BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036617
MEHTLIPALDALNRKDVEGVINLLRRALQVLLARAVNIVILASNDTLDLLPPDDPLLNKC
IDPMDALVCSQMGEI

High Scoring Gene Products

Symbol, full name Information P value
AT1G15410 protein from Arabidopsis thaliana 1.6e-07

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036617
        (75 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037743 - symbol:AT1G15410 species:3702 "Arabi...   126  1.6e-07   1


>TAIR|locus:2037743 [details] [associations]
            symbol:AT1G15410 species:3702 "Arabidopsis thaliana"
            [GO:0006520 "cellular amino acid metabolic process" evidence=IEA]
            [GO:0008152 "metabolic process" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0016855 "racemase and epimerase
            activity, acting on amino acids and derivatives" evidence=IEA;ISS]
            InterPro:IPR015942 InterPro:IPR001920 Pfam:PF01177 EMBL:CP002684
            GO:GO:0009507 EMBL:AC007591 GO:GO:0006807 GO:GO:0036361
            Gene3D:3.40.50.1860 SUPFAM:SSF53681 UniGene:At.41934
            UniGene:At.71257 EMBL:BT002350 IPI:IPI00546030 RefSeq:NP_172993.1
            ProteinModelPortal:Q9XI28 SMR:Q9XI28 PRIDE:Q9XI28
            EnsemblPlants:AT1G15410.1 GeneID:838111 KEGG:ath:AT1G15410
            TAIR:At1g15410 InParanoid:Q9XI28 OMA:IIIPCNT PhylomeDB:Q9XI28
            ProtClustDB:CLSN2679471 ArrayExpress:Q9XI28 Genevestigator:Q9XI28
            Uniprot:Q9XI28
        Length = 330

 Score = 126 (49.4 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 26/70 (37%), Positives = 37/70 (52%)

Query:     1 MEHTLIPALDALNRKDVEGVINXXXXXXXXXXXXXXNIVILASNDTXXXXXXXXXXXNKC 60
             MEHT+IP+++A+ RKD+EG  N              N+V+L S++             KC
Sbjct:   251 MEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKC 310

Query:    61 IDPMDALVCS 70
             +DPMDAL  S
Sbjct:   311 VDPMDALARS 320


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       75        50   0.00091  102 3  11 22  0.38    27
                                                     29  0.41    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  401 (43 KB)
  Total size of DFA:  68 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  3.51u 0.18s 3.69t   Elapsed:  00:00:01
  Total cpu time:  3.51u 0.18s 3.69t   Elapsed:  00:00:01
  Start:  Mon May 20 17:34:16 2013   End:  Mon May 20 17:34:17 2013

Back to top