss_pred --cCCceeeecC-----CCeeeeeecCC--CCCCCCEEEEEeCCCcEEEEECCCCCcc
Q 036605 193 --NKGPALSMRH-----SPVAIDCKNSP--NGEDGTVILAVAESGVAYSWDLKTVSQD 241 (340)
Q Consensus 193 --~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~l~~~s~dg~i~vwd~~~~~~~ 241 (340)
.....+.++. ...+..+ .| .+..+..|++-..|+.|++||+......
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qV--lWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~ 162 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKV--LFHPKSYRDSCIVVLKEDDTITMFDILNSQEK 162 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEE--EECTTBGGGCEEEEEETTSCEEEEETTCTTSC
T ss_pred cccceeEEEcCCcccCCCCceeEE--EeccccCCCCeEEEEecCCEEEEEEcccCCCC
Confidence 1111222221 2233444 34 1445678999999999999999874433
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.08 E-value=1.1 Score=37.07 Aligned_cols=99 Identities=11% Similarity=0.118 Sum_probs=50.7
Q ss_pred EEEEEcCC-------CcEEEEEccCCeeEEEecCCCCCCe--EEEEEecCCCEEEEEeC------CCcEEEEeCCCCeEE
Q 036605 44 LLALGTSN-------GDILAVDVLTGEMKWKSTGRHPGGL--AGLAFAKKGRSLHVVGT------NGMASEMKSEMGEVI 108 (340)
Q Consensus 44 ~l~~g~~d-------g~i~i~d~~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~ 108 (340)
+++.|+.+ ..+.+||..+.+.... .. ...+. .+++. .+++.++.|+. -..+.+||+.+.+-.
T Consensus 112 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 112 IYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KN-LPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp EEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CC-CSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred EEEEcCccCCCCcccceEEEEeCCCCCEeEC-CC-CCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 66666643 3578899888764432 11 11111 11222 35656666653 235899999877533
Q ss_pred EEeecCCC-CeeEEEEccCCCEEEEecC-------cEEEEECCCCc
Q 036605 109 REFKASEK-PISSSAFLCEEKIFALASS-------EVRILSLENGE 146 (340)
Q Consensus 109 ~~~~~~~~-~i~~l~~~~~~~~l~~~~~-------~i~i~d~~~~~ 146 (340)
..-..... .-.+++. -++++++.++. ++.+||+.+.+
T Consensus 189 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 189 DLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 22111111 1122333 24556555442 28899988764
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.01 E-value=1.3 Score=36.66 Aligned_cols=136 Identities=10% Similarity=0.105 Sum_probs=81.6
Q ss_pred EEEeeccccccccccCceEEEEEc----CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeC-CCcEEEE
Q 036605 26 CLACGFVGKKRRKERGTLLLALGT----SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGT-NGMASEM 100 (340)
Q Consensus 26 ~l~~sp~~~~~~~~~~~~~l~~g~----~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-dg~i~~w 100 (340)
+..|++++. .|+-.. .+..|+..++.... ..++.. +.. .+|+++++.|+-.+. ...|.+.
T Consensus 108 ~~~~s~~g~---------~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~-~~~----~~~~~~g~~iy~t~~g~~~Iy~~ 172 (302)
T 3s25_A 108 CIYASLIGN---------YIYYLHYDTQTATSLYRIRIDGEE-KKKIKN-HYL----FTCNTSDRYFYYNNPKNGQLYRY 172 (302)
T ss_dssp EEEEEEETT---------EEEEEEESSSSCEEEEEEETTSCC-CEEEES-SCC----CCSEEETTEEEEECTTTCCEEEE
T ss_pred ccEEEEeCC---------EEEEEeecCCCCceEEEEECCCCC-eEEEeC-CCc----eEeeEECCEEEEEeCCCceEEEE
Confidence 357888887 566554 34566666766443 444544 332 456778888887765 5789999
Q ss_pred eCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC----cEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcC
Q 036605 101 KSEMGEVIREFKASEKPISSSAFLCEEKIFALASS----EVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYG 176 (340)
Q Consensus 101 d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~----~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 176 (340)
++..+.....+. .... ..+.|++.+|+-.+. .|..-++.... ...+.. ..+ ..|+|++.+|+.+...
T Consensus 173 ~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~ 243 (302)
T 3s25_A 173 DTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGG 243 (302)
T ss_dssp ETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECS
T ss_pred ECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECC
Confidence 988776544333 2222 346698888866332 37666776553 333332 233 4478889898875442
Q ss_pred -CCeEEEEEc
Q 036605 177 -EKHLQVWRC 185 (340)
Q Consensus 177 -d~~i~iwd~ 185 (340)
...|..-++
T Consensus 244 ~~~~i~~~~~ 253 (302)
T 3s25_A 244 DNPALCVVKN 253 (302)
T ss_dssp SSCEEEEEET
T ss_pred CCcEEEEEEC
Confidence 345555555
No 333
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.91 E-value=2.6 Score=39.76 Aligned_cols=146 Identities=13% Similarity=0.016 Sum_probs=89.4
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMK 101 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd 101 (340)
..|.++.-..++. |.+|+.+| +..||..+.+....... ....|.++.. .++ .|..++.+ -+..+|
T Consensus 63 ~~i~~i~~d~~g~----------lWigT~~G-l~~yd~~~~~f~~~~~~-~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~ 127 (758)
T 3ott_A 63 TRIYCGVIIDNTY----------LYMGTDNG-ILVYNYRADRYEQPETD-FPTDVRTMAL-QGD-TLWLGALN-GLYTYQ 127 (758)
T ss_dssp SCEEEEEEETTTE----------EEEEETTE-EEEEETTTTEECCCSCC-CCSCEEEEEE-ETT-EEEEEETT-EEEEEE
T ss_pred ceEEEEEEcCCCc----------EEEEeCCC-eEEEeCCCCEEECcccC-CCceEEEEEe-cCC-cEEEEcCC-cceeEe
Confidence 4688877766666 77777766 78999887653321111 2335777754 344 56666666 688899
Q ss_pred CCCCeEEEEee----cCCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecC------CCCeEEEEECCCCCEEE
Q 036605 102 SEMGEVIREFK----ASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDD------VGPLQYVSASDGAKIII 171 (340)
Q Consensus 102 ~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~ 171 (340)
..+++...... .....|.++....++.+.+...+-+..|+..+++. ..+... ...|.++....++..|.
T Consensus 128 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lW 206 (758)
T 3ott_A 128 LQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVW 206 (758)
T ss_dssp TTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEE
T ss_pred CCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEE
Confidence 87765432201 12346888888888887776555588899877643 222111 12477888777666555
Q ss_pred EEEcCCCeEEEEEc
Q 036605 172 TAGYGEKHLQVWRC 185 (340)
Q Consensus 172 s~~~~d~~i~iwd~ 185 (340)
.+.. +-+..++.
T Consensus 207 igt~--~Gl~~~~~ 218 (758)
T 3ott_A 207 IGTE--GYLFQYFP 218 (758)
T ss_dssp EEEE--EEEEEEET
T ss_pred EEEC--CCCeEEcC
Confidence 4333 35667775
No 334
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.86 E-value=1.5 Score=36.63 Aligned_cols=181 Identities=9% Similarity=0.137 Sum_probs=109.5
Q ss_pred EEEEEc---CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeE
Q 036605 44 LLALGT---SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISS 120 (340)
Q Consensus 44 ~l~~g~---~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 120 (340)
++++-- .+..|.|.|+.++....+-.- .--+.-.+|..+.++.-. ...+.++|+++...+..+.-. ..|.-
T Consensus 38 yicVrE~~~~~~~VvIiDl~n~~~~~Rrpi----~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~Vvf 111 (365)
T 2xzh_A 38 FICIREKVGEQAQVVIIDMNDPSNPIRRPI----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTF 111 (365)
T ss_dssp EEEEEEEETTEEEEEEEETTSTTSCEEEEC----CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEE
T ss_pred eEEEEecCCCCCEEEEEECCCCCCcccccc----ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEE
Confidence 555532 334789999988764433221 111333488887777655 678999999999887776654 45666
Q ss_pred EEEccCCCEEEEecCcEEEEECCCC-ceeEEeecCC----CCeEEEEECCCCCEEEEEEcC------CCeEEEEEccCCC
Q 036605 121 SAFLCEEKIFALASSEVRILSLENG-EEVLKFSDDV----GPLQYVSASDGAKIIITAGYG------EKHLQVWRCDISS 189 (340)
Q Consensus 121 l~~~~~~~~l~~~~~~i~i~d~~~~-~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~~------d~~i~iwd~~~~~ 189 (340)
-.|-.+..+-++.+..|+.|++... .+..-|.-|. ..|..-..+++.++++..|-. .|.+.+|..+ .
T Consensus 112 WkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r 189 (365)
T 2xzh_A 112 WKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--R 189 (365)
T ss_dssp EEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--T
T ss_pred EEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--c
Confidence 6676666666667778999999753 3445554443 556777779999988776542 4778899972 2
Q ss_pred CCccCCceeeecCCCeeeeeecCCCCCCCC-EEEEEeC---CCcEEEEECCC
Q 036605 190 KTVNKGPALSMRHSPVAIDCKNSPNGEDGT-VILAVAE---SGVAYSWDLKT 237 (340)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~s~---dg~i~vwd~~~ 237 (340)
.....+. +|......+...- .+... .++.+.. .+++++-++..
T Consensus 190 -~~sQ~ie---Ghaa~F~~~~~~g-~~~~~~lf~fa~r~~~g~kLhIiEi~~ 236 (365)
T 2xzh_A 190 -KVSQPIE---GHAASFAQFKMEG-NAEESTLFCFAVRGQAGGKLHIIEVGT 236 (365)
T ss_dssp -TEEEEEC---CSEEEEEEECCTT-CSSCEEEEEEEEEETTEEEEEEEECSS
T ss_pred -cccceee---eeeeeeEEEecCC-CCCCceEEEEEEecCCCcEEEEEEcCC
Confidence 2222222 4444433331111 12222 3333322 26899999854
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.82 E-value=1.4 Score=36.33 Aligned_cols=122 Identities=7% Similarity=-0.014 Sum_probs=71.7
Q ss_pred CcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEe----CCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCC
Q 036605 52 GDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVG----TNGMASEMKSEMGEVIREFKASEKPISSSAFLCEE 127 (340)
Q Consensus 52 g~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~ 127 (340)
..|+..++..++.. .+.. . . +..|+++++.|+... ....|...++.... ...+..+.. .++++++
T Consensus 88 ~~Iy~i~~dg~~~~-~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGST-VLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCCE-EEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEET
T ss_pred CeEEEEeCCCCcce-Eeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEEC
Confidence 46777787766533 3332 1 2 236778899888776 34567777776443 344444332 4567888
Q ss_pred CEEEEec---CcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCC
Q 036605 128 KIFALAS---SEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISS 189 (340)
Q Consensus 128 ~~l~~~~---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~ 189 (340)
+.|+-.+ ..|...++..+.....+. +... ..+.|++.+|+-....++ -+|+.+++..
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~-~~I~~~~ldG 216 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRD-NAIVHVNINN 216 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGT-TEEEEECSSS
T ss_pred CEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCC-cEEEEEECCC
Confidence 8886543 338888887765433332 2222 345688999888766333 3455443344
No 336
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.75 E-value=1.7 Score=36.81 Aligned_cols=155 Identities=10% Similarity=0.003 Sum_probs=80.5
Q ss_pred CCeEEEEeecc----ccccccccCceEEEEEcC---C----CcEEEEEccCC-------eeE-EEecCCCCCCeEEEEEe
Q 036605 22 VSYSCLACGFV----GKKRRKERGTLLLALGTS---N----GDILAVDVLTG-------EMK-WKSTGRHPGGLAGLAFA 82 (340)
Q Consensus 22 ~~v~~l~~sp~----~~~~~~~~~~~~l~~g~~---d----g~i~i~d~~~~-------~~~-~~~~~~h~~~v~~v~~~ 82 (340)
.....|+|+|+ +. ++++-+. + ..|..|+...+ +.+ ..+..........++|.
T Consensus 73 ~g~~gia~~pdf~~~g~---------lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~ 143 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSW---------VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG 143 (354)
T ss_dssp CSEEEEEECTTTTTSCE---------EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC
T ss_pred CceeeEEeCCCCCcCCE---------EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC
Confidence 45788999997 34 3333332 3 56778887654 111 11221111124679999
Q ss_pred cCCCEEEEEeC-------------CCcEEEEeCCCCe-------EEEEeecCCCCeeEEEEcc-CCCEEEEecCc-----
Q 036605 83 KKGRSLHVVGT-------------NGMASEMKSEMGE-------VIREFKASEKPISSSAFLC-EEKIFALASSE----- 136 (340)
Q Consensus 83 ~~~~~l~s~~~-------------dg~i~~wd~~~~~-------~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~~----- 136 (340)
|||.++++.+. .|.|..++....- ....+.........++|+| ++.++++-.+.
T Consensus 144 pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~de 223 (354)
T 3a9g_A 144 PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDE 223 (354)
T ss_dssp TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCE
T ss_pred CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcE
Confidence 99976665432 2567777654320 0111221223357899999 67766662221
Q ss_pred EEEEECCC--------C--------ceeEEeecCCCCeEEEEEC-------CCCCEEEEEEcCCCeEEEEEcc
Q 036605 137 VRILSLEN--------G--------EEVLKFSDDVGPLQYVSAS-------DGAKIIITAGYGEKHLQVWRCD 186 (340)
Q Consensus 137 i~i~d~~~--------~--------~~~~~~~~~~~~v~~~~~s-------~~~~~l~s~~~~d~~i~iwd~~ 186 (340)
|.+..... + .++..+.........+.|. .+|.++++ ....+.|...++.
T Consensus 224 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~-~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 224 VNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIA-CLRGSMLAAVNFG 295 (354)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEE-ETTTTEEEEEEEC
T ss_pred EEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEE-EcCCCEEEEEEEC
Confidence 44432111 0 1122231122456778883 45655544 5547788877773
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.24 E-value=1.6 Score=36.63 Aligned_cols=120 Identities=12% Similarity=0.061 Sum_probs=53.7
Q ss_pred CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeC------CCcEEEEeC--CCCeEEEEeec---CCCCee
Q 036605 52 GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGT------NGMASEMKS--EMGEVIREFKA---SEKPIS 119 (340)
Q Consensus 52 g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~------dg~i~~wd~--~~~~~~~~~~~---~~~~i~ 119 (340)
..+.+||+.+.+....-.......- .+++.. +++.++.|+. ...+..||+ .+..- ..+.. ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W-~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKW-NKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEE-EECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcE-EecCCCCCCccccc
Confidence 5789999988764332111011111 233332 4555555553 235777876 43322 12211 111112
Q ss_pred EEEEccCCCEEEEec------------------------CcEEEEECCCCcee--EEeecCCCCeEEEEECCCCCEEEEE
Q 036605 120 SSAFLCEEKIFALAS------------------------SEVRILSLENGEEV--LKFSDDVGPLQYVSASDGAKIIITA 173 (340)
Q Consensus 120 ~l~~~~~~~~l~~~~------------------------~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~ 173 (340)
..+...++++++.++ .++.+||+.+.+-. ..+.........+. -+++.++.+
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~G 323 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLIIG 323 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEEe
Confidence 222334556666654 13789998876432 22222222222222 356777777
Q ss_pred Ec
Q 036605 174 GY 175 (340)
Q Consensus 174 ~~ 175 (340)
|.
T Consensus 324 G~ 325 (357)
T 2uvk_A 324 GE 325 (357)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 338
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.16 E-value=2.6 Score=36.64 Aligned_cols=182 Identities=11% Similarity=0.158 Sum_probs=109.7
Q ss_pred EEEEEc---CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeE
Q 036605 44 LLALGT---SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISS 120 (340)
Q Consensus 44 ~l~~g~---~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 120 (340)
++++-- .+..|.|.|+.++....+-.- .--+.-.+|..+.++.-. ...+.++|+++...+..+.-.+ .|.-
T Consensus 37 yicVrE~~~~~~~vvIiDl~~~~~~~rrpi----~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~Vvf 110 (494)
T 1bpo_A 37 FICIREKVGEQAQVVIIDMNDPSNPIRRPI----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTF 110 (494)
T ss_dssp EEEEEECCTTCCEEEEEETTSTTSCEEEEC----CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCE
T ss_pred eEEEEecCCCCCeEEEEECCCCCcceeccc----ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceE
Confidence 566543 334899999988764432221 112344578777777654 6799999999988877766544 4555
Q ss_pred EEEccCCCEEEEecCcEEEEECCCC-ceeEEeecCC----CCeEEEEECCCCCEEEEEEcC------CCeEEEEEccCCC
Q 036605 121 SAFLCEEKIFALASSEVRILSLENG-EEVLKFSDDV----GPLQYVSASDGAKIIITAGYG------EKHLQVWRCDISS 189 (340)
Q Consensus 121 l~~~~~~~~l~~~~~~i~i~d~~~~-~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~~------d~~i~iwd~~~~~ 189 (340)
-.|-.+..+-++.+..|+.|++... .+..-|.-|. ..|..-..+++.++++..|-. .|.+.+|..+ .
T Consensus 111 WkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r 188 (494)
T 1bpo_A 111 WKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--R 188 (494)
T ss_dssp EEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--T
T ss_pred EEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--c
Confidence 5666655555667777999999753 3445554443 557777779999998866542 4788899973 2
Q ss_pred CCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeC---CCcEEEEECCC
Q 036605 190 KTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAE---SGVAYSWDLKT 237 (340)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~---dg~i~vwd~~~ 237 (340)
.....+. +|......+...-.......++.+.. .++++|-++..
T Consensus 189 -~~sQ~ie---Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~ 235 (494)
T 1bpo_A 189 -KVSQPIE---GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (494)
T ss_dssp -CCEEEEC---CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSC
T ss_pred -cccchhe---eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCC
Confidence 2222222 44444433311111111223333333 27899999864
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.78 E-value=3.5 Score=38.48 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=75.1
Q ss_pred EEEEEcCC----CcEEEEEccCCeeEEEe-c---C-CCCCC-eEEEEEec-CCCEEEEEeCC------CcEEEEeCCCCe
Q 036605 44 LLALGTSN----GDILAVDVLTGEMKWKS-T---G-RHPGG-LAGLAFAK-KGRSLHVVGTN------GMASEMKSEMGE 106 (340)
Q Consensus 44 ~l~~g~~d----g~i~i~d~~~~~~~~~~-~---~-~h~~~-v~~v~~~~-~~~~l~s~~~d------g~i~~wd~~~~~ 106 (340)
+++.|+.+ ..+.+||..+++....- . + ..... -.+++..+ ++..++.||.+ ..+.+||+.+..
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~ 479 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE 479 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc
Confidence 67777643 46889999888644322 1 0 01111 12333333 56666777644 357889988754
Q ss_pred EEEE--eecCCCCeeEEEEccCCCEEEEecC----cEEEEECCCCceeEE-----eecCCCCeEEEEECCC-CCEEEEEE
Q 036605 107 VIRE--FKASEKPISSSAFLCEEKIFALASS----EVRILSLENGEEVLK-----FSDDVGPLQYVSASDG-AKIIITAG 174 (340)
Q Consensus 107 ~~~~--~~~~~~~i~~l~~~~~~~~l~~~~~----~i~i~d~~~~~~~~~-----~~~~~~~v~~~~~s~~-~~~l~s~~ 174 (340)
-... +.... .-.+.+...++++++.++. ++.+||..+..-... ..........+.+..+ ++.++.+|
T Consensus 480 W~~~~~~p~~R-~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 480 WSMIKSLSHTR-FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp EEECCCCSBCC-BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECC
T ss_pred EEECCCCCCCc-ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECC
Confidence 3221 11111 1123344347777777654 599999988743211 1111122233555554 55666655
Q ss_pred cC------CCeEEEEEcc
Q 036605 175 YG------EKHLQVWRCD 186 (340)
Q Consensus 175 ~~------d~~i~iwd~~ 186 (340)
.. -..+.+||+.
T Consensus 559 ~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 559 GFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp BCTTSSCBCCEEEEEEEC
T ss_pred cCCCCCeeeCcEEEEEcc
Confidence 42 1457888873
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.66 E-value=2.3 Score=35.78 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=62.0
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEE--Ee----ecCCCCeeEEEEccC---CCEE-EE----ecCcEE
Q 036605 73 PGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIR--EF----KASEKPISSSAFLCE---EKIF-AL----ASSEVR 138 (340)
Q Consensus 73 ~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~--~~----~~~~~~i~~l~~~~~---~~~l-~~----~~~~i~ 138 (340)
-.....|+|.|+|..+++--..|.|++++..++.... .+ .........|+++|+ ...| ++ ....|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3467899999999876664448999999876665422 11 123456789999995 3344 33 122366
Q ss_pred EEECCCC----------cee-EEee-cCCCCeEEEEECCCCCEEEEEE
Q 036605 139 ILSLENG----------EEV-LKFS-DDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 139 i~d~~~~----------~~~-~~~~-~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
-|.+..+ +.+ ..+. ........|.|.|||...++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 6665541 111 1221 1112346799999997777654
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.36 E-value=1.4 Score=39.53 Aligned_cols=108 Identities=11% Similarity=0.068 Sum_probs=66.2
Q ss_pred CeeEEEEccCCCEEEEecCc---EEEEECCCCce-------------eEEeecCCCCeEEEEECCCCCEEEEEEcCCCeE
Q 036605 117 PISSSAFLCEEKIFALASSE---VRILSLENGEE-------------VLKFSDDVGPLQYVSASDGAKIIITAGYGEKHL 180 (340)
Q Consensus 117 ~i~~l~~~~~~~~l~~~~~~---i~i~d~~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i 180 (340)
..+.+.++|||+++++++.- +.++|++.... ..... -.-.....+|.++| +.+++-.-|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeecceE
Confidence 44678899999999886543 99999874211 12222 22456789999999 677767669999
Q ss_pred EEEEccCC----CCCccCCc--eeeecCCCeeeeeecCC-CCCCCCEEEEEeC
Q 036605 181 QVWRCDIS----SKTVNKGP--ALSMRHSPVAIDCKNSP-NGEDGTVILAVAE 226 (340)
Q Consensus 181 ~iwd~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~l~~~s~ 226 (340)
.-|++... .++....+ .+.+...+......-.. ..++|.+|++...
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 99999522 12222111 12333444333331111 1688899888754
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.85 E-value=2.2 Score=34.80 Aligned_cols=172 Identities=8% Similarity=0.018 Sum_probs=80.5
Q ss_pred CCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEE
Q 036605 51 NGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIF 130 (340)
Q Consensus 51 dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 130 (340)
||.|+.|-......+-.-.. -...|..++.-. ...+.-. ||.|+.|-....-.+..-......|..++.......+
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~-~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~ 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAE-ARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGG-GSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE
T ss_pred CCEEEEeeCCCCCCCCCCcc-cCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE
Confidence 78888886443211100000 123566666543 2333334 8888888644311111111112345555554444333
Q ss_pred EEecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCccCCceeeecCCCeeeeee
Q 036605 131 ALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTVNKGPALSMRHSPVAIDCK 210 (340)
Q Consensus 131 ~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (340)
++ ++.|+.|-......+..-......|..++..... .+.- . |+.|..|=.+. .++. .... .....+..+.
T Consensus 156 l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h--s~al-~-~G~v~~wG~n~-~gql-g~p~---~~~~~v~~i~ 225 (282)
T 3qhy_B 156 VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH--SLAL-K-DGKVIAWGDNR-YKQT-TVPT---EALSGVSAIA 225 (282)
T ss_dssp EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEE-E-TTEEEEEECCT-TSTT-CCCG---GGGSSCCEEE
T ss_pred EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE--EEEE-E-CCeEEEEECCC-CCCC-CCCc---ccCCCceEEE
Confidence 44 6778877654321111000112456777665443 3333 4 89999997631 1222 1111 1111233331
Q ss_pred cCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 211 NSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 211 ~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
+. ..+.++.. ||.|+.|-.....++.
T Consensus 226 ~G-----~~h~~al~-~g~v~~wG~n~~gq~~ 251 (282)
T 3qhy_B 226 SG-----EWYSLALK-NGKVIAWGSSRTAPSS 251 (282)
T ss_dssp EC-----SSCEEEEE-TTEEEEESTTCCCCGG
T ss_pred cC-----CCEEEEEE-CCEEEEecCCCCcccc
Confidence 11 22334444 9999999776655444
No 343
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.73 E-value=1.3 Score=37.41 Aligned_cols=99 Identities=10% Similarity=0.078 Sum_probs=57.3
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEe-------ecCCCCeeEEEEccC---CCEEEEe----------c
Q 036605 75 GLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREF-------KASEKPISSSAFLCE---EKIFALA----------S 134 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-------~~~~~~i~~l~~~~~---~~~l~~~----------~ 134 (340)
....|+|.|+|+.|+.+...|.|++++.. +.....+ .........|+++|+ +..|++. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46899999999845556778999999853 4322111 112345689999996 4444332 1
Q ss_pred CcEEEEECCCC--c--eeEE-eec------CCCCeEEEEECCCCCEEEEEE
Q 036605 135 SEVRILSLENG--E--EVLK-FSD------DVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 135 ~~i~i~d~~~~--~--~~~~-~~~------~~~~v~~~~~s~~~~~l~s~~ 174 (340)
..|..|++... . .... +.. .......+.|.|||...++.+
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 23666766432 1 1111 111 111235799999996555543
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.69 E-value=6.8 Score=39.66 Aligned_cols=136 Identities=8% Similarity=0.137 Sum_probs=86.3
Q ss_pred EEEEEc---CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeE
Q 036605 44 LLALGT---SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISS 120 (340)
Q Consensus 44 ~l~~g~---~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 120 (340)
++++-- ....|.|.|+.++..+.+-. -.--+.-.+|..+.++.-. ...+.++|+.+...+..+... .+|.-
T Consensus 37 yicvre~~~~~~~vvIidl~~~~~~~rrp----i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~Vvf 110 (1630)
T 1xi4_A 37 FICIREKVGEQAQVVIIDMNDPSNPIRRP----ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTF 110 (1630)
T ss_pred eEEEEecCCCCceEEEEECCCCCCccccc----ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceE
Confidence 565532 33479999998876442211 1122333577676666544 679999999887766555443 34555
Q ss_pred EEEccCCCEEEEecCcEEEEECCCC-ceeEEeecC----CCCeEEEEECCCCCEEEEEEcC------CCeEEEEEc
Q 036605 121 SAFLCEEKIFALASSEVRILSLENG-EEVLKFSDD----VGPLQYVSASDGAKIIITAGYG------EKHLQVWRC 185 (340)
Q Consensus 121 l~~~~~~~~l~~~~~~i~i~d~~~~-~~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~~------d~~i~iwd~ 185 (340)
-.|-.+..+-++.+..|+.|++... .+..-|.-| ...|..-..+++.++++..|-. .|.+.+|..
T Consensus 111 WkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~ 186 (1630)
T 1xi4_A 111 WKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (1630)
T ss_pred EEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeec
Confidence 5566555555667777999999643 233333333 3567777789999988866542 588899997
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.08 E-value=4.1 Score=33.09 Aligned_cols=188 Identities=12% Similarity=0.063 Sum_probs=94.9
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKS 102 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~ 102 (340)
.|..++..... .++. . ||.|+.|-......+. +.......|..++..... .++. . ||.|+.|-.
T Consensus 25 ~i~~ia~G~~h----------~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~ 88 (282)
T 3qhy_B 25 GVDAIAGGYFH----------GLAL-K-GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGG 88 (282)
T ss_dssp SCCEEEECSSE----------EEEE-E-TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEEC
T ss_pred CCcEEEeCCCe----------EEEE-E-CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeC
Confidence 56666654322 2444 4 8999999754322111 010022356677654322 2333 4 889999865
Q ss_pred CCCeEEEEeecCCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEE
Q 036605 103 EMGEVIREFKASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQV 182 (340)
Q Consensus 103 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~i 182 (340)
...-.+..-..-...|..++.......+++ ++.|+.|=....-.+-.-......|..++.......+ -. |+.|..
T Consensus 89 n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~---l~-~G~v~~ 163 (282)
T 3qhy_B 89 NEDGQTTVPAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA---VK-NGGVIA 163 (282)
T ss_dssp CTTSTTCCCGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE---EE-TTEEEE
T ss_pred CCCCCCCCCcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE---EE-CCEEEE
Confidence 432111110111235777777766666677 8889988754322111111122456677664443222 23 789999
Q ss_pred EEccCCCCCccCCceeeecCCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCccC
Q 036605 183 WRCDISSKTVNKGPALSMRHSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQDE 242 (340)
Q Consensus 183 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~~~ 242 (340)
|-.. ...+..... .....+..+.+.. .+.++. .||.|+.|-.....++.
T Consensus 164 wG~n--~~gqlg~p~---~~~~~v~~i~~G~-----~hs~al-~~G~v~~wG~n~~gqlg 212 (282)
T 3qhy_B 164 WGDN--YFGQTTVPA---EAQSGVDDVAGGI-----FHSLAL-KDGKVIAWGDNRYKQTT 212 (282)
T ss_dssp EECC--TTSTTSCCG---GGGSSEEEEEECS-----SEEEEE-ETTEEEEEECCTTSTTC
T ss_pred ecCC--CCCCCCCce---ecCCCeEEEEecC-----CEEEEE-ECCeEEEEECCCCCCCC
Confidence 8763 211121111 1122344442222 333444 69999999877655544
No 346
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.07 E-value=5.9 Score=34.79 Aligned_cols=101 Identities=13% Similarity=0.138 Sum_probs=60.6
Q ss_pred CCeEEEEEecCCCEEEEEeCC-CcEEEEeCCCCeEEE--Eeec------CCCCeeEEEEccC---CCEE-EEec------
Q 036605 74 GGLAGLAFAKKGRSLHVVGTN-GMASEMKSEMGEVIR--EFKA------SEKPISSSAFLCE---EKIF-ALAS------ 134 (340)
Q Consensus 74 ~~v~~v~~~~~~~~l~s~~~d-g~i~~wd~~~~~~~~--~~~~------~~~~i~~l~~~~~---~~~l-~~~~------ 134 (340)
.....|+|.|+|+.+++ ... +.|.+++..++.... .+.. ....+..|+++|+ +..| ++-.
T Consensus 27 ~~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 35679999999986665 455 579998876565322 2221 2345679999995 4444 3321
Q ss_pred --------CcEEEEECCCC-------ceeE-Eeec-CCCCeEEEEECCCCCEEEEEEc
Q 036605 135 --------SEVRILSLENG-------EEVL-KFSD-DVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 135 --------~~i~i~d~~~~-------~~~~-~~~~-~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
..|.-|++..+ +.+. .+.. .......|+|.|||...++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 13655655322 1121 1221 1234688999999987777554
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.00 E-value=7.9 Score=36.12 Aligned_cols=141 Identities=13% Similarity=0.023 Sum_probs=74.4
Q ss_pred EEEEEcCC------CcEEEEEccCCeeEEEecCCCCCCe-EEEEEecCCCEEEEEeCCC--cEEEEeCCCCeEEEEe---
Q 036605 44 LLALGTSN------GDILAVDVLTGEMKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTNG--MASEMKSEMGEVIREF--- 111 (340)
Q Consensus 44 ~l~~g~~d------g~i~i~d~~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~--- 111 (340)
+++.|+.+ ..+.+||..+.+.... ........ .+.+...++..++.||.++ .+.+||+.+..-...-
T Consensus 454 lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~-~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g 532 (695)
T 2zwa_A 454 LLLIGGRKAPHQGLSDNWIFDMKTREWSMI-KSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKD 532 (695)
T ss_dssp EEEECCBSSTTCBCCCCEEEETTTTEEEEC-CCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSS
T ss_pred EEEEcCCCCCCCccccEEEEeCCCCcEEEC-CCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCC
Confidence 77777644 3588999888754322 11011111 2233323677778877654 7899999886532221
Q ss_pred --ecCCCCeeEEEEccC-CCEEEEecC---------cEEEEECCCCce-----eEEeec---CCCCeEEEEECCCCCEEE
Q 036605 112 --KASEKPISSSAFLCE-EKIFALASS---------EVRILSLENGEE-----VLKFSD---DVGPLQYVSASDGAKIII 171 (340)
Q Consensus 112 --~~~~~~i~~l~~~~~-~~~l~~~~~---------~i~i~d~~~~~~-----~~~~~~---~~~~v~~~~~s~~~~~l~ 171 (340)
........++.+..+ +++++.++. ++.+||+.+... -..+.. ....-..+....++..++
T Consensus 533 ~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 533 EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEE
T ss_pred CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEE
Confidence 111222233555655 555565543 289999988761 122211 111112233333366666
Q ss_pred EEEcC-------CCeEEEEEc
Q 036605 172 TAGYG-------EKHLQVWRC 185 (340)
Q Consensus 172 s~~~~-------d~~i~iwd~ 185 (340)
.||.. ...+.+||+
T Consensus 613 ~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 613 VGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp ECCBCSSCCCCTTTSEEEEET
T ss_pred ECCccCCCCCCCCCeEEEEEC
Confidence 66642 345888887
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.81 E-value=8.6 Score=36.16 Aligned_cols=136 Identities=11% Similarity=0.042 Sum_probs=84.0
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecCC-C----CCCeEEEEEecCCCEEEEEeCCCc
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGR-H----PGGLAGLAFAKKGRSLHVVGTNGM 96 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~-h----~~~v~~v~~~~~~~~l~s~~~dg~ 96 (340)
..|.++....++. |.+|+.+| |..|+..+++.. .+... . ...|.++...+++..|..|.. +-
T Consensus 146 ~~i~~i~~d~~g~----------lWigt~~G-l~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 146 NTIYSIIRTKDNQ----------IYVGTYNG-LCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp SCEEEEEECTTCC----------EEEEETTE-EEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred CeEEEEEEcCCCC----------EEEEeCCC-HhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 4577777776677 55566554 778888776543 22210 1 224888888877776666664 45
Q ss_pred EEEEeCCCCeEEEEeecCCCCeeEEEEccCCCEEEEecCcEEEEECCCCceeEEeec--------CCCCeEEEEECCCCC
Q 036605 97 ASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSD--------DVGPLQYVSASDGAK 168 (340)
Q Consensus 97 i~~wd~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~s~~~~ 168 (340)
+..+|..+++...........|.++....+|.+.+...+-+.+++..+++. ..+.. ....|.++....+|.
T Consensus 213 l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~ 291 (758)
T 3ott_A 213 LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDNGLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHN 291 (758)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETTEEEEECCTTSCC-EEECCCTTCTTSCSCSCEEEEEECTTCC
T ss_pred CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCCceeEEecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCC
Confidence 888998877543221112335788888888888776655588888776533 22211 124578887777775
Q ss_pred EEE
Q 036605 169 III 171 (340)
Q Consensus 169 ~l~ 171 (340)
.-+
T Consensus 292 lWi 294 (758)
T 3ott_A 292 IWL 294 (758)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.02 E-value=8.6 Score=34.66 Aligned_cols=188 Identities=10% Similarity=0.106 Sum_probs=107.5
Q ss_pred EEEEEc-CCCcEEEEEccCCeeEEEecCCCCCCeEEEEEe--cCCCEEEEEeCC-------CcEE------------EEe
Q 036605 44 LLALGT-SNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFA--KKGRSLHVVGTN-------GMAS------------EMK 101 (340)
Q Consensus 44 ~l~~g~-~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d-------g~i~------------~wd 101 (340)
+|+.-. .+..|-..++...+....+.-.....+.+++|. |+..+++.++.. |... ..|
T Consensus 144 ylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD 223 (638)
T 3sbq_A 144 YLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAID 223 (638)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEE
T ss_pred EEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEc
Confidence 777655 456788888888876655554466788899986 677788876643 2211 112
Q ss_pred CCCCeEEEEeecCCCCeeEEEEccCCCEEEEecC----------------c-EEEEEC----------------------
Q 036605 102 SEMGEVIREFKASEKPISSSAFLCEEKIFALASS----------------E-VRILSL---------------------- 142 (340)
Q Consensus 102 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~----------------~-i~i~d~---------------------- 142 (340)
..+.+....+.. ..........+++.+.++... + +.++++
T Consensus 224 ~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~V 302 (638)
T 3sbq_A 224 AETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPV 302 (638)
T ss_dssp TTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCE
T ss_pred CCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeE
Confidence 222222222111 112233445666777655211 1 555554
Q ss_pred ---CC----CceeEEeecCCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCC----CCc--c-CC--ceeeecCCCee
Q 036605 143 ---EN----GEEVLKFSDDVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISS----KTV--N-KG--PALSMRHSPVA 206 (340)
Q Consensus 143 ---~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~----~~~--~-~~--~~~~~~~~~~~ 206 (340)
+. +..+..+..-......+.++|||+|++.++..+.++.|+|++.-. .+. . .. ....++-.+..
T Consensus 303 iD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlH 382 (638)
T 3sbq_A 303 LDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLH 382 (638)
T ss_dssp EECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEE
T ss_pred EccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccE
Confidence 22 111111111223456778899999999999889999999984110 011 0 00 01122444444
Q ss_pred eeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 207 IDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
..+ .++|....+..-|..|.-|++..
T Consensus 383 t~F-----d~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 383 TTF-----DGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEE-----CSSSEEEEEETTTTEEEEEEHHH
T ss_pred EEE-----CCCCceEeeeeecceEEEEeccH
Confidence 444 78887677777999999999875
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.55 E-value=12 Score=32.88 Aligned_cols=103 Identities=15% Similarity=0.011 Sum_probs=59.5
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe---eEEEecC--------CCCCCeEEEEEecC---CCE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE---MKWKSTG--------RHPGGLAGLAFAKK---GRS 87 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~---~~~~~~~--------~h~~~v~~v~~~~~---~~~ 87 (340)
..-+.|+|.|++.. .|+++...|.|++++..... .+..+.. ...+....|+|+|+ ...
T Consensus 14 ~~P~~~a~~pdG~~--------rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 14 RQPVGALHSGDGSQ--------RLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp SSEEEEECCSSSSC--------CEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred CCceEEEECCCCCe--------EEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 34578999999820 26666788999999754221 1222211 02457899999996 334
Q ss_pred EEEE-eC--C----------CcEEEEeCCC----------CeEEEEee--cCCCCeeEEEEccCCCEEEE
Q 036605 88 LHVV-GT--N----------GMASEMKSEM----------GEVIREFK--ASEKPISSSAFLCEEKIFAL 132 (340)
Q Consensus 88 l~s~-~~--d----------g~i~~wd~~~----------~~~~~~~~--~~~~~i~~l~~~~~~~~l~~ 132 (340)
|+.. +. + ..|.-|.+.. .+.+..+. ........|+|.|||.+.++
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEE
Confidence 4443 21 1 1455565532 12333332 12234678999999987766
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.48 E-value=12 Score=32.95 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=60.0
Q ss_pred CeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCe---EEEEee---------cCCCCeeEEEEccC----CCEEEE-e---
Q 036605 75 GLAGLAFAKKGR-SLHVVGTNGMASEMKSEMGE---VIREFK---------ASEKPISSSAFLCE----EKIFAL-A--- 133 (340)
Q Consensus 75 ~v~~v~~~~~~~-~l~s~~~dg~i~~wd~~~~~---~~~~~~---------~~~~~i~~l~~~~~----~~~l~~-~--- 133 (340)
.-..|+|.|++. .|+++...|.|++++..... .+..+. ........|+++|+ +.+.++ .
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 457899999996 56666889999999754321 122211 11456788999996 333333 1
Q ss_pred c----------CcEEEEECCC----------CceeEEee--cCCCCeEEEEECCCCCEEEEEEc
Q 036605 134 S----------SEVRILSLEN----------GEEVLKFS--DDVGPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 134 ~----------~~i~i~d~~~----------~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~ 175 (340)
+ ..|.-|.+.. .+.+..+. ........|+|.|||.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1244455532 12233332 12234678999999987777665
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.85 E-value=17 Score=35.29 Aligned_cols=38 Identities=5% Similarity=0.102 Sum_probs=33.0
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 036605 75 GLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFK 112 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 112 (340)
.+.+++..++..++++.+.|+++++|++.+++.+....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777888888899999999999999999999887643
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.46 E-value=5.8 Score=35.80 Aligned_cols=62 Identities=24% Similarity=0.293 Sum_probs=42.0
Q ss_pred CCeEEEEeeccccccccccCceEEE-EEcC-----------CCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEE
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLA-LGTS-----------NGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLH 89 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~-~g~~-----------dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 89 (340)
.....|.|.++|. +.+ +-.. ...|+.++..++++...+.......++.++|+||++.|+
T Consensus 476 nsPDnL~fd~~G~---------LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 476 NSPDGLGFDKAGR---------LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CCEEEEEECTTCC---------EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCCCceEECCCCC---------EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 3456788888887 444 2111 125777787788766555442345789999999999988
Q ss_pred EEe
Q 036605 90 VVG 92 (340)
Q Consensus 90 s~~ 92 (340)
++-
T Consensus 547 V~v 549 (592)
T 4a9v_A 547 VGI 549 (592)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=81.08 E-value=4.7 Score=36.65 Aligned_cols=59 Identities=25% Similarity=0.362 Sum_probs=42.1
Q ss_pred eEEEEeeccccccccccCceEEEEEcC------------CCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEE
Q 036605 24 YSCLACGFVGKKRRKERGTLLLALGTS------------NGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVV 91 (340)
Q Consensus 24 v~~l~~sp~~~~~~~~~~~~~l~~g~~------------dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 91 (340)
.--|+|+|.|. +++.-.. +..+.+++..+++....+...-...++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~---------LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR---------LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC---------EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC---------EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45688999888 4443221 12467777788887766666455789999999999988875
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.86 E-value=16 Score=36.37 Aligned_cols=38 Identities=5% Similarity=0.102 Sum_probs=31.9
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEee
Q 036605 75 GLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFK 112 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 112 (340)
.+.+++..++..++++-+.|+++++|++.+++.+....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566667788899999999999999999999887754
No 356
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=73.82 E-value=2 Score=36.06 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=47.1
Q ss_pred EEEEE-cCCCcEEEEEccCCeeEEEecC---CCCCCeEE---EEE-e----cCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 036605 44 LLALG-TSNGDILAVDVLTGEMKWKSTG---RHPGGLAG---LAF-A----KKGRSLHVVGTNGMASEMKSEMGEVIREF 111 (340)
Q Consensus 44 ~l~~g-~~dg~i~i~d~~~~~~~~~~~~---~h~~~v~~---v~~-~----~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 111 (340)
.++.. +.||.|+.++..+|...+.+.- ....++.. ... . ..+..+++++.+|.+...|+.+|+.+..+
T Consensus 58 ~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 58 TLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp EEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 34443 6899999999998876655432 01122221 000 0 14568899999999999999999999887
Q ss_pred ec
Q 036605 112 KA 113 (340)
Q Consensus 112 ~~ 113 (340)
..
T Consensus 138 ~~ 139 (339)
T 2be1_A 138 GP 139 (339)
T ss_dssp ST
T ss_pred ec
Confidence 64
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=71.33 E-value=27 Score=31.59 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=31.1
Q ss_pred CeEEEEEecCCCEEEEEeCC------------CcEEEEeCCCCeEEEEeecC-CCCeeEEEEccCCCEEEE
Q 036605 75 GLAGLAFAKKGRSLHVVGTN------------GMASEMKSEMGEVIREFKAS-EKPISSSAFLCEEKIFAL 132 (340)
Q Consensus 75 ~v~~v~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~ 132 (340)
....|.|+++|.+.+..... ..|..++..+++....+... ...++.++|+||++.|++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 45678888888766633221 13455555555544433322 234566666666665544
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=69.05 E-value=19 Score=32.74 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=41.8
Q ss_pred eeEEEEccCCCEEEEecCc--------------EEEEECCCCceeEEeecCC-CCeEEEEECCCCCEEEEEEc
Q 036605 118 ISSSAFLCEEKIFALASSE--------------VRILSLENGEEVLKFSDDV-GPLQYVSASDGAKIIITAGY 175 (340)
Q Consensus 118 i~~l~~~~~~~~l~~~~~~--------------i~i~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~ 175 (340)
.--|+|+|.|.+++..|+. +.+.+..+++..+-+..+. ..++.++|+||++.|++...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 3568999999988885542 5666777776554444443 56899999999998887544
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=57.73 E-value=17 Score=35.29 Aligned_cols=38 Identities=8% Similarity=-0.058 Sum_probs=32.0
Q ss_pred CCeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEe
Q 036605 22 VSYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKS 68 (340)
Q Consensus 22 ~~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 68 (340)
..+.+++..++.. ++++-+.|+++++|++.+++++...
T Consensus 236 ~~~~~~~~~~~~~---------~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYN---------VLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTT---------EEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCc---------EEEEEECCCEEEEEECCCCCeEeee
Confidence 3567777777777 8999999999999999999877664
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=56.15 E-value=94 Score=26.41 Aligned_cols=160 Identities=11% Similarity=0.066 Sum_probs=87.4
Q ss_pred cEEEEEccCC--eeEEEecC-----CCCCCeEEEEEe---cC----CCEEEEEe-CCCcEEEEeCCCCeEEEEeecCCCC
Q 036605 53 DILAVDVLTG--EMKWKSTG-----RHPGGLAGLAFA---KK----GRSLHVVG-TNGMASEMKSEMGEVIREFKASEKP 117 (340)
Q Consensus 53 ~i~i~d~~~~--~~~~~~~~-----~h~~~v~~v~~~---~~----~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~ 117 (340)
.|.+||+.++ +.++++.- .....+..+++. |+ +.+++... ..+.|.|+|+.+++..+... ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~--~~- 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH--PT- 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC--GG-
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc--CC-
Confidence 6889999999 88877643 123457888888 22 34556555 35789999999998765542 11
Q ss_pred eeEEEEccCCCEEEEecCcEEEEECCCCceeEEeecCCCCeEEEEECCC----CCEEEEEEcCCCeEEEEEccCC---CC
Q 036605 118 ISSSAFLCEEKIFALASSEVRILSLENGEEVLKFSDDVGPLQYVSASDG----AKIIITAGYGEKHLQVWRCDIS---SK 190 (340)
Q Consensus 118 i~~l~~~~~~~~l~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~s~~~~d~~i~iwd~~~~---~~ 190 (340)
+.|+....+..++.-.- + ...+..++++|+ ++.|+..... .-++|.+... ..
T Consensus 201 -----~~pd~~~~~~i~G~~~~-----------~---~~Gi~gIaLsp~~~~~~~~LYf~pls--s~~ly~V~T~~L~~~ 259 (381)
T 3q6k_A 201 -----FKAERPTKFDYGGKEYE-----------F---KAGIFGITLGDRDSEGNRPAYYLAGS--AIKVYSVNTKELKQK 259 (381)
T ss_dssp -----GSCCSCEEEEETTEEEE-----------E---CCCEEEEEECCCCTTSCCEEEEEESS--CSEEEEEEHHHHSST
T ss_pred -----CccccCcceEECCEEeE-----------e---ccCceEEEecCCcCCCCeEEEEEECC--CCcEEEEEHHHhhCc
Confidence 34542222232332111 1 245889999998 7888886662 2345555211 11
Q ss_pred CccCCceeeecCCC-eeeeeecCCCCCCCCEEEEEeCCCcEEEEECCC
Q 036605 191 TVNKGPALSMRHSP-VAIDCKNSPNGEDGTVILAVAESGVAYSWDLKT 237 (340)
Q Consensus 191 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~ 237 (340)
.....+. .++..+ ............+|..+++--..+.|..|+...
T Consensus 260 ~~~~~v~-~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 260 GGKLNPE-LLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TCCCCCE-EEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred chhhceE-EeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 1111111 111111 000000011124666667777777888898754
No 361
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=52.58 E-value=1.1e+02 Score=25.93 Aligned_cols=192 Identities=10% Similarity=0.072 Sum_probs=95.6
Q ss_pred EEEEEcCCCcEEEEEccCC-----------eeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-------
Q 036605 44 LLALGTSNGDILAVDVLTG-----------EMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMG------- 105 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~-----------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~------- 105 (340)
..++-..||.|+.|-.... .....+.......+..++.+......+....||.|+.|-....
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~ 143 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 143 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCC
Confidence 4555567899999963321 1111222212234556677666667777788999999954320
Q ss_pred ----eEEEEeec-CCCCeeEEEEccCCCEEEEecCcEEEEECCCC-c----------eeEEeec-CCCCeEEEEECCCCC
Q 036605 106 ----EVIREFKA-SEKPISSSAFLCEEKIFALASSEVRILSLENG-E----------EVLKFSD-DVGPLQYVSASDGAK 168 (340)
Q Consensus 106 ----~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~~i~i~d~~~~-~----------~~~~~~~-~~~~v~~~~~s~~~~ 168 (340)
.....+.. ....|..++.......+++.++.|+.|=.... + ....+.. ....|..++......
T Consensus 144 ~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~ 223 (389)
T 3kci_A 144 RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 223 (389)
T ss_dssp CCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSC
T ss_pred CccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCc
Confidence 11111221 12245566655444444556677888864221 0 0111111 123566666644333
Q ss_pred EEEEEEcCCCeEEEEEccCCCCCccC----Ccee--eec--CCCeeeeeecCCCCCCCCEEEEEeCCCcEEEEECCCCCc
Q 036605 169 IIITAGYGEKHLQVWRCDISSKTVNK----GPAL--SMR--HSPVAIDCKNSPNGEDGTVILAVAESGVAYSWDLKTVSQ 240 (340)
Q Consensus 169 ~l~s~~~~d~~i~iwd~~~~~~~~~~----~~~~--~~~--~~~~~~~~~~~~~~~~~~~l~~~s~dg~i~vwd~~~~~~ 240 (340)
+.++... ++.|..|-... .++.-. .... .+. ....+..+ .....+.++...+|.|+.|-.....+
T Consensus 224 ~t~~l~~-~G~v~~wG~n~-~GqLG~g~~~~~~~p~~v~~~~~~~v~~v-----~~G~~hs~alt~~G~v~~wG~n~~Gq 296 (389)
T 3kci_A 224 QTLCLTD-DDTVWSWGDGD-YGKLGRGGSDGCKVPMKIDSLTGLGVVKV-----ECGSQFSVALTKSGAVYTWGKGDYHR 296 (389)
T ss_dssp EEEEEET-TTEEEEEECCG-GGTTSSSSCCCEEEEEECGGGTTSCEEEE-----EEETTEEEEEETTSCEEEEECCGGGT
T ss_pred EEEEEcc-CCEEEEEeCCC-CCCCCCCCCCCccccEEecccCCCcEEEE-----eCCCCEEEEEeCCCeEEEEeCCCCCC
Confidence 4444455 89999997531 111100 0000 001 01113333 12234566668899999998766444
Q ss_pred cC
Q 036605 241 DE 242 (340)
Q Consensus 241 ~~ 242 (340)
+.
T Consensus 297 LG 298 (389)
T 3kci_A 297 LG 298 (389)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 362
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=49.01 E-value=60 Score=29.15 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=44.3
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCe----eEEEecC-CCCCCeE-EEEEecCCCEEEEEeCCCc
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGE----MKWKSTG-RHPGGLA-GLAFAKKGRSLHVVGTNGM 96 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~----~~~~~~~-~h~~~v~-~v~~~~~~~~l~s~~~dg~ 96 (340)
..+.++....+. ...++.|+.+|.|.-..+..+. ....+.- ....+|. .+.+++++..|+.++.++.
T Consensus 401 ~lT~vav~~~~~-------~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V 473 (539)
T 3al9_A 401 RLTSVASYVYNG-------YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQV 473 (539)
T ss_dssp CEEEEEEEEETT-------EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEE
T ss_pred ceEEEEeeccCC-------eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccc
Confidence 466666654331 2388899999998766554321 2222221 1245775 8999999999999877754
Q ss_pred EEE
Q 036605 97 ASE 99 (340)
Q Consensus 97 i~~ 99 (340)
+++
T Consensus 474 ~kv 476 (539)
T 3al9_A 474 TRV 476 (539)
T ss_dssp EEE
T ss_pred cee
Confidence 444
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.09 E-value=40 Score=31.40 Aligned_cols=36 Identities=17% Similarity=0.153 Sum_probs=29.3
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeec
Q 036605 76 LAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKA 113 (340)
Q Consensus 76 v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~ 113 (340)
|.++.+ +..++++-+.|.++++|++.+++.+.....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 454444 478999999999999999999998877654
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.08 E-value=22 Score=35.32 Aligned_cols=37 Identities=8% Similarity=-0.040 Sum_probs=29.5
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEe
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKS 68 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 68 (340)
.+.+++..++.. ++++-+.|+++++|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~---------~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYN---------VLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTT---------EEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCcc---------EEEEEeCCCEEEEEECCCCCeEEee
Confidence 344555566667 8999999999999999999877664
No 365
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=43.78 E-value=86 Score=27.75 Aligned_cols=57 Identities=25% Similarity=0.341 Sum_probs=38.1
Q ss_pred eEEEEEcCCCcEEEEEccCCe--------eEEEecC-CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 43 LLLALGTSNGDILAVDVLTGE--------MKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 43 ~~l~~g~~dg~i~i~d~~~~~--------~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
..++.|+.+|.|.-.-+.... .+..+.- ....+|..+.++++...|+.++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 478899999988655433211 1222221 13568999999999999999888876554
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.85 E-value=39 Score=31.50 Aligned_cols=26 Identities=15% Similarity=0.013 Sum_probs=23.0
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEec
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKST 69 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~ 69 (340)
++++-+.|.++++||+.+++++....
T Consensus 233 fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 233 YLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCeEEEEEcCCCceEEeec
Confidence 89999999999999999998776554
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=37.18 E-value=1.8e+02 Score=24.28 Aligned_cols=51 Identities=8% Similarity=-0.031 Sum_probs=28.1
Q ss_pred EEEEEcCCCcEEEEEccC-CeeEEEe-cCCCCCCeEEEEEec-CCCEEEEEeCCC
Q 036605 44 LLALGTSNGDILAVDVLT-GEMKWKS-TGRHPGGLAGLAFAK-KGRSLHVVGTNG 95 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~-~~~~~~~-~~~h~~~v~~v~~~~-~~~~l~s~~~dg 95 (340)
.|.+|+..| +.+++... +..-..+ .......|.+|+++| +...|+.++..|
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 577888777 66666543 2211111 111235799999998 344555555555
No 368
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=33.72 E-value=1.4e+02 Score=27.07 Aligned_cols=57 Identities=18% Similarity=0.133 Sum_probs=38.2
Q ss_pred eEEEEEcCCCcEEEEEccC-C----e-eEEEecC-CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 43 LLLALGTSNGDILAVDVLT-G----E-MKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 43 ~~l~~g~~dg~i~i~d~~~-~----~-~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
..+..|+.+|.|.-.-+.. + . .+..+.- ....+|..+.++++...|+.++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 3788999999987543322 2 1 1222321 14568899999999999999887766555
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.08 E-value=2.3e+02 Score=26.37 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=22.2
Q ss_pred eeEEE-EccCCCEEEE----ecCc---EEEEECCCCcee
Q 036605 118 ISSSA-FLCEEKIFAL----ASSE---VRILSLENGEEV 148 (340)
Q Consensus 118 i~~l~-~~~~~~~l~~----~~~~---i~i~d~~~~~~~ 148 (340)
...+. ++|++++++. ++.+ ++++|+.+++.+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 34445 8899988755 3333 999999999765
No 370
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=30.75 E-value=1.5e+02 Score=27.40 Aligned_cols=57 Identities=25% Similarity=0.343 Sum_probs=36.8
Q ss_pred eEEEEEcCCCcEEEE-EccCCe-------eEEEecC-CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q 036605 43 LLLALGTSNGDILAV-DVLTGE-------MKWKSTG-RHPGGLAGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 43 ~~l~~g~~dg~i~i~-d~~~~~-------~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
..++.|+.+|.|.-. ....+. .+..+.- ....+|..|.++++...|+.++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 378899999988632 221111 1111111 15568999999999999999988866554
No 371
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=30.47 E-value=1.1e+02 Score=27.36 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=43.7
Q ss_pred CeEEEEeeccccccccccCceEEEEEcCCCcEEEEEcc-CCe--eEEEecCCCCCCe-EEEEEecCCCEEEEEeCCCcEE
Q 036605 23 SYSCLACGFVGKKRRKERGTLLLALGTSNGDILAVDVL-TGE--MKWKSTGRHPGGL-AGLAFAKKGRSLHVVGTNGMAS 98 (340)
Q Consensus 23 ~v~~l~~sp~~~~~~~~~~~~~l~~g~~dg~i~i~d~~-~~~--~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~dg~i~ 98 (340)
..+.++....+ +...+..|+.+|.|.-.-+. .+. ....+.-....+| ..+.++++...|+.++..+.++
T Consensus 388 ~lT~IaVd~~~-------g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~ 460 (528)
T 3ol2_B 388 QLTAVAVTMED-------GHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLK 460 (528)
T ss_dssp CEEEEEEEEET-------TEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEE
T ss_pred ceEEEEEEeec-------CeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEE
Confidence 46666664322 12378899999998755443 211 1222211145577 4899999999999988876665
Q ss_pred E
Q 036605 99 E 99 (340)
Q Consensus 99 ~ 99 (340)
+
T Consensus 461 v 461 (528)
T 3ol2_B 461 V 461 (528)
T ss_dssp E
T ss_pred E
Confidence 5
No 372
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=26.95 E-value=2.4e+02 Score=26.08 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=37.0
Q ss_pred eEEEEEcCCCcEEEE-EccCCe-eEEEecC-CCCCCeEEEEEecCC--CEEEEEeCCCcEEE
Q 036605 43 LLLALGTSNGDILAV-DVLTGE-MKWKSTG-RHPGGLAGLAFAKKG--RSLHVVGTNGMASE 99 (340)
Q Consensus 43 ~~l~~g~~dg~i~i~-d~~~~~-~~~~~~~-~h~~~v~~v~~~~~~--~~l~s~~~dg~i~~ 99 (340)
..++.|+.+|.|.-. ....+. .+..+.. ....+|..+.++++. ..|+.++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 378899999988654 333322 2222211 145688899999887 89998887765554
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=25.68 E-value=2.8e+02 Score=22.80 Aligned_cols=138 Identities=16% Similarity=0.166 Sum_probs=73.3
Q ss_pred EEEEEcCCCcEEEEEccCCe-------eEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCC--C---------C
Q 036605 44 LLALGTSNGDILAVDVLTGE-------MKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSE--M---------G 105 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~--~---------~ 105 (340)
++++.+.+|.|+...+..-. ....+. ..+.+..+........|+..+..|.+..+... . |
T Consensus 111 ~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lk--e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~G 188 (327)
T 3uc1_A 111 YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLR--DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSG 188 (327)
T ss_dssp EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCC--TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBC
T ss_pred EEEEEcCCCEEEEeEHHHhhccccCceEEEEEC--CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCC
Confidence 79999999999998865422 122233 23456666555556678888999998888765 2 1
Q ss_pred eEEEEeecCCCCeeEEEEccCCCEEEE--ecCcEEEEECCCC-------ceeEE--eecCCCCeEEEEECCCCCEEEEEE
Q 036605 106 EVIREFKASEKPISSSAFLCEEKIFAL--ASSEVRILSLENG-------EEVLK--FSDDVGPLQYVSASDGAKIIITAG 174 (340)
Q Consensus 106 ~~~~~~~~~~~~i~~l~~~~~~~~l~~--~~~~i~i~d~~~~-------~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~ 174 (340)
.....+.. ...|.++...+++..++. ..+.++.-.+..- +-+.. +..-...+..+....+...++...
T Consensus 189 v~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T 267 (327)
T 3uc1_A 189 VQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVT 267 (327)
T ss_dssp EESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEE
T ss_pred eeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEc
Confidence 11112222 234555554444444433 3444666554321 12222 222123344444333334455545
Q ss_pred cCCCeEEEEEc
Q 036605 175 YGEKHLQVWRC 185 (340)
Q Consensus 175 ~~d~~i~iwd~ 185 (340)
. .|.+.-+..
T Consensus 268 ~-~G~~ir~~~ 277 (327)
T 3uc1_A 268 S-GGGVIRTAA 277 (327)
T ss_dssp G-GGCEEEEEG
T ss_pred C-CCeEEEEeh
Confidence 5 677766765
No 374
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.92 E-value=1.6e+02 Score=19.65 Aligned_cols=79 Identities=6% Similarity=-0.022 Sum_probs=41.4
Q ss_pred EEEEEcCCCcEEEEEccCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCeEEEEeecCCCCeeEEEE
Q 036605 44 LLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEMKSEMGEVIREFKASEKPISSSAF 123 (340)
Q Consensus 44 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~l~~ 123 (340)
+.+.-..||.+.+|+...+..++.-.....+.-..+.+..+|++++. ..++.+ +|...+.. . .....+.+
T Consensus 26 ~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~-d~~~~~-iW~S~t~~-------~-~~~~~~~L 95 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDIT-DDRLNT-VFVSNTVG-------Q-EGDYVLIL 95 (113)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEE-CTTSCE-EEECSCCC-------S-SSCCEEEE
T ss_pred EEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEE-CCCCCE-EEECCCcC-------C-CCCEEEEE
Confidence 55555678888888754455666543311222245566667776654 334443 56543311 1 11244556
Q ss_pred ccCCCEEEE
Q 036605 124 LCEEKIFAL 132 (340)
Q Consensus 124 ~~~~~~l~~ 132 (340)
..+|.+++-
T Consensus 96 ~~dGnlvly 104 (113)
T 3mez_B 96 QINGQAVVY 104 (113)
T ss_dssp CTTSCEEEE
T ss_pred cCCceEEEe
Confidence 666665544
No 375
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.81 E-value=3.3e+02 Score=23.02 Aligned_cols=163 Identities=9% Similarity=0.055 Sum_probs=86.2
Q ss_pred CccCCCC--ceeeeeeCCC--CCCCCCeEEEEee---ccccccccccCceEEEEEcCCCcEEEEEccCCeeEEEecC---
Q 036605 1 IWSTNDG--SLLAEWKQPD--GEPVVSYSCLACG---FVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTG--- 70 (340)
Q Consensus 1 vwd~~~g--~~~~~~~~~~--~~~~~~v~~l~~s---p~~~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--- 70 (340)
+||+.++ ++++.+.-+. ....+....+++. |.+. . ..+ -..++=+..+-|.+||+.+++.-+.+..
T Consensus 127 ~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~--c-~~~-~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 127 AYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD--C-SET-FVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT--S-CSE-EEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred EEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC--C-Ccc-EEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 4788998 8887766321 1223557777776 2200 0 000 1233444577899999999874433310
Q ss_pred CC--------------CCCeEEEEEecC----CCEEEEEeCCC-cEEEEe---CCCC---eEEEEeecCC---CCeeEEE
Q 036605 71 RH--------------PGGLAGLAFAKK----GRSLHVVGTNG-MASEMK---SEMG---EVIREFKASE---KPISSSA 122 (340)
Q Consensus 71 ~h--------------~~~v~~v~~~~~----~~~l~s~~~dg-~i~~wd---~~~~---~~~~~~~~~~---~~i~~l~ 122 (340)
.. ...|..|+++|+ ++.|+.....+ .+.... ++.. ..+..+ +.. ..-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 00 247888999997 77888776554 233322 1111 111222 222 2233456
Q ss_pred Ec-cCCCEEEEe--cCcEEEEECCC-C---ceeEEe-e-cCCCCeEEEEECCCCC
Q 036605 123 FL-CEEKIFALA--SSEVRILSLEN-G---EEVLKF-S-DDVGPLQYVSASDGAK 168 (340)
Q Consensus 123 ~~-~~~~~l~~~--~~~i~i~d~~~-~---~~~~~~-~-~~~~~v~~~~~s~~~~ 168 (340)
+. .+|.++++. ...|..|+..+ . .....+ . ..-..+..+.+.++|.
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 65 567666552 33399999875 1 112222 1 1224566677666654
No 376
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=22.10 E-value=2.3e+02 Score=26.25 Aligned_cols=57 Identities=12% Similarity=0.103 Sum_probs=37.6
Q ss_pred eEEEEEcCCCcEEEEEccCC----eeEEEecC-CCCCCe-EEEEEecCCCEEEEEeCCCcEEE
Q 036605 43 LLLALGTSNGDILAVDVLTG----EMKWKSTG-RHPGGL-AGLAFAKKGRSLHVVGTNGMASE 99 (340)
Q Consensus 43 ~~l~~g~~dg~i~i~d~~~~----~~~~~~~~-~h~~~v-~~v~~~~~~~~l~s~~~dg~i~~ 99 (340)
..++.|+.+|.|.-.-+... ..+..+.- ....+| ..+.++++...|+.++..+.+++
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 37889999999876544331 12223211 134566 68999998889999887766555
No 377
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=21.55 E-value=3.7e+02 Score=22.72 Aligned_cols=189 Identities=12% Similarity=0.079 Sum_probs=0.0
Q ss_pred CceEEEEEcCCCcEEEEEc------------cCCeeEEEecCCCCCCeEEEEEecCCCEEEEEeCCCcEEEE--------
Q 036605 41 GTLLLALGTSNGDILAVDV------------LTGEMKWKSTGRHPGGLAGLAFAKKGRSLHVVGTNGMASEM-------- 100 (340)
Q Consensus 41 ~~~~l~~g~~dg~i~i~d~------------~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~dg~i~~w-------- 100 (340)
+..+.++-+.+|.|+.|-. ........... ....|..|+.- ....+.-..+|.|+.|
T Consensus 135 G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~-~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqL 211 (423)
T 3mvd_K 135 GDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLM-EGTVCCSIASG--ADHLVILTTAGKVFTVGCAEQGQL 211 (423)
T ss_dssp CSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESS-TTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTT
T ss_pred CcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEec-CCCcEEEEecC--CCeEEEEecCCeEEEeeCCcCCcc
Q ss_pred ---------------eCCCCeEEEEeecCCCCeeEEEEccCCCEEE-EecCcEEEE-----------ECCCCceeEEeec
Q 036605 101 ---------------KSEMGEVIREFKASEKPISSSAFLCEEKIFA-LASSEVRIL-----------SLENGEEVLKFSD 153 (340)
Q Consensus 101 ---------------d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~~i~i~-----------d~~~~~~~~~~~~ 153 (340)
......+..........|..++......+++ +.++.|+.| +............
T Consensus 212 G~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~ 291 (423)
T 3mvd_K 212 GRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT 291 (423)
T ss_dssp SSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEE
T ss_pred CCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEc
Q ss_pred CCCCeEEEEECCCCCEEEEEEcCCCeEEEEEccCCCCCc--------cCCceeeecCCCeeeeeecCCCCCCCCEEEEEe
Q 036605 154 DVGPLQYVSASDGAKIIITAGYGEKHLQVWRCDISSKTV--------NKGPALSMRHSPVAIDCKNSPNGEDGTVILAVA 225 (340)
Q Consensus 154 ~~~~v~~~~~s~~~~~l~s~~~~d~~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s 225 (340)
....|..++.......+++ . ++.|..|=.+ ..++. ...+.........+..+ .....+.++.+
T Consensus 292 ~~~~v~~ia~G~~ht~alt--~-~G~v~~wG~n-~~GqLG~g~~~~~~~~p~~v~~l~~~v~~i-----a~G~~hs~alt 362 (423)
T 3mvd_K 292 ELKDIRHIAGGQHHTVILT--T-DLKCSVVGRP-EYGRLGLGDVKDVVEKPTIVKKLTEKIVSV-----GCGEVCSYAVT 362 (423)
T ss_dssp CCCSEEEEEECSSEEEEEE--T-TCCEEEEECC-GGGTTCSSSCCSCEEEEEECTTCCSCEEEE-----EEETTEEEEEE
T ss_pred CCCCeEEEEcccCeEEEEe--C-CCcEEEEECC-CCCCCCCCCccccccCceEeccCCCCEEEE-----EcCCCeEEEEc
Q ss_pred CCCcEEEEECCCCCcc
Q 036605 226 ESGVAYSWDLKTVSQD 241 (340)
Q Consensus 226 ~dg~i~vwd~~~~~~~ 241 (340)
.||.|+.|-.....++
T Consensus 363 ~~G~v~~wG~n~~GqL 378 (423)
T 3mvd_K 363 IDGKLYSWGSGVNNQL 378 (423)
T ss_dssp TTSCEEEEECCTTSCS
T ss_pred CCCCEEEECCCCCCCC
No 378
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=21.43 E-value=36 Score=20.43 Aligned_cols=57 Identities=19% Similarity=0.073 Sum_probs=26.2
Q ss_pred CCCeEEEecCCcchhhHhhhhhhhhhhhhccccCCCCCccccccccceeeeeecccCC
Q 036605 283 ADGQKTITGLHDLESEAATASAQNEKKSKKRAASDPDLETTRDVVDGECFTFKENLIT 340 (340)
Q Consensus 283 ~~~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (340)
..+.+.+.+...|-.+.+..=++--+.--..++-+ .++.-+-+--++|+++|++++|
T Consensus 16 ~~KsL~Lf~P~gLt~~Q~~QW~~TIeav~qSakyW-NlaEC~~~~s~~~~ilk~r~mT 72 (75)
T 2fqm_A 16 HGKTLRLTLPEGLSGEQKSQWMLTIKAVVQSAKHW-NLAECTFEASGEGVIIKKRQIT 72 (75)
T ss_dssp TEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHS-CGGGSEEEECSSEEEEEEC---
T ss_pred CCceEEEeCCCCccHHHHHHHHHHHHHHHhhhccc-chhheEEEecCCcEEEeccccC
Confidence 34566677777766665542111111111122222 2333333345579999999886
Done!