Query 036621
Match_columns 376
No_of_seqs 143 out of 1547
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 05:48:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036621.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036621hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.5 3.7E-11 1.3E-15 108.7 26.1 210 106-337 52-280 (306)
2 1zgk_A Kelch-like ECH-associat 99.5 7.8E-12 2.7E-16 113.4 21.3 209 106-337 67-295 (308)
3 2woz_A Kelch repeat and BTB do 99.5 2.5E-11 8.6E-16 110.5 24.7 194 121-335 80-293 (318)
4 4asc_A Kelch repeat and BTB do 99.5 1.7E-11 5.8E-16 111.5 23.1 196 120-336 68-284 (315)
5 2vpj_A Kelch-like protein 12; 99.4 2.8E-11 9.4E-16 109.2 22.9 209 106-337 59-286 (301)
6 2xn4_A Kelch-like protein 2; s 99.4 3.1E-11 1.1E-15 109.0 22.6 208 106-336 58-283 (302)
7 2vpj_A Kelch-like protein 12; 99.4 9.3E-11 3.2E-15 105.7 23.6 197 118-337 30-239 (301)
8 3ii7_A Kelch-like protein 7; p 99.4 1.1E-10 3.7E-15 105.6 22.2 196 118-337 23-233 (306)
9 2xn4_A Kelch-like protein 2; s 99.4 1.5E-10 5.2E-15 104.4 22.5 196 119-337 30-237 (302)
10 1zgk_A Kelch-like ECH-associat 99.3 8.8E-11 3E-15 106.4 18.6 199 118-337 38-248 (308)
11 4asc_A Kelch repeat and BTB do 99.3 8.1E-10 2.8E-14 100.3 23.2 202 119-337 13-229 (315)
12 2woz_A Kelch repeat and BTB do 99.2 1.6E-09 5.4E-14 98.5 20.4 211 109-337 15-239 (318)
13 2uvk_A YJHT; unknown function, 99.2 1.6E-09 5.4E-14 100.1 20.7 215 107-337 17-302 (357)
14 2e31_A FBS1, F-box only protei 99.2 1.4E-11 4.8E-16 109.0 4.2 53 1-53 46-99 (297)
15 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 4E-11 1.4E-15 78.2 2.9 44 4-47 7-50 (53)
16 2uvk_A YJHT; unknown function, 99.0 3.5E-08 1.2E-12 91.0 20.3 215 106-337 62-350 (357)
17 2zwa_A Leucine carboxyl methyl 99.0 2.2E-08 7.6E-13 100.7 19.1 210 108-338 396-644 (695)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.9 4.3E-06 1.5E-10 79.1 30.6 284 6-333 19-312 (445)
19 1k3i_A Galactose oxidase precu 98.7 1.2E-07 4.2E-12 94.8 14.5 208 109-336 197-504 (656)
20 3v7d_B Cell division control p 98.7 1.3E-05 4.5E-10 76.0 27.5 44 7-50 16-60 (464)
21 1p22_A F-BOX/WD-repeat protein 98.6 2.8E-05 9.4E-10 73.3 27.1 285 7-333 12-329 (435)
22 2zwa_A Leucine carboxyl methyl 98.5 1.7E-06 5.7E-11 87.1 14.5 149 183-337 412-591 (695)
23 3l2o_B F-box only protein 4; s 98.1 6.8E-07 2.3E-11 78.2 1.0 51 5-55 4-54 (312)
24 1k3i_A Galactose oxidase precu 98.1 1.4E-05 4.7E-10 79.9 10.5 144 186-335 169-329 (656)
25 2ast_B S-phase kinase-associat 97.5 3.1E-05 1.1E-09 70.3 2.0 42 4-45 7-48 (336)
26 2p1m_B Transport inhibitor res 97.0 0.00019 6.5E-09 70.4 1.4 39 1-39 1-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.001 3.5E-08 65.2 1.7 34 6-39 13-47 (592)
28 3dsm_A Uncharacterized protein 95.7 1 3.5E-05 40.0 19.8 195 109-333 2-216 (328)
29 3ei3_B DNA damage-binding prot 95.4 1.4 4.8E-05 39.6 20.6 188 111-331 88-284 (383)
30 3jrp_A Fusion protein of prote 94.6 2.2 7.7E-05 37.8 20.4 139 183-331 79-242 (379)
31 2z2n_A Virginiamycin B lyase; 94.4 2.1 7.2E-05 36.6 19.3 187 108-333 108-299 (299)
32 3jro_A Fusion protein of prote 94.3 3.8 0.00013 41.1 20.0 192 112-331 24-240 (753)
33 4gqb_B Methylosome protein 50; 94.0 2.5 8.5E-05 37.8 16.3 195 109-335 93-295 (344)
34 1l0q_A Surface layer protein; 93.7 3.7 0.00013 36.8 18.3 188 109-334 85-280 (391)
35 3hfq_A Uncharacterized protein 93.0 4.5 0.00015 35.7 16.4 114 215-335 50-178 (347)
36 4aez_A CDC20, WD repeat-contai 92.6 5.8 0.0002 35.9 22.0 190 108-333 102-297 (401)
37 3mbr_X Glutamine cyclotransfer 92.6 4.4 0.00015 34.5 15.9 113 212-337 27-142 (243)
38 1p22_A F-BOX/WD-repeat protein 92.5 6.3 0.00021 36.1 16.9 135 183-333 276-418 (435)
39 1q7f_A NHL, brain tumor CG1071 92.2 4.9 0.00017 34.3 21.7 199 109-337 40-246 (286)
40 1l0q_A Surface layer protein; 92.1 6.3 0.00022 35.2 19.7 184 111-334 3-194 (391)
41 3fm0_A Protein CIAO1; WDR39,SG 92.0 6.2 0.00021 34.9 18.8 183 116-327 35-223 (345)
42 4e54_B DNA damage-binding prot 91.9 1.9 6.4E-05 39.9 12.5 189 111-331 134-329 (435)
43 3bws_A Protein LP49; two-domai 91.8 7.3 0.00025 35.4 18.9 192 107-334 178-395 (433)
44 4g56_B MGC81050 protein; prote 91.7 2.4 8.3E-05 38.0 12.7 194 109-334 105-306 (357)
45 2aq5_A Coronin-1A; WD40 repeat 91.4 7.8 0.00027 35.0 21.2 198 109-336 93-308 (402)
46 2iwa_A Glutamine cyclotransfer 90.9 7.2 0.00025 33.6 14.3 111 216-338 32-145 (266)
47 1k8k_C P40, ARP2/3 complex 41 90.7 8.3 0.00028 33.9 20.4 190 112-332 23-236 (372)
48 1gxr_A ESG1, transducin-like e 90.0 8.8 0.0003 33.1 23.3 195 108-335 61-261 (337)
49 3nol_A Glutamine cyclotransfer 89.7 9.1 0.00031 32.9 14.7 112 213-337 50-164 (262)
50 3hfq_A Uncharacterized protein 89.7 10 0.00034 33.3 24.2 146 183-337 162-327 (347)
51 2pm9_A Protein WEB1, protein t 89.6 11 0.00038 33.7 15.9 195 111-331 128-339 (416)
52 1ri6_A Putative isomerase YBHE 88.8 11 0.00037 32.6 21.4 148 183-337 151-318 (343)
53 3dsm_A Uncharacterized protein 88.7 12 0.00041 32.9 22.1 187 109-333 53-257 (328)
54 1npe_A Nidogen, entactin; glyc 88.1 11 0.00038 31.8 19.3 195 106-337 44-247 (267)
55 4gga_A P55CDC, cell division c 88.1 15 0.00052 33.3 23.3 200 103-335 109-316 (420)
56 3g4e_A Regucalcin; six bladed 88.1 12 0.00041 32.2 19.8 196 109-338 24-239 (297)
57 1k8k_C P40, ARP2/3 complex 41 87.2 7.1 0.00024 34.4 12.1 108 215-331 19-129 (372)
58 3nok_A Glutaminyl cyclase; bet 87.1 14 0.00047 31.8 13.2 108 214-337 63-173 (268)
59 3e5z_A Putative gluconolactona 86.8 14 0.00047 31.6 16.7 197 108-334 78-291 (296)
60 3q7m_A Lipoprotein YFGL, BAMB; 86.7 17 0.00057 32.4 19.6 189 105-333 99-300 (376)
61 2dg1_A DRP35, lactonase; beta 86.6 7.6 0.00026 33.9 11.8 113 215-335 55-177 (333)
62 3dwl_C Actin-related protein 2 86.4 17 0.00057 32.1 15.7 192 109-332 22-239 (377)
63 3sjl_D Methylamine dehydrogena 85.3 16 0.00056 33.2 13.4 111 214-332 236-366 (386)
64 1rwi_B Serine/threonine-protei 85.1 16 0.00053 30.5 18.2 183 109-331 77-266 (270)
65 3dwl_C Actin-related protein 2 85.0 20 0.00067 31.6 15.1 68 264-333 216-285 (377)
66 3scy_A Hypothetical bacterial 84.9 20 0.00067 31.6 22.3 114 215-336 221-346 (361)
67 2ojh_A Uncharacterized protein 84.8 16 0.00055 30.5 17.3 197 109-336 52-265 (297)
68 2qc5_A Streptogramin B lactona 84.7 17 0.00058 30.7 13.2 107 215-335 30-139 (300)
69 1q7f_A NHL, brain tumor CG1071 84.5 17 0.0006 30.6 22.5 186 108-329 87-280 (286)
70 1ri6_A Putative isomerase YBHE 84.5 19 0.00065 31.0 16.9 137 183-333 60-215 (343)
71 3jrp_A Fusion protein of prote 84.3 20 0.0007 31.3 14.3 98 230-331 32-136 (379)
72 3e5z_A Putative gluconolactona 83.2 21 0.0007 30.4 22.2 196 111-338 42-255 (296)
73 2hqs_A Protein TOLB; TOLB, PAL 82.8 28 0.00096 31.7 20.2 186 119-337 203-395 (415)
74 3fm0_A Protein CIAO1; WDR39,SG 81.5 27 0.00092 30.6 16.0 142 183-333 38-185 (345)
75 2qc5_A Streptogramin B lactona 81.0 24 0.00081 29.7 19.0 191 108-337 71-267 (300)
76 2p4o_A Hypothetical protein; p 80.9 22 0.00074 30.7 12.2 103 215-330 42-148 (306)
77 2vdu_B TRNA (guanine-N(7)-)-me 80.7 34 0.0012 31.2 19.4 97 230-332 170-274 (450)
78 2fp8_A Strictosidine synthase; 80.6 16 0.00054 31.8 11.2 55 230-286 259-313 (322)
79 4e54_B DNA damage-binding prot 80.3 34 0.0012 31.1 17.0 57 276-334 377-435 (435)
80 3i2n_A WD repeat-containing pr 80.2 28 0.00096 30.0 20.5 191 111-330 131-354 (357)
81 3odt_A Protein DOA1; ubiquitin 80.0 26 0.0009 29.5 19.3 95 230-333 204-300 (313)
82 1nir_A Nitrite reductase; hemo 80.0 42 0.0014 31.9 19.0 193 108-334 147-360 (543)
83 3q7m_A Lipoprotein YFGL, BAMB; 79.7 32 0.0011 30.4 15.9 111 209-333 47-166 (376)
84 1rwi_B Serine/threonine-protei 79.7 25 0.00086 29.1 15.4 187 108-334 33-227 (270)
85 3bg1_A Protein SEC13 homolog; 78.9 31 0.0011 29.8 14.5 54 276-329 188-247 (316)
86 3odt_A Protein DOA1; ubiquitin 78.8 29 0.00098 29.3 22.2 186 109-333 29-218 (313)
87 2ovr_B FBW7, F-BOX/WD repeat p 78.6 39 0.0013 30.7 22.7 110 211-333 284-395 (445)
88 3mbr_X Glutamine cyclotransfer 78.6 29 0.001 29.3 15.6 137 183-337 43-188 (243)
89 3scy_A Hypothetical bacterial 78.1 35 0.0012 29.9 18.8 146 184-336 76-249 (361)
90 1nir_A Nitrite reductase; hemo 78.1 48 0.0017 31.5 17.7 112 215-332 334-461 (543)
91 2mad_H Methylamine dehydrogena 77.9 35 0.0012 30.6 12.9 70 265-335 279-356 (373)
92 4a11_B DNA excision repair pro 77.9 36 0.0012 30.0 19.9 63 111-193 114-176 (408)
93 3v65_B Low-density lipoprotein 77.6 40 0.0014 30.4 18.6 193 108-337 126-327 (386)
94 3bws_A Protein LP49; two-domai 77.3 40 0.0014 30.2 18.1 188 111-329 225-432 (433)
95 2z2n_A Virginiamycin B lyase; 76.6 33 0.0011 28.8 20.7 191 108-337 66-262 (299)
96 3jro_A Fusion protein of prote 76.2 45 0.0015 33.1 14.2 98 230-331 30-134 (753)
97 1r5m_A SIR4-interacting protei 76.1 42 0.0014 29.7 18.9 185 108-329 216-425 (425)
98 1yfq_A Cell cycle arrest prote 76.0 37 0.0013 29.1 20.0 188 111-332 71-285 (342)
99 3f3f_A Nucleoporin SEH1; struc 75.6 37 0.0013 28.9 14.6 98 230-331 32-145 (351)
100 3u4y_A Uncharacterized protein 75.4 38 0.0013 29.0 20.5 189 109-332 9-210 (331)
101 3lrv_A PRE-mRNA-splicing facto 74.3 43 0.0015 29.1 17.9 196 104-334 89-299 (343)
102 3mmy_A MRNA export factor; mRN 74.3 42 0.0014 28.9 19.4 189 109-332 97-307 (368)
103 1pby_B Quinohemoprotein amine 74.0 41 0.0014 28.7 17.5 92 232-332 220-313 (337)
104 3no2_A Uncharacterized protein 73.5 42 0.0014 28.6 16.5 186 110-332 6-198 (276)
105 3vgz_A Uncharacterized protein 73.0 45 0.0015 28.7 28.5 204 107-334 98-308 (353)
106 2xyi_A Probable histone-bindin 72.8 55 0.0019 29.6 16.4 193 111-332 196-413 (430)
107 4a11_B DNA excision repair pro 72.7 49 0.0017 29.0 17.5 192 112-332 59-279 (408)
108 1pjx_A Dfpase, DIISOPROPYLFLUO 72.6 43 0.0015 28.4 21.7 193 117-336 44-264 (314)
109 3nol_A Glutamine cyclotransfer 72.1 46 0.0016 28.4 14.8 136 183-337 65-210 (262)
110 2ghs_A AGR_C_1268P; regucalcin 70.9 52 0.0018 28.6 13.4 104 215-335 60-174 (326)
111 3vl1_A 26S proteasome regulato 70.8 57 0.002 29.0 20.0 95 230-329 312-419 (420)
112 2pm7_B Protein transport prote 70.5 49 0.0017 28.1 12.9 97 230-330 30-133 (297)
113 2hqs_A Protein TOLB; TOLB, PAL 70.1 63 0.0022 29.2 20.1 187 119-336 159-351 (415)
114 3hrp_A Uncharacterized protein 70.0 60 0.0021 29.5 12.5 108 215-335 141-255 (409)
115 3u4y_A Uncharacterized protein 69.7 52 0.0018 28.1 17.3 183 120-335 109-310 (331)
116 1npe_A Nidogen, entactin; glyc 68.4 51 0.0017 27.5 16.3 140 183-335 58-204 (267)
117 2ojh_A Uncharacterized protein 68.4 49 0.0017 27.3 19.6 183 118-336 21-213 (297)
118 3lrv_A PRE-mRNA-splicing facto 67.9 54 0.0019 28.4 11.5 96 230-331 148-246 (343)
119 4g56_B MGC81050 protein; prote 67.9 63 0.0022 28.4 18.5 187 108-330 149-344 (357)
120 1n7d_A LDL receptor, low-densi 67.8 22 0.00074 35.3 9.4 135 184-333 476-618 (699)
121 2oiz_A Aromatic amine dehydrog 67.8 66 0.0022 28.5 12.1 71 265-337 266-342 (361)
122 2vdu_B TRNA (guanine-N(7)-)-me 67.6 73 0.0025 28.9 22.5 196 111-333 163-397 (450)
123 3v9f_A Two-component system se 67.6 1E+02 0.0035 30.6 20.1 143 183-336 469-618 (781)
124 4aez_A CDC20, WD repeat-contai 67.5 68 0.0023 28.6 21.3 99 230-333 283-384 (401)
125 2hz6_A Endoplasmic reticulum t 67.2 26 0.00088 31.4 9.2 179 108-333 8-196 (369)
126 1gxr_A ESG1, transducin-like e 66.8 59 0.002 27.6 23.4 184 111-333 111-300 (337)
127 3mkq_A Coatomer beta'-subunit; 66.8 1E+02 0.0035 30.4 22.2 186 110-333 68-263 (814)
128 3g4e_A Regucalcin; six bladed 66.5 60 0.0021 27.6 15.7 101 215-329 24-139 (297)
129 3m0c_C LDL receptor, low-densi 66.1 1.1E+02 0.0039 30.6 22.8 134 183-331 493-634 (791)
130 3v65_B Low-density lipoprotein 66.0 75 0.0026 28.5 22.7 188 109-335 87-283 (386)
131 3dr2_A Exported gluconolactona 65.5 31 0.0011 29.6 9.1 109 215-336 55-185 (305)
132 3v9f_A Two-component system se 65.1 1.1E+02 0.0039 30.3 21.7 198 109-336 323-531 (781)
133 1r5m_A SIR4-interacting protei 64.4 75 0.0026 27.9 22.0 96 230-333 226-323 (425)
134 1pgu_A Actin interacting prote 64.1 96 0.0033 29.1 22.4 135 183-330 467-615 (615)
135 2aq5_A Coronin-1A; WD40 repeat 62.8 83 0.0028 27.9 21.4 185 117-331 55-256 (402)
136 3k26_A Polycomb protein EED; W 62.5 75 0.0026 27.3 22.2 63 265-329 299-366 (366)
137 3v64_C Agrin; beta propeller, 62.4 83 0.0028 27.8 21.0 193 107-336 82-283 (349)
138 1jmx_B Amine dehydrogenase; ox 61.5 45 0.0016 28.6 9.6 105 214-331 9-136 (349)
139 3zwl_B Eukaryotic translation 60.1 82 0.0028 27.0 23.1 196 112-334 47-254 (369)
140 3mmy_A MRNA export factor; mRN 59.9 83 0.0028 26.9 12.5 70 265-336 54-124 (368)
141 2fp8_A Strictosidine synthase; 59.2 86 0.0029 26.9 17.9 202 112-337 33-277 (322)
142 2pm9_A Protein WEB1, protein t 58.1 98 0.0034 27.2 15.9 94 230-330 135-250 (416)
143 3mkq_A Coatomer beta'-subunit; 58.0 1.5E+02 0.005 29.2 21.5 184 115-332 31-220 (814)
144 3vl1_A 26S proteasome regulato 57.9 1E+02 0.0034 27.3 24.0 195 109-337 108-332 (420)
145 3sov_A LRP-6, low-density lipo 57.2 98 0.0033 26.9 20.3 139 183-337 101-247 (318)
146 3dm0_A Maltose-binding peripla 57.0 1.4E+02 0.0049 28.8 20.9 96 230-333 540-636 (694)
147 1qks_A Cytochrome CD1 nitrite 55.7 1.4E+02 0.0049 28.4 20.7 197 109-337 166-382 (567)
148 4gga_A P55CDC, cell division c 54.6 1.2E+02 0.0041 27.1 13.4 87 244-333 95-182 (420)
149 3bg1_A Protein SEC13 homolog; 54.6 1E+02 0.0035 26.3 19.8 103 230-337 188-302 (316)
150 3fvz_A Peptidyl-glycine alpha- 54.6 1E+02 0.0036 26.5 16.9 158 109-286 154-322 (329)
151 4aow_A Guanine nucleotide-bind 54.4 99 0.0034 26.2 19.1 95 230-331 236-339 (340)
152 1sq9_A Antiviral protein SKI8; 54.0 1.1E+02 0.0038 26.7 19.8 69 259-332 191-270 (397)
153 3hrp_A Uncharacterized protein 53.6 1.3E+02 0.0044 27.2 21.4 194 108-335 140-360 (409)
154 3sov_A LRP-6, low-density lipo 53.5 1.1E+02 0.0038 26.5 10.7 61 215-286 46-110 (318)
155 3v64_C Agrin; beta propeller, 53.1 1.2E+02 0.0041 26.7 22.9 188 109-335 44-240 (349)
156 3m0c_C LDL receptor, low-densi 52.9 1.9E+02 0.0065 29.0 17.5 80 184-273 538-621 (791)
157 3vu4_A KMHSV2; beta-propeller 52.7 1.2E+02 0.004 26.5 19.1 63 264-331 206-273 (355)
158 1kv9_A Type II quinohemoprotei 52.5 1.1E+02 0.0036 30.0 11.3 113 209-333 60-191 (668)
159 3iz6_a 40S ribosomal protein R 52.1 1.2E+02 0.0042 26.6 19.2 191 111-331 172-377 (380)
160 3vgz_A Uncharacterized protein 51.9 1.1E+02 0.0038 26.0 15.6 140 183-333 69-219 (353)
161 3tc9_A Hypothetical hydrolase; 51.5 1.4E+02 0.0049 27.2 15.1 112 211-333 141-261 (430)
162 1pgu_A Actin interacting prote 50.8 1.6E+02 0.0055 27.5 19.4 148 111-286 175-328 (615)
163 2ad6_A Methanol dehydrogenase 50.6 1.4E+02 0.0046 28.6 11.5 114 209-333 56-189 (571)
164 2p4o_A Hypothetical protein; p 50.6 1.2E+02 0.004 25.9 20.5 194 109-335 42-247 (306)
165 1erj_A Transcriptional repress 50.4 1.3E+02 0.0046 26.5 22.8 192 109-333 134-345 (393)
166 3nok_A Glutaminyl cyclase; bet 50.3 1.2E+02 0.0041 25.9 13.1 110 212-338 102-220 (268)
167 2pm7_B Protein transport prote 48.9 1.2E+02 0.0041 25.5 20.3 64 265-330 170-239 (297)
168 3sfz_A APAF-1, apoptotic pepti 48.7 2.6E+02 0.0088 29.3 22.0 189 109-334 626-833 (1249)
169 1ddw_A GLGF-domain protein hom 48.6 33 0.0011 25.4 5.3 39 119-168 11-50 (120)
170 4hw6_A Hypothetical protein, I 47.9 1.6E+02 0.0056 26.8 12.9 113 209-332 141-262 (433)
171 2bkl_A Prolyl endopeptidase; m 46.5 2.1E+02 0.0073 27.7 21.7 189 120-336 203-404 (695)
172 4ery_A WD repeat-containing pr 46.1 1.3E+02 0.0045 25.2 23.1 183 115-333 41-227 (312)
173 1n7d_A LDL receptor, low-densi 45.2 1.7E+02 0.0057 28.9 11.4 55 211-272 544-602 (699)
174 1got_B GT-beta; complex (GTP-b 44.9 1.5E+02 0.0051 25.5 14.3 98 230-333 76-177 (340)
175 1pby_B Quinohemoprotein amine 44.8 1.4E+02 0.0048 25.1 11.7 97 230-333 10-128 (337)
176 3v7d_B Cell division control p 44.8 1.7E+02 0.006 26.2 24.9 95 230-334 331-426 (464)
177 1kb0_A Quinohemoprotein alcoho 44.3 1.1E+02 0.0038 29.9 10.0 114 209-333 71-203 (677)
178 2ghs_A AGR_C_1268P; regucalcin 44.3 1.5E+02 0.0052 25.4 20.2 195 109-338 60-269 (326)
179 1jmx_B Amine dehydrogenase; ox 44.0 1.5E+02 0.005 25.1 14.5 145 183-334 21-180 (349)
180 3gre_A Serine/threonine-protei 43.3 1.8E+02 0.0061 25.9 18.3 98 230-334 191-297 (437)
181 3f3f_A Nucleoporin SEH1; struc 42.8 1.5E+02 0.0051 24.8 21.7 65 265-331 182-251 (351)
182 2pbi_B Guanine nucleotide-bind 42.6 1.7E+02 0.0058 25.4 19.9 181 111-326 168-354 (354)
183 4ggc_A P55CDC, cell division c 42.5 1.5E+02 0.005 24.7 14.0 59 276-334 44-103 (318)
184 1yiq_A Quinohemoprotein alcoho 42.3 1.6E+02 0.0054 28.9 10.7 114 209-333 64-196 (689)
185 1vyh_C Platelet-activating fac 41.7 1.9E+02 0.0065 25.7 20.4 63 265-331 308-371 (410)
186 4a2l_A BT_4663, two-component 41.4 2.7E+02 0.0094 27.5 22.0 198 109-336 273-487 (795)
187 3sre_A PON1, serum paraoxonase 41.2 1.9E+02 0.0066 25.7 15.6 191 117-329 81-298 (355)
188 2kwv_A RAD30 homolog B, DNA po 41.1 13 0.00044 22.1 1.5 17 7-23 22-38 (48)
189 2dg1_A DRP35, lactonase; beta 40.7 1.7E+02 0.0057 24.8 22.5 204 108-337 54-271 (333)
190 4ggc_A P55CDC, cell division c 40.4 1.6E+02 0.0054 24.5 23.9 197 107-337 34-238 (318)
191 3frx_A Guanine nucleotide-bind 40.2 1.6E+02 0.0056 25.0 9.6 65 266-332 31-99 (319)
192 3p5b_L Low density lipoprotein 39.9 2.1E+02 0.0071 25.7 21.8 159 151-336 161-328 (400)
193 2z3z_A Dipeptidyl aminopeptida 39.9 2.6E+02 0.009 26.9 19.3 187 119-331 235-437 (706)
194 4a0p_A LRP6, LRP-6, low-densit 39.8 2.7E+02 0.0092 26.9 18.9 186 106-331 45-239 (628)
195 3ow8_A WD repeat-containing pr 39.3 1.8E+02 0.0062 24.8 23.1 96 230-333 185-283 (321)
196 1i2h_A PSD-ZIP45(homer-1C/VESL 38.7 54 0.0018 25.8 5.3 39 119-168 16-55 (168)
197 3c75_H MADH, methylamine dehyd 38.1 2.4E+02 0.0081 25.8 13.7 69 264-333 330-406 (426)
198 1sq9_A Antiviral protein SKI8; 37.7 2E+02 0.0069 24.9 20.7 97 231-331 258-397 (397)
199 1ijq_A LDL receptor, low-densi 37.2 2E+02 0.0068 24.7 21.6 195 106-336 38-246 (316)
200 4gqb_B Methylosome protein 50; 35.9 2.2E+02 0.0074 24.7 19.2 188 109-332 138-334 (344)
201 1ijq_A LDL receptor, low-densi 35.8 2.1E+02 0.0072 24.5 21.4 179 119-335 10-201 (316)
202 1evh_A WH1 domain, protein (ME 35.7 60 0.002 23.6 4.9 41 119-168 11-51 (112)
203 2ymu_A WD-40 repeat protein; u 35.7 2.7E+02 0.0092 25.8 24.7 98 230-336 406-505 (577)
204 4h5i_A Guanine nucleotide-exch 35.6 2.2E+02 0.0077 24.8 18.3 195 107-330 142-344 (365)
205 3ei3_B DNA damage-binding prot 34.8 2.2E+02 0.0077 24.6 22.4 135 183-329 96-236 (383)
206 2qe8_A Uncharacterized protein 34.8 1.8E+02 0.0062 25.1 9.1 80 211-290 71-159 (343)
207 2dk7_A Transcription elongatio 34.6 32 0.0011 22.9 2.8 19 313-331 23-41 (73)
208 3dr2_A Exported gluconolactona 34.0 2.1E+02 0.0073 24.0 19.5 197 111-338 59-276 (305)
209 3s94_A LRP-6, low-density lipo 33.5 3.3E+02 0.011 26.2 18.9 187 105-331 47-245 (619)
210 2ynn_A Coatomer subunit beta'; 33.3 2.2E+02 0.0074 23.9 23.9 186 111-334 69-264 (304)
211 2hz6_A Endoplasmic reticulum t 31.7 8.8 0.0003 34.6 -0.3 27 210-242 4-30 (369)
212 2ynn_A Coatomer subunit beta'; 31.3 2.3E+02 0.008 23.7 9.9 65 264-332 24-89 (304)
213 3dm0_A Maltose-binding peripla 31.0 3.7E+02 0.013 25.9 20.6 179 117-328 492-692 (694)
214 2iwa_A Glutamine cyclotransfer 30.8 2.4E+02 0.0084 23.8 15.9 138 183-337 44-190 (266)
215 1yr2_A Prolyl oligopeptidase; 30.8 3.9E+02 0.013 26.1 22.4 140 183-335 294-447 (741)
216 3p5b_L Low density lipoprotein 30.0 3E+02 0.01 24.6 16.7 52 215-273 257-309 (400)
217 4aow_A Guanine nucleotide-bind 30.0 2.4E+02 0.0084 23.5 20.8 95 230-332 194-289 (340)
218 3o4h_A Acylamino-acid-releasin 29.5 3.5E+02 0.012 25.2 16.6 190 109-335 122-320 (582)
219 1got_B GT-beta; complex (GTP-b 28.8 2.7E+02 0.0094 23.7 20.9 96 230-333 205-305 (340)
220 3frx_A Guanine nucleotide-bind 28.4 2.7E+02 0.0092 23.5 23.2 187 109-331 76-269 (319)
221 3iz6_a 40S ribosomal protein R 27.7 3.1E+02 0.01 23.9 18.4 98 230-333 227-333 (380)
222 4hvt_A Ritya.17583.B, post-pro 27.4 4.6E+02 0.016 25.8 11.8 121 212-336 296-436 (711)
223 1yfq_A Cell cycle arrest prote 26.4 2.9E+02 0.0098 23.2 18.5 182 111-330 25-226 (342)
224 3hxj_A Pyrrolo-quinoline quino 26.1 2.9E+02 0.0099 23.1 8.8 31 306-336 221-251 (330)
225 4a2l_A BT_4663, two-component 25.5 4.9E+02 0.017 25.6 23.3 200 108-336 224-443 (795)
226 4ery_A WD repeat-containing pr 25.0 3E+02 0.01 22.9 22.0 180 115-328 125-311 (312)
227 2ymu_A WD-40 repeat protein; u 24.9 4.1E+02 0.014 24.4 22.6 97 230-335 447-545 (577)
228 3gre_A Serine/threonine-protei 24.8 3.2E+02 0.011 24.1 9.2 65 264-332 181-248 (437)
229 2ecf_A Dipeptidyl peptidase IV 24.3 4.8E+02 0.017 25.1 15.9 192 120-335 264-465 (741)
230 1egx_A VAsp, vasodilator-stimu 24.2 1.1E+02 0.0036 22.4 4.5 42 120-169 12-53 (115)
231 3hxj_A Pyrrolo-quinoline quino 23.9 2.6E+02 0.0089 23.4 8.0 21 308-328 145-165 (330)
232 1qks_A Cytochrome CD1 nitrite 23.6 4.8E+02 0.016 24.8 14.3 107 215-334 166-280 (567)
233 3azo_A Aminopeptidase; POP fam 23.0 4.8E+02 0.017 24.6 19.6 144 183-336 217-376 (662)
234 2be1_A Serine/threonine-protei 23.0 1.8E+02 0.0062 25.7 6.7 27 309-335 110-136 (339)
235 2w18_A PALB2, fancn, partner a 23.0 1.3E+02 0.0046 26.8 5.8 30 264-295 52-82 (356)
236 1flg_A Protein (quinoprotein e 22.8 5E+02 0.017 24.7 11.4 116 209-334 62-198 (582)
237 3k26_A Polycomb protein EED; W 22.7 3.4E+02 0.012 22.8 22.6 192 110-331 85-320 (366)
238 2hes_X YDR267CP; beta-propelle 22.0 3.6E+02 0.012 22.8 20.6 64 263-329 259-328 (330)
239 3c5m_A Oligogalacturonate lyas 21.8 3.8E+02 0.013 23.0 12.8 144 183-336 168-336 (396)
240 1erj_A Transcriptional repress 21.2 4.1E+02 0.014 23.1 14.6 95 230-332 144-241 (393)
241 3i2n_A WD repeat-containing pr 20.9 3.7E+02 0.013 22.5 23.2 104 215-330 179-292 (357)
242 2xbg_A YCF48-like protein; pho 20.4 4.1E+02 0.014 22.7 15.1 140 184-337 14-159 (327)
243 2z3z_A Dipeptidyl aminopeptida 20.0 5.7E+02 0.02 24.4 17.6 149 183-336 235-398 (706)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.47 E-value=3.7e-11 Score=108.69 Aligned_cols=210 Identities=13% Similarity=0.053 Sum_probs=142.9
Q ss_pred cceeceEEEecC-----CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCc
Q 036621 106 GLYCGIVFIEGL-----NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSC 180 (376)
Q Consensus 106 ~s~~Gll~~~~~-----~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 180 (376)
...+|.|.+..+ ...+.++||.|++|..+|+++...... . ...++ =+++.++. +.. .....
T Consensus 52 ~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~-----~~iyv~GG-~~~-~~~~~ 117 (306)
T 3ii7_A 52 VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL------A-ACAAE-----GKIYTSGG-SEV-GNSAL 117 (306)
T ss_dssp EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC------E-EEEET-----TEEEEECC-BBT-TBSCC
T ss_pred EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce------e-EEEEC-----CEEEEECC-CCC-CCcEe
Confidence 345777766653 367999999999999998877543222 1 11222 24555532 211 11222
Q ss_pred ccceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCC----ceEEEEEEcCccceeee-cCCCCCCCC
Q 036621 181 AFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDND----SYVILSFNMADEKFQEI-QGPCILESS 255 (376)
Q Consensus 181 ~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~----~~~il~fD~~~~~~~~i-~~P~~~~~~ 255 (376)
..+++|+..+++|+.++.+|..... ...+.++|.+|.+++...... ...+..||+.+++|+.+ ++|....
T Consensus 118 --~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-- 192 (306)
T 3ii7_A 118 --YLFECYDTRTESWHTKPSMLTQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK-- 192 (306)
T ss_dssp --CCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB--
T ss_pred --eeEEEEeCCCCceEeCCCCcCCcce-eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh--
Confidence 6899999999999999988775444 668889999999997643222 56799999999999999 5665544
Q ss_pred CceEEEEECCeEEEEEEecCC-CEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEec------CCEEEEEE
Q 036621 256 LDVTLGIYYQSLSLLILDNVD-HCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN------SSQLLLYE 326 (376)
Q Consensus 256 ~~~~l~~~~G~L~~~~~~~~~-~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~yd 326 (376)
...++..+|+|+++...... ..-.+|+++- .+|+.+..+ |...... .++..++.|++..+ ...+..||
T Consensus 193 -~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 193 -NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKGVTV-KCAAVGSIVYVLAGFQGVGRLGHILEYN 269 (306)
T ss_dssp -SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCBSCC-EEEEETTEEEEEECBCSSSBCCEEEEEE
T ss_pred -cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCccce-eEEEECCEEEEEeCcCCCeeeeeEEEEc
Confidence 45677789999999874211 1124555554 899998777 6554322 33334677777654 14699999
Q ss_pred CCCCCEEEEEE
Q 036621 327 PGTGELRDFEL 337 (376)
Q Consensus 327 ~~~~~~~~v~~ 337 (376)
+++++|+++..
T Consensus 270 ~~~~~W~~~~~ 280 (306)
T 3ii7_A 270 TETDKWVANSK 280 (306)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEeCCC
Confidence 99999999864
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.46 E-value=7.8e-12 Score=113.40 Aligned_cols=209 Identities=10% Similarity=0.044 Sum_probs=141.4
Q ss_pred cceeceEEEecCC----------CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCC
Q 036621 106 GLYCGIVFIEGLN----------NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEK 175 (376)
Q Consensus 106 ~s~~Gll~~~~~~----------~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~ 175 (376)
...+|.|.+..+. ..+.++||.|++|..+|+++...... . ...++ =+++.++. +..
T Consensus 67 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~-----~~iyv~GG-~~~- 132 (308)
T 1zgk_A 67 CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI------G-VGVID-----GHIYAVGG-SHG- 132 (308)
T ss_dssp EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC------E-EEEET-----TEEEEECC-EET-
T ss_pred EEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc------E-EEEEC-----CEEEEEcC-CCC-
Confidence 3456777666532 46999999999999999877543221 1 11122 14555532 111
Q ss_pred CCCCcccceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCC
Q 036621 176 RDSSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILES 254 (376)
Q Consensus 176 ~~~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~ 254 (376)
.... ..+++|+..+++|+.++.+|..... ...+.++|.+|.+++.........+..||+.+++|+.+ ++|....
T Consensus 133 -~~~~--~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~- 207 (308)
T 1zgk_A 133 -CIHH--NSVERYEPERDEWHLVAPMLTRRIG-VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS- 207 (308)
T ss_dssp -TEEC--CCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-
T ss_pred -Cccc--ccEEEECCCCCeEeECCCCCccccc-eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-
Confidence 1112 5799999999999999988775444 56888899999998764332356799999999999998 5565443
Q ss_pred CCceEEEEECCeEEEEEEecC-CCEEEEEEec--CCceeeEEEEccCCceeEeEEEeeCCcEEEEec------CCEEEEE
Q 036621 255 SLDVTLGIYYQSLSLLILDNV-DHCFKIWVMR--KKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN------SSQLLLY 325 (376)
Q Consensus 255 ~~~~~l~~~~G~L~~~~~~~~-~~~l~iW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~y 325 (376)
....+..+|+|+++..... ...-++|+++ ..+|+++..+ |...... .++..+++|++..+ ...+..|
T Consensus 208 --~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~v~~y 283 (308)
T 1zgk_A 208 --GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM-KHRRSAL-GITVHQGRIYVLGGYDGHTFLDSVECY 283 (308)
T ss_dssp --SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC-SSCCBSC-EEEEETTEEEEECCBCSSCBCCEEEEE
T ss_pred --cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC-CCCccce-EEEEECCEEEEEcCcCCCcccceEEEE
Confidence 3556778999999987421 1223455555 4999998877 5554322 23334677777643 2469999
Q ss_pred ECCCCCEEEEEE
Q 036621 326 EPGTGELRDFEL 337 (376)
Q Consensus 326 d~~~~~~~~v~~ 337 (376)
|+++++|+++.-
T Consensus 284 d~~~~~W~~~~~ 295 (308)
T 1zgk_A 284 DPDTDTWSEVTR 295 (308)
T ss_dssp ETTTTEEEEEEE
T ss_pred cCCCCEEeecCC
Confidence 999999999854
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.46 E-value=2.5e-11 Score=110.50 Aligned_cols=194 Identities=13% Similarity=0.152 Sum_probs=133.1
Q ss_pred EEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEeccC
Q 036621 121 ITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNLKP 200 (376)
Q Consensus 121 ~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~ 200 (376)
++++||.|++|..+|+++...... ... .++ =+++.++. +........ ..+++|+..+++|+.+++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~------~~~-~~~-----~~iyv~GG-~~~~~~~~~--~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF------GLG-EVD-----DKIYVVAG-KDLQTEASL--DSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC------EEE-EET-----TEEEEEEE-EBTTTCCEE--EEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCcccccc------ceE-EEC-----CEEEEEcC-ccCCCCccc--ceEEEEeCCCCCEeECCC
Confidence 889999999999999877643221 111 111 14555543 221111222 689999999999999998
Q ss_pred CCccccCCcceeEeCceEEEEecccCC-CCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEecCC-C
Q 036621 201 IDYTMRLSSERTYFDGAFYWLLKLEND-NDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDNVD-H 277 (376)
Q Consensus 201 ~p~~~~~~~~~v~~~G~lYwl~~~~~~-~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~-~ 277 (376)
+|..... ...+.++|.+|.+++.... .....+..||+.+++|+.+ ++|.... ....+..+|+|+++...... .
T Consensus 145 ~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~ 220 (318)
T 2woz_A 145 LPIKVYG-HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS---MFGVAIHKGKIVIAGGVTEDGL 220 (318)
T ss_dssp CSSCEES-CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB---SCEEEEETTEEEEEEEEETTEE
T ss_pred CCCcccc-cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc---cceEEEECCEEEEEcCcCCCCc
Confidence 8875444 5688899999999975321 1345799999999999999 5665443 35567789999999984222 2
Q ss_pred EEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEec---------------CCEEEEEECCCCCEEEE
Q 036621 278 CFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN---------------SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 278 ~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~yd~~~~~~~~v 335 (376)
.-.+|+++- .+|+.+..+ |...... .++..++.|++..+ ...+..||+++++|+++
T Consensus 221 ~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 221 SASVEAFDLKTNKWEVMTEF-PQERSSI-SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEEEEEETTTCCEEECCCC-SSCCBSC-EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred cceEEEEECCCCeEEECCCC-CCcccce-EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 235666654 899998877 6554322 23344577776643 13589999999999998
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.45 E-value=1.7e-11 Score=111.51 Aligned_cols=196 Identities=8% Similarity=0.012 Sum_probs=135.0
Q ss_pred eEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecC-CCCCCcccceEEEEEcCCCceEec
Q 036621 120 RITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDE-KRDSSCAFSLVAVYTLRTNSWKNL 198 (376)
Q Consensus 120 ~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~-~~~~~~~~~~~~vyss~t~~W~~~ 198 (376)
.++++||.|++|..+|+++...... .. ..++ + +++.++. +.. +..... ..+++|+..+++|+.+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~------~~-~~~~----~-~lyv~GG-~~~~~~~~~~--~~~~~~d~~~~~W~~~ 132 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLF------GL-GEAL----N-SIYVVGG-REIKDGERCL--DSVMCYDRLSFKWGES 132 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESC------EE-EEET----T-EEEEECC-EESSTTCCBC--CCEEEEETTTTEEEEC
T ss_pred ceEEecCCCCeEEECCCCCcchhce------eE-EEEC----C-EEEEEeC-CcCCCCCccc--ceEEEECCCCCcEeEC
Confidence 3899999999999999877542221 11 1111 1 4555533 211 112222 6899999999999999
Q ss_pred cCCCccccCCcceeEeCceEEEEeccc-CCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEecCC
Q 036621 199 KPIDYTMRLSSERTYFDGAFYWLLKLE-NDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDNVD 276 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~~G~lYwl~~~~-~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~ 276 (376)
+++|..... ...+.++|.+|.+++.. .......+..||+.+++|+.+ ++|..+. ....+..+|+|+++......
T Consensus 133 ~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~ 208 (315)
T 4asc_A 133 DPLPYVVYG-HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS---LFGATVHDGRIIVAAGVTDT 208 (315)
T ss_dssp CCCSSCCBS-CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB---SCEEEEETTEEEEEEEECSS
T ss_pred CCCCCcccc-eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh---ceEEEEECCEEEEEeccCCC
Confidence 988875544 66888999999999863 222456899999999999998 5665544 35667889999999984322
Q ss_pred -CEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEecC---------------CEEEEEECCCCCEEEEE
Q 036621 277 -HCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS---------------SQLLLYEPGTGELRDFE 336 (376)
Q Consensus 277 -~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~yd~~~~~~~~v~ 336 (376)
..-.+|+++- .+|+.+..+ |...... .++..++.|++..+. ..+..||+++++|+++.
T Consensus 209 ~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 209 GLTSSAEVYSITDNKWAPFEAF-PQERSSL-SLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp SEEEEEEEEETTTTEEEEECCC-SSCCBSC-EEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CccceEEEEECCCCeEEECCCC-CCcccce-eEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 2336677665 899999877 6555322 233345677665431 24889999999999993
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.43 E-value=2.8e-11 Score=109.24 Aligned_cols=209 Identities=8% Similarity=0.064 Sum_probs=141.7
Q ss_pred cceeceEEEecC------CCeEEEEecCccc---ceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCC
Q 036621 106 GLYCGIVFIEGL------NNRITLWNIATRE---SITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKR 176 (376)
Q Consensus 106 ~s~~Gll~~~~~------~~~~~v~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 176 (376)
...+|.|.+..+ ...++++||.|++ |..+++.+...... . ...++ =+++.++. +. .
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~------~-~~~~~-----~~lyv~GG-~~--~ 123 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA------G-ATTLG-----DMIYVSGG-FD--G 123 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC------E-EEEET-----TEEEEECC-BC--S
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce------e-EEEEC-----CEEEEEcc-cC--C
Confidence 345677766543 3579999999999 99998877543222 1 11122 24555532 11 1
Q ss_pred CCCcccceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCC
Q 036621 177 DSSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESS 255 (376)
Q Consensus 177 ~~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~ 255 (376)
.... ..+++|+..+++|+.++.+|..... ...+.++|.+|.+++.........+..||+.+++|+.+ ++|....
T Consensus 124 ~~~~--~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-- 198 (301)
T 2vpj_A 124 SRRH--TSMERYDPNIDQWSMLGDMQTAREG-AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS-- 198 (301)
T ss_dssp SCBC--CEEEEEETTTTEEEEEEECSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB--
T ss_pred Cccc--ceEEEEcCCCCeEEECCCCCCCccc-ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc--
Confidence 1122 5899999999999999877764444 56888899999998764332356799999999999998 5665544
Q ss_pred CceEEEEECCeEEEEEEecC---CCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecC------CEEEEEE
Q 036621 256 LDVTLGIYYQSLSLLILDNV---DHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS------SQLLLYE 326 (376)
Q Consensus 256 ~~~~l~~~~G~L~~~~~~~~---~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~yd 326 (376)
...++..+|+|+++..... ...+.++-++..+|+.+..+ |...... .++..++.|++..+. ..+..||
T Consensus 199 -~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~v~~yd 275 (301)
T 2vpj_A 199 -GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCYV-GATVLRGRLYAIAGYDGNSLLSSIECYD 275 (301)
T ss_dssp -SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBSC-EEEEETTEEEEECCBCSSSBEEEEEEEE
T ss_pred -cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccce-eEEEECCEEEEEcCcCCCcccccEEEEc
Confidence 3567778999999988432 23344444444899998877 6554322 233346777776541 3589999
Q ss_pred CCCCCEEEEEE
Q 036621 327 PGTGELRDFEL 337 (376)
Q Consensus 327 ~~~~~~~~v~~ 337 (376)
+++++|+.+.-
T Consensus 276 ~~~~~W~~~~~ 286 (301)
T 2vpj_A 276 PIIDSWEVVTS 286 (301)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEEcCC
Confidence 99999999864
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.43 E-value=3.1e-11 Score=108.99 Aligned_cols=208 Identities=13% Similarity=0.158 Sum_probs=141.4
Q ss_pred cceeceEEEecC------CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCC
Q 036621 106 GLYCGIVFIEGL------NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSS 179 (376)
Q Consensus 106 ~s~~Gll~~~~~------~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 179 (376)
...+|.|.+..+ ...+.++||.|++|..+|+++...... ... .++ . +++.++. +.. ...
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~------~~~-~~~----~-~iyv~GG-~~~--~~~ 122 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL------GAA-VLN----G-LLYAVGG-FDG--STG 122 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC------EEE-EET----T-EEEEEEE-ECS--SCE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce------EEE-EEC----C-EEEEEcC-CCC--Ccc
Confidence 345777766653 356999999999999999877543221 111 122 1 4555543 221 122
Q ss_pred cccceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCC--CceEEEEEEcCccceeee-cCCCCCCCCC
Q 036621 180 CAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDN--DSYVILSFNMADEKFQEI-QGPCILESSL 256 (376)
Q Consensus 180 ~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~--~~~~il~fD~~~~~~~~i-~~P~~~~~~~ 256 (376)
. ..+++|+..++.|+.++.+|..... ...+.++|.+|.+++..... ....+..||+.+++|+.+ ++|....
T Consensus 123 ~--~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--- 196 (302)
T 2xn4_A 123 L--SSVEAYNIKSNEWFHVAPMNTRRSS-VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS--- 196 (302)
T ss_dssp E--EEEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB---
T ss_pred C--ceEEEEeCCCCeEeecCCCCCcccC-ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc---
Confidence 2 5799999999999999988775444 56888999999998764321 145699999999999998 5665543
Q ss_pred ceEEEEECCeEEEEEEecCCC-EEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEecC------CEEEEEEC
Q 036621 257 DVTLGIYYQSLSLLILDNVDH-CFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS------SQLLLYEP 327 (376)
Q Consensus 257 ~~~l~~~~G~L~~~~~~~~~~-~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~yd~ 327 (376)
...++..+|+|+++....... .-++|+++- ..|+.+..+ +...... .++..++.|++..+. ..+..||+
T Consensus 197 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 197 GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRNA-GVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBSC-EEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCccccC-eEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 356778899999998842211 224555554 899998877 5544322 233346777776541 34999999
Q ss_pred CCCCEEEEE
Q 036621 328 GTGELRDFE 336 (376)
Q Consensus 328 ~~~~~~~v~ 336 (376)
++++|+.+.
T Consensus 275 ~~~~W~~~~ 283 (302)
T 2xn4_A 275 TTDKWTVVS 283 (302)
T ss_dssp TTTEEEECS
T ss_pred CCCeEEECC
Confidence 999999986
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.39 E-value=9.3e-11 Score=105.73 Aligned_cols=197 Identities=11% Similarity=0.070 Sum_probs=134.6
Q ss_pred CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCc---
Q 036621 118 NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNS--- 194 (376)
Q Consensus 118 ~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~--- 194 (376)
...++++||.|++|..+|..+...... . ....+ =+++.++. + ...... ..+++|+..++.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~-----~~l~v~GG-~--~~~~~~--~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYV------A-SVSLH-----DRIYVIGG-Y--DGRSRL--SSVECLDYTADEDGV 92 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSC------E-EEEET-----TEEEEECC-B--CSSCBC--CCEEEEETTCCTTCC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccc------c-EEEEC-----CEEEEEcC-C--CCCccC--ceEEEEECCCCCCCe
Confidence 357999999999999999766532211 1 11122 14555532 1 111122 579999999999
Q ss_pred eEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEe
Q 036621 195 WKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILD 273 (376)
Q Consensus 195 W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~ 273 (376)
|+.++.+|..... ...+.++|.+|.+++.........+..||+.+++|+.+ ++|.... ....+..+|+|+++...
T Consensus 93 W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 93 WYSVAPMNVRRGL-AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE---GAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CEEECCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB---SCEEEEETTEEEEECCB
T ss_pred eEECCCCCCCccc-eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc---cceEEEECCEEEEECCC
Confidence 9999988775544 66888999999998764332356899999999999998 6665544 35567789999999884
Q ss_pred cCC-CEEEEEEec--CCceeeEEEEccCCceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEEEEEE
Q 036621 274 NVD-HCFKIWVMR--KKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 274 ~~~-~~l~iW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~~v~~ 337 (376)
... ..-.+|+++ ...|+.+..+ |.... ...++..++.|++..+ ...+..||+++++|+++..
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPM-ATKRS-GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS 239 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCC-SSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCCcccceEEEEeCCCCcEEeCCCC-Ccccc-cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC
Confidence 211 223455555 4999998766 55443 2233344677777654 2359999999999999864
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.37 E-value=1.1e-10 Score=105.58 Aligned_cols=196 Identities=9% Similarity=-0.035 Sum_probs=134.8
Q ss_pred CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEe
Q 036621 118 NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKN 197 (376)
Q Consensus 118 ~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (376)
...+.++||.+++|..+++++...... ... ..+ + +++.++. + . .... ..+++|+..+++|+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~------~~~-~~~----~-~lyv~GG-~--~-~~~~--~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDA------ACV-FWD----N-VVYILGG-S--Q-LFPI--KRMDCYNVVKDSWYS 84 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSC------EEE-EET----T-EEEEECC-B--S-SSBC--CEEEEEETTTTEEEE
T ss_pred CceEEEecCCCCCEecCCCCCccccee------EEE-EEC----C-EEEEEeC-C--C-CCCc--ceEEEEeCCCCeEEE
Confidence 568999999999999999877543221 111 122 1 3444432 1 1 1222 689999999999999
Q ss_pred ccCCCccccCCcceeEeCceEEEEeccc-CCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEecC
Q 036621 198 LKPIDYTMRLSSERTYFDGAFYWLLKLE-NDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDNV 275 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~~G~lYwl~~~~-~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~~ 275 (376)
++.+|..... ...+.++|.+|.+++.. .......+..||+.+++|+.+ ++|.... ....+..+|+|+++.....
T Consensus 85 ~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 85 KLGPPTPRDS-LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC---SHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp EECCSSCCBS-CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB---SCEEEEETTEEEEECCEES
T ss_pred CCCCCccccc-eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc---eeEEEEECCEEEEECCCCC
Confidence 9988775444 66888999999999764 222356799999999999998 6665544 3566778999999998321
Q ss_pred CC-----EEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEEEEEE
Q 036621 276 DH-----CFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 276 ~~-----~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~~v~~ 337 (376)
.. .-.+|.++- ..|+.+..+ +...... .++..++.|++..+ ...+..||+++++|+++..
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELCPM-IEARKNH-GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEECCC-SSCCBSC-EEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCC
T ss_pred CCCcccccceEEEeCCCCCeEEECCCc-cchhhcc-eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC
Confidence 11 234555554 999999877 5544322 23334677777643 1359999999999999853
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.36 E-value=1.5e-10 Score=104.44 Aligned_cols=196 Identities=8% Similarity=0.075 Sum_probs=133.7
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEec
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNL 198 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (376)
..+.++||.+++|..+++.+...... .. ...+ =+++.++. + ...... ..+++|+..+++|+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~------~~-~~~~-----~~lyv~GG-~--~~~~~~--~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRA------GM-VYMA-----GLVFAVGG-F--NGSLRV--RTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC------EE-EEET-----TEEEEESC-B--CSSSBC--CCEEEEETTTTEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccc------eE-EEEC-----CEEEEEeC-c--CCCccc--cceEEECCCCCceeeC
Confidence 56899999999999998776542221 11 1111 23444422 1 111222 5789999999999999
Q ss_pred cCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEecCCC
Q 036621 199 KPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDNVDH 277 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~ 277 (376)
+.+|..... ...+.++|.+|.+++.........+..||+.+++|+.+ ++|.... ....+..+|+|+++.......
T Consensus 93 ~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 93 ANMRDRRST-LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS---SVGVGVVGGLLYAVGGYDVAS 168 (302)
T ss_dssp CCCSSCCBS-CEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB---SCEEEEETTEEEEECCEETTT
T ss_pred CCCCccccc-eEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc---CceEEEECCEEEEEeCCCCCC
Confidence 988775444 66888999999999764332346799999999999998 5665443 356677899999998842221
Q ss_pred ---EEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEEEEEE
Q 036621 278 ---CFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 278 ---~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~~v~~ 337 (376)
.-.+|.++- ..|+.+..+ |...... .++..++.|++..+ ...+..||+++++|+++..
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEM-STRRSGA-GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCC-SSCCBSC-EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred CccccEEEEEeCCCCcEEECCCC-ccccccc-cEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 123555554 999999877 5554322 33344677777654 2359999999999999864
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.32 E-value=8.8e-11 Score=106.42 Aligned_cols=199 Identities=9% Similarity=0.011 Sum_probs=132.9
Q ss_pred CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecC--CCCCCcccceEEEEEcCCCce
Q 036621 118 NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDE--KRDSSCAFSLVAVYTLRTNSW 195 (376)
Q Consensus 118 ~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~--~~~~~~~~~~~~vyss~t~~W 195 (376)
...+.++||.+++|..+++.+...... .+. ..+ =+++.++. ... ...... ..+++|+..++.|
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~------~~~-~~~-----~~lyv~GG-~~~~~~~~~~~--~~~~~~d~~~~~W 102 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGL------AGC-VVG-----GLLYAVGG-RNNSPDGNTDS--SALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSC------EEE-EET-----TEEEEECC-EEEETTEEEEC--CCEEEEETTTTEE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccc------eEE-EEC-----CEEEEECC-CcCCCCCCeec--ceEEEECCCCCeE
Confidence 457999999999999998776543221 111 111 13444422 100 111112 5789999999999
Q ss_pred EeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEec
Q 036621 196 KNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDN 274 (376)
Q Consensus 196 ~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~ 274 (376)
+.++.+|..... ...+.++|.+|.+++.........+..||+.+++|+.+ ++|.... ....+..+|+|+++....
T Consensus 103 ~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNR-IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI---GVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBT-CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB---SCEEEEETTEEEEECCBC
T ss_pred eECCCCCcCccc-cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc---ceEEEEECCEEEEEeCCC
Confidence 999988775444 66888899999998754322245789999999999998 6665544 355677799999998842
Q ss_pred CC-CEEEEEEec--CCceeeEEEEccCCceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEEEEEE
Q 036621 275 VD-HCFKIWVMR--KKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 275 ~~-~~l~iW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~~v~~ 337 (376)
.. ..-.+|.++ ..+|+.+..+ |...... .++..++.|++..+ ...+..||+++++|+++..
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAM-NTIRSGA-GVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCC-SSCCBSC-EEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CCCcCceEEEEeCCCCeEeeCCCC-CCccccc-eEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 11 122445554 4999998777 5554322 23334677777653 1459999999999999864
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.29 E-value=8.1e-10 Score=100.32 Aligned_cols=202 Identities=12% Similarity=0.108 Sum_probs=131.1
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEe-cCCCCCCcccceEEEEEcCCCceEe
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLW-DEKRDSSCAFSLVAVYTLRTNSWKN 197 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~-~~~~~~~~~~~~~~vyss~t~~W~~ 197 (376)
..+.++||.|++|.. ++.+...... ..+... ..+ +++.++... ............+++|+..+++|+.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~------~~~~~~--~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKN------HVSLVT--KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSS------EEEEEC--TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCcc------ceEEEE--ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 689999999999986 3332211111 122221 122 244443311 1111112211358999999999999
Q ss_pred ccCCCccccCCcceeEeCceEEEEecccC---CCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEe
Q 036621 198 LKPIDYTMRLSSERTYFDGAFYWLLKLEN---DNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILD 273 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~~G~lYwl~~~~~---~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~ 273 (376)
++++|..... ...+.++|.+|.+++... ......+..||+.+++|+.+ ++|..+. ....+..+|+|+++...
T Consensus 82 ~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 82 MPPLPSPRCL-FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY---GHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp CCCBSSCEES-CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB---SCEEEEETTEEEEECCB
T ss_pred CCCCCcchhc-eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc---ceeEEEECCEEEEEeCC
Confidence 9988875444 668889999999998531 22456799999999999998 6666554 35667789999999884
Q ss_pred -c-CCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEecC------CEEEEEECCCCCEEEEEE
Q 036621 274 -N-VDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS------SQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 274 -~-~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~yd~~~~~~~~v~~ 337 (376)
. ....-++|+++- .+|+++..+ |...... .++..++.|++..+. ..+..||+++++|+.+..
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPM-QTARSLF-GATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCC-SSCCBSC-EEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred CCCCcccceEEEEeCCCCeEEECCCC-CCchhce-EEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 2 122235566654 899998877 6554322 233446777776541 259999999999999864
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.20 E-value=1.6e-09 Score=98.55 Aligned_cols=211 Identities=10% Similarity=0.086 Sum_probs=132.8
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEE-ecCCCCCCcccceEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTL-WDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~-~~~~~~~~~~~~~~~v 187 (376)
++.|++..+ ....++||.|++|...|.+...... ..+... ..+ +++.++.. +..+.........+++
T Consensus 15 ~~~i~~~GG-~~~~~yd~~~~~W~~~~~~~~~~r~-------~~~~~~--~~~--~lyv~GG~~~~~~~~~~~~~~~~~~ 82 (318)
T 2woz_A 15 KDLILLVND-TAAVAYDPMENECYLTALAEQIPRN-------HSSIVT--QQN--QVYVVGGLYVDEENKDQPLQSYFFQ 82 (318)
T ss_dssp EEEEEEECS-SEEEEEETTTTEEEEEEECTTSCSS-------EEEEEC--SSS--CEEEEESSCC-------CCCBEEEE
T ss_pred cchhhhccc-cceEEECCCCCceecccCCccCCcc-------ceEEEE--ECC--EEEEECCcccCccccCCCccccEEE
Confidence 456655555 4589999999999984432211111 112111 111 24444320 0011111111134899
Q ss_pred EEcCCCceEeccCCCccccCCcceeEeCceEEEEecccC--CCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEEC
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLEN--DNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYY 264 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~--~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~ 264 (376)
|+..+++|+.++.+|..... ...+.++|.+|.+++... ......+..||+.+++|+.+ ++|..+. ....+..+
T Consensus 83 ~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~ 158 (318)
T 2woz_A 83 LDNVSSEWVGLPPLPSARCL-FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY---GHNVISHN 158 (318)
T ss_dssp EETTTTEEEECSCBSSCBCS-CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE---SCEEEEET
T ss_pred EeCCCCcEEECCCCCccccc-cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc---ccEEEEEC
Confidence 99999999999888775444 668889999999998642 12346799999999999998 6666544 34566689
Q ss_pred CeEEEEEEecC--CCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEec--C----CEEEEEECCCCCEEE
Q 036621 265 QSLSLLILDNV--DHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN--S----SQLLLYEPGTGELRD 334 (376)
Q Consensus 265 G~L~~~~~~~~--~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~----~~~~~yd~~~~~~~~ 334 (376)
|+|+++..... ...-++|+++- .+|+.+..+ |...... .++..++.|++..+ + ..+..||+++++|++
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSMF-GVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBSC-EEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCcccc-eEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 99999988421 11224566554 899998877 5544322 22334677777643 1 358899999999999
Q ss_pred EEE
Q 036621 335 FEL 337 (376)
Q Consensus 335 v~~ 337 (376)
+..
T Consensus 237 ~~~ 239 (318)
T 2woz_A 237 MTE 239 (318)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.20 E-value=1.6e-09 Score=100.12 Aligned_cols=215 Identities=12% Similarity=0.044 Sum_probs=134.6
Q ss_pred ceeceEEEecC--CCeEEEEecC--cccceecCCCc-cCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcc
Q 036621 107 LYCGIVFIEGL--NNRITLWNIA--TRESITLPKYR-AIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCA 181 (376)
Q Consensus 107 s~~Gll~~~~~--~~~~~v~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 181 (376)
..+|.|.+..+ ...++++||. +++|..+|+.+ ...... . ...++ + +++.++............
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~------~-~~~~~---~--~lyv~GG~~~~~~~~~~~ 84 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA------T-SAFID---G--NLYVFGGIGKNSEGLTQV 84 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC------E-EEEET---T--EEEEECCEEECTTSCEEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc------e-EEEEC---C--EEEEEcCCCCCCCcccee
Confidence 33777766653 4689999998 49999999877 332211 1 11222 1 455553310100111111
Q ss_pred cceEEEEEcCCCceEeccCCC-ccccCCcceeEeCceEEEEecccCCC--------------------------------
Q 036621 182 FSLVAVYTLRTNSWKNLKPID-YTMRLSSERTYFDGAFYWLLKLENDN-------------------------------- 228 (376)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~p-~~~~~~~~~v~~~G~lYwl~~~~~~~-------------------------------- 228 (376)
...+++|+..+++|+.++.++ ..+.. ...+.++|.+|.+++.....
T Consensus 85 ~~~v~~yd~~~~~W~~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 85 FNDVHKYNPKTNSWVKLMSHAPMGMAG-HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp CCCEEEEETTTTEEEECSCCCSSCCSS-EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred eccEEEEeCCCCcEEECCCCCCccccc-ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 257999999999999999776 44433 55677999999999753110
Q ss_pred --CceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEecCC--CEEEEEEec----CCceeeEEEEccCC
Q 036621 229 --DSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDNVD--HCFKIWVMR----KKNWIKQLTVGPFI 299 (376)
Q Consensus 229 --~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~--~~l~iW~l~----~~~W~~~~~i~~~~ 299 (376)
....+.+||+.+++|+.+ ++|..... ...++..+|+|+++...... ..-++|.++ ...|+.+..+ +.+
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~~p~~~~~--~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~ 240 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGESPWYGTA--GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSP 240 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEECSSCCCB--SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS-STT
T ss_pred cCCcccEEEEeCCCCcEEECCCCCCCCcc--cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCC
Confidence 125899999999999998 66644322 25677889999999873211 123456553 2899998776 544
Q ss_pred ce-eEeEEEeeCCcEEEEecC-----------------------CEEEEEECCCCCEEEEEE
Q 036621 300 GI-FQPLLFWKKGAFFVESNS-----------------------SQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 300 ~~-~~~~~~~~~~~l~~~~~~-----------------------~~~~~yd~~~~~~~~v~~ 337 (376)
.- ....++..++.|++..+. ..+..||+++++|+++.-
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 32 222344556777776541 147899999999999864
No 14
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.16 E-value=1.4e-11 Score=108.96 Aligned_cols=53 Identities=21% Similarity=0.448 Sum_probs=48.8
Q ss_pred CccCCCCCCcHHHHHHHHccCCccccc-cccccchhhHhhcCChHHHHHHHhcC
Q 036621 1 MVLLGNDDSPEDITIEILSRLPVKSLI-RLRCVCKSWYALIKDPNFISMHLKND 53 (376)
Q Consensus 1 ~~~~~~~~LP~Dll~~IL~rLp~~~l~-r~r~VcK~W~~lis~p~F~~~~~~~~ 53 (376)
|+++.++.||+||+.+||+|||+++|+ ||++|||+|++++++|.|.+++..++
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 446678899999999999999999999 99999999999999999999998776
No 15
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.09 E-value=4e-11 Score=78.17 Aligned_cols=44 Identities=30% Similarity=0.634 Sum_probs=39.1
Q ss_pred CCCCCCcHHHHHHHHccCCccccccccccchhhHhhcCChHHHH
Q 036621 4 LGNDDSPEDITIEILSRLPVKSLIRLRCVCKSWYALIKDPNFIS 47 (376)
Q Consensus 4 ~~~~~LP~Dll~~IL~rLp~~~l~r~r~VcK~W~~lis~p~F~~ 47 (376)
..+..||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 45789999999999999999999999999999999999988744
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.00 E-value=3.5e-08 Score=91.02 Aligned_cols=215 Identities=9% Similarity=0.035 Sum_probs=130.0
Q ss_pred cceeceEEEecCC-----------CeEEEEecCcccceecCCCc-cCCCCccccccceEEEeeeCCCCCeEEEEEEEEec
Q 036621 106 GLYCGIVFIEGLN-----------NRITLWNIATRESITLPKYR-AIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWD 173 (376)
Q Consensus 106 ~s~~Gll~~~~~~-----------~~~~v~NP~T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~ 173 (376)
+..+|.|.+..+. ..+.++||.|++|..+++++ ... .. .....++ =+++.++. +.
T Consensus 62 ~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r-~~------~~~~~~~-----~~iyv~GG-~~ 128 (357)
T 2uvk_A 62 AFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGM-AG------HVTFVHN-----GKAYVTGG-VN 128 (357)
T ss_dssp EEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCC-SS------EEEEEET-----TEEEEEEC-CC
T ss_pred EEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccc-cc------ceEEEEC-----CEEEEEeC-cC
Confidence 3456777665432 46999999999999999876 221 11 1111122 14555533 11
Q ss_pred CCCC------------------------------CCcccceEEEEEcCCCceEeccCCCc-cccCCcceeEeCceEEEEe
Q 036621 174 EKRD------------------------------SSCAFSLVAVYTLRTNSWKNLKPIDY-TMRLSSERTYFDGAFYWLL 222 (376)
Q Consensus 174 ~~~~------------------------------~~~~~~~~~vyss~t~~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~ 222 (376)
.... .......+++|+..+++|+.+..+|. .... ...+.++|.+|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~~~~iyv~G 207 (357)
T 2uvk_A 129 QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNKGDKTWLIN 207 (357)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBS-CEEEEETTEEEEEC
T ss_pred CCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCccc-ccEEEECCEEEEEe
Confidence 1100 00011589999999999999987776 2332 56888999999998
Q ss_pred cccCC-CCceEEEEEEc--Cccceeee-cCCCCCCCCCceEEEEECCeEEEEEEecCC------------------CEEE
Q 036621 223 KLEND-NDSYVILSFNM--ADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILDNVD------------------HCFK 280 (376)
Q Consensus 223 ~~~~~-~~~~~il~fD~--~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~------------------~~l~ 280 (376)
+.... .....+..||+ .+.+|+.+ ++|..... .....+..+|+|+++...... ..-.
T Consensus 208 G~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~ 286 (357)
T 2uvk_A 208 GEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS 286 (357)
T ss_dssp CEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC
T ss_pred eecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-ccceEEEECCEEEEEcCccccCCcccccccceeccccccceee
Confidence 65321 12345777876 89999988 44433221 234578889999999883211 1134
Q ss_pred EEEec--CCceeeEEEEccCCceeEeEEEeeCCcEEEEec-C------CEEEEEECCCCCEEEEEE
Q 036621 281 IWVMR--KKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN-S------SQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 281 iW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~------~~~~~yd~~~~~~~~v~~ 337 (376)
+|+++ ..+|+++..+ |..... ..++..+++|++..+ + ..++.+++++++|.+...
T Consensus 287 ~~~yd~~~~~W~~~~~~-p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 287 TDIHLWHNGKWDKSGEL-SQGRAY-GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CEEEECC---CEEEEEC-SSCCBS-SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred EEEEecCCCceeeCCCC-CCCccc-ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 45544 4999999888 665543 233445678877654 1 248889999999987654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.98 E-value=2.2e-08 Score=100.74 Aligned_cols=210 Identities=14% Similarity=0.100 Sum_probs=132.6
Q ss_pred eeceEEEecC-----CCeEEEEecCcccceecC-CC-----ccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCC
Q 036621 108 YCGIVFIEGL-----NNRITLWNIATRESITLP-KY-----RAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKR 176 (376)
Q Consensus 108 ~~Gll~~~~~-----~~~~~v~NP~T~~~~~LP-~~-----~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 176 (376)
.+|.|.+..+ .+.++++||.+++|..++ +. +.... . .+....... =+++.++. +...
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~-~-------hs~~~~~~~--~~lyv~GG-~~~~- 463 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARM-C-------HTFTTISRN--NQLLLIGG-RKAP- 463 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCB-S-------CEEEEETTT--TEEEEECC-BSST-
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcccc-c-------eEEEEEccC--CEEEEEcC-CCCC-
Confidence 4676766654 356999999999999998 42 22111 1 111111101 13555532 1111
Q ss_pred CCCcccceEEEEEcCCCceEeccCCCccccCCcceeEe-CceEEEEecccCCCCceEEEEEEcCccceeeec----CCCC
Q 036621 177 DSSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF-DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQ----GPCI 251 (376)
Q Consensus 177 ~~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~-~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~----~P~~ 251 (376)
.... ..+++|+..++.|+.++.+|..... ..++.+ +|.+|.+++.... . .+..||+.+++|+.+. +|..
T Consensus 464 ~~~~--~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~--~-~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 464 HQGL--SDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEG--P-AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp TCBC--CCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSS--C-SEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCcc--ccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCC--C-CEEEEECCCCceEEccCCCCCCCc
Confidence 1112 5799999999999999988875444 556775 9999999976432 2 7999999999999985 4544
Q ss_pred CCCCCceEEEEEC---CeEEEEEEecC-----CCEEEEEEecCCc------eeeEEEEccCCceeEeEEEeeCCcEEEEe
Q 036621 252 LESSLDVTLGIYY---QSLSLLILDNV-----DHCFKIWVMRKKN------WIKQLTVGPFIGIFQPLLFWKKGAFFVES 317 (376)
Q Consensus 252 ~~~~~~~~l~~~~---G~L~~~~~~~~-----~~~l~iW~l~~~~------W~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 317 (376)
... ...++++ |+|+++++... ...+.+|.++... |+.+..+.+.........+..++.|++..
T Consensus 538 r~~---~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 538 SLV---SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVG 614 (695)
T ss_dssp CCB---SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEEC
T ss_pred ccc---eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEEC
Confidence 432 2323334 88999988421 2445555555566 88887751233333333334447787765
Q ss_pred c---------CCEEEEEECCCCCEEEEEEe
Q 036621 318 N---------SSQLLLYEPGTGELRDFELE 338 (376)
Q Consensus 318 ~---------~~~~~~yd~~~~~~~~v~~~ 338 (376)
+ ...+..||+++++|+.+.+.
T Consensus 615 G~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 615 GTSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp CBCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred CccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 4 13599999999999966543
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.89 E-value=4.3e-06 Score=79.09 Aligned_cols=284 Identities=12% Similarity=0.089 Sum_probs=143.5
Q ss_pred CCCCcHHHHHHHHccCCccccccccccchhhHhhcCChHHHHHHHhcCCC-CceEEEEeeeCCC--CCCCcceeeeecCC
Q 036621 6 NDDSPEDITIEILSRLPVKSLIRLRCVCKSWYALIKDPNFISMHLKNDVN-TRLIVLYAKEDDT--EEHSHPKEYFCLFP 82 (376)
Q Consensus 6 ~~~LP~Dll~~IL~rLp~~~l~r~r~VcK~W~~lis~p~F~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 82 (376)
++.||+|++.+||+.|++++|.++++|||+|+.++.++.+-+........ .+...-....... ....+-........
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~~~ 98 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHR 98 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhhhh
Confidence 56899999999999999999999999999999999999888776543321 1100000000000 00000000000000
Q ss_pred -CCCceeccC---CCCCCCCccccccccceeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeC
Q 036621 83 -DETLEDLSL---QDLSTQEPVLGSFKGLYCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDP 158 (376)
Q Consensus 83 -~~~~~~~~~---~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~ 158 (376)
..++....+ .....+...-...+...+.+|+.....+.+.+||..+++...--.. .... ...+.+++
T Consensus 99 ~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~------v~~~~~~~ 169 (445)
T 2ovr_B 99 IDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG---HTGG------VWSSQMRD 169 (445)
T ss_dssp HHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCC---CSSC------EEEEEEET
T ss_pred hhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC---CCCC------EEEEEecC
Confidence 000000000 0011111000122333455555555678999999998875532111 1111 34555552
Q ss_pred CCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEe-ccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEE
Q 036621 159 KTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKN-LKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFN 237 (376)
Q Consensus 159 ~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~-~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD 237 (376)
+ .+..+. .+ ..+.+++..++.-.. ....... -.++..+|.....+.. ...|..+|
T Consensus 170 ---~--~l~s~~---~d-------g~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~l~s~s~-----dg~i~~wd 225 (445)
T 2ovr_B 170 ---N--IIISGS---TD-------RTLKVWNAETGECIHTLYGHTST----VRCMHLHEKRVVSGSR-----DATLRVWD 225 (445)
T ss_dssp ---T--EEEEEE---TT-------SCEEEEETTTTEEEEEECCCSSC----EEEEEEETTEEEEEET-----TSEEEEEE
T ss_pred ---C--EEEEEe---CC-------CeEEEEECCcCcEEEEECCCCCc----EEEEEecCCEEEEEeC-----CCEEEEEE
Confidence 2 222211 22 478888887763221 1111110 1234445554444433 45899999
Q ss_pred cCccceee-ecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcE-EE
Q 036621 238 MADEKFQE-IQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAF-FV 315 (376)
Q Consensus 238 ~~~~~~~~-i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l-~~ 315 (376)
+.+.+... +.... . ...-...+|...++... +..+.+|.+... ..+..+..... .+.++.-++.. +.
T Consensus 226 ~~~~~~~~~~~~~~--~---~v~~~~~~~~~l~~~~~--dg~i~iwd~~~~--~~~~~~~~~~~--~v~~~~~~~~~l~~ 294 (445)
T 2ovr_B 226 IETGQCLHVLMGHV--A---AVRCVQYDGRRVVSGAY--DFMVKVWDPETE--TCLHTLQGHTN--RVYSLQFDGIHVVS 294 (445)
T ss_dssp SSSCCEEEEEECCS--S---CEEEEEECSSCEEEEET--TSCEEEEEGGGT--EEEEEECCCSS--CEEEEEECSSEEEE
T ss_pred CCCCcEEEEEcCCc--c---cEEEEEECCCEEEEEcC--CCEEEEEECCCC--cEeEEecCCCC--ceEEEEECCCEEEE
Confidence 88765432 22211 1 22233347877666666 778999987663 23344411111 12222225554 44
Q ss_pred EecCCEEEEEECCCCCEE
Q 036621 316 ESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 316 ~~~~~~~~~yd~~~~~~~ 333 (376)
...++.+.+||+++++..
T Consensus 295 ~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 295 GSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EETTSCEEEEETTTCCEE
T ss_pred EeCCCeEEEEECCCCCEE
Confidence 455778999999887644
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.73 E-value=1.2e-07 Score=94.81 Aligned_cols=208 Identities=9% Similarity=0.020 Sum_probs=129.1
Q ss_pred eceEEEecC------------CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCC
Q 036621 109 CGIVFIEGL------------NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKR 176 (376)
Q Consensus 109 ~Gll~~~~~------------~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 176 (376)
+|.|++..+ ...+.++||.|++|..++.++....... ....+..| =+++.++. + .
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~----~~~~~~~~-----g~lyv~GG-~--~- 263 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC----PGISMDGN-----GQIVVTGG-N--D- 263 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS----CEEEECTT-----SCEEEECS-S--S-
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc----ccccCCCC-----CCEEEeCC-C--C-
Confidence 777776642 1268999999999999987654322110 01222222 23555422 1 1
Q ss_pred CCCcccceEEEEEcCCCceEeccCCCccccCCcceeEe-CceEEEEecccC-CCCceEEEEEEcCccceeeec------C
Q 036621 177 DSSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF-DGAFYWLLKLEN-DNDSYVILSFNMADEKFQEIQ------G 248 (376)
Q Consensus 177 ~~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~-~G~lYwl~~~~~-~~~~~~il~fD~~~~~~~~i~------~ 248 (376)
. ..+++|+..++.|+.+..|+..+.. ...+.+ +|++|.+++... ......+..||+.+++|+.++ +
T Consensus 264 ---~--~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~ 337 (656)
T 1k3i_A 264 ---A--KKTSLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPM 337 (656)
T ss_dssp ---T--TCEEEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGG
T ss_pred ---C--CceEEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccc
Confidence 1 3799999999999999888774443 456777 999999998422 113457899999999999862 3
Q ss_pred CCCCC------CCC-----------------------------------------------ceEEEE----ECCeEEEEE
Q 036621 249 PCILE------SSL-----------------------------------------------DVTLGI----YYQSLSLLI 271 (376)
Q Consensus 249 P~~~~------~~~-----------------------------------------------~~~l~~----~~G~L~~~~ 271 (376)
|.... ... ....++ .+|+|+++.
T Consensus 338 ~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~G 417 (656)
T 1k3i_A 338 LTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFG 417 (656)
T ss_dssp CCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEEC
T ss_pred ccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEe
Confidence 32210 000 001122 378898888
Q ss_pred EecC-------CCEEEEEEecC--CceeeEE--EEccCCceeEeEEEeeCCcEEEEecC------------CEEEEEECC
Q 036621 272 LDNV-------DHCFKIWVMRK--KNWIKQL--TVGPFIGIFQPLLFWKKGAFFVESNS------------SQLLLYEPG 328 (376)
Q Consensus 272 ~~~~-------~~~l~iW~l~~--~~W~~~~--~i~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~yd~~ 328 (376)
.... .....|++.+- ..|..+. .+ +......-..+..+++||+..+. ..+..||++
T Consensus 418 G~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m-p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 418 GSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp CBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred CCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC-CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC
Confidence 7321 11124444443 8899886 66 55554333344457888877541 348999999
Q ss_pred CCCEEEEE
Q 036621 329 TGELRDFE 336 (376)
Q Consensus 329 ~~~~~~v~ 336 (376)
+++|+.+.
T Consensus 497 t~~W~~~~ 504 (656)
T 1k3i_A 497 QDTFYKQN 504 (656)
T ss_dssp GTEEEECC
T ss_pred CCceeecC
Confidence 99999875
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.71 E-value=1.3e-05 Score=76.02 Aligned_cols=44 Identities=20% Similarity=0.426 Sum_probs=39.6
Q ss_pred CCCcHHHHHHHHccCCccccccccccchhhHhhcCC-hHHHHHHH
Q 036621 7 DDSPEDITIEILSRLPVKSLIRLRCVCKSWYALIKD-PNFISMHL 50 (376)
Q Consensus 7 ~~LP~Dll~~IL~rLp~~~l~r~r~VcK~W~~lis~-p~F~~~~~ 50 (376)
..||+|++.+||+.||+++|.+++.|||+|+.++.+ +..-+.+.
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 469999999999999999999999999999999998 77666554
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.63 E-value=2.8e-05 Score=73.34 Aligned_cols=285 Identities=16% Similarity=0.105 Sum_probs=138.4
Q ss_pred CCCcHH----HHHHHHccCCccccccccccchhhHhhcCChHHHHHHHhcCCC-----------Cce--EEEEeeeCCC-
Q 036621 7 DDSPED----ITIEILSRLPVKSLIRLRCVCKSWYALIKDPNFISMHLKNDVN-----------TRL--IVLYAKEDDT- 68 (376)
Q Consensus 7 ~~LP~D----ll~~IL~rLp~~~l~r~r~VcK~W~~lis~p~F~~~~~~~~~~-----------~~~--~~~~~~~~~~- 68 (376)
+.||+| |+.+||+.|++++|.++++|||+|+.++.++.+-+....+... ..| .++.......
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 91 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGN 91 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC--------
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCCC
Confidence 469999 9999999999999999999999999999988776654433210 000 0000000000
Q ss_pred -CCCCcceeeee-c----CCC-CCceecc--CC---CCCCCCccccccccceeceEEEecCCCeEEEEecCcccceecCC
Q 036621 69 -EEHSHPKEYFC-L----FPD-ETLEDLS--LQ---DLSTQEPVLGSFKGLYCGIVFIEGLNNRITLWNIATRESITLPK 136 (376)
Q Consensus 69 -~~~~~~~~~~~-~----~~~-~~~~~~~--~~---~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~v~NP~T~~~~~LP~ 136 (376)
....++...+. . ... .+|.... .. ....... ....+...+..++.....+.+.+||..+++....-.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 170 (435)
T 1p22_A 92 APPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSK-GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 170 (435)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCC-CEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC
T ss_pred CCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCC-cEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc
Confidence 00000000000 0 000 0000000 00 0000000 112223333444444467889999999887654321
Q ss_pred CccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEeccCCCccccCCcceeEeCc
Q 036621 137 YRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDG 216 (376)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G 216 (376)
.. ... ...+.+| ++ .+..+. .+ -.+.+|+..++.-...- ...... -.++.+++
T Consensus 171 ~h---~~~------v~~l~~~---~~--~l~sg~---~d-------g~i~vwd~~~~~~~~~~--~~h~~~-v~~l~~~~ 223 (435)
T 1p22_A 171 GH---TGS------VLCLQYD---ER--VIITGS---SD-------STVRVWDVNTGEMLNTL--IHHCEA-VLHLRFNN 223 (435)
T ss_dssp CC---SSC------EEEEECC---SS--EEEEEE---TT-------SCEEEEESSSCCEEEEE--CCCCSC-EEEEECCT
T ss_pred CC---CCc------EEEEEEC---CC--EEEEEc---CC-------CeEEEEECCCCcEEEEE--cCCCCc-EEEEEEcC
Confidence 11 111 3455553 22 222221 22 47888888776432111 110000 12334445
Q ss_pred eEEEEecccCCCCceEEEEEEcCccceeee--cCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceeeEEE
Q 036621 217 AFYWLLKLENDNDSYVILSFNMADEKFQEI--QGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLT 294 (376)
Q Consensus 217 ~lYwl~~~~~~~~~~~il~fD~~~~~~~~i--~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~ 294 (376)
.....+.. ...|..+|+.+.+-... .+..+.. ...-...+|+..++... +..+.+|.+... ..+..
T Consensus 224 ~~l~s~s~-----dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~l~s~~~--dg~i~vwd~~~~--~~~~~ 291 (435)
T 1p22_A 224 GMMVTCSK-----DRSIAVWDMASPTDITLRRVLVGHRA---AVNVVDFDDKYIVSASG--DRTIKVWNTSTC--EFVRT 291 (435)
T ss_dssp TEEEEEET-----TSCEEEEECSSSSCCEEEEEECCCSS---CEEEEEEETTEEEEEET--TSEEEEEETTTC--CEEEE
T ss_pred CEEEEeeC-----CCcEEEEeCCCCCCceeeeEecCCCC---cEEEEEeCCCEEEEEeC--CCeEEEEECCcC--cEEEE
Confidence 44444433 45788999877543211 1111111 23333347776666665 789999988763 23344
Q ss_pred EccCCceeEeEEEeeCCcEE-EEecCCEEEEEECCCCCEE
Q 036621 295 VGPFIGIFQPLLFWKKGAFF-VESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 295 i~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~yd~~~~~~~ 333 (376)
+..... .+.++.-++..+ ....++.+.+||.++++..
T Consensus 292 ~~~~~~--~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 292 LNGHKR--GIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EECCSS--CEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred EcCCCC--cEEEEEeCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 411111 222333345544 4455778999999987543
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.47 E-value=1.7e-06 Score=87.09 Aligned_cols=149 Identities=5% Similarity=-0.074 Sum_probs=104.6
Q ss_pred ceEEEEEcCCCceEecc-CC-----CccccCCcceeEe--CceEEEEecccCCC-CceEEEEEEcCccceeee-cCCCCC
Q 036621 183 SLVAVYTLRTNSWKNLK-PI-----DYTMRLSSERTYF--DGAFYWLLKLENDN-DSYVILSFNMADEKFQEI-QGPCIL 252 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~-~~-----p~~~~~~~~~v~~--~G~lYwl~~~~~~~-~~~~il~fD~~~~~~~~i-~~P~~~ 252 (376)
..+++|+..++.|+.++ ++ |..... ...+.+ +|.+|.+++..... ....+..||+.+++|+.+ ++|..+
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 57999999999999998 63 444444 668888 99999999865322 245689999999999998 666554
Q ss_pred CCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEc--cCCceeEe-EEEeeC-CcEEEEecC------
Q 036621 253 ESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVG--PFIGIFQP-LLFWKK-GAFFVESNS------ 319 (376)
Q Consensus 253 ~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~--~~~~~~~~-~~~~~~-~~l~~~~~~------ 319 (376)
. ....+.+ +|+|+++++..... .+|+++- ..|+.+...+ |....... ..+..+ +.||+..+.
T Consensus 491 ~---~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~ 565 (695)
T 2zwa_A 491 F---RHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT 565 (695)
T ss_dssp B---SCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC
T ss_pred c---cceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe
Confidence 4 3455664 99999999854333 6666655 9999987621 33332222 222333 567776542
Q ss_pred --CEEEEEECCCCC------EEEEEE
Q 036621 320 --SQLLLYEPGTGE------LRDFEL 337 (376)
Q Consensus 320 --~~~~~yd~~~~~------~~~v~~ 337 (376)
..+..||+++++ |+++..
T Consensus 566 ~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 566 VSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp BCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred eeCcEEEEEccCCccccceEEEEcCC
Confidence 359999999999 888865
No 23
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.07 E-value=6.8e-07 Score=78.18 Aligned_cols=51 Identities=25% Similarity=0.365 Sum_probs=47.0
Q ss_pred CCCCCcHHHHHHHHccCCccccccccccchhhHhhcCChHHHHHHHhcCCC
Q 036621 5 GNDDSPEDITIEILSRLPVKSLIRLRCVCKSWYALIKDPNFISMHLKNDVN 55 (376)
Q Consensus 5 ~~~~LP~Dll~~IL~rLp~~~l~r~r~VcK~W~~lis~p~F~~~~~~~~~~ 55 (376)
+++.||+|++..||+.|++++|.++.+|||+||.+++|+..-+.+..+..+
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 467899999999999999999999999999999999999999988877654
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.07 E-value=1.4e-05 Score=79.91 Aligned_cols=144 Identities=9% Similarity=0.064 Sum_probs=95.8
Q ss_pred EEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCC------CceEEEEEEcCccceeee-cCCCCCCCCC
Q 036621 186 AVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDN------DSYVILSFNMADEKFQEI-QGPCILESSL 256 (376)
Q Consensus 186 ~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~------~~~~il~fD~~~~~~~~i-~~P~~~~~~~ 256 (376)
+.|+..++.|+.+.++|.. . ...+++ +|.+|.+++..... ....+..||+.+++|+.+ .+|..... +
T Consensus 169 ~~~dp~~~~W~~~~~~P~~-~--~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~-~ 244 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDLPIV-P--AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM-F 244 (656)
T ss_dssp CCCCTTSCEEEEEEECSSC-C--SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC-S
T ss_pred ccCCCCCCeeeeeccCCCC-c--eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC-c
Confidence 3345567899988877761 1 224445 99999998753211 234789999999999887 44443322 1
Q ss_pred ceEEE-EECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecC-------CEEEEEECC
Q 036621 257 DVTLG-IYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS-------SQLLLYEPG 328 (376)
Q Consensus 257 ~~~l~-~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~yd~~ 328 (376)
....+ ..+|+|+++.... ...+.+|-.....|+++..+ +........++..+++||+..+. ..+..||++
T Consensus 245 ~~~~~~~~~g~lyv~GG~~-~~~v~~yd~~t~~W~~~~~~-~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGND-AKKTSLYDSSSDSWIPGPDM-QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTTSCEEEECSSS-TTCEEEEEGGGTEEEECCCC-SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCCCCEEEeCCCC-CCceEEecCcCCceeECCCC-CccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 22333 3589999999843 23455555545999998777 65554444444447888887651 359999999
Q ss_pred CCCEEEE
Q 036621 329 TGELRDF 335 (376)
Q Consensus 329 ~~~~~~v 335 (376)
+++|+.+
T Consensus 323 t~~W~~~ 329 (656)
T 1k3i_A 323 SKTWTSL 329 (656)
T ss_dssp TTEEEEE
T ss_pred CCcceeC
Confidence 9999997
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.48 E-value=3.1e-05 Score=70.34 Aligned_cols=42 Identities=31% Similarity=0.677 Sum_probs=38.1
Q ss_pred CCCCCCcHHHHHHHHccCCccccccccccchhhHhhcCChHH
Q 036621 4 LGNDDSPEDITIEILSRLPVKSLIRLRCVCKSWYALIKDPNF 45 (376)
Q Consensus 4 ~~~~~LP~Dll~~IL~rLp~~~l~r~r~VcK~W~~lis~p~F 45 (376)
..++.||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 457899999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.96 E-value=0.00019 Score=70.44 Aligned_cols=39 Identities=28% Similarity=0.414 Sum_probs=29.4
Q ss_pred CccCCCCCCcHHHHHHHHccCC-ccccccccccchhhHhh
Q 036621 1 MVLLGNDDSPEDITIEILSRLP-VKSLIRLRCVCKSWYAL 39 (376)
Q Consensus 1 ~~~~~~~~LP~Dll~~IL~rLp-~~~l~r~r~VcK~W~~l 39 (376)
|..-.++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4444578999999999999999 89999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.34 E-value=0.001 Score=65.23 Aligned_cols=34 Identities=15% Similarity=0.425 Sum_probs=31.7
Q ss_pred CCCCcHHHHHHHHccC-CccccccccccchhhHhh
Q 036621 6 NDDSPEDITIEILSRL-PVKSLIRLRCVCKSWYAL 39 (376)
Q Consensus 6 ~~~LP~Dll~~IL~rL-p~~~l~r~r~VcK~W~~l 39 (376)
...||||++.+||++| |.+++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 889999999999999987
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.73 E-value=1 Score=40.02 Aligned_cols=195 Identities=9% Similarity=-0.021 Sum_probs=104.5
Q ss_pred eceEEEecC-----CCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCccc
Q 036621 109 CGIVFIEGL-----NNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAF 182 (376)
Q Consensus 109 ~Gll~~~~~-----~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 182 (376)
+|++.+..+ ...+.++||.|++... ++........... .-++.++. +.-.+.. . .+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~----~~~i~~~~---~~lyv~~---~-~~------- 63 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDV----AQSMVIRD---GIGWIVV---N-NS------- 63 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSC----EEEEEEET---TEEEEEE---G-GG-------
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCcc----ceEEEEEC---CEEEEEE---c-CC-------
Confidence 577777664 6789999999998653 2110000000000 12344442 2222222 1 11
Q ss_pred ceEEEEEcCCCce-EeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCC-CCceE
Q 036621 183 SLVAVYTLRTNSW-KNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILES-SLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W-~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~-~~~~~ 259 (376)
..+.+++..++.- +.++....... -.+.-+|.+|..... ...|.++|+.+.+.. .++.+..... .....
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~p~~---i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTSPRY---IHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQ 135 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSSEEE---EEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCC
T ss_pred CEEEEEECcccEEEEEcCCCCCCcE---EEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcce
Confidence 4788888887654 22321111111 022257888887633 458999999987764 4565541100 01123
Q ss_pred EEEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecC-----------CEEEEEECC
Q 036621 260 LGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS-----------SQLLLYEPG 328 (376)
Q Consensus 260 l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~yd~~ 328 (376)
++..+|+|++.... ....+.++-++..+ .+.++ +......-+.+..+|++++.... ..++.+|++
T Consensus 136 i~~~~~~lyv~~~~-~~~~v~viD~~t~~--~~~~i-~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 136 MVQYGKYVYVNCWS-YQNRILKIDTETDK--VVDEL-TIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EEEETTEEEEEECT-TCCEEEEEETTTTE--EEEEE-ECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred EEEECCEEEEEcCC-CCCEEEEEECCCCe--EEEEE-EcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 44468888887641 14566666655433 33344 32221223455667888776543 579999999
Q ss_pred CCCEE
Q 036621 329 TGELR 333 (376)
Q Consensus 329 ~~~~~ 333 (376)
+++..
T Consensus 212 t~~v~ 216 (328)
T 3dsm_A 212 TFTVE 216 (328)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 98765
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.44 E-value=1.4 Score=39.63 Aligned_cols=188 Identities=9% Similarity=0.034 Sum_probs=101.6
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
+|+.......+.|||..+++....-.... .... ...+.+.+.++.+-+.. . .+ ..+.+++.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-h~~~------v~~~~~~~~~~~~l~s~--~---~d-------~~i~iwd~ 148 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMG-PGDA------ITGMKFNQFNTNQLFVS--S---IR-------GATTLRDF 148 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCS-TTCB------EEEEEEETTEEEEEEEE--E---TT-------TEEEEEET
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCC-cCCc------eeEEEeCCCCCCEEEEE--e---CC-------CEEEEEEC
Confidence 44444456788999999887665432211 1111 35666665433332222 1 22 47888888
Q ss_pred CCCceEeccCCCc---cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCe
Q 036621 191 RTNSWKNLKPIDY---TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQS 266 (376)
Q Consensus 191 ~t~~W~~~~~~p~---~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~ 266 (376)
.++..+....... ... .-...-+|.....+.. ...|..+|+..+....+...... -..+... +|+
T Consensus 149 ~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~h~~~----v~~~~~~~~~~ 217 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWYC--CVDVSVSRQMLATGDS-----TGRLLLLGLDGHEIFKEKLHKAK----VTHAEFNPRCD 217 (383)
T ss_dssp TSCEEEEEECCCCSSCCEE--EEEEETTTTEEEEEET-----TSEEEEEETTSCEEEEEECSSSC----EEEEEECSSCT
T ss_pred CCCceEEEeccCCCCCCeE--EEEECCCCCEEEEECC-----CCCEEEEECCCCEEEEeccCCCc----EEEEEECCCCC
Confidence 8766655542211 000 0012224554444433 45899999966555544422211 2223333 455
Q ss_pred -EEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEee-CCcEEEE-ecCCEEEEEECCCCC
Q 036621 267 -LSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWK-KGAFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 267 -L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~-~~~~~~~~yd~~~~~ 331 (376)
+.+.... +..+.||.+.. ..-..+..+ .......-+.+.. ++..++. ..++.+.+||+++.+
T Consensus 218 ~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 218 WLMATSSV--DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp TEEEEEET--TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CEEEEEeC--CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 5555555 78999999987 223444444 3333344455566 6765554 457889999998764
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.63 E-value=2.2 Score=37.77 Aligned_cols=139 Identities=7% Similarity=0.092 Sum_probs=76.6
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe--C--ceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCc
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF--D--GAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLD 257 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~--G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~ 257 (376)
..+.+|+..++.|.....+...-.. -..+.+ + |.+...+.. ...|..||+.+..- ..+.+..+... .
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~--v 150 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIIDAHAIG--V 150 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSC-EEEEEECCGGGCSEEEEEET-----TSEEEEEECCTTSCCCEEEEECCTTC--E
T ss_pred CEEEEEEcCCCceeEeeeecCCCcc-eEEEEeCCCCCCCEEEEecC-----CCcEEEEecCCCCceeeEEecCCCCc--e
Confidence 4788999998887666522210000 112222 2 444444433 45788888877632 22222111111 1
Q ss_pred eEEEEE--------------CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeC---CcEEEE-e
Q 036621 258 VTLGIY--------------YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKK---GAFFVE-S 317 (376)
Q Consensus 258 ~~l~~~--------------~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~l~~~-~ 317 (376)
..+... +|.+.++... +..+.||.+.. ..|.....+........-+.+..+ +.+++. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeC--CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 222222 4666666665 67899999976 667777777222222344555666 565554 4
Q ss_pred cCCEEEEEECCCCC
Q 036621 318 NSSQLLLYEPGTGE 331 (376)
Q Consensus 318 ~~~~~~~yd~~~~~ 331 (376)
.++.+.+||.+++.
T Consensus 229 ~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTSCEEEEEESSTT
T ss_pred CCCEEEEEeCCCCC
Confidence 46789999988763
No 31
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.43 E-value=2.1 Score=36.61 Aligned_cols=187 Identities=9% Similarity=-0.003 Sum_probs=97.4
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|.+.+.. ....++++|| +++...+..+.. ... ..++..|+.. ++... . . .. ..+.
T Consensus 108 ~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~--~~~------~~~i~~~~~g---~l~v~-~-~-~~-------~~i~ 165 (299)
T 2z2n_A 108 PNGDIWFTEMNGNRIGRITD-DGKIREYELPNK--GSY------PSFITLGSDN---ALWFT-E-N-QN-------NAIG 165 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEECSST--TCC------EEEEEECTTS---CEEEE-E-T-TT-------TEEE
T ss_pred CCCCEEEEecCCceEEEECC-CCCEEEecCCCC--CCC------CceEEEcCCC---CEEEE-e-C-CC-------CEEE
Confidence 366666554 4578999999 776655432211 111 3466666543 22222 1 1 11 3667
Q ss_pred EEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-
Q 036621 187 VYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY- 263 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~- 263 (376)
+|+. ++...... .+..... ..++.+ +|.+|+.... ...|..||. +.++..+..|..... ...+...
T Consensus 166 ~~~~-~g~~~~~~-~~~~~~~-~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~~--~~~i~~~~ 234 (299)
T 2z2n_A 166 RITE-SGDITEFK-IPTPASG-PVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKIPTPNAR--PHAITAGA 234 (299)
T ss_dssp EECT-TCCEEEEE-CSSTTCC-EEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCC--EEEEEECS
T ss_pred EEcC-CCcEEEee-CCCCCCc-ceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEECCCCCCC--ceeEEECC
Confidence 7777 66655432 1111111 113333 5787665432 458999999 777776666533221 2344443
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCC-ceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFI-GIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
+|.|++.... ...+.+|..+ ... ....+ +.. ....-+.+ .++.+++....+.+..||+++++++
T Consensus 235 ~g~l~v~~~~--~~~i~~~d~~-g~~-~~~~~-~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 235 GIDLWFTEWG--ANKIGRLTSN-NII-EEYPI-QIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp TTCEEEEETT--TTEEEEEETT-TEE-EEEEC-SSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred CCCEEEeccC--CceEEEECCC-Cce-EEEeC-CCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 6787776644 4566666552 221 11222 211 11233444 6778888766788999999987653
No 32
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.35 E-value=3.8 Score=41.07 Aligned_cols=192 Identities=5% Similarity=0.038 Sum_probs=98.4
Q ss_pred EEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcC
Q 036621 112 VFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLR 191 (376)
Q Consensus 112 l~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~ 191 (376)
|+.....+.+.|||..++....+..... .... ..++.+.+..+.-.++.. . .+ ..+.+|+..
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~------V~~l~~s~~~~~~~l~s~-s---~D-------g~I~vwd~~ 85 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTG-HEGP------VWRVDWAHPKFGTILASC-S---YD-------GKVLIWKEE 85 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECC-CSSC------EEEEEECCTTSCSEEEEE-E---TT-------SCEEEEEEE
T ss_pred EEEEECCCcEEEEecCCCCCccceeccC-CcCc------eEEEEecCCCCCCEEEEE-e---CC-------CeEEEEECC
Confidence 3333345677899877443332221111 1111 356666554322223332 1 22 478999999
Q ss_pred CCceEeccCCCccccCCcceeEe--C--ceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE---
Q 036621 192 TNSWKNLKPIDYTMRLSSERTYF--D--GAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY--- 263 (376)
Q Consensus 192 t~~W~~~~~~p~~~~~~~~~v~~--~--G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~--- 263 (376)
++.|.....+...-.. -.++.+ + |.+...+.. ...|..+|+.+..-. .+.+..+... ...+...
T Consensus 86 ~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~~l~sgs~-----dg~I~vwdl~~~~~~~~~~~~~~~~~--v~~l~~~p~~ 157 (753)
T 3jro_A 86 NGRWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIIDAHAIG--VNSASWAPAT 157 (753)
T ss_dssp TTEEEEEEEECCCSSC-EEEEEECCGGGCSEEEEEET-----TSEEEEEECCSSSCCCCEEEECCSSC--EEEEEECCCC
T ss_pred CCcccccccccCCCCC-eEEEEECCCCCCCEEEEEeC-----CCcEEEEEeecCCCcceeEeecCCCc--eEEEEecCcc
Confidence 8887666522210000 112222 2 444444433 457888888776321 1111111111 1122222
Q ss_pred -----------CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeC---CcEEEEe-cCCEEEEEE
Q 036621 264 -----------YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKK---GAFFVES-NSSQLLLYE 326 (376)
Q Consensus 264 -----------~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~l~~~~-~~~~~~~yd 326 (376)
+|.+.+++.. +..+.+|.+.. ..+.....+........-+.+..+ +.+++.. .++.+.+||
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~--dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp ---------CGGGCCEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccCCCCCEEEEEEC--CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 3566666665 67899999987 667777776322222344555555 6655544 467899999
Q ss_pred CCCCC
Q 036621 327 PGTGE 331 (376)
Q Consensus 327 ~~~~~ 331 (376)
++++.
T Consensus 236 ~~~~~ 240 (753)
T 3jro_A 236 QDNEQ 240 (753)
T ss_dssp ESSSS
T ss_pred CCCCC
Confidence 98863
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.02 E-value=2.5 Score=37.82 Aligned_cols=195 Identities=11% Similarity=0.049 Sum_probs=96.3
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
++.++.....+.+.|||..+++...........+... ...+.+.+.. ++ ++.. . .+ ..+.++
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~-----V~~v~~spdg-~~-l~sg-s---~d-------~~i~iw 154 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDI-----VSTVSVLSSG-TQ-AVSG-S---KD-------ICIKVW 154 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSC-----EEEEEECTTS-SE-EEEE-E---TT-------SCEEEE
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCC-----EEEEEECCCC-CE-EEEE-e---CC-------CeEEEE
Confidence 5666666667889999999988665433222112221 3456665532 32 2221 1 22 468888
Q ss_pred EcCCCceE-eccCCCccccCCcceeE--eCceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE-
Q 036621 189 TLRTNSWK-NLKPIDYTMRLSSERTY--FDGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY- 263 (376)
Q Consensus 189 ss~t~~W~-~~~~~p~~~~~~~~~v~--~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~- 263 (376)
+.+++.=. ........ -.++. -+|.-+.+... ....|..+|+.+.+-. .+..+..... ...+...
T Consensus 155 d~~~~~~~~~~~~h~~~----V~~~~~~~~~~~~l~s~s----~D~~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~p 224 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAAQ----VTCVAASPHKDSVFLSCS----EDNRILLWDTRCPKPASQIGCSAPGYL--PTSLAWHP 224 (344)
T ss_dssp ETTTTEEEEEECCCSSC----EEEEEECSSCTTEEEEEE----TTSCEEEEETTSSSCEEECC----CCC--EEEEEECS
T ss_pred ECCCCcEEEEEcCcCCc----eEEEEecCCCCCceeeec----cccccccccccccceeeeeecceeecc--ceeeeecC
Confidence 88765321 11111110 00111 13322222222 2346888999876543 2332222111 2223332
Q ss_pred -CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCC-cEEE-EecCCEEEEEECCCCCEEEE
Q 036621 264 -YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKG-AFFV-ESNSSQLLLYEPGTGELRDF 335 (376)
Q Consensus 264 -~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~l~~-~~~~~~~~~yd~~~~~~~~v 335 (376)
++++.+.... +..+.||-+... ..+.++.-......-+++..++ .++. ...++.+.+||.++++..++
T Consensus 225 ~~~~~l~sg~~--dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 225 QQSEVFVFGDE--NGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp SCTTEEEEEET--TSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CCCcceEEecc--CCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4556555555 788999987652 2233331122223345556565 4444 34577899999999876543
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.68 E-value=3.7 Score=36.76 Aligned_cols=188 Identities=11% Similarity=0.077 Sum_probs=98.4
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+..|++.. ....+.+||+.+++....-... .. ..++.+++.. ++-++.. . .+ ..+.+
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~----~~------~~~~~~s~dg-~~l~~~~-~---~~-------~~v~~ 142 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTG----KS------PLGLALSPDG-KKLYVTN-N---GD-------KTVSV 142 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECS----SS------EEEEEECTTS-SEEEEEE-T---TT-------TEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCC----CC------cceEEECCCC-CEEEEEe-C---CC-------CEEEE
Confidence 33444444 4578999999998865543221 11 3456665543 2222221 1 11 47888
Q ss_pred EEcCCCceEeccCCCccccCCcceeE--eCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTY--FDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY- 263 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~--~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~- 263 (376)
|+..++.....-.... . ...+. -+|...++... ....|..+|+.+.+.... ..... ...+...
T Consensus 143 ~d~~~~~~~~~~~~~~---~-~~~~~~~~dg~~l~~~~~----~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~ 209 (391)
T 1l0q_A 143 INTVTKAVINTVSVGR---S-PKGIAVTPDGTKVYVANF----DSMSISVIDTVTNSVIDTVKVEAA-----PSGIAVNP 209 (391)
T ss_dssp EETTTTEEEEEEECCS---S-EEEEEECTTSSEEEEEET----TTTEEEEEETTTTEEEEEEECSSE-----EEEEEECT
T ss_pred EECCCCcEEEEEecCC---C-cceEEECCCCCEEEEEeC----CCCEEEEEECCCCeEEEEEecCCC-----ccceEECC
Confidence 8887765433221111 0 11222 24544433433 245799999988765433 32111 1223333
Q ss_pred CCeEEEEEE-ecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEE-EEe-cCCEEEEEECCCCCEEE
Q 036621 264 YQSLSLLIL-DNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFF-VES-NSSQLLLYEPGTGELRD 334 (376)
Q Consensus 264 ~G~L~~~~~-~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~-~~~-~~~~~~~yd~~~~~~~~ 334 (376)
+|+..++.. ......+.+|-++.. ..+..+ +......-+.+..+++.+ +.. .++.+.+||+++++...
T Consensus 210 ~g~~l~~~~~~~~~~~v~~~d~~~~--~~~~~~-~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 210 EGTKAYVTNVDKYFNTVSMIDTGTN--KITARI-PVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp TSSEEEEEEECSSCCEEEEEETTTT--EEEEEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCcCCCcEEEEECCCC--eEEEEE-ecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 565444444 223788999988763 234455 332222335556667644 443 36789999999886543
No 35
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.01 E-value=4.5 Score=35.66 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=67.3
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecC-CCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecC-Cceee
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQG-PCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRK-KNWIK 291 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~-P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~-~~W~~ 291 (376)
+|.+|.....+ ....|..||+.+++.+.+.. +..... ...++.. +|+..++... ....+.+|.++. .....
T Consensus 50 dg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~--p~~~a~spdg~~l~~~~~-~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 50 KDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTP--PAYVAVDEARQLVYSANY-HKGTAEVMKIAADGALTL 123 (347)
T ss_dssp TCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCC--CSEEEEETTTTEEEEEET-TTTEEEEEEECTTSCEEE
T ss_pred CCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCC--CEEEEECCCCCEEEEEeC-CCCEEEEEEeCCCCCeee
Confidence 78877776531 24689999998777766522 222111 2344444 6764444431 268899999965 55555
Q ss_pred EEEEccCCc----------eeEeEEEeeCCcEEEEec-CCEEEEEECC-CCCEEEE
Q 036621 292 QLTVGPFIG----------IFQPLLFWKKGAFFVESN-SSQLLLYEPG-TGELRDF 335 (376)
Q Consensus 292 ~~~i~~~~~----------~~~~~~~~~~~~l~~~~~-~~~~~~yd~~-~~~~~~v 335 (376)
+..+ .... ...-+++..++++++... ++.+.+||++ ++++..+
T Consensus 124 ~~~~-~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 124 TDTV-QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEE-ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred ccee-ecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 5555 2211 022356667778555543 5679999998 6666644
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.59 E-value=5.8 Score=35.91 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=100.8
Q ss_pred eeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 108 YCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 108 ~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
.++.++.....+.+.+||..+++...+-.... ... ...+.+.+ ++++-++.- .+ ..+.+
T Consensus 102 s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~--~~~------v~~v~~s~-~~~~l~~~~-----~d-------g~i~i 160 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNADSGSVSALAETDE--STY------VASVKWSH-DGSFLSVGL-----GN-------GLVDI 160 (401)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECCT--TCC------EEEEEECT-TSSEEEEEE-----TT-------SCEEE
T ss_pred cCCCEEEEECCCeEEEeeCCCCcEeEeeecCC--CCC------EEEEEECC-CCCEEEEEC-----CC-------CeEEE
Confidence 34445455556899999999998766543321 111 35666666 333322221 22 47888
Q ss_pred EEcCCCceEe-ccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CC
Q 036621 188 YTLRTNSWKN-LKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 188 yss~t~~W~~-~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G 265 (376)
|+..++.-.. ....... -..+..+|.+...+.. ...|..+|+....-....+..+... -..+... +|
T Consensus 161 wd~~~~~~~~~~~~~~~~----v~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~ 229 (401)
T 4aez_A 161 YDVESQTKLRTMAGHQAR----VGCLSWNRHVLSSGSR-----SGAIHHHDVRIANHQIGTLQGHSSE--VCGLAWRSDG 229 (401)
T ss_dssp EETTTCCEEEEECCCSSC----EEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTS
T ss_pred EECcCCeEEEEecCCCCc----eEEEEECCCEEEEEcC-----CCCEEEEecccCcceeeEEcCCCCC--eeEEEEcCCC
Confidence 8887654322 1111111 2244456665554443 5689999998443222222222111 1223333 56
Q ss_pred eEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCC-cEEEEec---CCEEEEEECCCCCEE
Q 036621 266 SLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKG-AFFVESN---SSQLLLYEPGTGELR 333 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~l~~~~~---~~~~~~yd~~~~~~~ 333 (376)
++.+.... +..+.+|-+... ..+..+........-+.+..++ .++.... ++.+.+||.++++..
T Consensus 230 ~~l~s~~~--d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 230 LQLASGGN--DNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SEEEEEET--TSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CEEEEEeC--CCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 66666665 678999988762 2233331222223334445544 4665543 778999999887643
No 37
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.58 E-value=4.4 Score=34.45 Aligned_cols=113 Identities=11% Similarity=0.148 Sum_probs=74.7
Q ss_pred eEeCceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCcee
Q 036621 212 TYFDGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWI 290 (376)
Q Consensus 212 v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~ 290 (376)
.+.+|.||.-.+.. ....|..+|+.+.+- ..+++|.... ...+...+++|+++... .. .+|+.+-..-.
T Consensus 27 ~~~~~~LyestG~~---g~S~v~~vD~~tgkv~~~~~l~~~~f---geGi~~~~~~ly~ltw~--~~--~v~v~D~~tl~ 96 (243)
T 3mbr_X 27 FYLRGHLYESTGET---GRSSVRKVDLETGRILQRAEVPPPYF---GAGIVAWRDRLIQLTWR--NH--EGFVYDLATLT 96 (243)
T ss_dssp EEETTEEEEEECCT---TSCEEEEEETTTCCEEEEEECCTTCC---EEEEEEETTEEEEEESS--SS--EEEEEETTTTE
T ss_pred EEECCEEEEECCCC---CCceEEEEECCCCCEEEEEeCCCCcc---eeEEEEeCCEEEEEEee--CC--EEEEEECCcCc
Confidence 34456777655442 246899999998766 4457776542 35567778999998764 33 45666666677
Q ss_pred eEEEEccCCceeEeEEEeeCC-cEEEEecCCEEEEEECCCCCE-EEEEE
Q 036621 291 KQLTVGPFIGIFQPLLFWKKG-AFFVESNSSQLLLYEPGTGEL-RDFEL 337 (376)
Q Consensus 291 ~~~~i~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~yd~~~~~~-~~v~~ 337 (376)
++.+| +.... ..++..++ .+++..++.++..+|++|.+. +.+.+
T Consensus 97 ~~~ti-~~~~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 97 PRARF-RYPGE--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEE-ECSSC--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEE-eCCCC--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 77888 65542 23444444 577777778899999999754 44544
No 38
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.48 E-value=6.3 Score=36.14 Aligned_cols=135 Identities=11% Similarity=0.011 Sum_probs=64.7
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI 262 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~ 262 (376)
..+.+|+.+++.-... +.. ....-.++..+|.....+.. ...|..||+.+.+.... +..+.. ...-..
T Consensus 276 g~i~vwd~~~~~~~~~--~~~-~~~~v~~~~~~~~~l~~g~~-----dg~i~iwd~~~~~~~~~-~~~h~~---~v~~~~ 343 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRT--LNG-HKRGIACLQYRDRLVVSGSS-----DNTIRLWDIECGACLRV-LEGHEE---LVRCIR 343 (435)
T ss_dssp SEEEEEETTTCCEEEE--EEC-CSSCEEEEEEETTEEEEEET-----TSCEEEEETTTCCEEEE-ECCCSS---CEEEEE
T ss_pred CeEEEEECCcCcEEEE--EcC-CCCcEEEEEeCCCEEEEEeC-----CCeEEEEECCCCCEEEE-EeCCcC---cEEEEE
Confidence 4677777766432111 110 00112244446655554443 45789999987654222 111111 233334
Q ss_pred ECCeEEEEEEecCCCEEEEEEecC-C------ceeeEEEEccCCceeEeEEEeeCCcEEE-EecCCEEEEEECCCCCEE
Q 036621 263 YYQSLSLLILDNVDHCFKIWVMRK-K------NWIKQLTVGPFIGIFQPLLFWKKGAFFV-ESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 263 ~~G~L~~~~~~~~~~~l~iW~l~~-~------~W~~~~~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~yd~~~~~~~ 333 (376)
.+|...+.... +..+.||.+.. . ....+..+........-+.+ ++..++ ...++.+.+||+.++...
T Consensus 344 ~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 344 FDNKRIVSGAY--DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp CCSSEEEEEET--TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred ecCCEEEEEeC--CCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 47777666665 78899999866 1 22234444222211122222 455444 444788999999886543
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.24 E-value=4.9 Score=34.26 Aligned_cols=199 Identities=10% Similarity=0.106 Sum_probs=103.3
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|.+.+.. ....+.+||+..+....++.......... ...++.++...+. ++... ...+ ..+.+
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~----~p~~i~~~~~~g~--l~v~~--~~~~-------~~i~~ 104 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLL----YPNRVAVVRNSGD--IIVTE--RSPT-------HQIQI 104 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBS----SEEEEEEETTTTE--EEEEE--CGGG-------CEEEE
T ss_pred CCCEEEEECCCCEEEEECCCCcEEEEecccCCCccccc----CceEEEEEcCCCe--EEEEc--CCCC-------CEEEE
Confidence 45555553 45688999988655555553221111000 1346666433332 22221 1101 46777
Q ss_pred EEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-C
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-Y 264 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~ 264 (376)
|+.....-+.... .. ... ..++.+ +|.+|..... ...|..||...+....+..+.... ....++.. +
T Consensus 105 ~d~~g~~~~~~~~-~~-~~~-~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~--~p~~i~~~~~ 174 (286)
T 1q7f_A 105 YNQYGQFVRKFGA-TI-LQH-PRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLE--FPNGVVVNDK 174 (286)
T ss_dssp ECTTSCEEEEECT-TT-CSC-EEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCS--SEEEEEECSS
T ss_pred ECCCCcEEEEecC-cc-CCC-ceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccC--CcEEEEECCC
Confidence 7744333232221 11 001 113333 6887765433 458999998776666554332221 12344444 5
Q ss_pred CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCce--eEeEEEeeCCcEEEEec-CC-EEEEEECCCCCEEEEEE
Q 036621 265 QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGI--FQPLLFWKKGAFFVESN-SS-QLLLYEPGTGELRDFEL 337 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~-~~-~~~~yd~~~~~~~~v~~ 337 (376)
|+|++.... ...+.+|..+.. .+..+...... ..-+++..+|.+++... +. .+..||++++..+.+..
T Consensus 175 g~l~v~~~~--~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 175 QEIFISDNR--AHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp SEEEEEEGG--GTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred CCEEEEECC--CCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 887776654 577888876442 23334111111 23355566778887765 33 89999988777766654
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.09 E-value=6.3 Score=35.21 Aligned_cols=184 Identities=13% Similarity=0.106 Sum_probs=95.1
Q ss_pred eEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEE
Q 036621 111 IVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYT 189 (376)
Q Consensus 111 ll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (376)
.+++.. ....+.+||..+++....-... .. ..++.+.+.. ++ ++.... .+ ..+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~----~~------~~~~~~s~dg-~~-l~~~~~---~d-------~~i~v~d 60 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG----SN------PMGAVISPDG-TK-VYVANA---HS-------NDVSIID 60 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS----SS------EEEEEECTTS-SE-EEEEEG---GG-------TEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC----CC------cceEEECCCC-CE-EEEECC---CC-------CeEEEEE
Confidence 344443 4678999999998766432111 11 2455555533 22 222211 11 4788888
Q ss_pred cCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-CC
Q 036621 190 LRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 190 s~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~G 265 (376)
..++.-...-.... . -.++.+ +|...+.+.. ....|..+|+.+.+.... ..... ...+... +|
T Consensus 61 ~~~~~~~~~~~~~~---~-v~~~~~spdg~~l~~~~~----~~~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg 127 (391)
T 1l0q_A 61 TATNNVIATVPAGS---S-PQGVAVSPDGKQVYVTNM----ASSTLSVIDTTSNTVAGTVKTGKS-----PLGLALSPDG 127 (391)
T ss_dssp TTTTEEEEEEECSS---S-EEEEEECTTSSEEEEEET----TTTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTS
T ss_pred CCCCeEEEEEECCC---C-ccceEECCCCCEEEEEEC----CCCEEEEEECCCCeEEEEEeCCCC-----cceEEECCCC
Confidence 87765432211111 0 112222 4553333332 245899999988765433 32211 2233333 56
Q ss_pred eEE-EEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEE-EEe-cCCEEEEEECCCCCEEE
Q 036621 266 SLS-LLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFF-VES-NSSQLLLYEPGTGELRD 334 (376)
Q Consensus 266 ~L~-~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~-~~~-~~~~~~~yd~~~~~~~~ 334 (376)
+.. +.... ...+.+|.+...+... .+ ........+.+..+++.+ +.. .++.+.+||+++++...
T Consensus 128 ~~l~~~~~~--~~~v~~~d~~~~~~~~--~~-~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 128 KKLYVTNNG--DKTVSVINTVTKAVIN--TV-SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp SEEEEEETT--TTEEEEEETTTTEEEE--EE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CEEEEEeCC--CCEEEEEECCCCcEEE--EE-ecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 644 44434 6789999887644333 33 222222445556667644 443 35789999999886543
No 41
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.02 E-value=6.2 Score=34.94 Aligned_cols=183 Identities=10% Similarity=0.130 Sum_probs=91.5
Q ss_pred cCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCce
Q 036621 116 GLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSW 195 (376)
Q Consensus 116 ~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W 195 (376)
.....+.|||..++.+............. ...+.+.|. +++-+.. . .+ ..+.+++..++.+
T Consensus 35 ~~D~~i~iw~~~~~~~~~~~~~~~~h~~~------v~~~~~sp~-g~~l~s~--s---~D-------~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 35 GGDRRIRIWGTEGDSWICKSVLSEGHQRT------VRKVAWSPC-GNYLASA--S---FD-------ATTCIWKKNQDDF 95 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECSSCSSC------EEEEEECTT-SSEEEEE--E---TT-------SCEEEEEECCC-E
T ss_pred cCCCeEEEEEcCCCcceeeeeeccccCCc------EEEEEECCC-CCEEEEE--E---CC-------CcEEEEEccCCCe
Confidence 35677899998877654221111111111 346666653 2332222 1 22 4677888777665
Q ss_pred EeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccc-eeee-cCCCCCCCCCceEEEEE-CCeEEEE
Q 036621 196 KNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEK-FQEI-QGPCILESSLDVTLGIY-YQSLSLL 270 (376)
Q Consensus 196 ~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~-~~~i-~~P~~~~~~~~~~l~~~-~G~L~~~ 270 (376)
+.+..+...-.. -.++.+ +|.+...+.. ...|..+|+.++. ...+ .+..+... -..+.-. +|++.+.
T Consensus 96 ~~~~~~~~h~~~-v~~v~~sp~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~h~~~--v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 96 ECVTTLEGHENE-VKSVAWAPSGNLLATCSR-----DKSVWVWEVDEEDEYECVSVLNSHTQD--VKHVVWHPSQELLAS 167 (345)
T ss_dssp EEEEEECCCSSC-EEEEEECTTSSEEEEEET-----TSCEEEEEECTTSCEEEEEEECCCCSC--EEEEEECSSSSCEEE
T ss_pred EEEEEccCCCCC-ceEEEEeCCCCEEEEEEC-----CCeEEEEECCCCCCeEEEEEecCcCCC--eEEEEECCCCCEEEE
Confidence 543322110000 011111 4544444333 3467888886643 2222 22222111 1222222 5666555
Q ss_pred EEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEEC
Q 036621 271 ILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEP 327 (376)
Q Consensus 271 ~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~ 327 (376)
... +..+.+|.+....|.....+........-+.+..++..++. ..++.+.+||.
T Consensus 168 ~s~--d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 168 ASY--DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EeC--CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 555 67899999988888877777323333444566666765554 34667777774
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.93 E-value=1.9 Score=39.85 Aligned_cols=189 Identities=13% Similarity=0.130 Sum_probs=92.3
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
+|......+.+.|||..+++...+-.... +... ..++.+.|.++.+- +.. . .+ .++.+++.
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~g--H~~~-----V~~l~f~p~~~~~l-~s~-s---~D-------~~v~iwd~ 194 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIG--AGGS-----ITGLKFNPLNTNQF-YAS-S---ME-------GTTRLQDF 194 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCS--SSCC-----CCEEEECSSCTTEE-EEE-C---SS-------SCEEEEET
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccC--CCCC-----EEEEEEeCCCCCEE-EEE-e---CC-------CEEEEeec
Confidence 44444456789999998887543322111 1111 34666766555542 222 1 22 46788888
Q ss_pred CCCceEeccCCCc--cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCe-
Q 036621 191 RTNSWKNLKPIDY--TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQS- 266 (376)
Q Consensus 191 ~t~~W~~~~~~p~--~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~- 266 (376)
+++.-+....... ..-. .-.+.-+|.+...+.. ...|..+|+..+....+.. +... -..+... +|.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~-----dg~i~~wd~~~~~~~~~~~--h~~~--v~~v~~~p~~~~ 264 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFC-SLDVSASSRMVVTGDN-----VGNVILLNMDGKELWNLRM--HKKK--VTHVALNPCCDW 264 (435)
T ss_dssp TSCEEEEEECCSSCSCCCC-CEEEETTTTEEEEECS-----SSBEEEEESSSCBCCCSBC--CSSC--EEEEEECTTCSS
T ss_pred cCCceeEEeccCCCCccEE-EEEECCCCCEEEEEeC-----CCcEeeeccCcceeEEEec--ccce--EEeeeecCCCce
Confidence 7766554431111 1111 1122235555554433 4578889987654333221 1111 1222222 444
Q ss_pred EEEEEEecCCCEEEEEEecCCceee--EEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCC
Q 036621 267 LSLLILDNVDHCFKIWVMRKKNWIK--QLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 267 L~~~~~~~~~~~l~iW~l~~~~W~~--~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~ 331 (376)
+.+.... +..+.||-+....-.. .... .......-+++..++..++. ..++.+.+||.++..
T Consensus 265 ~~~s~s~--d~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 265 FLATASV--DQTVKIWDLRQVRGKASFLYSL-PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EEEEEET--TSBCCEEETTTCCSSSCCSBCC-BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred EEEEecC--cceeeEEecccccccceEEEee-eccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 4444444 6789999876611111 0001 11111222334456665544 446779999988764
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.82 E-value=7.3 Score=35.37 Aligned_cols=192 Identities=10% Similarity=0.106 Sum_probs=99.7
Q ss_pred ceeceEEEec-CCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 107 LYCGIVFIEG-LNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 107 s~~Gll~~~~-~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
+.+|.+++.. ....+.+||+.+++... ++... .. ..++.+++..+ + ++... . .+ ..
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----~~------~~~~~~~~~~~-~-l~~~~--~-~~-------~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG----KW------SKILLYDPIRD-L-VYCSN--W-IS-------ED 235 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS----SS------EEEEEEETTTT-E-EEEEE--T-TT-------TE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC----CC------eeEEEEcCCCC-E-EEEEe--c-CC-------Cc
Confidence 3466665554 46789999998876543 32111 11 34666665433 2 22221 1 11 47
Q ss_pred EEEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCC---CceEEEEEEcCccceeee-cCCCCCCCCCce
Q 036621 185 VAVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDN---DSYVILSFNMADEKFQEI-QGPCILESSLDV 258 (376)
Q Consensus 185 ~~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~---~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~ 258 (376)
+.+|+.+++.....-..... ..++.+ +|...+.+...... ....|..||+.+.+.... ..+.. ..
T Consensus 236 i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----~~ 306 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKIGL----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN-----KR 306 (433)
T ss_dssp EEEEETTTTEEEEECCCCSE----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC-----EE
T ss_pred EEEEECCCCcEEEEecCCCC----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC-----cc
Confidence 88899887654322211110 112222 56555555432110 145889999987654333 21111 12
Q ss_pred EEEEE-CCe-EEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ec---------------CC
Q 036621 259 TLGIY-YQS-LSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SN---------------SS 320 (376)
Q Consensus 259 ~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~---------------~~ 320 (376)
.+... +|+ |++.... +..+.+|.++. ...+..+ +......-+++..+++.++. .. ++
T Consensus 307 ~~~~~~~g~~l~~~~~~--~~~v~v~d~~~--~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMC--CSKIEVYDLKE--KKVQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp EEEECSSTTEEEEEETT--TTEEEEEETTT--TEEEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred eEEECCCCCEEEEEecC--CCEEEEEECCC--CcEEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccce
Confidence 23322 454 5554444 67899998875 2334445 33332344566667765443 33 24
Q ss_pred EEEEEECCCCCEEE
Q 036621 321 QLLLYEPGTGELRD 334 (376)
Q Consensus 321 ~~~~yd~~~~~~~~ 334 (376)
.+.+||+++++...
T Consensus 382 ~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 382 KVYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEEETTTTEEEE
T ss_pred EEEEEECCCCcEEE
Confidence 89999999876543
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.70 E-value=2.4 Score=37.98 Aligned_cols=194 Identities=10% Similarity=0.002 Sum_probs=88.0
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
+|.++.....+.+.|||..+++............... ...+.+.|. +.+- +.. . .+ ..+.++
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~-----V~~v~~spd-g~~l-~sg-s---~d-------g~v~iw 166 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDI-----VKTLSVFSD-GTQA-VSG-G---KD-------FSVKVW 166 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSC-----EEEEEECSS-SSEE-EEE-E---TT-------SCEEEE
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCC-----EEEEEECCC-CCEE-EEE-e---CC-------CeEEEE
Confidence 5556556666789999999987665443322222221 345666553 2322 222 1 22 467888
Q ss_pred EcCCCceEec-cCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-
Q 036621 189 TLRTNSWKNL-KPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY- 263 (376)
Q Consensus 189 ss~t~~W~~~-~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~- 263 (376)
+..++.-... ...... -.++.+ +|.-+.+... ....|..+|+.+.+.... ....... ....+.-.
T Consensus 167 d~~~~~~~~~~~~h~~~----v~~v~~s~~~~~~~~s~~----~dg~v~~wd~~~~~~~~~~~~~~~~~--~v~~v~~sp 236 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSE----VNCVAACPGKDTIFLSCG----EDGRILLWDTRKPKPATRIDFCASDT--IPTSVTWHP 236 (357)
T ss_dssp ETTTTEEEEEECCCSSC----EEEEEECTTCSSCEEEEE----TTSCEEECCTTSSSCBCBCCCTTCCS--CEEEEEECT
T ss_pred ECCCCcEEEEEcCCCCC----EEEEEEccCCCceeeeec----cCCceEEEECCCCceeeeeeeccccc--cccchhhhh
Confidence 8776543221 111000 011111 2321222222 234678888877553222 2222211 12223332
Q ss_pred -CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCC-cEEE-EecCCEEEEEECCCCCEEE
Q 036621 264 -YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKG-AFFV-ESNSSQLLLYEPGTGELRD 334 (376)
Q Consensus 264 -~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~l~~-~~~~~~~~~yd~~~~~~~~ 334 (376)
++.+.++... +..+.||-+... ..+..+.....-..-+++..++ .++. ...++.+.+||.++++...
T Consensus 237 ~~~~~la~g~~--d~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 237 EKDDTFACGDE--TGNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp TSTTEEEEEES--SSCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred cccceEEEeec--ccceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 3455555555 678999988762 1223331111113334555555 4444 3457789999999886543
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.45 E-value=7.8 Score=34.95 Aligned_cols=198 Identities=8% Similarity=-0.028 Sum_probs=100.7
Q ss_pred ec-eEEEecCCCeEEEEecCcccceecC-CCc--cCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 109 CG-IVFIEGLNNRITLWNIATRESITLP-KYR--AIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 109 ~G-ll~~~~~~~~~~v~NP~T~~~~~LP-~~~--~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
+| +|+.......+.|||..+++...-. .+. ...+... ...+.+.+....+ ++.. . .+ ..
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~~-l~s~-~---~d-------g~ 155 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR-----VGIVAWHPTAQNV-LLSA-G---CD-------NV 155 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC-----EEEEEECSSBTTE-EEEE-E---TT-------SC
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe-----EEEEEECcCCCCE-EEEE-c---CC-------CE
Confidence 44 4444446788999999887542210 000 0011111 3456666554332 2222 1 22 47
Q ss_pred EEEEEcCCCceEecc---CCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceee-e-cCCCCCCCCCc
Q 036621 185 VAVYTLRTNSWKNLK---PIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQE-I-QGPCILESSLD 257 (376)
Q Consensus 185 ~~vyss~t~~W~~~~---~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i-~~P~~~~~~~~ 257 (376)
+.+|+.+++.....- ..... -.++.+ +|.....+.. ...|..+|+.+.+... + ....... .
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~---~ 223 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDT----IYSVDWSRDGALICTSCR-----DKRVRVIEPRKGTVVAEKDRPHEGTR---P 223 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSC----EEEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEEEECSSCSSS---C
T ss_pred EEEEECCCCCccEEEecCCCCCc----eEEEEECCCCCEEEEEec-----CCcEEEEeCCCCceeeeeccCCCCCc---c
Confidence 888888876543221 11110 112222 4554444433 4589999998765432 2 2222111 1
Q ss_pred eEEEEE-CCeEEEEEEe-cCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeCCcEEE-Ee-cCCEEEEEECCCCC-
Q 036621 258 VTLGIY-YQSLSLLILD-NVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKKGAFFV-ES-NSSQLLLYEPGTGE- 331 (376)
Q Consensus 258 ~~l~~~-~G~L~~~~~~-~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~yd~~~~~- 331 (376)
..+.-. +|++.++... ..+..+.+|.+.. ..=.....+ .......-+.+..++..++ .. .++.+.+||.++++
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL-DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC-CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec-cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 223332 6776666531 2378999999877 321223333 2222233455566777654 44 36789999999887
Q ss_pred -EEEEE
Q 036621 332 -LRDFE 336 (376)
Q Consensus 332 -~~~v~ 336 (376)
.+.+.
T Consensus 303 ~~~~l~ 308 (402)
T 2aq5_A 303 FLHYLS 308 (402)
T ss_dssp CEEEEE
T ss_pred ceEeec
Confidence 66554
No 46
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=90.93 E-value=7.2 Score=33.61 Aligned_cols=111 Identities=8% Similarity=0.048 Sum_probs=70.4
Q ss_pred ceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceeeEEE
Q 036621 216 GAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLT 294 (376)
Q Consensus 216 G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~ 294 (376)
|.+|.-.+.. ....|..+|+.+.+- ..+++|.... ...++..+++|++.... ... +++.+-..-..+.+
T Consensus 32 g~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~f---geGi~~~g~~lyv~t~~--~~~--v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 32 DTLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYF---GEGLTLLNEKLYQVVWL--KNI--GFIYDRRTLSNIKN 101 (266)
T ss_dssp TEEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCC---EEEEEEETTEEEEEETT--CSE--EEEEETTTTEEEEE
T ss_pred CeEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcc---eEEEEEeCCEEEEEEec--CCE--EEEEECCCCcEEEE
Confidence 6787766421 256899999988765 3446655322 34456667888888764 344 55565566677778
Q ss_pred EccCCceeEeEEEeeCC-cEEEEecCCEEEEEECCCCC-EEEEEEe
Q 036621 295 VGPFIGIFQPLLFWKKG-AFFVESNSSQLLLYEPGTGE-LRDFELE 338 (376)
Q Consensus 295 i~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~yd~~~~~-~~~v~~~ 338 (376)
| +.. .....++..++ .+|+..++..+...|++|.+ .+.+...
T Consensus 102 i-~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 102 F-THQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp E-ECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred E-ECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 8 554 11224444455 46766667789999999965 4455543
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.70 E-value=8.3 Score=33.93 Aligned_cols=190 Identities=15% Similarity=0.102 Sum_probs=92.5
Q ss_pred EEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcC
Q 036621 112 VFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLR 191 (376)
Q Consensus 112 l~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~ 191 (376)
|+.......+.+||..++++..+-.... .... ...+.+.+. +++-+.. . .+ ..+.+|+..
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~------v~~~~~~~~-~~~l~~~--~---~d-------g~i~vwd~~ 82 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQ------VTGVDWAPD-SNRIVTC--G---TD-------RNAYVWTLK 82 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEEC-CSSC------EEEEEEETT-TTEEEEE--E---TT-------SCEEEEEEE
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCc------ccEEEEeCC-CCEEEEE--c---CC-------CeEEEEECC
Confidence 3333356788999998885322221111 1111 356666663 3332222 1 22 478888888
Q ss_pred CCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccc-e---eeecCCCCCCCCCceEEEEE-C
Q 036621 192 TNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEK-F---QEIQGPCILESSLDVTLGIY-Y 264 (376)
Q Consensus 192 t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~-~---~~i~~P~~~~~~~~~~l~~~-~ 264 (376)
++.+.....+...-.. -..+.+ +|.....+.. ...|..+|+.++. + ..+..+.. . ....+... +
T Consensus 83 ~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~-----d~~v~i~d~~~~~~~~~~~~~~~~~~-~--~i~~~~~~~~ 153 (372)
T 1k8k_C 83 GRTWKPTLVILRINRA-ARCVRWAPNEKKFAVGSG-----SRVISICYFEQENDWWVCKHIKKPIR-S--TVLSLDWHPN 153 (372)
T ss_dssp TTEEEEEEECCCCSSC-EEEEEECTTSSEEEEEET-----TSSEEEEEEETTTTEEEEEEECTTCC-S--CEEEEEECTT
T ss_pred CCeeeeeEEeecCCCc-eeEEEECCCCCEEEEEeC-----CCEEEEEEecCCCcceeeeeeecccC-C--CeeEEEEcCC
Confidence 8876554311110000 001111 4544444433 3456677776554 2 22222211 1 12233333 5
Q ss_pred CeEEEEEEecCCCEEEEEEecC---------C-------ceeeEEEEccCCceeEeEEEeeCCcEEE-EecCCEEEEEEC
Q 036621 265 QSLSLLILDNVDHCFKIWVMRK---------K-------NWIKQLTVGPFIGIFQPLLFWKKGAFFV-ESNSSQLLLYEP 327 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~---------~-------~W~~~~~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~yd~ 327 (376)
|++.++... +..+.+|.+.. . .-..+..+........-+.+..++..++ ...++.+.+||.
T Consensus 154 ~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 154 SVLLAAGSC--DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp SSEEEEEET--TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred CCEEEEEcC--CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 666665555 67899999642 1 1223333311111233345555666544 455778999999
Q ss_pred CCCCE
Q 036621 328 GTGEL 332 (376)
Q Consensus 328 ~~~~~ 332 (376)
++++.
T Consensus 232 ~~~~~ 236 (372)
T 1k8k_C 232 DKKMA 236 (372)
T ss_dssp GGTTE
T ss_pred CCCce
Confidence 87764
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=89.98 E-value=8.8 Score=33.08 Aligned_cols=195 Identities=11% Similarity=0.095 Sum_probs=98.3
Q ss_pred eeceEEEecCCCeEEEEecCcccceec-CCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEGLNNRITLWNIATRESITL-PKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~~~~~~~v~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|-+++..+.+.+.+||..+++.... ........... ...+.+.+.. ++-++. . .+ ..+.
T Consensus 61 ~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~-~~l~~~--~---~d-------~~i~ 122 (337)
T 1gxr_A 61 NPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNY-----IRSCKLLPDG-CTLIVG--G---EA-------STLS 122 (337)
T ss_dssp SSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSB-----EEEEEECTTS-SEEEEE--E---SS-------SEEE
T ss_pred cCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCc-----EEEEEEcCCC-CEEEEE--c---CC-------CcEE
Confidence 355554444467899999987653321 11110011111 3466666532 322222 1 22 4788
Q ss_pred EEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE
Q 036621 187 VYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY 263 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~ 263 (376)
+|+..++.......+...... -..+.+ +|.....+.. ...|..+|+.+.+... +.. +... ...+...
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~-----dg~v~~~d~~~~~~~~~~~~--~~~~--i~~~~~~ 192 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPA-CYALAISPDSKVCFSCCS-----DGNIAVWDLHNQTLVRQFQG--HTDG--ASCIDIS 192 (337)
T ss_dssp EEECCCC--EEEEEEECSSSC-EEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECC--CSSC--EEEEEEC
T ss_pred EEECCCCCcceeeecccCCCc-eEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCceeeeeec--ccCc--eEEEEEC
Confidence 999888765433211110000 001111 4544444433 3478889988765432 222 1111 2233333
Q ss_pred -CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEEEE
Q 036621 264 -YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELRDF 335 (376)
Q Consensus 264 -~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~~v 335 (376)
+|+..++... +..+.+|.++... .+..+ .......-+.+..+++.++. ..++.+..||.++++...+
T Consensus 193 ~~~~~l~~~~~--dg~i~~~d~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 193 NDGTKLWTGGL--DNTVRSWDLREGR--QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp TTSSEEEEEET--TSEEEEEETTTTE--EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred CCCCEEEEEec--CCcEEEEECCCCc--eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 6666666555 7889999887632 22333 22222334555566765544 4467899999998876544
No 49
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.69 E-value=9.1 Score=32.85 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=72.2
Q ss_pred EeCceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceee
Q 036621 213 YFDGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIK 291 (376)
Q Consensus 213 ~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~ 291 (376)
+.+|.||.-.+.. ....|..+|+.+.+- ..+++|... +...+...+++|+++... .. .+|+.+-+.-.+
T Consensus 50 ~~~~~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~~~~---FgeGit~~g~~ly~ltw~--~~--~v~v~D~~t~~~ 119 (262)
T 3nol_A 50 YRNGYFYESTGLN---GRSSIRKVDIESGKTLQQIELGKRY---FGEGISDWKDKIVGLTWK--NG--LGFVWNIRNLRQ 119 (262)
T ss_dssp EETTEEEEEEEET---TEEEEEEECTTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESS--SS--EEEEEETTTCCE
T ss_pred EECCEEEEECCCC---CCceEEEEECCCCcEEEEEecCCcc---ceeEEEEeCCEEEEEEee--CC--EEEEEECccCcE
Confidence 3467777766542 256899999998765 445776533 234567778999998764 33 456666666667
Q ss_pred EEEEccCCceeEeEEEeeCCc-EEEEecCCEEEEEECCCCC-EEEEEE
Q 036621 292 QLTVGPFIGIFQPLLFWKKGA-FFVESNSSQLLLYEPGTGE-LRDFEL 337 (376)
Q Consensus 292 ~~~i~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~yd~~~~~-~~~v~~ 337 (376)
+.+| +.... ..++..+++ +++..++..+..+|++|.+ .+.+..
T Consensus 120 ~~ti-~~~~e--G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 120 VRSF-NYDGE--GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEE-ECSSC--CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEE-ECCCC--ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 7788 65442 233334454 5665556789999999865 344444
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.68 E-value=10 Score=33.30 Aligned_cols=146 Identities=13% Similarity=0.091 Sum_probs=79.5
Q ss_pred ceEEEEEcC-CCceEeccC--CCc-cccCCcceeEeCce-EEEEecccCCCCceEEEEEEcC--ccceeee----cCCCC
Q 036621 183 SLVAVYTLR-TNSWKNLKP--IDY-TMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMA--DEKFQEI----QGPCI 251 (376)
Q Consensus 183 ~~~~vyss~-t~~W~~~~~--~p~-~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~--~~~~~~i----~~P~~ 251 (376)
..+.+|+.. ++....... .+. .... .-.+.-+|. +|..... ...|..||+. +.++..+ ..|..
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~-~~~~spdg~~l~v~~~~-----~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 235 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPR-HLVFSPDGQYAFLAGEL-----SSQIASLKYDTQTGAFTQLGIVKTIPAD 235 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEE-EEEECTTSSEEEEEETT-----TTEEEEEEEETTTTEEEEEEEEESSCTT
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCc-eEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCceEEeeeeeecCCC
Confidence 478888887 565554331 111 0011 112223676 5554433 3355556554 4555433 23332
Q ss_pred CCCCC-ceEEEEE-CCe-EEEEEEecCCCEEEEEEecC-CceeeEEEEccC-CceeEeEEEeeCCcE-EEEec-CCEEEE
Q 036621 252 LESSL-DVTLGIY-YQS-LSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPF-IGIFQPLLFWKKGAF-FVESN-SSQLLL 324 (376)
Q Consensus 252 ~~~~~-~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~-~~~~~~~~~~~~~~l-~~~~~-~~~~~~ 324 (376)
..... ...++.. +|+ |++.... ...+.+|.++. ..+..+..+ +. .....-+++..+++. ++... +..+.+
T Consensus 236 ~~~~~~~~~i~~spdG~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 312 (347)
T 3hfq_A 236 YTAHNGAAAIRLSHDGHFLYVSNRG--YNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQNTDNATL 312 (347)
T ss_dssp CCSCCEEEEEEECTTSCEEEEEEET--TTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCCcceeEEECCCCCEEEEEeCC--CCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEcCCCcEEE
Confidence 21111 2233333 676 5555444 68899999986 567777777 43 222344667778874 44443 356666
Q ss_pred E--ECCCCCEEEEEE
Q 036621 325 Y--EPGTGELRDFEL 337 (376)
Q Consensus 325 y--d~~~~~~~~v~~ 337 (376)
| |.++++++.+.-
T Consensus 313 ~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 313 YARDLTSGKLSLLQK 327 (347)
T ss_dssp EEECTTTCCEEEEEE
T ss_pred EEEeCCCCeEEeccc
Confidence 6 888999998864
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.60 E-value=11 Score=33.73 Aligned_cols=195 Identities=8% Similarity=0.014 Sum_probs=94.4
Q ss_pred eEEEecCCCeEEEEecCccc------ceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 111 IVFIEGLNNRITLWNIATRE------SITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
+|+.......+.+||..+++ .............. ...+.+.+..+.+ ++.. . .+ ..
T Consensus 128 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~~-l~~~-~---~d-------g~ 189 (416)
T 2pm9_A 128 VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE------VISLAWNQSLAHV-FASA-G---SS-------NF 189 (416)
T ss_dssp BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC------CCEEEECSSCTTE-EEEE-S---SS-------SC
T ss_pred EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC------eeEEEeCCCCCcE-EEEE-c---CC-------CC
Confidence 44444456789999998886 22211111111111 3456665543333 2222 1 22 46
Q ss_pred EEEEEcCCCceEeccCCCc-c--ccCCcceeEe--Cc-eEEEEecccCCCCceEEEEEEcCccceeeecCC-CCCCCCCc
Q 036621 185 VAVYTLRTNSWKNLKPIDY-T--MRLSSERTYF--DG-AFYWLLKLENDNDSYVILSFNMADEKFQEIQGP-CILESSLD 257 (376)
Q Consensus 185 ~~vyss~t~~W~~~~~~p~-~--~~~~~~~v~~--~G-~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P-~~~~~~~~ 257 (376)
+.+|+.+++.-...-.... . ....-..+.+ +| .+...+..+. ....|..||+.+..-....+. .+.. ..
T Consensus 190 v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~~~~i~~~d~~~~~~~~~~~~~~~~~--~v 265 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD--NDPSILIWDLRNANTPLQTLNQGHQK--GI 265 (416)
T ss_dssp EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS--SSCCCCEEETTSTTSCSBCCCSCCSS--CE
T ss_pred EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC--CCceEEEEeCCCCCCCcEEeecCccC--ce
Confidence 8888887764322211110 0 0000112222 23 3333333210 112788899887532222222 1111 12
Q ss_pred eEEEEE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCC-cEEEEe-cCCEEEEEECCCCC
Q 036621 258 VTLGIY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKG-AFFVES-NSSQLLLYEPGTGE 331 (376)
Q Consensus 258 ~~l~~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~yd~~~~~ 331 (376)
..+.-. +|++.+.... +..+.+|.++.. ..+..+........-+.+..++ .+++.. .++.+.+||+++.+
T Consensus 266 ~~~~~s~~~~~~l~s~~~--dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGR--DNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEEECSSCSSCEEEEES--SSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred eEEEeCCCCCCeEEEEeC--CCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 233333 5666666666 788999987663 3344442222223335556666 565554 46789999998765
No 52
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.79 E-value=11 Score=32.58 Aligned_cols=148 Identities=9% Similarity=0.106 Sum_probs=78.5
Q ss_pred ceEEEEEcCC-CceEecc--CCCccccCCcceeEe--Cce-EEEEecccCCCCceEEEEEEcCc--ccee---ee-cCCC
Q 036621 183 SLVAVYTLRT-NSWKNLK--PIDYTMRLSSERTYF--DGA-FYWLLKLENDNDSYVILSFNMAD--EKFQ---EI-QGPC 250 (376)
Q Consensus 183 ~~~~vyss~t-~~W~~~~--~~p~~~~~~~~~v~~--~G~-lYwl~~~~~~~~~~~il~fD~~~--~~~~---~i-~~P~ 250 (376)
..+.+|+..+ +...... ............+.+ +|. +|..... ...|..||+.. .++. .+ .+|.
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCc
Confidence 4788888876 6665322 110000000112222 565 4444422 45788888843 4443 22 3444
Q ss_pred CCCCCC-ceEEEEE-CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEec--CCEEEE
Q 036621 251 ILESSL-DVTLGIY-YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN--SSQLLL 324 (376)
Q Consensus 251 ~~~~~~-~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~ 324 (376)
...... ...+... +|+..++.. .....+.+|.++. ..+..+..+ +......-+++..+++.++... ++.+.+
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~-~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACD-RTASLITVFSVSEDGSVLSKEGFQ-PTETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTTSCCEEEEEEE-ECSSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred cccccCCccceEECCCCCEEEEEe-cCCCEEEEEEEcCCCCceEEeeee-cCCCccceEEECCCCCEEEEecCCCCeEEE
Confidence 322111 2233333 565333333 2268999999984 567777777 4433244466677777544443 466767
Q ss_pred E--ECCCCCEEEEEE
Q 036621 325 Y--EPGTGELRDFEL 337 (376)
Q Consensus 325 y--d~~~~~~~~v~~ 337 (376)
| |+++++++.+..
T Consensus 304 ~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 304 YEIVGEQGLLHEKGR 318 (343)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEcCCCceeeEccc
Confidence 6 888888877653
No 53
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=88.71 E-value=12 Score=32.90 Aligned_cols=187 Identities=10% Similarity=0.012 Sum_probs=98.5
Q ss_pred eceEEEec-CCCeEEEEecCcccce-ecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESI-TLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
++.+.+.. ....+.++|+.|++.+ .+|.. .. ..++.+++. . ++..... + + ..+.
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-----~~------p~~i~~~~~--g-~lyv~~~-~--~-------~~v~ 108 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGF-----TS------PRYIHFLSD--E-KAYVTQI-W--D-------YRIF 108 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECC-----SS------EEEEEEEET--T-EEEEEEB-S--C-------SEEE
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCC-----CC------CcEEEEeCC--C-eEEEEEC-C--C-------CeEE
Confidence 45554443 4678999999998874 45422 11 235555433 2 4444321 1 1 4788
Q ss_pred EEEcCCCceE-eccCCCc---cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEE
Q 036621 187 VYTLRTNSWK-NLKPIDY---TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLG 261 (376)
Q Consensus 187 vyss~t~~W~-~~~~~p~---~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~ 261 (376)
+++..++.-. .++ ... .......-+.-+|.+|..... ....|.++|+.+.+.. .++...... .+.
T Consensus 109 ~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~g~~p~-----~i~ 178 (328)
T 3dsm_A 109 IINPKTYEITGYIE-CPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTIGIQPT-----SLV 178 (328)
T ss_dssp EEETTTTEEEEEEE-CTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEECSSCBC-----CCE
T ss_pred EEECCCCeEEEEEE-cCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEcCCCcc-----ceE
Confidence 8888876532 222 111 001112233356777776531 1458999999987653 344432221 122
Q ss_pred EE-CCeEEEEEEecC--------CCEEEEEEecCCceeeEEEEccCC--ceeEeEEEeeCCcEEEEecCCEEEEEECCCC
Q 036621 262 IY-YQSLSLLILDNV--------DHCFKIWVMRKKNWIKQLTVGPFI--GIFQPLLFWKKGAFFVESNSSQLLLYEPGTG 330 (376)
Q Consensus 262 ~~-~G~L~~~~~~~~--------~~~l~iW~l~~~~W~~~~~i~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~ 330 (376)
.. +|+++++..... ...+.++-.+..+ .+..+ ... ....-+++..+++.++..+. .++.+|++++
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~~~-~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~ 254 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEKQF-KFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEAD 254 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEEEE-ECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCS
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--EEEEE-ecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCC
Confidence 22 688877766321 1345544443333 33344 322 12344555655665555544 7999999988
Q ss_pred CEE
Q 036621 331 ELR 333 (376)
Q Consensus 331 ~~~ 333 (376)
++.
T Consensus 255 ~~~ 257 (328)
T 3dsm_A 255 RVP 257 (328)
T ss_dssp SCC
T ss_pred cee
Confidence 753
No 54
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=88.08 E-value=11 Score=31.78 Aligned_cols=195 Identities=12% Similarity=0.089 Sum_probs=98.6
Q ss_pred cceeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 106 GLYCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 106 ~s~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
+..+|.|.+.. ...++.++++.++....+-... ... ..++.+|+..+. +... . .. . ..
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---~~~------p~~ia~d~~~~~--lyv~-d---~~----~--~~ 102 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD---LGS------PEGIALDHLGRT--IFWT-D---SQ----L--DR 102 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---CCC------EEEEEEETTTTE--EEEE-E---TT----T--TE
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC---CCC------ccEEEEEecCCe--EEEE-E---CC----C--CE
Confidence 33466666655 4568888988776543322111 011 357777765443 2222 1 11 1 46
Q ss_pred EEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 185 VAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 185 ~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
+.+++.....-+.+... .... ..++.+ +|.+||..... ....|..++++......+.. .... ....++
T Consensus 103 I~~~~~~g~~~~~~~~~--~~~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~-~~~~--~P~gia 173 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDT--GLVN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQ-DNLG--LPNGLT 173 (267)
T ss_dssp EEEEETTSCSCEEEECS--SCSS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEEC-TTCS--CEEEEE
T ss_pred EEEEEcCCCCEEEEEEC--CCCC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEE-CCCC--CCcEEE
Confidence 77777764332222111 1111 224444 68999987431 13588899987655444421 1111 133444
Q ss_pred EE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEee-CCcEEEEec-CCEEEEEECCCCC-EEEEE
Q 036621 262 IY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWK-KGAFFVESN-SSQLLLYEPGTGE-LRDFE 336 (376)
Q Consensus 262 ~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~yd~~~~~-~~~v~ 336 (376)
.. ++.|++.... ...+.+..++.. .....+ + ....|.++.. ++.+++... ...+..+|+++++ .+.+.
T Consensus 174 ~d~~~~~lyv~d~~--~~~I~~~~~~g~--~~~~~~-~--~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 174 FDAFSSQLCWVDAG--THRAECLNPAQP--GRRKVL-E--GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTEE--EEEEEE-E--CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCCEEEEEECC--CCEEEEEecCCC--ceEEEe-c--CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 44 4678877764 455555444331 111222 1 1233444433 445666554 4689999999765 44444
Q ss_pred E
Q 036621 337 L 337 (376)
Q Consensus 337 ~ 337 (376)
.
T Consensus 247 ~ 247 (267)
T 1npe_A 247 P 247 (267)
T ss_dssp C
T ss_pred c
Confidence 3
No 55
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.08 E-value=15 Score=33.33 Aligned_cols=200 Identities=9% Similarity=0.060 Sum_probs=102.3
Q ss_pred cccc-ceeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcc
Q 036621 103 SFKG-LYCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCA 181 (376)
Q Consensus 103 ~~~~-s~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 181 (376)
.+++ |.+++|.+.. .+.++|||..|++...+-..... ... ...+.+.+. +.|-+++ . .+
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~--~~~-----V~sv~fspd-g~~lasg--s---~D------ 168 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP--GEY-----ISSVAWIKE-GNYLAVG--T---SS------ 168 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST--TCC-----EEEEEECTT-SSEEEEE--E---TT------
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC--CCc-----EEEEEECCC-CCEEEEE--E---CC------
Confidence 3444 4466665544 57999999999987765332211 111 346666653 3443332 2 22
Q ss_pred cceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 182 FSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
..+.+++..++.-... +...-.. -.++..+|.+-..+.. ...+..+|..........+..+... ...+.
T Consensus 169 -g~v~iWd~~~~~~~~~--~~~h~~~-v~~~s~~~~~l~sgs~-----d~~i~~~d~~~~~~~~~~~~~h~~~--~~~~~ 237 (420)
T 4gga_A 169 -AEVQLWDVQQQKRLRN--MTSHSAR-VGSLSWNSYILSSGSR-----SGHIHHHDVRVAEHHVATLSGHSQE--VCGLR 237 (420)
T ss_dssp -SCEEEEETTTTEEEEE--ECCCSSC-EEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECCSSC--EEEEE
T ss_pred -CeEEEEEcCCCcEEEE--EeCCCCc-eEEEeeCCCEEEEEeC-----CCceeEeeecccceeeEEecccccc--eeeee
Confidence 4788888877542111 1110011 2244555655444433 4577778877655443333222221 12222
Q ss_pred EE-CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEee-CCcEEEEe---cCCEEEEEECCCCCEEE
Q 036621 262 IY-YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWK-KGAFFVES---NSSQLLLYEPGTGELRD 334 (376)
Q Consensus 262 ~~-~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~---~~~~~~~yd~~~~~~~~ 334 (376)
.. +|+..+.... +..+.||.... ..+..+............+++.. ++.++... .++.+.+||..+++...
T Consensus 238 ~~~~g~~l~s~~~--D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 238 WAPDGRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp ECTTSSEEEEEET--TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred ecCCCCeeeeeec--cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 22 5666555555 67899998876 33333333312222223333333 34455443 25779999999886544
Q ss_pred E
Q 036621 335 F 335 (376)
Q Consensus 335 v 335 (376)
.
T Consensus 316 ~ 316 (420)
T 4gga_A 316 A 316 (420)
T ss_dssp E
T ss_pred e
Confidence 3
No 56
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=88.08 E-value=12 Score=32.21 Aligned_cols=196 Identities=10% Similarity=0.074 Sum_probs=101.7
Q ss_pred eceEEEe-cCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIE-GLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~-~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|.|.+. ....+++.+||.+++...+..+. . ..++..++..+ -++.. . ..+.+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~------~~~i~~~~dG~--l~v~~-----~--------~~l~~ 77 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----P------VSSVALRQSGG--YVATI-----G--------TKFCA 77 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS-----C------EEEEEEBTTSS--EEEEE-----T--------TEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----c------eEEEEECCCCC--EEEEE-----C--------CeEEE
Confidence 4444444 45678999999998765543221 1 34666776543 22221 1 47888
Q ss_pred EEcCCCceEeccCCCc--cccCCcceeEe--CceEEEEecccCC------CCceEEEEEEcCccceeeecCCCCCCCCCc
Q 036621 188 YTLRTNSWKNLKPIDY--TMRLSSERTYF--DGAFYWLLKLEND------NDSYVILSFNMADEKFQEIQGPCILESSLD 257 (376)
Q Consensus 188 yss~t~~W~~~~~~p~--~~~~~~~~v~~--~G~lYwl~~~~~~------~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 257 (376)
|+..++.++.+...+. .... ...+.+ +|.+|+-...... .....|..+|.... ...+. .... ..
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~-~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~--~p 151 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNR-FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD--IS 151 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEE-EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES--BE
T ss_pred EECCCCcEEEEEecCCCCCCCC-CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc--cc
Confidence 9988888876653221 1111 112333 6886664422110 12457888887643 22221 0011 11
Q ss_pred eEEEEE-CCe-EEEEEEecCCCEEEEEEec-C-CceeeE---EEEccCCceeEeEEEeeCCcEEEEec-CCEEEEEECCC
Q 036621 258 VTLGIY-YQS-LSLLILDNVDHCFKIWVMR-K-KNWIKQ---LTVGPFIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGT 329 (376)
Q Consensus 258 ~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~-~-~~W~~~---~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~ 329 (376)
..++.. +|+ |+++... ...+.+|.++ + ...... ..+........-+++..+|.+++... +..+..||+++
T Consensus 152 ngi~~spdg~~lyv~~~~--~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSL--SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEECTTSCEEEEEEGG--GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred cceEEcCCCCEEEEecCC--CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 233433 565 5555554 5667777764 2 333221 22211111223355566788877654 56799999996
Q ss_pred CC-EEEEEEe
Q 036621 330 GE-LRDFELE 338 (376)
Q Consensus 330 ~~-~~~v~~~ 338 (376)
++ ...+...
T Consensus 230 G~~~~~i~~p 239 (297)
T 3g4e_A 230 GKRLQTVKLP 239 (297)
T ss_dssp CCEEEEEECS
T ss_pred ceEEEEEECC
Confidence 65 4555543
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.22 E-value=7.1 Score=34.39 Aligned_cols=108 Identities=8% Similarity=0.028 Sum_probs=63.7
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeE
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQ 292 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~ 292 (376)
+|.+...+.. ...|..||+.++++..+ .++.+... -..+... +|++.+.... +..+.+|.++..++...
T Consensus 19 ~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 19 DRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEHNGQ--VTGVDWAPDSNRIVTCGT--DRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp TSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECCSSC--EEEEEEETTTTEEEEEET--TSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecCCCCc--ccEEEEeCCCCEEEEEcC--CCeEEEEECCCCeeeee
Confidence 4554444432 45788899888865444 33322221 2233333 6776666655 67899999988777666
Q ss_pred EEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCC
Q 036621 293 LTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~ 331 (376)
..+........-+.+..++..++. ..++.+.+||.+++.
T Consensus 90 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 90 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 654223222344555556665444 446778888888765
No 58
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=87.05 E-value=14 Score=31.80 Aligned_cols=108 Identities=10% Similarity=0.021 Sum_probs=68.0
Q ss_pred eCceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceeeE
Q 036621 214 FDGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQ 292 (376)
Q Consensus 214 ~~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~ 292 (376)
.+|.||.-.+. ...|..+|+.+.+- ..+ +|... +...+...+++|+++... .. .+|+.+-+.-.++
T Consensus 63 ~~~~Ly~stG~-----~g~v~~iD~~Tgkv~~~~-l~~~~---FgeGit~~g~~Ly~ltw~--~~--~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 63 HQGHFFESTGH-----QGTLRQLSLESAQPVWME-RLGNI---FAEGLASDGERLYQLTWT--EG--LLFTWSGMPPQRE 129 (268)
T ss_dssp ETTEEEEEETT-----TTEEEECCSSCSSCSEEE-ECTTC---CEEEEEECSSCEEEEESS--SC--EEEEEETTTTEEE
T ss_pred ECCEEEEEcCC-----CCEEEEEECCCCcEEeEE-CCCCc---ceeEEEEeCCEEEEEEcc--CC--EEEEEECCcCcEE
Confidence 35666666554 33599999998765 334 55432 234466678889888664 33 4566666667777
Q ss_pred EEEccCCceeEeEEEeeCCc-EEEEecCCEEEEEECCCCCE-EEEEE
Q 036621 293 LTVGPFIGIFQPLLFWKKGA-FFVESNSSQLLLYEPGTGEL-RDFEL 337 (376)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~yd~~~~~~-~~v~~ 337 (376)
.+| +.... ..++..+++ +++..++..+..+|++|.+. +.+..
T Consensus 130 ~ti-~~~~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 130 RTT-RYSGE--GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEE-ECSSC--CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEE-eCCCc--eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 788 65432 233334454 56666577899999999653 44544
No 59
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.84 E-value=14 Score=31.57 Aligned_cols=197 Identities=8% Similarity=-0.067 Sum_probs=92.3
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecC---------CCC
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDE---------KRD 177 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~---------~~~ 177 (376)
.+|.+.+.. +...+.++||.+++...+........... ...+.+|+.. .+ ......+.. ...
T Consensus 78 ~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-----~~~i~~d~~G-~l--~vtd~~~g~~~~~~~~~~~~~ 149 (296)
T 3e5z_A 78 KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNS-----PNDVCLAPDG-SL--WFSDPTYGIDKPEEGYGGEME 149 (296)
T ss_dssp TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCC-----CCCEEECTTS-CE--EEEECSHHHHCGGGSSCCCCC
T ss_pred CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCC-----CCCEEECCCC-CE--EEECCcccccccccccccccc
Confidence 466665554 45789999999998776643221111100 1245555532 22 111000000 000
Q ss_pred CCcccceEEEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcC-ccce-eee-cCCCCC
Q 036621 178 SSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMA-DEKF-QEI-QGPCIL 252 (376)
Q Consensus 178 ~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~-~~~~-~~i-~~P~~~ 252 (376)
... ..+..|+.. +.-+.+..- ... ..++.+ +|.+++ ... ....|..||+. +.+. ... .+....
T Consensus 150 ~~~--~~l~~~~~~-g~~~~~~~~---~~~-~~gi~~s~dg~~lv-~~~----~~~~i~~~~~~~~g~~~~~~~~~~~~~ 217 (296)
T 3e5z_A 150 LPG--RWVFRLAPD-GTLSAPIRD---RVK-PNGLAFLPSGNLLV-SDT----GDNATHRYCLNARGETEYQGVHFTVEP 217 (296)
T ss_dssp SSS--CEEEEECTT-SCEEEEECC---CSS-EEEEEECTTSCEEE-EET----TTTEEEEEEECSSSCEEEEEEEECCSS
T ss_pred CCC--cEEEEECCC-CCEEEeecC---CCC-CccEEECCCCCEEE-EeC----CCCeEEEEEECCCCcCcCCCeEeeCCC
Confidence 001 244555544 333332210 111 113333 577764 433 24589999986 4444 111 111111
Q ss_pred CCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEE-eeCCcEEEEecCCEEEEEECCCC
Q 036621 253 ESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLF-WKKGAFFVESNSSQLLLYEPGTG 330 (376)
Q Consensus 253 ~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~yd~~~~ 330 (376)
. ....++.. +|+|.+.. ...+.+|..+. .-...... +.. ..-+++ ..+++.++......++.++++++
T Consensus 218 ~--~p~~i~~d~~G~l~v~~----~~~v~~~~~~g-~~~~~~~~-~~~--~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~ 287 (296)
T 3e5z_A 218 G--KTDGLRVDAGGLIWASA----GDGVHVLTPDG-DELGRVLT-PQT--TSNLCFGGPEGRTLYMTVSTEFWSIETNVR 287 (296)
T ss_dssp S--CCCSEEEBTTSCEEEEE----TTEEEEECTTS-CEEEEEEC-SSC--CCEEEEESTTSCEEEEEETTEEEEEECSCC
T ss_pred C--CCCeEEECCCCCEEEEc----CCeEEEECCCC-CEEEEEEC-CCC--ceeEEEECCCCCEEEEEcCCeEEEEEcccc
Confidence 1 11223333 78887776 35566665542 22222222 222 222334 34555555556678999999999
Q ss_pred CEEE
Q 036621 331 ELRD 334 (376)
Q Consensus 331 ~~~~ 334 (376)
++++
T Consensus 288 ~~~~ 291 (296)
T 3e5z_A 288 GLEH 291 (296)
T ss_dssp BCCC
T ss_pred cccc
Confidence 8764
No 60
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.74 E-value=17 Score=32.40 Aligned_cols=189 Identities=11% Similarity=0.045 Sum_probs=94.6
Q ss_pred ccceeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 105 KGLYCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 105 ~~s~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
....+|.|.+......++.+|+.|++.+.--......... ... + +. +|+.. . .+ -.
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~-------p~~--~---~~-~v~v~-~---~~-------g~ 154 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSR-------PVV--S---DG-LVLIH-T---SN-------GQ 154 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSC-------CEE--E---TT-EEEEE-C---TT-------SE
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcC-------CEE--E---CC-EEEEE-c---CC-------Ce
Confidence 3446788887777789999999998854211111110011 011 1 11 22221 1 11 36
Q ss_pred EEEEEcCCC--ceEeccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccc--eeee-cCCCCCCC----
Q 036621 185 VAVYTLRTN--SWKNLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEK--FQEI-QGPCILES---- 254 (376)
Q Consensus 185 ~~vyss~t~--~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~--~~~i-~~P~~~~~---- 254 (376)
+..|+..++ .|+....-+. ........+..+|.+|.-.. ...+.++|..+.+ |+.- ..|.....
T Consensus 155 l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~ 228 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRL 228 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT------TTEEEEEETTTCCEEEEEECCC----------
T ss_pred EEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCcccccc
Confidence 777887665 4876543222 11111346667888777432 4589999987654 3332 22321100
Q ss_pred -CCceEEEEECCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCC
Q 036621 255 -SLDVTLGIYYQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGE 331 (376)
Q Consensus 255 -~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~ 331 (376)
.........+|.+++... ...+..+..+. ..|... ......+ +..++.+++...++.++++|+++++
T Consensus 229 ~~~~~~p~~~~~~v~~~~~---~g~l~~~d~~tG~~~w~~~-----~~~~~~~--~~~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 229 SDVDTTPVVVNGVVFALAY---NGNLTALDLRSGQIMWKRE-----LGSVNDF--IVDGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp -CCCCCCEEETTEEEEECT---TSCEEEEETTTCCEEEEEC-----CCCEEEE--EEETTEEEEEETTCCEEEEETTTCC
T ss_pred cccCCCcEEECCEEEEEec---CcEEEEEECCCCcEEeecc-----CCCCCCc--eEECCEEEEEcCCCeEEEEECCCCc
Confidence 001112234666665543 23344444433 345432 1111111 1245667777777889999999987
Q ss_pred EE
Q 036621 332 LR 333 (376)
Q Consensus 332 ~~ 333 (376)
..
T Consensus 299 ~~ 300 (376)
T 3q7m_A 299 TL 300 (376)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 61
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=86.59 E-value=7.6 Score=33.86 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=62.2
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEec--CCCEEEEEEecCCceee
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDN--VDHCFKIWVMRKKNWIK 291 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~--~~~~l~iW~l~~~~W~~ 291 (376)
+|.+||.... ...|..||+.+.++..+..+... ....++.. +|+|.+..... ....+.+|..+...-..
T Consensus 55 ~g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 55 QGQLFLLDVF-----EGNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TSCEEEEETT-----TCEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 6888887654 45899999998887765321111 12344443 68887776531 11345444433322211
Q ss_pred EEEEccCCceeEeEEEeeCCcEEEEecC-------CEEEEEECCCCCEEEE
Q 036621 292 QLTVGPFIGIFQPLLFWKKGAFFVESNS-------SQLLLYEPGTGELRDF 335 (376)
Q Consensus 292 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~yd~~~~~~~~v 335 (376)
...-........-+.+..++.+++.... ..++.+|+++++.+.+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 1110011111233455667788776542 5799999998777665
No 62
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.42 E-value=17 Score=32.11 Aligned_cols=192 Identities=14% Similarity=0.113 Sum_probs=85.9
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|-+++.. ....+.|||..++.+..+-..... ... ...+.+.+.. ++ ++.. . .+ ..+.+
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h-~~~------v~~~~~s~~~-~~-l~s~-s---~d-------~~v~v 81 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSDH-DKI------VTCVDWAPKS-NR-IVTC-S---QD-------RNAYV 81 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCCC-SSC------EEEEEECTTT-CC-EEEE-E---TT-------SSEEE
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEecC-Cce------EEEEEEeCCC-CE-EEEE-e---CC-------CeEEE
Confidence 34443333 456789999988754433322221 111 3466666543 22 2222 1 22 46888
Q ss_pred EEcCCCc-eEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccc----eeeecCCCCCCCCCceEE
Q 036621 188 YTLRTNS-WKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEK----FQEIQGPCILESSLDVTL 260 (376)
Q Consensus 188 yss~t~~-W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~----~~~i~~P~~~~~~~~~~l 260 (376)
|+..++. |.....+...-.. -..+.+ +|.....+.. ...|..+|+.+.+ ...+..|.. . .-..+
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~h~-~--~v~~~ 152 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRA-ATFVRWSPNEDKFAVGSG-----ARVISVCYFEQENDWWVSKHLKRPLR-S--TILSL 152 (377)
T ss_dssp C------CCCCEEECCCCSSC-EEEEECCTTSSCCEEEES-----SSCEEECCC-----CCCCEEECSSCC-S--CEEEE
T ss_pred EEcCCCCceeeeeEecccCCc-eEEEEECCCCCEEEEEec-----CCeEEEEEECCcccceeeeEeecccC-C--CeEEE
Confidence 8887766 5443311110000 001111 3443333332 3467888887765 233332211 1 12233
Q ss_pred EEE-CCeEEEEEEecCCCEEEEEEecC---------Ccee-------eEEEEccCCceeEeEEEeeCCcEE-EEecCCEE
Q 036621 261 GIY-YQSLSLLILDNVDHCFKIWVMRK---------KNWI-------KQLTVGPFIGIFQPLLFWKKGAFF-VESNSSQL 322 (376)
Q Consensus 261 ~~~-~G~L~~~~~~~~~~~l~iW~l~~---------~~W~-------~~~~i~~~~~~~~~~~~~~~~~l~-~~~~~~~~ 322 (376)
.-. +|++.+.... +..+.+|.+.. ..|. .+..+ .......-+++..++.++ ....++.+
T Consensus 153 ~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 153 DWHPNNVLLAAGCA--DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EECTTSSEEEEEES--SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEE
T ss_pred EEcCCCCEEEEEeC--CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcE
Confidence 333 5666666655 67899999853 1221 22222 111113334555666644 44557789
Q ss_pred EEEECCCCCE
Q 036621 323 LLYEPGTGEL 332 (376)
Q Consensus 323 ~~yd~~~~~~ 332 (376)
.+||.++++.
T Consensus 230 ~iwd~~~~~~ 239 (377)
T 3dwl_C 230 TIAYPSAPEQ 239 (377)
T ss_dssp C-CEECSTTS
T ss_pred EEEECCCCCC
Confidence 9999988754
No 63
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=85.26 E-value=16 Score=33.24 Aligned_cols=111 Identities=10% Similarity=0.043 Sum_probs=69.2
Q ss_pred eCceEEEEecccCCCCceEEEEEEcCccceeee-cC---------CCCCCCCCceEEEEE--CCeEEEEEEec-----CC
Q 036621 214 FDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QG---------PCILESSLDVTLGIY--YQSLSLLILDN-----VD 276 (376)
Q Consensus 214 ~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~---------P~~~~~~~~~~l~~~--~G~L~~~~~~~-----~~ 276 (376)
-+|.++|.... ..+.++|+.++.-..+ +. +...... ...++.. +++|++..... ..
T Consensus 236 ~dG~~~~vs~~------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g-~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 236 KAGRLVWPTYT------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG-WQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp TTTEEEEEBTT------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS-SSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred CCCcEEEEeCC------CEEEEEECCCCcceeecceeccccccccccccCCC-cceeeECCCCCeEEEEeccccccccCC
Confidence 37889997753 4799999987754332 11 0000011 1123333 46677776521 12
Q ss_pred CEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCc-EEEE-ec-CCEEEEEECCCCCE
Q 036621 277 HCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGA-FFVE-SN-SSQLLLYEPGTGEL 332 (376)
Q Consensus 277 ~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~-~~-~~~~~~yd~~~~~~ 332 (376)
..=+||+++-..+..+.+| +...-..-+.+..+++ .++. .. ++.+.+||.++++.
T Consensus 309 ~~~~V~viD~~t~kv~~~i-~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp CEEEEEEEETTTCCEEEEE-EEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCeEEEEE-ECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 3568999998999999999 6654334467777775 5444 33 67899999998864
No 64
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=85.05 E-value=16 Score=30.51 Aligned_cols=183 Identities=10% Similarity=0.126 Sum_probs=96.6
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
+|.+.+......++++|+.++....++.... .. ..++.+|+.. . +... . . .. ..+.+|
T Consensus 77 ~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---~~------p~~i~~~~~g-~--l~v~-~-~-~~-------~~i~~~ 134 (270)
T 1rwi_B 77 AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---NY------PEGLAVDTQG-A--VYVA-D-R-GN-------NRVVKL 134 (270)
T ss_dssp TCCEEEEETTTEEEEECTTCSCCEECCCCSC---SS------EEEEEECTTC-C--EEEE-E-G-GG-------TEEEEE
T ss_pred CCCEEEEcCCCEEEEEeCCCceEeeeecCCc---CC------CcceEECCCC-C--EEEE-E-C-CC-------CEEEEE
Confidence 5666555546789999998877665543221 11 3577777643 2 2222 1 1 11 356667
Q ss_pred EcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CC
Q 036621 189 TLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 189 ss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G 265 (376)
+.++........ ..... ..++.+ +|.+|+.... ...|..||..+.......... . .....++.. +|
T Consensus 135 ~~~~~~~~~~~~--~~~~~-p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-~--~~p~~i~~d~~g 203 (270)
T 1rwi_B 135 AAGSKTQTVLPF--TGLND-PDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFTD-I--TAPWGIAVDEAG 203 (270)
T ss_dssp CTTCCSCEECCC--CSCCS-CCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCSS-C--CSEEEEEECTTC
T ss_pred ECCCceeEeecc--ccCCC-ceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeecccC-C--CCceEEEECCCC
Confidence 655544332211 01111 123333 5887776543 458999999876654432211 1 112344444 56
Q ss_pred eEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCce--eEeEEEeeCCcEEEEec-CCEEEEEECCCCC
Q 036621 266 SLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGI--FQPLLFWKKGAFFVESN-SSQLLLYEPGTGE 331 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~ 331 (376)
.|++.... ...+.+|..+. ... .+ ..... ..-+++..+|.+++... ++.+..|++...+
T Consensus 204 ~l~v~~~~--~~~v~~~~~~~~~~~----~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 204 TVYVTEHN--TNQVVKLLAGSTTST----VL-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CEEEEETT--TSCEEEECTTCSCCE----EC-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CEEEEECC--CCcEEEEcCCCCcce----ee-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 77777654 45566665544 211 12 22222 23344556677777654 5778888887653
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.00 E-value=20 Score=31.64 Aligned_cols=68 Identities=12% Similarity=-0.038 Sum_probs=39.3
Q ss_pred CCeEEEEEEecCCCEEEEEEecCC--ceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKK--NWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~--~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
+|++.+.... +..+.||.+... ....+..+........-+.+..++.++....++.++.|+...+.++
T Consensus 216 ~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~ 285 (377)
T 3dwl_C 216 SGNALAYAGH--DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWA 285 (377)
T ss_dssp TSSCEEEEET--TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---C
T ss_pred CCCEEEEEeC--CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceE
Confidence 5665555555 789999999872 2222333311222234456677888877777777778888755543
No 66
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=84.93 E-value=20 Score=31.57 Aligned_cols=114 Identities=13% Similarity=0.130 Sum_probs=67.1
Q ss_pred Cce-EEEEecccCCCCceEEEEEEcCccceeee-c---CCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecC--
Q 036621 215 DGA-FYWLLKLENDNDSYVILSFNMADEKFQEI-Q---GPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRK-- 286 (376)
Q Consensus 215 ~G~-lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~---~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~-- 286 (376)
+|. +|..... ...|..||+.+.++..+ . .|..... ...+... +|+..++........+.||.++.
T Consensus 221 dg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~--~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 221 DGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQG--SGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp TSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCC--EEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred CCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCC--cccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 675 4444422 45788899887766544 2 2222111 2234433 67754444432157899999973
Q ss_pred CceeeEEEEccCCceeEeEEEeeCCcEEEEec--CCEEEE--EECCCCCEEEEE
Q 036621 287 KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN--SSQLLL--YEPGTGELRDFE 336 (376)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~--yd~~~~~~~~v~ 336 (376)
..+..+..+ +......-+++..+++.++... +..+.+ +|+++++++.+.
T Consensus 294 g~~~~~~~~-~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 294 GTLTKVGYQ-LTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CCEEEEEEE-ECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CcEEEeeEe-cCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 677777777 4422234466777787544433 455555 688899888775
No 67
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=84.83 E-value=16 Score=30.46 Aligned_cols=197 Identities=10% Similarity=-0.056 Sum_probs=94.8
Q ss_pred eceEEEecCCCeEEEEecCc-ccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEGLNNRITLWNIAT-RESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|-.++......+++||..+ ++...+...... .. ...+.+.+. +++ ++... ... ... ..+.+
T Consensus 52 dg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~------~~~~~~spd-g~~-l~~~~--~~~---~~~--~~l~~ 114 (297)
T 2ojh_A 52 DGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT--IC------NNDHGISPD-GAL-YAISD--KVE---FGK--SAIYL 114 (297)
T ss_dssp TSSEEEEEETTEEEEEESSSCCSCEECCCTTCC--CB------CSCCEECTT-SSE-EEEEE--CTT---TSS--CEEEE
T ss_pred CCCEEEEEcCCeEEEEeCCCCCCceEecccccc--cc------ccceEECCC-CCE-EEEEE--eCC---CCc--ceEEE
Confidence 45444444457899999999 887766533311 11 112333332 222 22221 111 122 57777
Q ss_pred EEcCCCceEeccCCCccccCCcceeEeCce-EEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CC
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G 265 (376)
++..++.-+.+....... .....-+|. +++..... ....|..+|..+.....+..... . ...+.-. +|
T Consensus 115 ~~~~~~~~~~~~~~~~~~---~~~~spdg~~l~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~--~--~~~~~~s~dg 184 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNLPSY---WHGWSPDGKSFTYCGIRD---QVFDIYSMDIDSGVETRLTHGEG--R--NDGPDYSPDG 184 (297)
T ss_dssp EETTCCCCEECCSSSSEE---EEEECTTSSEEEEEEEET---TEEEEEEEETTTCCEEECCCSSS--C--EEEEEECTTS
T ss_pred EECCCCceEEeecCCCcc---ceEECCCCCEEEEEECCC---CceEEEEEECCCCcceEcccCCC--c--cccceECCCC
Confidence 777766655444221100 001111454 34333321 23467777777666554422111 1 1223332 66
Q ss_pred eEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcE-EEEecC-----------CEEEEEECCCCC
Q 036621 266 SLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAF-FVESNS-----------SQLLLYEPGTGE 331 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l-~~~~~~-----------~~~~~yd~~~~~ 331 (376)
+..++... ....+.||.++. ... ..+.........+.+..+++. ++...+ ..++.+|+++++
T Consensus 185 ~~l~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 185 RWIYFNSS-RTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp SEEEEEEC-TTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred CEEEEEec-CCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 64444432 156789999873 222 223111222333455666764 444332 459999999988
Q ss_pred EEEEE
Q 036621 332 LRDFE 336 (376)
Q Consensus 332 ~~~v~ 336 (376)
.+.+.
T Consensus 261 ~~~~~ 265 (297)
T 2ojh_A 261 VETLF 265 (297)
T ss_dssp CEEEE
T ss_pred ceeee
Confidence 76664
No 68
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=84.73 E-value=17 Score=30.67 Aligned_cols=107 Identities=9% Similarity=0.086 Sum_probs=61.8
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEE
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQL 293 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~ 293 (376)
+|.+|+.... ...|..||.. .++..+.+|.... ....++.. +|.|++.... ...+..+..+ ..+. ..
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~--~~~~i~~~~~g~l~v~~~~--~~~v~~~d~~-g~~~-~~ 97 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTPDA--KVMCLIVSSLGDIWFTENG--ANKIGKLSKK-GGFT-EY 97 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTC--CEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEE-EE
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEECCCCCC--cceeEEECCCCCEEEEecC--CCeEEEECCC-CCeE-Ee
Confidence 5887776532 4589999998 7777776664322 13344443 5778776543 3445444333 4442 22
Q ss_pred EEccCC-ceeEeEEEeeCCcEEEEec-CCEEEEEECCCCCEEEE
Q 036621 294 TVGPFI-GIFQPLLFWKKGAFFVESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 294 ~i~~~~-~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~~v 335 (376)
.+ +.. ....-+++..++.+++... +..++.||++ ++...+
T Consensus 98 ~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 98 PL-PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp EC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred cC-CCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc
Confidence 23 211 1123344455677877665 5689999998 666654
No 69
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=84.54 E-value=17 Score=30.64 Aligned_cols=186 Identities=11% Similarity=0.144 Sum_probs=97.2
Q ss_pred eeceEEEecC--CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceE
Q 036621 108 YCGIVFIEGL--NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLV 185 (376)
Q Consensus 108 ~~Gll~~~~~--~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (376)
.+|.+.+... ...+.++|+..+....+..... .. ..++.+|+.. . ++.... .+ ..+
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---~~------~~~i~~~~~g-~--l~v~~~---~~-------~~i 144 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---QH------PRGVTVDNKG-R--IIVVEC---KV-------MRV 144 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---SC------EEEEEECTTS-C--EEEEET---TT-------TEE
T ss_pred CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---CC------ceEEEEeCCC-C--EEEEEC---CC-------CEE
Confidence 4677766652 6789999965444433432211 11 3467777643 2 222210 11 366
Q ss_pred EEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE
Q 036621 186 AVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY 263 (376)
Q Consensus 186 ~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~ 263 (376)
.+|+.....-+....... ... ..++.+ +|.+|..... ...|..||...+....+..+.... ....++..
T Consensus 145 ~~~~~~g~~~~~~~~~~~-~~~-p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~--~p~~i~~d 215 (286)
T 1q7f_A 145 IIFDQNGNVLHKFGCSKH-LEF-PNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITN--YPIGVGIN 215 (286)
T ss_dssp EEECTTSCEEEEEECTTT-CSS-EEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSC--SEEEEEEC
T ss_pred EEEcCCCCEEEEeCCCCc-cCC-cEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCccC--CCcEEEEC
Confidence 777765443333321000 111 123444 5787765443 458999999776655554332111 12344443
Q ss_pred -CCeEEEEEEecCCC-EEEEEEecCCceeeEEEEc-cCCc-eeEeEEEeeCCcEEEEecCCEEEEEECCC
Q 036621 264 -YQSLSLLILDNVDH-CFKIWVMRKKNWIKQLTVG-PFIG-IFQPLLFWKKGAFFVESNSSQLLLYEPGT 329 (376)
Q Consensus 264 -~G~L~~~~~~~~~~-~l~iW~l~~~~W~~~~~i~-~~~~-~~~~~~~~~~~~l~~~~~~~~~~~yd~~~ 329 (376)
+|.|++.... .. .+.+|..+.. .+..+. .... ...-+++..+|.+++...+..+.+|+...
T Consensus 216 ~~G~l~v~~~~--~~~~i~~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 216 SNGEILIADNH--NNFNLTIFTQDGQ---LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp TTCCEEEEECS--SSCEEEEECTTSC---EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCCEEEEeCC--CCEEEEEECCCCC---EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 6888877764 43 7888864332 222221 1111 12335566778888776677888888754
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=84.49 E-value=19 Score=31.00 Aligned_cols=137 Identities=9% Similarity=0.066 Sum_probs=69.6
Q ss_pred ceEEEEEcC--CCceEeccCCCccccCCcceeE--eCceEEEEecccCCCCceEEEEEEcCcc-ceeee---cCCCCCCC
Q 036621 183 SLVAVYTLR--TNSWKNLKPIDYTMRLSSERTY--FDGAFYWLLKLENDNDSYVILSFNMADE-KFQEI---QGPCILES 254 (376)
Q Consensus 183 ~~~~vyss~--t~~W~~~~~~p~~~~~~~~~v~--~~G~lYwl~~~~~~~~~~~il~fD~~~~-~~~~i---~~P~~~~~ 254 (376)
..+.+|+.. ++.++.+..++..- . ...+. -+|...+.... ....|..||+.+. ....+ ......
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~s~dg~~l~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~~~~-- 131 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG-S-LTHISTDHQGQFVFVGSY----NAGNVSVTRLEDGLPVGVVDVVEGLDGC-- 131 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS-C-CSEEEECTTSSEEEEEET----TTTEEEEEEEETTEEEEEEEEECCCTTB--
T ss_pred CeEEEEEecCCCCceeeccccccCC-C-CcEEEEcCCCCEEEEEec----CCCeEEEEECCCCccccccccccCCCCc--
Confidence 367788776 67777654222100 1 11222 25653333332 1346888888322 22222 222211
Q ss_pred CCceEEEEE-CCeEEEEEE-ecCCCEEEEEEecC-CceeeEE--EEccCC--ceeEeEEEeeCCc-EEEEe-cCCEEEEE
Q 036621 255 SLDVTLGIY-YQSLSLLIL-DNVDHCFKIWVMRK-KNWIKQL--TVGPFI--GIFQPLLFWKKGA-FFVES-NSSQLLLY 325 (376)
Q Consensus 255 ~~~~~l~~~-~G~L~~~~~-~~~~~~l~iW~l~~-~~W~~~~--~i~~~~--~~~~~~~~~~~~~-l~~~~-~~~~~~~y 325 (376)
..+... +|+..++.. . ...+.+|.++. ....... .+ ... ....-+.+..+++ +++.. .+..+.+|
T Consensus 132 ---~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~ 205 (343)
T 1ri6_A 132 ---HSANISPDNRTLWVPALK--QDRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVW 205 (343)
T ss_dssp ---CCCEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ---eEEEECCCCCEEEEecCC--CCEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 112222 565333333 4 67899999987 6666544 33 221 1233355666776 44444 46789999
Q ss_pred ECC--CCCEE
Q 036621 326 EPG--TGELR 333 (376)
Q Consensus 326 d~~--~~~~~ 333 (376)
|++ +++++
T Consensus 206 ~~~~~~g~~~ 215 (343)
T 1ri6_A 206 ELKDPHGNIE 215 (343)
T ss_dssp ESSCTTSCCE
T ss_pred EecCCCCcEE
Confidence 984 45544
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=84.32 E-value=20 Score=31.27 Aligned_cols=98 Identities=12% Similarity=0.074 Sum_probs=60.2
Q ss_pred ceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-C--CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeE
Q 036621 230 SYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-Y--QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPL 305 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~--G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~ 305 (376)
...|..+|+..++...+ .+..+... -..+.-. + |.+.+.... +..+.||.++...|..+..+........-+
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSC--EEEEEECCGGGCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CCcEEEEecCCCcceeeeEecCCCCc--EEEEEeCCCCCCCEEEEecc--CCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 34677888875555544 33322221 2233332 2 666666665 688999999998888887772233334445
Q ss_pred EEeeC--CcEE-EEecCCEEEEEECCCCC
Q 036621 306 LFWKK--GAFF-VESNSSQLLLYEPGTGE 331 (376)
Q Consensus 306 ~~~~~--~~l~-~~~~~~~~~~yd~~~~~ 331 (376)
.+..+ +.++ ....++.+.+||++++.
T Consensus 108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred EeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 55555 5554 44557889999999873
No 72
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=83.18 E-value=21 Score=30.43 Aligned_cols=196 Identities=9% Similarity=0.039 Sum_probs=104.8
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
++........++.+||.++ ...+..+. .. ..++.+++... ++.. . . .. ..+.+|+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~----~~------~~~l~~~~dg~---l~v~-~-~-~~-------~~i~~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS----HH------QNGHCLNKQGH---LIAC-S-H-GL-------RRLERQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC----SS------EEEEEECTTCC---EEEE-E-T-TT-------TEEEEECS
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC----CC------cceeeECCCCc---EEEE-e-c-CC-------CeEEEEcC
Confidence 4455555678999999998 55443321 11 35777776432 2222 1 1 11 46788888
Q ss_pred CCCceEeccCCCc--cccC-CcceeEeCceEEEEecc-c-----------CCCCceEEEEEEcCccceeeecCCCCCCCC
Q 036621 191 RTNSWKNLKPIDY--TMRL-SSERTYFDGAFYWLLKL-E-----------NDNDSYVILSFNMADEKFQEIQGPCILESS 255 (376)
Q Consensus 191 ~t~~W~~~~~~p~--~~~~-~~~~v~~~G~lYwl~~~-~-----------~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 255 (376)
.++..+....... .... ..-.+--+|.+|+.... + .......|..+|.. .+...+.-. ..
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~-- 172 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RV-- 172 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CS--
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CC--
Confidence 7777665532111 1111 01122236887774210 0 00013489999987 555544211 11
Q ss_pred CceEEEEE-CCeEEEEEEecCCCEEEEEEecC-Cce-eeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCCE
Q 036621 256 LDVTLGIY-YQSLSLLILDNVDHCFKIWVMRK-KNW-IKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGEL 332 (376)
Q Consensus 256 ~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~-~~W-~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~ 332 (376)
....++.. +|++. +... ....+.+|.++. ... .....+........-+++..+|.+++.. +..+..||++++.+
T Consensus 173 ~~~gi~~s~dg~~l-v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDT-GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDEL 249 (296)
T ss_dssp SEEEEEECTTSCEE-EEET-TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEE
T ss_pred CCccEEECCCCCEE-EEeC-CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEE
Confidence 12334443 67765 4332 257888888874 544 2222221111112336667788888777 78899999997777
Q ss_pred EEEEEe
Q 036621 333 RDFELE 338 (376)
Q Consensus 333 ~~v~~~ 338 (376)
+.+...
T Consensus 250 ~~~~~~ 255 (296)
T 3e5z_A 250 GRVLTP 255 (296)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 766554
No 73
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=82.75 E-value=28 Score=31.66 Aligned_cols=186 Identities=6% Similarity=-0.004 Sum_probs=97.9
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEec
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNL 198 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (376)
..+++||..+++...+..... . ...+.+.|. +++-++.. . .+ .. ..+.+++..++..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~----~------~~~~~~spd-g~~la~~~-~---~~---g~--~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR----H------NGAPAFSPD-GSKLAFAL-S---KT---GS--LNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS----C------EEEEEECTT-SSEEEEEE-C---TT---SS--CEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC----c------ccCEEEcCC-CCEEEEEE-e---cC---CC--ceEEEEECCCCCEEeC
Confidence 589999999998876643321 1 345555553 23322222 1 11 12 5788899988776655
Q ss_pred cCCCccccCCcceeEeCce-EEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEE-ecC
Q 036621 199 KPIDYTMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLIL-DNV 275 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~-~~~ 275 (376)
........ .....-+|. +++....+ ....|..+|+.+.+...+..... ....+.-. +|+..++.. ...
T Consensus 263 ~~~~~~~~--~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 263 TDGRSNNT--EPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWEGS----QNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp CCCSSCEE--EEEECTTSSEEEEEECTT---SSCEEEEEETTSSCCEECCCSSS----EEEEEEECTTSSEEEEEEECSS
T ss_pred cCCCCccc--ceEECCCCCEEEEEECCC---CCcEEEEEECCCCCEEEEecCCC----cccCeEECCCCCEEEEEECcCC
Confidence 43221000 001112564 44444322 24478889998876554432211 11223322 676444444 323
Q ss_pred CCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcE-EEEecCC---EEEEEECCCCCEEEEEE
Q 036621 276 DHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAF-FVESNSS---QLLLYEPGTGELRDFEL 337 (376)
Q Consensus 276 ~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l-~~~~~~~---~~~~yd~~~~~~~~v~~ 337 (376)
...+.+|.++..... .+ ..........+..+|.. ++...++ .++.+|++++..+.+.-
T Consensus 334 ~~~i~~~d~~~~~~~---~l-~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQ---VL-SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp CEEEEEEETTTCCEE---EC-CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred ceEEEEEECCCCCEE---Ee-cCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 456777777664432 23 11112334555667764 4444333 69999999888887754
No 74
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=81.47 E-value=27 Score=30.61 Aligned_cols=142 Identities=7% Similarity=0.107 Sum_probs=74.1
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~ 259 (376)
..+.+++..++.|.....+.......-.++.+ +|.....+.. ...+..+|..++.+..+ .+..+... -..
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-----D~~v~iw~~~~~~~~~~~~~~~h~~~--v~~ 110 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-----DATTCIWKKNQDDFECVTTLEGHENE--VKS 110 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-----TSCEEEEEECCC-EEEEEEECCCSSC--EEE
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-----CCcEEEEEccCCCeEEEEEccCCCCC--ceE
Confidence 47888888888775332111000000001111 4444333332 34677788877765544 33332221 222
Q ss_pred EEEE-CCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEE
Q 036621 260 LGIY-YQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELR 333 (376)
Q Consensus 260 l~~~-~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~ 333 (376)
+.-. +|++.+.... +..+.||.++. ..+..+..+........-+.+..++++++. ..++.+.+||.+++.+.
T Consensus 111 v~~sp~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 111 VAWAPSGNLLATCSR--DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp EEECTTSSEEEEEET--TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred EEEeCCCCEEEEEEC--CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 3333 5776666655 78899999987 666666655222222334455556664443 44667888888776554
No 75
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=81.03 E-value=24 Score=29.70 Aligned_cols=191 Identities=10% Similarity=0.040 Sum_probs=97.7
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|.+.+.. ....++++||. ++...++.+... .. ..++..|+.. . +... . . .. ..+.
T Consensus 71 ~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~--~~------~~~i~~~~~g-~--l~v~-~-~-~~-------~~i~ 128 (300)
T 2qc5_A 71 SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD--SG------PYGITEGLNG-D--IWFT-Q-L-NG-------DRIG 128 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--CC------EEEEEECSTT-C--EEEE-E-T-TT-------TEEE
T ss_pred CCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC--CC------CccceECCCC-C--EEEE-c-c-CC-------CeEE
Confidence 456665554 45789999998 666544332111 11 3566666532 2 2221 1 1 11 3556
Q ss_pred EEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-
Q 036621 187 VYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY- 263 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~- 263 (376)
.|+.. +...... ++..... ..++.+ +|.+|+.... ...|..||. +.++..+..|..... ...+...
T Consensus 129 ~~~~~-g~~~~~~-~~~~~~~-~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~~--~~~i~~d~ 197 (300)
T 2qc5_A 129 KLTAD-GTIYEYD-LPNKGSY-PAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNAAA--PVGITSGN 197 (300)
T ss_dssp EECTT-SCEEEEE-CSSTTCC-EEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCC--EEEEEECT
T ss_pred EECCC-CCEEEcc-CCCCCCC-ceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCCCC--cceEEECC
Confidence 66655 4443322 1110111 113333 5787665532 458999999 666666665543321 2344443
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCc-eeEeEEEeeCCcEEEEec-CCEEEEEECCCCCEEEEEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG-IFQPLLFWKKGAFFVESN-SSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~-~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~~v~~ 337 (376)
+|.|++.... ...+.++.. +...... .+ +... ...-+++..+|.+++... +..+..||+ ++++..+..
T Consensus 198 ~g~l~v~~~~--~~~i~~~~~-~g~~~~~-~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 267 (300)
T 2qc5_A 198 DGALWFVEIM--GNKIGRITT-TGEISEY-DI-PTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQL 267 (300)
T ss_dssp TSSEEEEETT--TTEEEEECT-TCCEEEE-EC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEEC
T ss_pred CCCEEEEccC--CCEEEEEcC-CCcEEEE-EC-CCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEEC
Confidence 6788777654 445555544 2333322 22 2111 123344556677877764 478999999 466665443
No 76
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=80.91 E-value=22 Score=30.74 Aligned_cols=103 Identities=10% Similarity=0.006 Sum_probs=58.9
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEec--CCceee
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMR--KKNWIK 291 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~--~~~W~~ 291 (376)
+|.+||.... ...|..||...+.-..+..+.. ...++.. +|+|+++... .....|+.++ +.+.+.
T Consensus 42 ~g~lyv~d~~-----~~~I~~~d~~g~~~~~~~~~~~-----p~gia~~~dG~l~vad~~--~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 42 DGTIFVTNHE-----VGEIVSITPDGNQQIHATVEGK-----VSGLAFTSNGDLVATGWN--ADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCCEEEEEECSSE-----EEEEEECTTSCEEEEEEC--TTSCEEEEEECTTSCEEE
T ss_pred CCCEEEEeCC-----CCeEEEECCCCceEEEEeCCCC-----ceeEEEcCCCcEEEEecc--CCcceEEEEcCCCCeEEE
Confidence 7889998754 4579999998764444454421 2334443 6888776653 2234566654 355555
Q ss_pred EEEEccCCceeEeEEEeeCCcEEEEec-CCEEEEEECCCC
Q 036621 292 QLTVGPFIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGTG 330 (376)
Q Consensus 292 ~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~ 330 (376)
+..+ +......-.+...++.+++... .+.++.+|+.++
T Consensus 110 ~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 110 LLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 5444 2211112223344455666553 678999998765
No 77
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=80.66 E-value=34 Score=31.24 Aligned_cols=97 Identities=7% Similarity=-0.000 Sum_probs=52.5
Q ss_pred ceEEEEEEcCccceee--e-cCCCCCCCCCceEEEEE-C---CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCcee
Q 036621 230 SYVILSFNMADEKFQE--I-QGPCILESSLDVTLGIY-Y---QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIF 302 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~--i-~~P~~~~~~~~~~l~~~-~---G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~ 302 (376)
...+..+|+.+.+... + .+..+.. .-..+.-. + |++.+.... +..+.||.+....-...... ......
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~-~h~~~v 244 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVS--MLTDVHLIKDSDGHQFIITSDR--DEHIKISHYPQCFIVDKWLF-GHKHFV 244 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSS--CEEEEEEEECTTSCEEEEEEET--TSCEEEEEESCTTCEEEECC-CCSSCE
T ss_pred CCcEEEEecCCcccccccceeeecccC--ceEEEEEcCCCCCCcEEEEEcC--CCcEEEEECCCCceeeeeec-CCCCce
Confidence 3467888887655431 1 1111111 12223333 5 666666655 68899999876332221111 122223
Q ss_pred EeEEEeeCCcEEEE-ecCCEEEEEECCCCCE
Q 036621 303 QPLLFWKKGAFFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 303 ~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~ 332 (376)
.-+++. ++.+++. ..++.+.+||+++++.
T Consensus 245 ~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 245 SSICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp EEEEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred EEEEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 445556 6776554 4578899999998864
No 78
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=80.58 E-value=16 Score=31.84 Aligned_cols=55 Identities=15% Similarity=-0.039 Sum_probs=35.1
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecC
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRK 286 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~ 286 (376)
...|..||...+....+..|..........+..-+|.|++.... ...+.++.++.
T Consensus 259 ~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~--~~~i~~~~~~~ 313 (322)
T 2fp8_A 259 DPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF--HGSVGILVYDK 313 (322)
T ss_dssp EEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS--CSEEEEEEC--
T ss_pred ccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC--CCceEEEeccc
Confidence 35799999988777778777643211223344568888887765 56666666543
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.28 E-value=34 Score=31.07 Aligned_cols=57 Identities=12% Similarity=0.105 Sum_probs=31.2
Q ss_pred CCEEEEEEecCCceeeEEEEc-cC-CceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEEE
Q 036621 276 DHCFKIWVMRKKNWIKQLTVG-PF-IGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELRD 334 (376)
Q Consensus 276 ~~~l~iW~l~~~~W~~~~~i~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~~ 334 (376)
...+.||...... .+..+. +. ..+.....+..+|.++....++.+.++|+++++.++
T Consensus 377 ~~~i~iwd~~~g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNSGK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSSCC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEECCCCc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 3468888765532 223331 11 122333456678888777778889999999887654
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=80.22 E-value=28 Score=30.05 Aligned_cols=191 Identities=8% Similarity=-0.008 Sum_probs=93.1
Q ss_pred eEEEecCCCeEEEEecCccc--ceecCCCccCCCCccccccceEEEeeeCC-CCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 111 IVFIEGLNNRITLWNIATRE--SITLPKYRAIIPQYTRVFGTKIGFGLDPK-TKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~--~~~LP~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|+.......+.+||..+++ ...+.......... ...+.+.+. ..+-+.+.... .+ ..+.+
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~~~~~l~~~~---~d-------~~i~i 194 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD------CWTVAFGNAYNQEERVVCAGY---DN-------GDIKL 194 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC------EEEEEEECCCC-CCCEEEEEE---TT-------SEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc------eEEEEEEeccCCCCCEEEEEc---cC-------CeEEE
Confidence 44444456789999998876 22333222211111 233433221 11112233221 22 47888
Q ss_pred EEcCCCceEeccCCCccccCCcceeEe-----CceEEEEecccCCCCceEEEEEEcCcccee-eec---CCCCCCCCCce
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYF-----DGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQ---GPCILESSLDV 258 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~-----~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~---~P~~~~~~~~~ 258 (376)
|+.+++.=......... -.++.+ +|.....+.. ...|..||+.+.+.. .+. +..+.. .-.
T Consensus 195 ~d~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~v~ 263 (357)
T 3i2n_A 195 FDLRNMALRWETNIKNG----VCSLEFDRKDISMNKLVATSL-----EGKFHVFDMRTQHPTKGFASVSEKAHKS--TVW 263 (357)
T ss_dssp EETTTTEEEEEEECSSC----EEEEEESCSSSSCCEEEEEES-----TTEEEEEEEEEEETTTEEEEEEEECCSS--CEE
T ss_pred EECccCceeeecCCCCc----eEEEEcCCCCCCCCEEEEECC-----CCeEEEEeCcCCCcccceeeeccCCCcC--CEE
Confidence 88887653222211110 111222 4444444433 457888888764321 111 111111 123
Q ss_pred EEEEE-CCe-EEEEEEecCCCEEEEEEecC-----------------CceeeEEEEccCCceeEeEEEeeCCcEEE--Ee
Q 036621 259 TLGIY-YQS-LSLLILDNVDHCFKIWVMRK-----------------KNWIKQLTVGPFIGIFQPLLFWKKGAFFV--ES 317 (376)
Q Consensus 259 ~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~-----------------~~W~~~~~i~~~~~~~~~~~~~~~~~l~~--~~ 317 (376)
.+... +|+ +.+.... +..+.||.+.. ..+..+..+........-+.+..++..++ ..
T Consensus 264 ~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 264 QVRHLPQNRELFLTAGG--AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp EEEEETTEEEEEEEEET--TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEECCCCCcEEEEEeC--CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 33333 455 4444445 78999999985 13456666522222234455666776554 34
Q ss_pred cCCEEEEEECCCC
Q 036621 318 NSSQLLLYEPGTG 330 (376)
Q Consensus 318 ~~~~~~~yd~~~~ 330 (376)
.++.+.+||.++.
T Consensus 342 ~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 342 FDQTVRVLIVTKL 354 (357)
T ss_dssp TTSEEEEEEECC-
T ss_pred CCCcEEEEECCCc
Confidence 5788999998864
No 81
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=80.00 E-value=26 Score=29.55 Aligned_cols=95 Identities=12% Similarity=0.156 Sum_probs=55.0
Q ss_pred ceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEE
Q 036621 230 SYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLF 307 (376)
Q Consensus 230 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (376)
...|..||+.+.+.. .+..... .-..+... +|. .+.... +..+.+|.+...+-...... . .....-+.+
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~-l~~~~~--dg~v~iwd~~~~~~~~~~~~-~-~~~i~~~~~ 274 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGD-IVSCGE--DRTVRIWSKENGSLKQVITL-P-AISIWSVDC 274 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSC-EEEEET--TSEEEEECTTTCCEEEEEEC-S-SSCEEEEEE
T ss_pred CCeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCC-EEEEec--CCEEEEEECCCCceeEEEec-c-CceEEEEEE
Confidence 458999999875532 2232111 12233333 454 223333 78899998877443333222 2 212344555
Q ss_pred eeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 308 WKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 308 ~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
..++.++....++.+.+||++++++.
T Consensus 275 ~~~~~~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 275 MSNGDIIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp CTTSCEEEEETTSCEEEEESCGGGCC
T ss_pred ccCCCEEEEeCCCcEEEEeCCCCcee
Confidence 66777777677888999999987654
No 82
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=80.00 E-value=42 Score=31.92 Aligned_cols=193 Identities=6% Similarity=-0.028 Sum_probs=100.8
Q ss_pred eeceEEEec-CCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLV 185 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (376)
-+|.+++.. ....+.+||+.|++... ++... . ..++.++|.. +|-++.- .+ ..+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-----~------~~~v~~spdg-~~l~v~~-----~d-------~~V 202 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-----A------VHISRMSASG-RYLLVIG-----RD-------ARI 202 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-----T------EEEEEECTTS-CEEEEEE-----TT-------SEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-----c------cceEEECCCC-CEEEEEC-----CC-------CeE
Confidence 367776665 46789999999988653 32111 1 2355555532 3322221 11 378
Q ss_pred EEEEc--CCCceEeccCCCccccCCcceeEe------CceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCC----
Q 036621 186 AVYTL--RTNSWKNLKPIDYTMRLSSERTYF------DGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCIL---- 252 (376)
Q Consensus 186 ~vyss--~t~~W~~~~~~p~~~~~~~~~v~~------~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~---- 252 (376)
.+|+. .+.. .+..++.. .. ...+.+ +|..-+.... ....|..+|..+.+. ..++.+...
T Consensus 203 ~v~D~~~~t~~--~~~~i~~g-~~-p~~va~sp~~~~dg~~l~v~~~----~~~~v~v~D~~t~~~~~~i~~~g~~~~~~ 274 (543)
T 1nir_A 203 DMIDLWAKEPT--KVAEIKIG-IE-ARSVESSKFKGYEDRYTIAGAY----WPPQFAIMDGETLEPKQIVSTRGMTVDTQ 274 (543)
T ss_dssp EEEETTSSSCE--EEEEEECC-SE-EEEEEECCSTTCTTTEEEEEEE----ESSEEEEEETTTCCEEEEEECCEECSSSC
T ss_pred EEEECcCCCCc--EEEEEecC-CC-cceEEeCCCcCCCCCEEEEEEc----cCCeEEEEeccccccceeecccCcccCcc
Confidence 88888 4432 22222210 00 112222 5654444433 245788999877654 333442210
Q ss_pred ---CCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ec-CCEEEEEE
Q 036621 253 ---ESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SN-SSQLLLYE 326 (376)
Q Consensus 253 ---~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~yd 326 (376)
.......+... +|...++... ....+.+|-+.+..-.++..| +......-+++..+++.++. .. +..+.++|
T Consensus 275 ~~~~~~~v~~i~~s~~~~~~~vs~~-~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 275 TYHPEPRVAAIIASHEHPEFIVNVK-ETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEET-TTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccccCCceEEEEECCCCCEEEEEEC-CCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 00012233333 3555555552 267888888776322234455 43333444677778875544 32 56899999
Q ss_pred CCCCCEEE
Q 036621 327 PGTGELRD 334 (376)
Q Consensus 327 ~~~~~~~~ 334 (376)
.+++++..
T Consensus 353 ~~tg~l~~ 360 (543)
T 1nir_A 353 SKDRRLSA 360 (543)
T ss_dssp TTTTEEEE
T ss_pred CCCCeEEE
Confidence 99987654
No 83
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=79.74 E-value=32 Score=30.44 Aligned_cols=111 Identities=12% Similarity=0.073 Sum_probs=63.5
Q ss_pred cceeEeCceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCC------CCCCceEEEEECCeEEEEEEecCCCEEEE
Q 036621 209 SERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCIL------ESSLDVTLGIYYQSLSLLILDNVDHCFKI 281 (376)
Q Consensus 209 ~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~------~~~~~~~l~~~~G~L~~~~~~~~~~~l~i 281 (376)
..++..+|.+|.... ...|.+||..+.+... .+.+... ........+..+|.+++... ...+..
T Consensus 47 ~~p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a 117 (376)
T 3q7m_A 47 LHPALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYA 117 (376)
T ss_dssp CCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEE
T ss_pred eccEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEE
Confidence 357888999998763 3489999997654322 2333221 11112345556777776543 344555
Q ss_pred EEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 282 WVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 282 W~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
+-.+. ..|... + +......|. ..++.+++...++.++.+|.++++..
T Consensus 118 ~d~~tG~~~W~~~--~-~~~~~~~p~--~~~~~v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 118 LNTSDGTVAWQTK--V-AGEALSRPV--VSDGLVLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp EETTTCCEEEEEE--C-SSCCCSCCE--EETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCCCCEEEEEe--C-CCceEcCCE--EECCEEEEEcCCCeEEEEECCCCcEE
Confidence 55443 566543 2 111112222 23566777666788999999988643
No 84
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=79.65 E-value=25 Score=29.14 Aligned_cols=187 Identities=14% Similarity=0.133 Sum_probs=92.4
Q ss_pred eeceEEE-e-cCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceE
Q 036621 108 YCGIVFI-E-GLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLV 185 (376)
Q Consensus 108 ~~Gll~~-~-~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (376)
.+|.+.+ . .....+.++|+-++....++.... .. ..++.+|+.. . +... . .+ ..+
T Consensus 33 ~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~------p~~i~~~~~g-~--l~v~-~---~~-------~~i 89 (270)
T 1rwi_B 33 SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL---YQ------PQGLAVDGAG-T--VYVT-D---FN-------NRV 89 (270)
T ss_dssp TTCCEEEEECSSSCEEEEECC-----EECCCCSC---CS------CCCEEECTTC-C--EEEE-E---TT-------TEE
T ss_pred CCCCEEEEccCCCCcEEEecCCCcccceEeeCCc---CC------cceeEECCCC-C--EEEE-c---CC-------CEE
Confidence 3566655 4 355788999998877665543221 11 2355666542 2 2222 1 11 367
Q ss_pred EEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE
Q 036621 186 AVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY 263 (376)
Q Consensus 186 ~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~ 263 (376)
.+|+..++.-....... ... ..++.+ +|.+|+.... ...|..||..+......... ... ....++..
T Consensus 90 ~~~d~~~~~~~~~~~~~--~~~-p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~~--~p~~i~~~ 158 (270)
T 1rwi_B 90 VTLAAGSNNQTVLPFDG--LNY-PEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFT-GLN--DPDGVAVD 158 (270)
T ss_dssp EEECTTCSCCEECCCCS--CSS-EEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCC-SCC--SCCCEEEC
T ss_pred EEEeCCCceEeeeecCC--cCC-CcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccc-cCC--CceeEEEe
Confidence 77777665443332110 011 113333 6887776543 45788888766544332211 111 12234444
Q ss_pred -CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCce--eEeEEEeeCCcEEEEec-CCEEEEEECCCCCEEE
Q 036621 264 -YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGI--FQPLLFWKKGAFFVESN-SSQLLLYEPGTGELRD 334 (376)
Q Consensus 264 -~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~~ 334 (376)
+|+|++.... ...+.+|..+... ... . ..... ..-+++..+|.+++... +..+..||++++....
T Consensus 159 ~~g~l~v~~~~--~~~i~~~~~~~~~--~~~-~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 159 NSGNVYVTDTD--NNRVVKLEAESNN--QVV-L-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp TTCCEEEEEGG--GTEEEEECTTTCC--EEE-C-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred CCCCEEEEECC--CCEEEEEecCCCc--eEe-e-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence 6887776654 4566666654421 111 1 11111 23345555677777664 5679999998876544
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=78.91 E-value=31 Score=29.75 Aligned_cols=54 Identities=9% Similarity=0.253 Sum_probs=33.6
Q ss_pred CCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeCC----cEEE-EecCCEEEEEECCC
Q 036621 276 DHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKKG----AFFV-ESNSSQLLLYEPGT 329 (376)
Q Consensus 276 ~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~----~l~~-~~~~~~~~~yd~~~ 329 (376)
+..+.||.++. ..|..+..+........-+++..++ .+++ ...++.+.+||.++
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 78899999976 6787776652222223334444443 4444 44577899999876
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=78.82 E-value=29 Score=29.30 Aligned_cols=186 Identities=13% Similarity=0.048 Sum_probs=92.8
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
+++|+.....+.+.+||..+++....-... ... ...+.+.+. +.+-+..- .+ ..+.++
T Consensus 29 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~---~~~------v~~~~~~~~-~~~l~~~~-----~d-------g~i~~~ 86 (313)
T 3odt_A 29 DSKVASVSRDGTVRLWSKDDQWLGTVVYTG---QGF------LNSVCYDSE-KELLLFGG-----KD-------TMINGV 86 (313)
T ss_dssp TTEEEEEETTSEEEEEEESSSEEEEEEEEC---SSC------EEEEEEETT-TTEEEEEE-----TT-------SCEEEE
T ss_pred CCEEEEEEcCCcEEEEECCCCEEEEEeecC---Ccc------EEEEEECCC-CCEEEEec-----CC-------CeEEEE
Confidence 445555556778999999777654332211 111 345666653 23222221 22 356666
Q ss_pred EcCCC-ceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE--CC
Q 036621 189 TLRTN-SWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY--YQ 265 (376)
Q Consensus 189 ss~t~-~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~--~G 265 (376)
+..+. ..+....+... ...-..+..+|.....+.. ...|..+|. .+....+...... ...+... ++
T Consensus 87 ~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~l~~~~~-----d~~i~~~d~-~~~~~~~~~~~~~----v~~~~~~~~~~ 155 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGH-QGNVCSLSFQDGVVISGSW-----DKTAKVWKE-GSLVYNLQAHNAS----VWDAKVVSFSE 155 (313)
T ss_dssp ETTCCTTSCC-CEECCC-SSCEEEEEEETTEEEEEET-----TSEEEEEET-TEEEEEEECCSSC----EEEEEEEETTT
T ss_pred EeeecCCCCcccchhhc-ccCEEEEEecCCEEEEEeC-----CCCEEEEcC-CcEEEecccCCCc----eeEEEEccCCC
Confidence 66542 11111111110 1112244446665554443 457888882 2222222221111 1222222 67
Q ss_pred eEEEEEEecCCCEEEEEEecCCceeeEEEEcc-CCceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 266 SLSLLILDNVDHCFKIWVMRKKNWIKQLTVGP-FIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
.+.++... +..+.+|.... ....+.. ......-+.+..++.++....++.+.+||.++++..
T Consensus 156 ~~l~~~~~--d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 156 NKFLTASA--DKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TEEEEEET--TSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEEC--CCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 76666665 67899997332 2233311 222244456667777666666888999999987643
No 87
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=78.62 E-value=39 Score=30.69 Aligned_cols=110 Identities=15% Similarity=0.048 Sum_probs=61.3
Q ss_pred eeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCcee
Q 036621 211 RTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWI 290 (376)
Q Consensus 211 ~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~ 290 (376)
++.++|.....+.. ...|..||+.+.+.... +..+.. ...-...+|.+.++... +..+.+|.+... .
T Consensus 284 ~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~-~~~~~~---~v~~~~~~~~~l~~~~~--dg~i~vwd~~~~--~ 350 (445)
T 2ovr_B 284 SLQFDGIHVVSGSL-----DTSIRVWDVETGNCIHT-LTGHQS---LTSGMELKDNILVSGNA--DSTVKIWDIKTG--Q 350 (445)
T ss_dssp EEEECSSEEEEEET-----TSCEEEEETTTCCEEEE-ECCCCS---CEEEEEEETTEEEEEET--TSCEEEEETTTC--C
T ss_pred EEEECCCEEEEEeC-----CCeEEEEECCCCCEEEE-EcCCcc---cEEEEEEeCCEEEEEeC--CCeEEEEECCCC--c
Confidence 44557766555543 45789999987654322 111111 22223345665555555 678999988663 2
Q ss_pred eEEEEcc-CCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEE
Q 036621 291 KQLTVGP-FIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELR 333 (376)
Q Consensus 291 ~~~~i~~-~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~ 333 (376)
.+..+.. ......+.++.-+++.++. ..++.+.+||.++++..
T Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 351 CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCcee
Confidence 3444411 1121233344444565444 45788999999988654
No 88
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=78.60 E-value=29 Score=29.28 Aligned_cols=137 Identities=12% Similarity=0.033 Sum_probs=81.2
Q ss_pred ceEEEEEcCCCceEeccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTL 260 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l 260 (376)
..+.+++..++.=.....++. .+.. .-...++.+|-+... ...+.+||..+.+- ..++.|.. ...|
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fge--Gi~~~~~~ly~ltw~-----~~~v~v~D~~tl~~~~ti~~~~~-----Gwgl 110 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGA--GIVAWRDRLIQLTWR-----NHEGFVYDLATLTPRARFRYPGE-----GWAL 110 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEE--EEEEETTEEEEEESS-----SSEEEEEETTTTEEEEEEECSSC-----CCEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCccee--EEEEeCCEEEEEEee-----CCEEEEEECCcCcEEEEEeCCCC-----ceEE
Confidence 688999998875433334444 3332 244567799988754 56999999987443 45566532 2455
Q ss_pred EEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCce----eEeE-EEeeCCcEEEEec-CCEEEEEECCCCCE-E
Q 036621 261 GIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGI----FQPL-LFWKKGAFFVESN-SSQLLLYEPGTGEL-R 333 (376)
Q Consensus 261 ~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~----~~~~-~~~~~~~l~~~~~-~~~~~~yd~~~~~~-~ 333 (376)
+.-+++|++... .. .|++++-+.=..+.+| ..... ..+. .-..+|+++.... +..+.+.|+++++. +
T Consensus 111 t~dg~~L~vSdg---s~--~l~~iDp~t~~~~~~I-~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 111 TSDDSHLYMSDG---TA--VIRKLDPDTLQQVGSI-KVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp EECSSCEEEECS---SS--EEEEECTTTCCEEEEE-ECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred eeCCCEEEEECC---CC--eEEEEeCCCCeEEEEE-EEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEE
Confidence 554566777653 33 4677766544555666 33211 1110 0123677776553 56799999999875 4
Q ss_pred EEEE
Q 036621 334 DFEL 337 (376)
Q Consensus 334 ~v~~ 337 (376)
.+..
T Consensus 185 ~idl 188 (243)
T 3mbr_X 185 WIDL 188 (243)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 4443
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=78.09 E-value=35 Score=29.88 Aligned_cols=146 Identities=10% Similarity=0.056 Sum_probs=73.4
Q ss_pred eEEEEEcC--CCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccc-eeee----cC----CCC-
Q 036621 184 LVAVYTLR--TNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEK-FQEI----QG----PCI- 251 (376)
Q Consensus 184 ~~~vyss~--t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~-~~~i----~~----P~~- 251 (376)
.+.+|... ++..+.+...+..-.. ...+.++|...+.... ....|..||+.+.. ...+ .. |..
T Consensus 76 ~v~~~~~~~~~g~~~~~~~~~~~~~~-p~~~~~dg~~l~~~~~----~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 150 (361)
T 3scy_A 76 AVSAFAFDKEKGTLHLLNTQKTMGAD-PCYLTTNGKNIVTANY----SGGSITVFPIGQDGALLPASDVIEFKGSGPDKE 150 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSC-EEEEEECSSEEEEEET----TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTT
T ss_pred cEEEEEEeCCCCcEEEeeEeccCCCC-cEEEEECCCEEEEEEC----CCCEEEEEEeCCCCcCcccceeEEccCCCCCcc
Confidence 55666554 3666655432211111 1233347765555543 24578889986432 2111 11 110
Q ss_pred -CCCCCceEEEEE-CCe-EEEEEEecCCCEEEEEEecCCc-------eeeE---EEEc-cCCceeEeEEEeeCCcE-EEE
Q 036621 252 -LESSLDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRKKN-------WIKQ---LTVG-PFIGIFQPLLFWKKGAF-FVE 316 (376)
Q Consensus 252 -~~~~~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~-------W~~~---~~i~-~~~~~~~~~~~~~~~~l-~~~ 316 (376)
........+... +|+ |++.... ...+.+|.++... .... ..+. +...-..-+.+..+++. ++.
T Consensus 151 ~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 228 (361)
T 3scy_A 151 RQTMPHLHCVRITPDGKYLLADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLI 228 (361)
T ss_dssp TCSSCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred ccCCCcceEEEECCCCCEEEEEeCC--CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEE
Confidence 000011223333 676 4444333 6789999998733 3222 1220 11222344566777874 444
Q ss_pred e-cCCEEEEEECCCCCEEEEE
Q 036621 317 S-NSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 317 ~-~~~~~~~yd~~~~~~~~v~ 336 (376)
. .+..+.+||+++++++.+.
T Consensus 229 ~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 229 NEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp ETTTCEEEEEEEETTEEEEEE
T ss_pred cCCCCeEEEEEecCCceEEeE
Confidence 4 3678999999888776654
No 90
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=78.07 E-value=48 Score=31.50 Aligned_cols=112 Identities=7% Similarity=-0.013 Sum_probs=66.1
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEEC-CeEEEEEEecCCCEEEEEEecC-----C
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIYY-QSLSLLILDNVDHCFKIWVMRK-----K 287 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~~-G~L~~~~~~~~~~~l~iW~l~~-----~ 287 (376)
+|...+.+.. ....|.++|..+.+... ++............+..-+ |.++ +.....+.++.+|-.+. .
T Consensus 334 dg~~l~va~~----~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~-~s~~~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 334 SHRYFMTAAN----NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVW-STSHLGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp TSCEEEEEEG----GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEE-EEEBSSSSEEEEEECCTTTCTTT
T ss_pred CCCEEEEEec----CCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEE-EeccCCCceEEEEEeCCCCCchh
Confidence 5664444433 24578889999876543 2321111111123332224 5554 44433368999999876 3
Q ss_pred ceeeEEEEccCCc-eeEeEEEeeCCcEEEEec--------CCEEEEEECCCCCE
Q 036621 288 NWIKQLTVGPFIG-IFQPLLFWKKGAFFVESN--------SSQLLLYEPGTGEL 332 (376)
Q Consensus 288 ~W~~~~~i~~~~~-~~~~~~~~~~~~l~~~~~--------~~~~~~yd~~~~~~ 332 (376)
.|..+.++ +... -...+.++.++..++... +..+.+||.++.+.
T Consensus 409 ~~~~v~~l-~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 409 AWKKVAEL-QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp BTSEEEEE-ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred cCeEEEEE-EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 49999999 5432 234466677787666543 44799999998764
No 91
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=77.92 E-value=35 Score=30.65 Aligned_cols=70 Identities=10% Similarity=0.104 Sum_probs=47.6
Q ss_pred CeEEEEEEecCC-----CEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCc-EEEEec--CCEEEEEECCCCCEEEE
Q 036621 265 QSLSLLILDNVD-----HCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGA-FFVESN--SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 265 G~L~~~~~~~~~-----~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~~~--~~~~~~yd~~~~~~~~v 335 (376)
++|++....... ..=.||+.+-.....+.+| +......-+.+..+|+ +++..+ +..+.++|.++++...-
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 456666542111 1236888888889999999 7765455567777887 655544 57899999999876543
No 92
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=77.88 E-value=36 Score=29.97 Aligned_cols=63 Identities=11% Similarity=0.256 Sum_probs=35.4
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
+++.....+.+.+||..+++....-.... . ...+.+.+...+-+.+.... .+ ..+.+|+.
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~---~~-------~~v~~~d~ 173 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEE----T------VYSHHMSPVSTKHCLVAVGT---RG-------PKVQLCDL 173 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSS----C------EEEEEECSSCSSCCEEEEEE---SS-------SSEEEEES
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCC----c------eeeeEeecCCCCCcEEEEEc---CC-------CeEEEEeC
Confidence 45555557889999999887655432211 1 23455555443333444322 22 46788888
Q ss_pred CCC
Q 036621 191 RTN 193 (376)
Q Consensus 191 ~t~ 193 (376)
.++
T Consensus 174 ~~~ 176 (408)
T 4a11_B 174 KSG 176 (408)
T ss_dssp SSS
T ss_pred CCc
Confidence 764
No 93
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=77.64 E-value=40 Score=30.37 Aligned_cols=193 Identities=13% Similarity=0.051 Sum_probs=95.5
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|.|.+.+ ...++..+++.++....+-.... .. ..++.+|+..+.. .... . .. ..++
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---~~------p~glavd~~~g~l--Y~~d----~----~~--~~I~ 184 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---ES------PGGLAVDWVHDKL--YWTD----S----GT--SRIE 184 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCCEEEEECSSC---SC------CCCEEEETTTTEE--EEEE----T----TT--TEEE
T ss_pred CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC---CC------ccEEEEEeCCCeE--EEEc----C----CC--CeEE
Confidence 466666665 45678888887765444322111 11 2366667654432 2210 1 01 3566
Q ss_pred EEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE
Q 036621 187 VYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY 263 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~ 263 (376)
+++.....-+.+.. ..... ..++.+ +|.|||.... ....|..+|++...-..+-. .... ....|+..
T Consensus 185 ~~~~dg~~~~~l~~--~~l~~-P~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~-~~~~--~PnGlavd 254 (386)
T 3v65_B 185 VANLDGAHRKVLLW--QSLEK-PRAIALHPMEGTIYWTDWG----NTPRIEASSMDGSGRRIIAD-THLF--WPNGLTID 254 (386)
T ss_dssp ECBTTSCSCEEEEC--SSCSC-EEEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEEC-SSCS--CEEEEEEE
T ss_pred EEeCCCCceEEeec--CCCCC-CcEEEEEcCCCeEEEeccC----CCCEEEEEeCCCCCcEEEEE-CCCC--CeeeEEEe
Confidence 66655433222210 01111 224444 5899998754 23689999998765444421 1111 13445554
Q ss_pred --CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe-eCCcEEEEec-CCEEEEEECCC-CCEEEEEE
Q 036621 264 --YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW-KKGAFFVESN-SSQLLLYEPGT-GELRDFEL 337 (376)
Q Consensus 264 --~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~l~~~~~-~~~~~~yd~~~-~~~~~v~~ 337 (376)
+|+|+++... ...|....++... +...+ . ..+..|.++. .++.+|+... ...+..+|..+ +..+.+..
T Consensus 255 ~~~~~lY~aD~~--~~~I~~~d~dG~~--~~~~~-~-~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 255 YAGRRMYWVDAK--HHVIERANLDGSH--RKAVI-S-QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp GGGTEEEEEETT--TTEEEEECTTSCS--CEEEE-C-SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCEEEEEECC--CCEEEEEeCCCCe--eEEEE-E-CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 6889888764 4444444443311 11112 1 1123454443 3455666554 56799999544 44555543
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=77.30 E-value=40 Score=30.21 Aligned_cols=188 Identities=10% Similarity=-0.002 Sum_probs=91.8
Q ss_pred eEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCC-CCCcccceEEEE
Q 036621 111 IVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKR-DSSCAFSLVAVY 188 (376)
Q Consensus 111 ll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~-~~~~~~~~~~vy 188 (376)
.+++.. ....+.+||+.+++....-... .. ..++.+++..+ +-++.- ...+. .... ..+.+|
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~------~~~~~~~~~g~-~l~~~~---~~~~~~~~~d--g~i~~~ 288 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKI----GL------PRGLLLSKDGK-ELYIAQ---FSASNQESGG--GRLGIY 288 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCC----SE------EEEEEECTTSS-EEEEEE---EESCTTCSCC--EEEEEE
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCC----CC------ceEEEEcCCCC-EEEEEE---CCCCccccCC--CeEEEE
Confidence 443444 4678999999888765432221 11 24566665432 222222 11111 0012 478889
Q ss_pred EcCCCceEeccCCCccccCCcceeEeCc-eEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE-CC
Q 036621 189 TLRTNSWKNLKPIDYTMRLSSERTYFDG-AFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 189 ss~t~~W~~~~~~p~~~~~~~~~v~~~G-~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~-~G 265 (376)
+..++.-......+. ... .-...-+| .+|..... ...|..||+.+.+... ++.... ...+... +|
T Consensus 289 d~~~~~~~~~~~~~~-~~~-~~~~~~~g~~l~~~~~~-----~~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg 356 (433)
T 3bws_A 289 SMDKEKLIDTIGPPG-NKR-HIVSGNTENKIYVSDMC-----CSKIEVYDLKEKKVQKSIPVFDK-----PNTIALSPDG 356 (433)
T ss_dssp ETTTTEEEEEEEEEE-CEE-EEEECSSTTEEEEEETT-----TTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTS
T ss_pred ECCCCcEEeeccCCC-Ccc-eEEECCCCCEEEEEecC-----CCEEEEEECCCCcEEEEecCCCC-----CCeEEEcCCC
Confidence 988764322211111 000 00111245 35554433 4589999998765432 232111 2233333 56
Q ss_pred eEEEEEE-ecC------------CCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ec-CCEEEEEECCC
Q 036621 266 SLSLLIL-DNV------------DHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SN-SSQLLLYEPGT 329 (376)
Q Consensus 266 ~L~~~~~-~~~------------~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~yd~~~ 329 (376)
+..++.. ... +..+.+|.++.. ..+..+ +......-+.+..+++.++. .. ++.+.+|++++
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~--~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD--TVKEFW-EAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT--EEEEEE-ECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCC--cEEEEe-cCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 5444444 211 247888877653 344444 32222344555667765554 33 77899998763
No 95
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=76.55 E-value=33 Score=28.77 Aligned_cols=191 Identities=8% Similarity=0.039 Sum_probs=98.4
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|.+.+.. ....++.+||. ++...+..+.. ... ..++.+|+.. . +... . . .. ..+.
T Consensus 66 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--~~~------~~~i~~~~~g-~--l~v~-~-~-~~-------~~i~ 123 (299)
T 2z2n_A 66 SDGEVWFTENAANKIGRITKK-GIIKEYTLPNP--DSA------PYGITEGPNG-D--IWFT-E-M-NG-------NRIG 123 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECSST--TCC------EEEEEECTTS-C--EEEE-E-T-TT-------TEEE
T ss_pred CCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc--CCC------ceeeEECCCC-C--EEEE-e-c-CC-------ceEE
Confidence 456665554 45789999986 44444332211 111 3567777532 2 2221 1 0 11 3566
Q ss_pred EEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-
Q 036621 187 VYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY- 263 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~- 263 (376)
+|+. ++...... .+..... ..++.+ +|.+|+.... ...|..+|. +.++..+..|..... ...++..
T Consensus 124 ~~d~-~g~~~~~~-~~~~~~~-~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~~--~~~i~~~~ 192 (299)
T 2z2n_A 124 RITD-DGKIREYE-LPNKGSY-PSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPASG--PVGITKGN 192 (299)
T ss_dssp EECT-TCCEEEEE-CSSTTCC-EEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCC--EEEEEECT
T ss_pred EECC-CCCEEEec-CCCCCCC-CceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCCCc--ceeEEECC
Confidence 6666 44444332 1110111 113333 5777765532 458999999 777776655543221 2344443
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCC-ceeEeEEEeeCCcEEEEe-cCCEEEEEECCCCCEEEEEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFI-GIFQPLLFWKKGAFFVES-NSSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~yd~~~~~~~~v~~ 337 (376)
+|+|++.... ...+.+|.. ...... ..+ +.. ....-+++..+|.+++.. .+..+..||+ +++++.+..
T Consensus 193 ~g~l~v~~~~--~~~i~~~~~-~g~~~~-~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~ 262 (299)
T 2z2n_A 193 DDALWFVEII--GNKIGRITT-SGEITE-FKI-PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPI 262 (299)
T ss_dssp TSSEEEEETT--TTEEEEECT-TCCEEE-EEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEEC
T ss_pred CCCEEEEccC--CceEEEECC-CCcEEE-EEC-CCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeC
Confidence 5788776653 456666655 333322 222 211 112334555667877766 4578999999 456655543
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=76.25 E-value=45 Score=33.13 Aligned_cols=98 Identities=11% Similarity=0.069 Sum_probs=61.4
Q ss_pred ceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-C--CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeE
Q 036621 230 SYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-Y--QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPL 305 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~--G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~ 305 (376)
.+.|..+|+.+++...+ .+..+... -..+.-. + |.+.+.+.. +..+.+|.++...|..+..+........-+
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~~--V~~l~~s~~~~~~~l~s~s~--Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSSC--EEEEEECCTTSCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CCcEEEEecCCCCCccceeccCCcCc--eEEEEecCCCCCCEEEEEeC--CCeEEEEECCCCcccccccccCCCCCeEEE
Confidence 45788888876665554 33333221 2233332 3 666666666 788999999998888887773233333445
Q ss_pred EEeeC--CcEEE-EecCCEEEEEECCCCC
Q 036621 306 LFWKK--GAFFV-ESNSSQLLLYEPGTGE 331 (376)
Q Consensus 306 ~~~~~--~~l~~-~~~~~~~~~yd~~~~~ 331 (376)
.+..+ +.+++ ...++.+.+||++++.
T Consensus 106 ~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred EECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 55555 65544 4557889999998873
No 97
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=76.05 E-value=42 Score=29.72 Aligned_cols=185 Identities=8% Similarity=-0.060 Sum_probs=93.7
Q ss_pred eeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 108 YCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 108 ~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
.+|.++.......+.+||..+++....-... ... ...+.+.+... + ++.. . .+ ..+.+
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~---~~~------i~~~~~~~~~~-~-l~~~-~---~d-------~~i~i 273 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGH---HGP------ISVLEFNDTNK-L-LLSA-S---DD-------GTLRI 273 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCC---SSC------EEEEEEETTTT-E-EEEE-E---TT-------SCEEE
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeeccC---CCc------eEEEEECCCCC-E-EEEE-c---CC-------CEEEE
Confidence 4677766666788999999887544321111 111 34666666433 2 2222 1 22 46788
Q ss_pred EEcCCCceE-eccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-C
Q 036621 188 YTLRTNSWK-NLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-Y 264 (376)
Q Consensus 188 yss~t~~W~-~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~ 264 (376)
|+..++.-. .......... .-...-+| ....+. ....|..||+.+.+.... ..... ....+... +
T Consensus 274 ~d~~~~~~~~~~~~~~~~i~--~~~~~~~~-~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~ 341 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGHSQSIV--SASWVGDD-KVISCS-----MDGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQD 341 (425)
T ss_dssp ECSSSBSCSEEECCCSSCEE--EEEEETTT-EEEEEE-----TTSEEEEEETTTTEEEEEEECTTC----CEEEEEECTT
T ss_pred EECCCCccceEecCCCccEE--EEEECCCC-EEEEEe-----CCCcEEEEECCCCcEeEecccCCc----cEEEEEEcCC
Confidence 887654321 1111111000 00112255 333332 245899999977654332 32111 11223333 5
Q ss_pred CeEEEEEEecCCCEEEEEEecCCc------------------eeeEEEEccCC-c--eeEeEEEeeCCcEE-EEecCCEE
Q 036621 265 QSLSLLILDNVDHCFKIWVMRKKN------------------WIKQLTVGPFI-G--IFQPLLFWKKGAFF-VESNSSQL 322 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~~~------------------W~~~~~i~~~~-~--~~~~~~~~~~~~l~-~~~~~~~~ 322 (376)
|++.++... +..+.||.+.... +..+..+ ... . ...-+.+..++..+ ....++.+
T Consensus 342 ~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 342 GQKYAVAFM--DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASY-QSSQDNDYIFDLSWNCAGNKISVAYSLQEG 418 (425)
T ss_dssp SSEEEEEET--TSCEEEEECHHHHC--------------CEECCEEEEE-CCTTCCCCEEEEEECTTSSEEEEEESSSCC
T ss_pred CCEEEEEEC--CCeEEEEECCCCccceeeeecccccccCcccchhhhhh-cCcccCCceEEEEccCCCceEEEEecCceE
Confidence 666666555 6789999987621 2245555 322 1 23345555666654 44556779
Q ss_pred EEEECCC
Q 036621 323 LLYEPGT 329 (376)
Q Consensus 323 ~~yd~~~ 329 (376)
.+||+++
T Consensus 419 ~iw~~~g 425 (425)
T 1r5m_A 419 SVVAIPG 425 (425)
T ss_dssp EEEECCC
T ss_pred EEEeecC
Confidence 9998763
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=76.04 E-value=37 Score=29.13 Aligned_cols=188 Identities=8% Similarity=-0.036 Sum_probs=95.6
Q ss_pred eEEEecCCCeEEEEec-CcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEE
Q 036621 111 IVFIEGLNNRITLWNI-ATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYT 189 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (376)
+|+.....+.+.+||. .+++...+.... .... ...+.+.+ +.+-+..- .+ ..+.+|+
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---~~~~-----v~~l~~~~--~~~l~s~~-----~d-------~~i~iwd 128 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNE---ANLG-----ICRICKYG--DDKLIAAS-----WD-------GLIEVID 128 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCC---CCSC-----EEEEEEET--TTEEEEEE-----TT-------SEEEEEC
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccC---CCCc-----eEEEEeCC--CCEEEEEc-----CC-------CeEEEEc
Confidence 3444556788999999 888776654310 1111 35667776 33333221 22 4677777
Q ss_pred cCCCc-------eEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCc-cc--eeeecCCCCCCCCCceE
Q 036621 190 LRTNS-------WKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMAD-EK--FQEIQGPCILESSLDVT 259 (376)
Q Consensus 190 s~t~~-------W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~-~~--~~~i~~P~~~~~~~~~~ 259 (376)
.++.. .+.+..+.. ...-.++.+.+.-...+. ....|..||+.+ .. ......+.... ...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~~~~~---i~~ 198 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNTKV--KNKIFTMDTNSSRLIVGM-----NNSQVQWFRLPLCEDDNGTIEESGLKYQ---IRD 198 (342)
T ss_dssp HHHHTTBCEEEEESCSSSSSS--CCCEEEEEECSSEEEEEE-----STTEEEEEESSCCTTCCCEEEECSCSSC---EEE
T ss_pred ccccccccccccCCeeeEEee--CCceEEEEecCCcEEEEe-----CCCeEEEEECCccccccceeeecCCCCc---eeE
Confidence 65400 121211111 000112333332222222 245899999987 33 33333222211 233
Q ss_pred EEEE--CCeEEEEEEecCCCEEEEEEecCC--c--eeeEEEEccCCc---------eeEeEEEeeCCcEEE-EecCCEEE
Q 036621 260 LGIY--YQSLSLLILDNVDHCFKIWVMRKK--N--WIKQLTVGPFIG---------IFQPLLFWKKGAFFV-ESNSSQLL 323 (376)
Q Consensus 260 l~~~--~G~L~~~~~~~~~~~l~iW~l~~~--~--W~~~~~i~~~~~---------~~~~~~~~~~~~l~~-~~~~~~~~ 323 (376)
+... +|++.++... +..+.||.++.. . ...+..+..... ...-+++..++.+++ ...++.+.
T Consensus 199 i~~~~~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 276 (342)
T 1yfq_A 199 VALLPKEQEGYACSSI--DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276 (342)
T ss_dssp EEECSGGGCEEEEEET--TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEE
T ss_pred EEECCCCCCEEEEEec--CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEE
Confidence 3444 4666666665 789999998653 1 233333311111 133345555666544 44577899
Q ss_pred EEECCCCCE
Q 036621 324 LYEPGTGEL 332 (376)
Q Consensus 324 ~yd~~~~~~ 332 (376)
+||.++++.
T Consensus 277 vwd~~~~~~ 285 (342)
T 1yfq_A 277 CWNLQTRKK 285 (342)
T ss_dssp EEETTTTEE
T ss_pred EEcCccHhH
Confidence 999998764
No 99
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=75.60 E-value=37 Score=28.88 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=57.2
Q ss_pred ceEEEEEEcCcc--ceeee-cCCCCCCCCCceEEEEE---CCeEEEEEEecCCCEEEEEEecC-------CceeeEEEEc
Q 036621 230 SYVILSFNMADE--KFQEI-QGPCILESSLDVTLGIY---YQSLSLLILDNVDHCFKIWVMRK-------KNWIKQLTVG 296 (376)
Q Consensus 230 ~~~il~fD~~~~--~~~~i-~~P~~~~~~~~~~l~~~---~G~L~~~~~~~~~~~l~iW~l~~-------~~W~~~~~i~ 296 (376)
...|..+|+.++ .+..+ .+..+... -..+.-. +|++.+.... +..+.||.++. ..|..+..+.
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~d~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 32 DQHIKVFKLDKDTSNWELSDSWRAHDSS--IVAIDWASPEYGRIIASASY--DKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp TSEEEEEEECSSSCCEEEEEEEECCSSC--EEEEEECCGGGCSEEEEEET--TSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred CCeEEEEECCCCCCcceecceeccCCCc--EEEEEEcCCCCCCEEEEEcC--CCeEEEEecCCCcccccccCcceeeeec
Confidence 447888887754 22222 22222111 2233333 3676666666 78899999976 4677777773
Q ss_pred cCCceeEeEEEeeC--CcEEE-EecCCEEEEEECCCCC
Q 036621 297 PFIGIFQPLLFWKK--GAFFV-ESNSSQLLLYEPGTGE 331 (376)
Q Consensus 297 ~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~yd~~~~~ 331 (376)
.......-+.+..+ +.+++ ...++.+.+||+++++
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 22332344555555 66544 4557889999988765
No 100
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=75.36 E-value=38 Score=28.98 Aligned_cols=189 Identities=13% Similarity=0.063 Sum_probs=96.9
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
.+.+++.. ....+.+||+.|++....-.... .. . ++.+++..+ + ++.... .+ ..+.+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---~~------~-~~~~s~dg~-~-l~~~~~---~~-------~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY---DF------V-DTAITSDCS-N-VVVTSD---FC-------QTLVQ 66 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC---CE------E-EEEECSSSC-E-EEEEES---TT-------CEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC---Cc------c-eEEEcCCCC-E-EEEEeC---CC-------CeEEE
Confidence 44544443 56789999999998754322211 11 2 566665433 2 222211 11 47888
Q ss_pred EEcCCCce--EeccCCCccccCCc-ceeEeCceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE
Q 036621 188 YTLRTNSW--KNLKPIDYTMRLSS-ERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY 263 (376)
Q Consensus 188 yss~t~~W--~~~~~~p~~~~~~~-~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~ 263 (376)
++..++.- +....-. ... . -.+.-+|...+...... ....|..+|+.+.+... ++.... ...+...
T Consensus 67 ~d~~~~~~~~~~~~~~~--~~~-~~~~~s~dg~~l~~~~~~~--~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~s 136 (331)
T 3u4y_A 67 IETQLEPPKVVAIQEGQ--SSM-ADVDITPDDQFAVTVTGLN--HPFNMQSYSFLKNKFISTIPIPYD-----AVGIAIS 136 (331)
T ss_dssp EECSSSSCEEEEEEECS--SCC-CCEEECTTSSEEEECCCSS--SSCEEEEEETTTTEEEEEEECCTT-----EEEEEEC
T ss_pred EECCCCceeEEecccCC--CCc-cceEECCCCCEEEEecCCC--CcccEEEEECCCCCeEEEEECCCC-----ccceEEC
Confidence 88877653 2111100 000 1 12223565333332210 11289999998766533 333221 2333433
Q ss_pred -CCe-EEEEEEecCCCE-EEEEEecC-Cce-ee-EEEEccCCceeEeEEEeeCCc-EEEEec-CCEEEEEECCCCCE
Q 036621 264 -YQS-LSLLILDNVDHC-FKIWVMRK-KNW-IK-QLTVGPFIGIFQPLLFWKKGA-FFVESN-SSQLLLYEPGTGEL 332 (376)
Q Consensus 264 -~G~-L~~~~~~~~~~~-l~iW~l~~-~~W-~~-~~~i~~~~~~~~~~~~~~~~~-l~~~~~-~~~~~~yd~~~~~~ 332 (376)
+|+ |++.... ... +.+|.++. ..- .. ...+ +......-+.+..+++ +++... +..+.+||+++++.
T Consensus 137 pdg~~l~~~~~~--~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 137 PNGNGLILIDRS--SANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TTSSCEEEEEET--TTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCCEEEEEecC--CCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 666 5555443 455 99999886 221 11 2223 2222234456667777 555543 57899999998774
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=74.31 E-value=43 Score=29.10 Aligned_cols=196 Identities=12% Similarity=0.037 Sum_probs=95.6
Q ss_pred cccceeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCC-CCCeEEEEEEEEecCCCCCCccc
Q 036621 104 FKGLYCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPK-TKDYKVVLILTLWDEKRDSSCAF 182 (376)
Q Consensus 104 ~~~s~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~~~~~ 182 (376)
+.++.+|.+.+........++|..+++...--.... ... ...+.+++. ++++-+..- .+
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~------v~~~~~~~~~~~~~l~s~s-----~d------- 148 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS--ANE------IIYMYGHNEVNTEYFIWAD-----NR------- 148 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC--SSC------EEEEECCC---CCEEEEEE-----TT-------
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCC--CCC------EEEEEcCCCCCCCEEEEEe-----CC-------
Confidence 445566777666655677777777776332111110 111 356666662 233322221 22
Q ss_pred ceEEEEEcCCCceEecc--CCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCC-CCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLK--PIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPC-ILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~--~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~-~~~~~~~~~ 259 (376)
..+.+|+.+++.-.... ....... .-...-+|.+...+.. ...|..||+.+.+-....+.. +.. .-..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~--~~~~~pdg~~lasg~~-----dg~i~iwd~~~~~~~~~~~~~~h~~--~v~~ 219 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYS--SGVLHKDSLLLALYSP-----DGILDVYNLSSPDQASSRFPVDEEA--KIKE 219 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCC--EEEECTTSCEEEEECT-----TSCEEEEESSCTTSCCEECCCCTTS--CEEE
T ss_pred CcEEEEECCCCcEEEEEecCCCCceE--EEEECCCCCEEEEEcC-----CCEEEEEECCCCCCCccEEeccCCC--CEEE
Confidence 47888888876542221 1110110 0011125655554443 458999999887654222322 111 1223
Q ss_pred EEEE-CCeEEEEEEecCCCEEEEEEecCC-c-eeeE----EEEccCCceeEeEEEeeCCcEEEE-ec-CCEEEEEEC--C
Q 036621 260 LGIY-YQSLSLLILDNVDHCFKIWVMRKK-N-WIKQ----LTVGPFIGIFQPLLFWKKGAFFVE-SN-SSQLLLYEP--G 328 (376)
Q Consensus 260 l~~~-~G~L~~~~~~~~~~~l~iW~l~~~-~-W~~~----~~i~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~yd~--~ 328 (376)
+.-. +|...+.... ..+.||-+... . .+.. +.. +.. ...+++..++..++. .. ++.+.+|+. .
T Consensus 220 l~fs~~g~~l~s~~~---~~v~iwd~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 220 VKFADNGYWMVVECD---QTVVCFDLRKDVGTLAYPTYTIPEF-KTG--TVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEECTTSSEEEEEES---SBEEEEETTSSTTCBSSCCCBC------C--CEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEeCCCCEEEEEeC---CeEEEEEcCCCCcceeecccccccc-ccc--ceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 3333 5555444443 38999998771 1 1110 111 111 123666677776665 23 667777776 4
Q ss_pred CCCEEE
Q 036621 329 TGELRD 334 (376)
Q Consensus 329 ~~~~~~ 334 (376)
++.|+.
T Consensus 294 ~~~~~~ 299 (343)
T 3lrv_A 294 TKNWTK 299 (343)
T ss_dssp TCSEEE
T ss_pred ccceEe
Confidence 556776
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=74.27 E-value=42 Score=28.94 Aligned_cols=189 Identities=7% Similarity=0.050 Sum_probs=88.0
Q ss_pred ec-eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CG-IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~G-ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+| +|+.......+.+||..+++...+.... .. ...+.+.+..+. +.+.... .+ ..+.+
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~------v~~~~~~~~~~~-~~l~~~~---~d-------g~i~v 155 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHD----AP------VKTIHWIKAPNY-SCVMTGS---WD-------KTLKF 155 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECS----SC------EEEEEEEECSSC-EEEEEEE---TT-------SEEEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeecccc----Cc------eEEEEEEeCCCC-CEEEEcc---CC-------CcEEE
Confidence 44 3444445678999999998877643211 11 345555222222 2222221 22 47888
Q ss_pred EEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceee--ecCCCCCCCCCceEEEEE-C
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE--IQGPCILESSLDVTLGIY-Y 264 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~--i~~P~~~~~~~~~~l~~~-~ 264 (376)
|+.+++.-...-..+. . ...+...+.....+.. ...+..||+.+..-.. +..+.... ...+... +
T Consensus 156 wd~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 223 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLPE---R-CYCADVIYPMAVVATA-----ERGLIVYQLENQPSEFRRIESPLKHQ---HRCVAIFKD 223 (368)
T ss_dssp ECSSCSSCSEEEECSS---C-EEEEEEETTEEEEEEG-----GGCEEEEECSSSCEEEEECCCSCSSC---EEEEEEEEC
T ss_pred EECCCCcEEEEEecCC---C-ceEEEecCCeeEEEeC-----CCcEEEEEeccccchhhhccccccCC---CceEEEccc
Confidence 8877643111101111 0 1122222223333332 4468888887654332 22222211 1222222 2
Q ss_pred C----eEEEEEEecCCCEEEEEEecCC-ceeeEEEEccCCc------------eeEeEEEeeCCcEEE-EecCCEEEEEE
Q 036621 265 Q----SLSLLILDNVDHCFKIWVMRKK-NWIKQLTVGPFIG------------IFQPLLFWKKGAFFV-ESNSSQLLLYE 326 (376)
Q Consensus 265 G----~L~~~~~~~~~~~l~iW~l~~~-~W~~~~~i~~~~~------------~~~~~~~~~~~~l~~-~~~~~~~~~yd 326 (376)
+ ...++... +..+.||.++.. .-..+..+..... ...-+++..++.+++ ...++.+.+||
T Consensus 224 ~~~~~~~~~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 224 KQNKPTGFALGSI--EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp TTSCEEEEEEEET--TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred CCCCCCeEEEecC--CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEE
Confidence 2 12333334 789999998872 2122222211110 122344455666544 44577899999
Q ss_pred CCCCCE
Q 036621 327 PGTGEL 332 (376)
Q Consensus 327 ~~~~~~ 332 (376)
.++++.
T Consensus 302 ~~~~~~ 307 (368)
T 3mmy_A 302 KDARTK 307 (368)
T ss_dssp TTTTEE
T ss_pred CCCCcE
Confidence 998754
No 103
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=74.03 E-value=41 Score=28.67 Aligned_cols=92 Identities=10% Similarity=0.089 Sum_probs=51.9
Q ss_pred EEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeC
Q 036621 232 VILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKK 310 (376)
Q Consensus 232 ~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 310 (376)
.|..+|+.+.+...+.++..... ...+... +|+..++. ...+.+|-++. ...+..+ +......-+++..+
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~----~~~v~~~d~~~--~~~~~~~-~~~~~~~~~~~s~d 290 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVF--YFSTAVNPAKTRAFGA----YNVLESFDLEK--NASIKRV-PLPHSYYSVNVSTD 290 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSC--EEEEEECTTSSEEEEE----ESEEEEEETTT--TEEEEEE-ECSSCCCEEEECTT
T ss_pred ceEEEeCCCCCceEeecCCCCCc--eeeEEECCCCCEEEEe----CCeEEEEECCC--CcCccee-cCCCceeeEEECCC
Confidence 68899999887654443322211 1223333 55543333 35677777655 3334444 33222233556667
Q ss_pred Cc-EEEEecCCEEEEEECCCCCE
Q 036621 311 GA-FFVESNSSQLLLYEPGTGEL 332 (376)
Q Consensus 311 ~~-l~~~~~~~~~~~yd~~~~~~ 332 (376)
++ +++...++.+.+||+++++.
T Consensus 291 g~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 291 GSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp SCEEEEESBSSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCcEEEEECcCCcE
Confidence 76 45544567899999998764
No 104
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=73.55 E-value=42 Score=28.56 Aligned_cols=186 Identities=13% Similarity=0.066 Sum_probs=87.8
Q ss_pred ceEEEecCCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 110 GIVFIEGLNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 110 Gll~~~~~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
.+|........++++|+.|++.+. ++...... .......+. ++ ++.. .. ..+..|
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~---------~~~~~~~pd-G~--ilvs-----~~-------~~V~~~ 61 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE---------CNSVAATKA-GE--ILFS-----YS-------KGAKMI 61 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCC---------CCEEEECTT-SC--EEEE-----CB-------SEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCC---------CcCeEECCC-CC--EEEe-----CC-------CCEEEE
Confidence 344444467889999998988553 33321100 112223332 22 2221 11 356667
Q ss_pred EcCC-CceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCC--CceEEE-EEC
Q 036621 189 TLRT-NSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESS--LDVTLG-IYY 264 (376)
Q Consensus 189 ss~t-~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~--~~~~l~-~~~ 264 (376)
+... -.|+....-..... ...+.-||.++..... ....++.||.+.+.-..+.+....... ....+. ..+
T Consensus 62 d~~G~~~W~~~~~~~~~~~--~~~~~~dG~~lv~~~~----~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 62 TRDGRELWNIAAPAGCEMQ--TARILPDGNALVAWCG----HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CTTSCEEEEEECCTTCEEE--EEEECTTSCEEEEEES----TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CCCCCEEEEEcCCCCcccc--ccEECCCCCEEEEecC----CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 7621 24665431111111 1234456766655432 145788888866544444332221100 011111 225
Q ss_pred CeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeCCcEEEEec-CCEEEEEECCCCCE
Q 036621 265 QSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGTGEL 332 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~ 332 (376)
|.+.++... ...+..|-.+. ..|+... +. .... ..+..+|.+++... +.+++.+|++|++.
T Consensus 136 G~~lv~~~~--~~~v~~~d~~G~~~w~~~~---~~-~~~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 136 GNYLVPLFA--TSEVREIAPNGQLLNSVKL---SG-TPFS-SAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEEETT--TTEEEEECTTSCEEEEEEC---SS-CCCE-EEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEecC--CCEEEEECCCCCEEEEEEC---CC-Cccc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 665554443 45566665543 4444322 11 1111 23345677766544 55799999996654
No 105
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=73.00 E-value=45 Score=28.71 Aligned_cols=204 Identities=11% Similarity=-0.028 Sum_probs=101.3
Q ss_pred ceeceEEEec-CCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 107 LYCGIVFIEG-LNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 107 s~~Gll~~~~-~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
..+..+.+.. ....+.++|+.|++... ++.......... ......++.+++..+. ++... ...+ ..
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~--l~~~~--~~~~-------~~ 165 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEV-RPLQPRELVADDATNT--VYISG--IGKE-------SV 165 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSC-CCCEEEEEEEETTTTE--EEEEE--ESSS-------CE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccccc-CCCCCceEEECCCCCE--EEEEe--cCCC-------ce
Confidence 3344454443 46799999999988643 333211110000 0001245677765442 22221 1111 46
Q ss_pred EEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE
Q 036621 185 VAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY 263 (376)
Q Consensus 185 ~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~ 263 (376)
+.+|+..++.=...-........ .-.+.-+|...+.... ...|..+|+.+.+.. .+..+..........+...
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMST-GLALDSEGKRLYTTNA-----DGELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCC-CCEEETTTTEEEEECT-----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred EEEEcCCCCceEEEecCCCCccc-eEEECCCCCEEEEEcC-----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 88888876532211110011111 1123336654444433 347889999887654 3354332212122334444
Q ss_pred -CCe-EEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCc-EEEEe-cCCEEEEEECCCCCEEE
Q 036621 264 -YQS-LSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGA-FFVES-NSSQLLLYEPGTGELRD 334 (376)
Q Consensus 264 -~G~-L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~~-~~~~~~~yd~~~~~~~~ 334 (376)
+|+ |++.... ...+.+|-++..+ .+..+ +... ..-+.+..+++ +++.. .++.+.+||.++++...
T Consensus 240 ~dg~~l~~~~~~--~~~v~~~d~~~~~--~~~~~-~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 240 TARQRAFITDSK--AAEVLVVDTRNGN--ILAKV-AAPE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp TTTTEEEEEESS--SSEEEEEETTTCC--EEEEE-ECSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCC--CCEEEEEECCCCc--EEEEE-EcCC-CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 555 5444433 5788888776533 33334 2222 12356667777 55555 36789999999876543
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.78 E-value=55 Score=29.62 Aligned_cols=193 Identities=8% Similarity=0.068 Sum_probs=91.3
Q ss_pred eEEEecCCCeEEEEecCcccc--eec-CCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 111 IVFIEGLNNRITLWNIATRES--ITL-PKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~--~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|+.....+.+.+||..++.. ..+ +.......... ...+.+.+..+.+-+.+- .+ ..+.+
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~~p~~~~~l~s~~-----~d-------g~i~i 258 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAV-----VEDVAWHLLHESLFGSVA-----DD-------QKLMI 258 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSC-----EEEEEECSSCTTEEEEEE-----TT-------SEEEE
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCC-----EeeeEEeCCCCCEEEEEe-----CC-------CeEEE
Confidence 566556678899999987321 111 11111111111 346666664443332222 22 47889
Q ss_pred EEcCCCc-eEeccCCCccccCCcceeEe--Cce-EEEEecccCCCCceEEEEEEcCccc--eeeecCCCCCCCCCceEEE
Q 036621 188 YTLRTNS-WKNLKPIDYTMRLSSERTYF--DGA-FYWLLKLENDNDSYVILSFNMADEK--FQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 188 yss~t~~-W~~~~~~p~~~~~~~~~v~~--~G~-lYwl~~~~~~~~~~~il~fD~~~~~--~~~i~~P~~~~~~~~~~l~ 261 (376)
|+.+++. .+.+..+.. ....-.++.+ +|. ++..+.. ...|..||+.+.. ...+.. +... -..+.
T Consensus 259 ~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~-----dg~v~vwd~~~~~~~~~~~~~--h~~~--v~~i~ 328 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGSA-----DKTVALWDLRNLKLKLHSFES--HKDE--IFQVQ 328 (430)
T ss_dssp EETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEET-----TSEEEEEETTCTTSCSEEEEC--CSSC--EEEEE
T ss_pred EECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEeC-----CCeEEEEeCCCCCCCeEEeec--CCCC--EEEEE
Confidence 9988652 111110000 0000112222 243 4444433 4579999988632 222221 1111 22233
Q ss_pred EE-CC-eEEEEEEecCCCEEEEEEecC-Cc-----------eeeEEEEccCCceeEeEEEeeCCc-EEEE-ecCCEEEEE
Q 036621 262 IY-YQ-SLSLLILDNVDHCFKIWVMRK-KN-----------WIKQLTVGPFIGIFQPLLFWKKGA-FFVE-SNSSQLLLY 325 (376)
Q Consensus 262 ~~-~G-~L~~~~~~~~~~~l~iW~l~~-~~-----------W~~~~~i~~~~~~~~~~~~~~~~~-l~~~-~~~~~~~~y 325 (376)
-. +| .+.+.... +..+.||.+.. .. -.++...........-+.+..++. +++. ..++.+.+|
T Consensus 329 ~sp~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 329 WSPHNETILASSGT--DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp ECSSCTTEEEEEET--TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred ECCCCCCEEEEEeC--CCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 32 35 35555555 67899999876 11 123333311122233455556666 5443 446778888
Q ss_pred ECCCCCE
Q 036621 326 EPGTGEL 332 (376)
Q Consensus 326 d~~~~~~ 332 (376)
++.++.+
T Consensus 407 ~~~~~~~ 413 (430)
T 2xyi_A 407 QMAENVY 413 (430)
T ss_dssp EECHHHH
T ss_pred Ecccccc
Confidence 8876543
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=72.74 E-value=49 Score=29.05 Aligned_cols=192 Identities=11% Similarity=0.119 Sum_probs=90.5
Q ss_pred EEEecCCCeEEEEecCcccceecCCCcc---------CCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCccc
Q 036621 112 VFIEGLNNRITLWNIATRESITLPKYRA---------IIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAF 182 (376)
Q Consensus 112 l~~~~~~~~~~v~NP~T~~~~~LP~~~~---------~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 182 (376)
|+.....+.+.+||..+++......... ..... ....+.+.+..+.+-+..- .+
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~s~~-----~d------- 121 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY-----SVETVQWYPHDTGMFTSSS-----FD------- 121 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS-----CEEEEEECTTCTTCEEEEE-----TT-------
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC-----cEEEEEEccCCCcEEEEEe-----CC-------
Confidence 3333456678999988876544322110 00111 1356666664444333221 22
Q ss_pred ceEEEEEcCCCceEeccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTL 260 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l 260 (376)
..+.+|+..++.-...-..+. ..........-+|.+...+.. ...|..||+.+.+... +.. +.. .-..+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~d~~~~~~~~~~~~--~~~--~v~~~ 192 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR-----GPKVQLCDLKSGSCSHILQG--HRQ--EILAV 192 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES-----SSSEEEEESSSSCCCEEECC--CCS--CEEEE
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC-----CCeEEEEeCCCcceeeeecC--CCC--cEEEE
Confidence 478888887754332221111 000000000113333333332 4478888987664322 221 111 12233
Q ss_pred EEE-CCe-EEEEEEecCCCEEEEEEecCCceeeEEEEc---------------cCCceeEeEEEeeCCcEEE-EecCCEE
Q 036621 261 GIY-YQS-LSLLILDNVDHCFKIWVMRKKNWIKQLTVG---------------PFIGIFQPLLFWKKGAFFV-ESNSSQL 322 (376)
Q Consensus 261 ~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~---------------~~~~~~~~~~~~~~~~l~~-~~~~~~~ 322 (376)
... +|. +.+.... +..+.+|.+....-.. ..+. .......-+.+..++..++ ...++.+
T Consensus 193 ~~~~~~~~ll~~~~~--dg~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 193 SWSPRYDYILATASA--DSRVKLWDVRRASGCL-ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EECSSCTTEEEEEET--TSCEEEEETTCSSCCS-EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EECCCCCcEEEEEcC--CCcEEEEECCCCCccc-ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 333 444 5555555 6789999986611000 1110 0011133345556666544 4457789
Q ss_pred EEEECCCCCE
Q 036621 323 LLYEPGTGEL 332 (376)
Q Consensus 323 ~~yd~~~~~~ 332 (376)
.+||+++++.
T Consensus 270 ~vwd~~~~~~ 279 (408)
T 4a11_B 270 RLWNSSNGEN 279 (408)
T ss_dssp EEEETTTCCB
T ss_pred EEEECCCCcc
Confidence 9999998653
No 108
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=72.61 E-value=43 Score=28.35 Aligned_cols=193 Identities=11% Similarity=0.111 Sum_probs=95.2
Q ss_pred CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceE
Q 036621 117 LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWK 196 (376)
Q Consensus 117 ~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~ 196 (376)
....+.++||.+++...+..+....... ...++.+++..+. +... . .. ..+.+|+.. +..+
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~-----~~~~i~~~~~~g~--l~v~-~---~~-------~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYGG-----IPAGCQCDRDANQ--LFVA-D---MR-------LGLLVVQTD-GTFE 104 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEEC-----CEEEEEECSSSSE--EEEE-E---TT-------TEEEEEETT-SCEE
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCCC-----CCceEEEecCCCc--EEEE-E---CC-------CCEEEEeCC-CCEE
Confidence 4567899999998877654311100111 1356667654232 2222 1 11 357778877 6665
Q ss_pred ec-cCCCc--cccCCcceeEe--CceEEEEecccC----------CCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 197 NL-KPIDY--TMRLSSERTYF--DGAFYWLLKLEN----------DNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 197 ~~-~~~p~--~~~~~~~~v~~--~G~lYwl~~~~~----------~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
.. ..... .... ...+.+ +|.+|+...... ......|..+|.. +++..+.- ... ....++
T Consensus 105 ~~~~~~~~~~~~~~-~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~--~~~~i~ 178 (314)
T 1pjx_A 105 EIAKKDSEGRRMQG-CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQ--FPNGIA 178 (314)
T ss_dssp ECCSBCTTSCBCBC-CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EES--SEEEEE
T ss_pred EEEeccCCCccccC-CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCC--CcceEE
Confidence 54 31111 1111 123333 677776553210 0012589999987 55544310 000 012233
Q ss_pred EE-----CCe-EEEEEEecCCCEEEEEEecC-CceeeEEEEc--cCC--ceeEeEEEeeCCcEEEEe-cCCEEEEEECCC
Q 036621 262 IY-----YQS-LSLLILDNVDHCFKIWVMRK-KNWIKQLTVG--PFI--GIFQPLLFWKKGAFFVES-NSSQLLLYEPGT 329 (376)
Q Consensus 262 ~~-----~G~-L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~--~~~--~~~~~~~~~~~~~l~~~~-~~~~~~~yd~~~ 329 (376)
.. +|+ |++.... ...+.+|.++. ........+. +.. ....-+++..+|.+++.. .++.+..||+++
T Consensus 179 ~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred EecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 33 453 5554433 56777777653 3333222211 211 112334556677887765 467899999995
Q ss_pred CC-EEEEE
Q 036621 330 GE-LRDFE 336 (376)
Q Consensus 330 ~~-~~~v~ 336 (376)
++ .+.+.
T Consensus 257 g~~~~~~~ 264 (314)
T 1pjx_A 257 GQPKMRIR 264 (314)
T ss_dssp BSCSEEEE
T ss_pred CcEeEEEe
Confidence 44 34443
No 109
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=72.12 E-value=46 Score=28.42 Aligned_cols=136 Identities=11% Similarity=0.072 Sum_probs=79.0
Q ss_pred ceEEEEEcCCCceEeccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTL 260 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l 260 (376)
..+.+++..+++=...-.++. .+.. .-...++.+|.+... ...+.+||..+.+- ..++.+.. ...|
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~Fge--Git~~g~~ly~ltw~-----~~~v~v~D~~t~~~~~ti~~~~e-----G~gl 132 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGE--GISDWKDKIVGLTWK-----NGLGFVWNIRNLRQVRSFNYDGE-----GWGL 132 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEE--EEEEETTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC-----CCCE
T ss_pred ceEEEEECCCCcEEEEEecCCcccee--EEEEeCCEEEEEEee-----CCEEEEEECccCcEEEEEECCCC-----ceEE
Confidence 578889998875332223333 3332 134456788888654 56999999987543 45666542 2334
Q ss_pred EEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCc----eeEe--EEEeeCCcEEEEec-CCEEEEEECCCCCEE
Q 036621 261 GIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG----IFQP--LLFWKKGAFFVESN-SSQLLLYEPGTGELR 333 (376)
Q Consensus 261 ~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~----~~~~--~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~ 333 (376)
+.-++.|++... .. .||.++-..=..+.+| +... +..+ +. ..+|.++.... +..+.+.|++|++..
T Consensus 133 t~dg~~L~~SdG---s~--~i~~iDp~T~~v~~~I-~V~~~g~~~~~lNELe-~~~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 133 THNDQYLIMSDG---TP--VLRFLDPESLTPVRTI-TVTAHGEELPELNELE-WVDGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp EECSSCEEECCS---SS--EEEEECTTTCSEEEEE-ECEETTEECCCEEEEE-EETTEEEEEETTSSEEEEECTTTCBEE
T ss_pred ecCCCEEEEECC---CC--eEEEEcCCCCeEEEEE-EeccCCccccccceeE-EECCEEEEEEccCCeEEEEECCCCcEE
Confidence 443455666543 23 4777776555556666 4321 1111 12 23677776654 567999999998754
Q ss_pred -EEEE
Q 036621 334 -DFEL 337 (376)
Q Consensus 334 -~v~~ 337 (376)
.+..
T Consensus 206 ~~Id~ 210 (262)
T 3nol_A 206 GIIDL 210 (262)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 4444
No 110
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=70.95 E-value=52 Score=28.57 Aligned_cols=104 Identities=10% Similarity=0.105 Sum_probs=59.5
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE-ECCeEEEEEEecCCCEEEEEEecCCceeeEE
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI-YYQSLSLLILDNVDHCFKIWVMRKKNWIKQL 293 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~-~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~ 293 (376)
+|.+||.... ...|..+|..+++...+..|.. ...++. -+|++.+.. ...+.+|..+..+...+.
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~~~-----v~~i~~~~dg~l~v~~----~~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHALPFM-----GSALAKISDSKQLIAS----DDGLFLRDTATGVLTLHA 125 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEECSSC-----EEEEEEEETTEEEEEE----TTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEECCCc-----ceEEEEeCCCeEEEEE----CCCEEEEECCCCcEEEEe
Confidence 3789998765 4589999999888777665532 223333 478876654 233555544445554443
Q ss_pred EEccC-Cce--eEeEEEeeCCcEEEEec-------CCEEEEEECCCCCEEEE
Q 036621 294 TVGPF-IGI--FQPLLFWKKGAFFVESN-------SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 294 ~i~~~-~~~--~~~~~~~~~~~l~~~~~-------~~~~~~yd~~~~~~~~v 335 (376)
.. +. ... ..-+.+..+|.+++... ...++.|| +++.+.+
T Consensus 126 ~~-~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 126 EL-ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CS-STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred eC-CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 22 11 111 22344556777776543 24688888 4555544
No 111
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.82 E-value=57 Score=28.98 Aligned_cols=95 Identities=6% Similarity=-0.055 Sum_probs=52.2
Q ss_pred ceEEEEEEcCccce--eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecC-CceeeEEEE------ccCCc
Q 036621 230 SYVILSFNMADEKF--QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTV------GPFIG 300 (376)
Q Consensus 230 ~~~il~fD~~~~~~--~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i------~~~~~ 300 (376)
...|..+|+.+.+- ..+...... ....+...+|++.+.... +..+.+|.+.. ..=..+..+ .....
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLINEGT---PINNVYFAAGALFVSSGF--DTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEESTTS---CEEEEEEETTEEEEEETT--TEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred CCeEEEEEcCCCcCchhhhhccCCC---CceEEEeCCCCEEEEecC--CccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 45899999987543 233221111 123334447875555444 78999999987 221111111 01111
Q ss_pred eeEeEEEeeCCc----EEEEecCCEEEEEECCC
Q 036621 301 IFQPLLFWKKGA----FFVESNSSQLLLYEPGT 329 (376)
Q Consensus 301 ~~~~~~~~~~~~----l~~~~~~~~~~~yd~~~ 329 (376)
...-+++..++. ++....++.+..|+++.
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 133345555555 77777778888998875
No 112
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=70.51 E-value=49 Score=28.08 Aligned_cols=97 Identities=11% Similarity=0.102 Sum_probs=54.8
Q ss_pred ceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE---CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeE
Q 036621 230 SYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY---YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPL 305 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~---~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~ 305 (376)
...|..+|+.++....+ .+..+... -..+.-. +|++.+.... +..+.||.++...|..+..+........-+
T Consensus 30 D~~v~iw~~~~~~~~~~~~l~gH~~~--V~~v~~s~~~~g~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v 105 (297)
T 2pm7_B 30 DKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSY--DGKVMIWKEENGRWSQIAVHAVHSASVNSV 105 (297)
T ss_dssp TSCEEEEEBCSSCBCCCEEECCCSSC--EEEEEECCGGGCSEEEEEET--TTEEEEEEBSSSCBCCCEEECCCSSCEEEE
T ss_pred CCEEEEEecCCCCcEEEEEEccccCC--eEEEEecCCCcCCEEEEEcC--CCEEEEEEcCCCceEEEEEeecCCCceeEE
Confidence 34677888875433222 22222211 1223322 2666665555 789999999887787776662122223334
Q ss_pred EEeeC--CcEEE-EecCCEEEEEECCCC
Q 036621 306 LFWKK--GAFFV-ESNSSQLLLYEPGTG 330 (376)
Q Consensus 306 ~~~~~--~~l~~-~~~~~~~~~yd~~~~ 330 (376)
.+..+ +.+++ ...++.+.+||++++
T Consensus 106 ~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 106 QWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 44443 55444 445778899998865
No 113
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=70.11 E-value=63 Score=29.21 Aligned_cols=187 Identities=9% Similarity=0.086 Sum_probs=92.1
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEec
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNL 198 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (376)
..+.+||..++..+.|..... . ...+.+.|.. + +++... ... .. ..+.+++..++..+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~----~------v~~~~~Spdg-~-~la~~s--~~~----~~--~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ----P------LMSPAWSPDG-S-KLAYVT--FES----GR--SALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS----C------EEEEEECTTS-S-EEEEEE--CTT----SS--CEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC----c------ceeeEEcCCC-C-EEEEEE--ecC----CC--cEEEEEECCCCcEEEe
Confidence 689999997766555532211 1 3455555533 2 233221 111 12 5889999988877655
Q ss_pred cCCCccccCCcceeEeCce-EEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCC
Q 036621 199 KPIDYTMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVD 276 (376)
Q Consensus 199 ~~~p~~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~ 276 (376)
...+.... .....-+|. +++..... ....|..+|+.+.+...+.... .. ...+.-. +|+..++.... .
T Consensus 219 ~~~~~~~~--~~~~spdg~~la~~~~~~---g~~~i~~~d~~~~~~~~l~~~~--~~--~~~~~~spdg~~l~~~s~~-~ 288 (415)
T 2hqs_A 219 ASFPRHNG--APAFSPDGSKLAFALSKT---GSLNLYVMDLASGQIRQVTDGR--SN--NTEPTWFPDSQNLAFTSDQ-A 288 (415)
T ss_dssp ECCSSCEE--EEEECTTSSEEEEEECTT---SSCEEEEEETTTCCEEECCCCS--SC--EEEEEECTTSSEEEEEECT-T
T ss_pred ecCCCccc--CEEEcCCCCEEEEEEecC---CCceEEEEECCCCCEEeCcCCC--Cc--ccceEECCCCCEEEEEECC-C
Confidence 43322000 001112565 55444332 2457999999887765542211 11 1222222 67644444421 2
Q ss_pred CEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcE-EEEecC---CEEEEEECCCCCEEEEE
Q 036621 277 HCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAF-FVESNS---SQLLLYEPGTGELRDFE 336 (376)
Q Consensus 277 ~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l-~~~~~~---~~~~~yd~~~~~~~~v~ 336 (376)
...+||.++-..-. ...+........-..+..+|+. ++...+ ..++.+|+++++.+.+.
T Consensus 289 g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 289 GRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp SSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CCcEEEEEECCCCC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 33455554431111 1222111122223455667764 444332 47999999998876653
No 114
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=69.98 E-value=60 Score=29.47 Aligned_cols=108 Identities=10% Similarity=0.141 Sum_probs=60.6
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCe-EEEEEEecCCCEEEEEEecC-Ccee-
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRK-KNWI- 290 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~-~~W~- 290 (376)
+|.+||.... ...|..+|+.+.+...+...... .. ++.. +|+ |++..... .. .||.++. ..|.
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~~----~~-ia~~~~g~~l~~~d~~~-~~--~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFKG----GK-PAVTKDKQRVYSIGWEG-TH--TVYVYMKASGWAP 207 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETCCB----CB-CEECTTSSEEEEEBSST-TC--EEEEEEGGGTTCE
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccCCC----Cc-eeEecCCCcEEEEecCC-Cc--eEEEEEcCCCcee
Confidence 6899998754 45899999998777665222111 11 3333 444 44433321 22 5666665 4443
Q ss_pred -eEEEEcc-CCceeEeEEEee-CCcEEEEecCCEEEEEECCCCCEEEE
Q 036621 291 -KQLTVGP-FIGIFQPLLFWK-KGAFFVESNSSQLLLYEPGTGELRDF 335 (376)
Q Consensus 291 -~~~~i~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~yd~~~~~~~~v 335 (376)
....+.. ......-+++.. ++.||+...++.++.||++++....+
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 2222211 111123345555 57788765567899999998876655
No 115
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=69.69 E-value=52 Score=28.08 Aligned_cols=183 Identities=10% Similarity=-0.006 Sum_probs=90.8
Q ss_pred eEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCc-eEec
Q 036621 120 RITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNS-WKNL 198 (376)
Q Consensus 120 ~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~-W~~~ 198 (376)
.+.+||+.+++....-+.. .. ..++.++|..+ + ++.... .. . ..+.+|+...+. -...
T Consensus 109 ~i~v~d~~~~~~~~~~~~~----~~------~~~~~~spdg~-~-l~~~~~---~~----~--~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP----YD------AVGIAISPNGN-G-LILIDR---SS----A--NTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EEEEEETTTTEEEEEEECC----TT------EEEEEECTTSS-C-EEEEEE---TT----T--TEEEEEEECTTCCEEEE
T ss_pred cEEEEECCCCCeEEEEECC----CC------ccceEECCCCC-E-EEEEec---CC----C--ceEEEEEECCCCcEeec
Confidence 8999999988765432111 11 24666666543 3 222211 11 1 237777765421 1111
Q ss_pred c--CCCc-cccCCcceeEeCce-EEEEecccCCCCceEEEEEEcCccce-eee-cCCCCCCCCCceEEEEE-CCe-EEEE
Q 036621 199 K--PIDY-TMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMADEKF-QEI-QGPCILESSLDVTLGIY-YQS-LSLL 270 (376)
Q Consensus 199 ~--~~p~-~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~~~~~-~~i-~~P~~~~~~~~~~l~~~-~G~-L~~~ 270 (376)
. .++. .... .-.+.-+|. +|..... ...|..||+.+.+. ..+ .+|.... ...+... +|+ |++.
T Consensus 168 ~~~~~~~~~~~~-~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 168 GQEFISGGTRPF-NITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNAVGTNNL---PGTIVVSRDGSTVYVL 238 (331)
T ss_dssp EEEEECSSSSEE-EEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEEEECSSC---CCCEEECTTSSEEEEE
T ss_pred CCccccCCCCcc-ceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeeeccCCCC---CceEEECCCCCEEEEE
Confidence 0 0011 0000 112223676 4444432 45899999987664 112 2222211 1223333 676 4444
Q ss_pred EEecCCCEEEEEEecCCceeeEEEEccCC----ce----eEeEEEeeCCcEE-EEec-CCEEEEEECCCCCEEEE
Q 036621 271 ILDNVDHCFKIWVMRKKNWIKQLTVGPFI----GI----FQPLLFWKKGAFF-VESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 271 ~~~~~~~~l~iW~l~~~~W~~~~~i~~~~----~~----~~~~~~~~~~~l~-~~~~-~~~~~~yd~~~~~~~~v 335 (376)
... ...+.+|.++..+...+..+ +.. .- ...+++..+++.+ +... ++.+.+||++++....+
T Consensus 239 ~~~--~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 239 TES--TVDVFNFNQLSGTLSFVKSF-GHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp CSS--EEEEEEEETTTTEEEEEEEE-ECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred EcC--CCEEEEEECCCCceeeeccc-ccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 333 55678887776555445554 222 10 1225777777754 4443 45799999998776655
No 116
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=68.42 E-value=51 Score=27.46 Aligned_cols=140 Identities=9% Similarity=-0.059 Sum_probs=70.2
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~ 259 (376)
..+.+|+..++.-+.+.. ..... ..++.+ +|.+||.... ...|..+|+....-..+- +.... ....
T Consensus 58 ~~I~~~~~~g~~~~~~~~--~~~~~-p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~-~~~~~--~P~~ 126 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIR--QDLGS-PEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLF-DTGLV--NPRG 126 (267)
T ss_dssp TEEEEEESSSCCCEEEEC--TTCCC-EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEE-CSSCS--SEEE
T ss_pred CEEEEEecCCCCcEEEEE--CCCCC-ccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEE-ECCCC--CccE
Confidence 467777776543222211 11111 224444 5799998754 458999998765443331 11111 1334
Q ss_pred EEEE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCC-cEEEEec-CCEEEEEECCCCCEEEE
Q 036621 260 LGIY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKG-AFFVESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 260 l~~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~yd~~~~~~~~v 335 (376)
++.. +|.|++.........+....++...=..+... .+. ...-+++..++ .+|+... ...+..+|++++..+.+
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~-~~~-~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-NLG-LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-TCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred EEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC-CCC-CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 5554 57788876532134555444443211111111 111 12334445544 4666554 46899999987654443
No 117
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=68.40 E-value=49 Score=27.27 Aligned_cols=183 Identities=13% Similarity=0.039 Sum_probs=93.9
Q ss_pred CCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCC-CceE
Q 036621 118 NNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRT-NSWK 196 (376)
Q Consensus 118 ~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t-~~W~ 196 (376)
...+++||+.+++...+..... . ...+.+.|.. .+-++ . .+ ..+.+++..+ +...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~----~------v~~~~~spdg-~~l~~-~-----~~-------~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE----L------FEAPNWSPDG-KYLLL-N-----SE-------GLLYRLSLAGDPSPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS----C------CEEEEECTTS-SEEEE-E-----ET-------TEEEEEESSSCCSCE
T ss_pred ceeEEEEeCCCCceeeeccCCc----c------eEeeEECCCC-CEEEE-E-----cC-------CeEEEEeCCCCCCce
Confidence 4678999999988776544321 1 2455555543 32222 1 11 4788899888 7666
Q ss_pred eccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEE-EEEe
Q 036621 197 NLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSL-LILD 273 (376)
Q Consensus 197 ~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~-~~~~ 273 (376)
.+..... ..-. .....-+|.......... .....|..+|..+.+...+..... ...+.-. +|+..+ ....
T Consensus 77 ~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 77 KVDTGFATICNN-DHGISPDGALYAISDKVE-FGKSAIYLLPSTGGTPRLMTKNLP-----SYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp ECCCTTCCCBCS-CCEECTTSSEEEEEECTT-TSSCEEEEEETTCCCCEECCSSSS-----EEEEEECTTSSEEEEEEEE
T ss_pred Eecccccccccc-ceEECCCCCEEEEEEeCC-CCcceEEEEECCCCceEEeecCCC-----ccceEECCCCCEEEEEECC
Confidence 5542211 0000 112222564433333111 025688888888776555532221 1222233 566443 4445
Q ss_pred cCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcE-EEEec---CCEEEEEECCCCCEEEEE
Q 036621 274 NVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAF-FVESN---SSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 274 ~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l-~~~~~---~~~~~~yd~~~~~~~~v~ 336 (376)
...+.||.++. ... ..+........-+.+..+++. ++... ...++.++..++..+.+.
T Consensus 150 --~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 150 --DQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp --TTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred --CCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 57789999865 222 222122222333445566664 44432 245777787777776654
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=67.93 E-value=54 Score=28.42 Aligned_cols=96 Identities=9% Similarity=0.011 Sum_probs=55.7
Q ss_pred ceEEEEEEcCccceeeec-CCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEcc-CCceeEeEE
Q 036621 230 SYVILSFNMADEKFQEIQ-GPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGP-FIGIFQPLL 306 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~-~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~~~~~~~ 306 (376)
...|..+|+.+.+...+. .+.... ...+... +|.+.+.+.. +..+.||-+....-. ...+.. ......-+.
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~---i~~~~~~pdg~~lasg~~--dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVE---YSSGVLHKDSLLLALYSP--DGILDVYNLSSPDQA-SSRFPVDEEAKIKEVK 221 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCC---CCEEEECTTSCEEEEECT--TSCEEEEESSCTTSC-CEECCCCTTSCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEecCCCCc---eEEEEECCCCCEEEEEcC--CCEEEEEECCCCCCC-ccEEeccCCCCEEEEE
Confidence 457889999887664432 222111 1233333 5666666555 789999998773211 022311 122244455
Q ss_pred EeeCCcEEEEecCCEEEEEECCCCC
Q 036621 307 FWKKGAFFVESNSSQLLLYEPGTGE 331 (376)
Q Consensus 307 ~~~~~~l~~~~~~~~~~~yd~~~~~ 331 (376)
+..++..++...++.+.+||+++.+
T Consensus 222 fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 222 FADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp ECTTSSEEEEEESSBEEEEETTSST
T ss_pred EeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 6667777666556689999998764
No 119
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=67.92 E-value=63 Score=28.38 Aligned_cols=187 Identities=6% Similarity=-0.040 Sum_probs=89.0
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|-.++.. ....+.+||..+++....-... ... ...+.+.+..+.+-+..- .+ ..+.
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h---~~~------v~~v~~s~~~~~~~~s~~-----~d-------g~v~ 207 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH---SSE------VNCVAACPGKDTIFLSCG-----ED-------GRIL 207 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTTTEEEEEECCC---SSC------EEEEEECTTCSSCEEEEE-----TT-------SCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC---CCC------EEEEEEccCCCceeeeec-----cC-------CceE
Confidence 355544443 5678999999988765422111 111 345555544333322221 22 3677
Q ss_pred EEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEE
Q 036621 187 VYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGI 262 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~ 262 (376)
+|+.+++.-........ ....-.++.+ ++.+...+.. ...|..+|+.+.+... +...... -..+.-
T Consensus 208 ~wd~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~la~g~~-----d~~i~~wd~~~~~~~~~~~~~~~~----v~~l~~ 277 (357)
T 4g56_B 208 LWDTRKPKPATRIDFCA-SDTIPTSVTWHPEKDDTFACGDE-----TGNVSLVNIKNPDSAQTSAVHSQN----ITGLAY 277 (357)
T ss_dssp ECCTTSSSCBCBCCCTT-CCSCEEEEEECTTSTTEEEEEES-----SSCEEEEESSCGGGCEEECCCSSC----EEEEEE
T ss_pred EEECCCCceeeeeeecc-ccccccchhhhhcccceEEEeec-----ccceeEEECCCCcEeEEEecccee----EEEEEE
Confidence 77776643221111100 0000112222 2333333322 4468889987765322 2222111 223333
Q ss_pred E-CC-eEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEee-CCcEEEE-ecCCEEEEEECCCC
Q 036621 263 Y-YQ-SLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWK-KGAFFVE-SNSSQLLLYEPGTG 330 (376)
Q Consensus 263 ~-~G-~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~-~~~~~~~~yd~~~~ 330 (376)
. +| ++.+.... +..+.||-++.. ..+..+ .......-+++.. ++.+++. ..++.+.+||+.+.
T Consensus 278 sp~~~~~lasgs~--D~~i~iwd~~~~--~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 278 SYHSSPFLASISE--DCTVAVLDADFS--EVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CSSSSCCEEEEET--TSCEEEECTTSC--EEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred cCCCCCEEEEEeC--CCEEEEEECCCC--cEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 3 45 44444444 678999977653 223333 2222234455553 5666554 45788999998653
No 120
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=67.79 E-value=22 Score=35.32 Aligned_cols=135 Identities=12% Similarity=-0.011 Sum_probs=65.3
Q ss_pred eEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEE
Q 036621 184 LVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTL 260 (376)
Q Consensus 184 ~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l 260 (376)
.+.+++..+..-+.+... .... ..++.+ +|.|||.... ....|..+|+....-..+-.. ... ....|
T Consensus 476 ~I~v~d~dg~~~~~l~~~--~~~~-P~giavDp~~g~ly~td~~----~~~~I~~~~~dG~~~~~l~~~-~l~--~PnGl 545 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFRE--QGSK-PRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTE-NIQ--WPNGI 545 (699)
T ss_dssp CEEEEBSSSCCEEEECCC--SSCC-CCCEECCSSSSCCEECCCS----SSCCEEBCCSSSCCCCEESCS-SCS--SCCCE
T ss_pred eEEEEecCCCceEEEEeC--CCCC-cceEEEccCCCcEEEcccC----CCCeEEEEeCCCCCeeEEEeC-CCC--CccEE
Confidence 566666655433332211 0111 224444 6899997643 235788888876544333110 111 12234
Q ss_pred EEE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccC-CceeEeEEEeeC-CcEEEEec-CCEEEEEECCCCCEE
Q 036621 261 GIY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPF-IGIFQPLLFWKK-GAFFVESN-SSQLLLYEPGTGELR 333 (376)
Q Consensus 261 ~~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~-~~~~~~~~~~~~-~~l~~~~~-~~~~~~yd~~~~~~~ 333 (376)
+.. +|+|+++... ...|...-++... ...+... ..+..|.++.-+ +.||+... ...|..+|+.+++..
T Consensus 546 avd~~~~~LY~aD~~--~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 546 TLDLLSGRLYWVDSK--LHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp EECTTTCCEEEEETT--TTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEE
T ss_pred EEeccCCEEEEEecC--CCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCce
Confidence 443 5778887764 4555444443311 1112011 122334444333 34555543 467999998776543
No 121
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=67.75 E-value=66 Score=28.48 Aligned_cols=71 Identities=13% Similarity=0.186 Sum_probs=47.0
Q ss_pred CeEEEEEE-ecC-----CCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEEEEEE
Q 036621 265 QSLSLLIL-DNV-----DHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 265 G~L~~~~~-~~~-----~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~~v~~ 337 (376)
+++++... ... ...-.||+.+-.....+.++ +... ..-+.+..+|+.++..+...+.+||.++++++.+..
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i-~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI-PGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE-ECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE-ecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEE
Confidence 56776654 211 12335666655566788888 7666 556677788886666555779999999986666654
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=67.64 E-value=73 Score=28.94 Aligned_cols=196 Identities=7% Similarity=0.006 Sum_probs=96.7
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
.|+.......+++|+..+++....+.......... ...+.+.+..+.-+.+.... .+ ..+.+|+.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~sp~~~~~~~l~s~~---~d-------~~i~vwd~ 227 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSM-----LTDVHLIKDSDGHQFIITSD---RD-------EHIKISHY 227 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSC-----EEEEEEEECTTSCEEEEEEE---TT-------SCEEEEEE
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCc-----eEEEEEcCCCCCCcEEEEEc---CC-------CcEEEEEC
Confidence 33333455778888877766543111111111111 34556655411122333322 22 47888888
Q ss_pred CCCceEec--cCCCccccCCcceeEe-CceEEEEecccCCCCceEEEEEEcCcccee-eecCCCC---------------
Q 036621 191 RTNSWKNL--KPIDYTMRLSSERTYF-DGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCI--------------- 251 (376)
Q Consensus 191 ~t~~W~~~--~~~p~~~~~~~~~v~~-~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~--------------- 251 (376)
.++.-... ....... .++.+ +|.+...+.. ...|..+|+.+.+.. .+.....
T Consensus 228 ~~~~~~~~~~~~h~~~v----~~~~~sd~~~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFV----SSICCGKDYLLLSAGG-----DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp SCTTCEEEECCCCSSCE----EEEEECSTTEEEEEES-----SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----
T ss_pred CCCceeeeeecCCCCce----EEEEECCCCEEEEEeC-----CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccc
Confidence 76543221 1111111 12222 6665555543 458999998876542 2332110
Q ss_pred ------CCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEe--cC-CceeeEEEEccCCceeEeEEEeeCCcEEEEecCC-
Q 036621 252 ------LESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVM--RK-KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSS- 320 (376)
Q Consensus 252 ------~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l--~~-~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~- 320 (376)
........+... +|+..++... ....+.||.+ .. ..+..+..+ .......-+++.. +.+++.....
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-~d~~i~iw~~~~~~~~~l~~~~~~-~~~~~v~~~~~~~-~~~~v~~~~~~ 375 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLPFVAFFVE-ATKCIIILEMSEKQKGDLALKQII-TFPYNVISLSAHN-DEFQVTLDNKE 375 (450)
T ss_dssp ------CBCCCEEEEEECSSSSEEEEEET-TCSEEEEEEECSSSTTCEEEEEEE-ECSSCEEEEEEET-TEEEEEECCTT
T ss_pred cccccccceEEEEEEEEeCCCCEEEEEEC-CCCeEEEEEeccCCCCceeeccEe-ccCCceEEEEecC-CcEEEEEeccc
Confidence 000001223333 4665555551 2789999999 33 667777777 4443233344444 4555544321
Q ss_pred ---------EEEEEECCCCCEE
Q 036621 321 ---------QLLLYEPGTGELR 333 (376)
Q Consensus 321 ---------~~~~yd~~~~~~~ 333 (376)
.++.++.++++|+
T Consensus 376 ~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 376 SSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CCSSCCCSEEEEEEETTTTEEE
T ss_pred CCCCCCcceEEEEEEcCCCeEE
Confidence 7888899988886
No 123
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=67.62 E-value=1e+02 Score=30.61 Aligned_cols=143 Identities=8% Similarity=-0.015 Sum_probs=74.3
Q ss_pred ceEEEEEcCCCceEeccCCCc--cccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCce
Q 036621 183 SLVAVYTLRTNSWKNLKPIDY--TMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDV 258 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~--~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 258 (376)
..+..|+..++.|+.....+. .....-.++.. +|.+ |++.. ...+..||..++++..+..+.........
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~-----~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTF-----GGGVGIYTPDMQLVRKFNQYEGFCSNTIN 542 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEES-----SSCEEEECTTCCEEEEECTTTTCSCSCEE
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEc-----CCCEEEEeCCCCeEEEccCCCCCCCCeeE
Confidence 367788888888876542221 10110112322 4554 66543 23688999999999887544433322233
Q ss_pred EEEEE-CCeEEEEEEecCCCEE-EEEEecCCceeeEEEEccCCc-eeEeEEEeeCCcEEEEecCCEEEEEECCCCCEEEE
Q 036621 259 TLGIY-YQSLSLLILDNVDHCF-KIWVMRKKNWIKQLTVGPFIG-IFQPLLFWKKGAFFVESNSSQLLLYEPGTGELRDF 335 (376)
Q Consensus 259 ~l~~~-~G~L~~~~~~~~~~~l-~iW~l~~~~W~~~~~i~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~~v 335 (376)
.+.+. +|.|.+.+.. .+ ..+..+...+.....-+-+.. ...-+....+|.|.+.. ...+..||+++++++.+
T Consensus 543 ~i~~d~~g~lWi~T~~----Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 543 QIYRSSKGQMWLATGE----GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTGISCYITSKKCFYTY 617 (781)
T ss_dssp EEEECTTSCEEEEETT----EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSCEEEEETTTTEEEEE
T ss_pred EEEECCCCCEEEEECC----CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCceEEEECCCCceEEe
Confidence 44443 6777766542 22 222222233322211100111 12223334567777765 45699999999988776
Q ss_pred E
Q 036621 336 E 336 (376)
Q Consensus 336 ~ 336 (376)
.
T Consensus 618 ~ 618 (781)
T 3v9f_A 618 D 618 (781)
T ss_dssp C
T ss_pred c
Confidence 4
No 124
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=67.53 E-value=68 Score=28.56 Aligned_cols=99 Identities=12% Similarity=0.060 Sum_probs=57.0
Q ss_pred ceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEE
Q 036621 230 SYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLF 307 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (376)
...|..||+.+.+... +..+.. ...+.-. +|+..++.....+..+.||.+..........+........-+.+
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQ-----VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSC-----EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCc-----EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEE
Confidence 4578888887665432 232111 1223322 56655554422378999999988777776665222222333555
Q ss_pred eeCCcEEEEe-cCCEEEEEECCCCCEE
Q 036621 308 WKKGAFFVES-NSSQLLLYEPGTGELR 333 (376)
Q Consensus 308 ~~~~~l~~~~-~~~~~~~yd~~~~~~~ 333 (376)
..++..++.. .++.+.+||+.+++..
T Consensus 358 s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 358 SPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp CTTSSEEEEECTTSEEEEEECCC----
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 6677765544 4788999999987643
No 125
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=67.22 E-value=26 Score=31.42 Aligned_cols=179 Identities=13% Similarity=0.070 Sum_probs=75.8
Q ss_pred eeceEEEecCCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEGLNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|.|.+......++.+|+.|++.+. ++. . ...... . ..+ + +++.... .+ -.+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~-~~~s~p-----~---~~~---g--~~~v~~s---~d-------g~l~ 62 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D-PVLQVP-----T---HVE---E--PAFLPDP---ND-------GSLY 62 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C-CSCCCC------------------CCEEECT---TT-------CCEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C-Cceecc-----e---EcC---C--CEEEEeC---CC-------CEEE
Confidence 46777777767789999999988553 222 1 000000 0 001 1 1222100 11 2455
Q ss_pred EEEcCC--CceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE
Q 036621 187 VYTLRT--NSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY 263 (376)
Q Consensus 187 vyss~t--~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~ 263 (376)
.++..+ ..|+.....+..... ...+..+|.+|.-.. ...+.++|..+.+-.. +..+... ...-.
T Consensus 63 a~d~~tG~~~w~~~~~~~~~~~~-sp~~~~~~~v~~g~~------dg~v~a~D~~tG~~~w~~~~~~~~------~~~p~ 129 (369)
T 2hz6_A 63 TLGSKNNEGLTKLPFTIPELVQA-SPCRSSDGILYMGKK------QDIWYVIDLLTGEKQQTLSSAFAD------SLSPS 129 (369)
T ss_dssp EC-----CCSEECSCCHHHHHTT-CSCC-----CCCCEE------EEEEEEECCC-------------------------
T ss_pred EEECCCCceeeeeeccCcccccc-CceEecCCEEEEEeC------CCEEEEEECCCCcEEEEecCCCcc------ccccc
Confidence 666543 457643222221111 112225777775432 4579999988654321 1222111 11113
Q ss_pred CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEee----CCcEEEEecCCEEEEEECCCCCEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWK----KGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
++.|++... +..+..|-.+. ..|+....- . ....+.. ++.+++...++.++++|.++++..
T Consensus 130 ~~~v~~~~~---dg~v~a~d~~tG~~~W~~~~~~-~-----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 130 TSLLYLGRT---EYTITMYDTKTRELRWNATYFD-Y-----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp ---EEEEEE---EEEEECCCSSSSSCCCEEEEEE-E-----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred CCEEEEEec---CCEEEEEECCCCCEEEeEeccc-c-----cCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 444544433 34566666554 568764321 0 0111112 255777677888999999988743
No 126
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=66.84 E-value=59 Score=27.57 Aligned_cols=184 Identities=12% Similarity=0.181 Sum_probs=94.4
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
+|+.......+.+||..+++.......... ... ...+.+.+. +++ +.... .+ ..+.+|+.
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~------i~~~~~~~~-~~~--l~~~~---~d-------g~v~~~d~ 170 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSS-APA------CYALAISPD-SKV--CFSCC---SD-------GNIAVWDL 170 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECS-SSC------EEEEEECTT-SSE--EEEEE---TT-------SCEEEEET
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccC-CCc------eEEEEECCC-CCE--EEEEe---CC-------CcEEEEeC
Confidence 344444567899999988764332211111 111 345666553 222 22211 22 46888888
Q ss_pred CCCceEec-cCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE-CC
Q 036621 191 RTNSWKNL-KPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 191 ~t~~W~~~-~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~-~G 265 (376)
+++.-... ...... -..+.+ +|.....+.. ...|..||+.+.+-.. +..+.. ...+... +|
T Consensus 171 ~~~~~~~~~~~~~~~----i~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~~~~~~~~~~~~~-----v~~~~~s~~~ 236 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDG----ASCIDISNDGTKLWTGGL-----DNTVRSWDLREGRQLQQHDFTSQ-----IFSLGYCPTG 236 (337)
T ss_dssp TTTEEEEEECCCSSC----EEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECSSC-----EEEEEECTTS
T ss_pred CCCceeeeeecccCc----eEEEEECCCCCEEEEEec-----CCcEEEEECCCCceEeeecCCCc-----eEEEEECCCC
Confidence 77643221 111110 112222 5554444433 4588999988765432 232211 1223332 56
Q ss_pred eEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEE
Q 036621 266 SLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELR 333 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~ 333 (376)
+..++... +..+.+|.+.... ...+........-+.+..++++++. ..++.+.+||.++++..
T Consensus 237 ~~l~~~~~--~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 237 EWLAVGME--SSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SEEEEEET--TSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEcC--CCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 66666655 6789999988732 1222122222344555666775544 45788999999998765
No 127
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=66.81 E-value=1e+02 Score=30.36 Aligned_cols=186 Identities=14% Similarity=0.157 Sum_probs=94.7
Q ss_pred ceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEE
Q 036621 110 GIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYT 189 (376)
Q Consensus 110 Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (376)
.+|......+.+.|||..+++....-... ... ...+.+.+.. .+ ++ ... .+ ..+.+|+
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~------v~~~~~s~~~-~~-l~-~~~---~d-------g~i~vw~ 125 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAH---PDY------IRSIAVHPTK-PY-VL-SGS---DD-------LTVKLWN 125 (814)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECC---SSC------EEEEEECSSS-SE-EE-EEE---TT-------SEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEecC---CCC------EEEEEEeCCC-CE-EE-EEc---CC-------CEEEEEE
Confidence 34444456789999999988765422111 111 3455555532 22 22 211 22 4788888
Q ss_pred cCCC-ceEecc-CCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE
Q 036621 190 LRTN-SWKNLK-PIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY 263 (376)
Q Consensus 190 s~t~-~W~~~~-~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~ 263 (376)
..++ .....- ..... -.++.+ +|.....+.. ...|..+|+.+.+-... ..+.... ...+.-.
T Consensus 126 ~~~~~~~~~~~~~~~~~----v~~~~~~p~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~~~---v~~~~~~ 193 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHF----VMCVAFNPKDPSTFASGCL-----DRTVKVWSLGQSTPNFTLTTGQERG---VNYVDYY 193 (814)
T ss_dssp GGGTSEEEEEEECCSSC----EEEEEEETTEEEEEEEEET-----TSEEEEEETTCSSCSEEEECCCTTC---CCEEEEC
T ss_pred CCCCceEEEEEcCCCCc----EEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCcceeEEecCCCCC---EEEEEEE
Confidence 8765 221111 11110 112222 4544444433 45889999876543322 2221111 1222222
Q ss_pred ---CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEe-cCCEEEEEECCCCCEE
Q 036621 264 ---YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVES-NSSQLLLYEPGTGELR 333 (376)
Q Consensus 264 ---~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~yd~~~~~~~ 333 (376)
+|.+.++... +..+.+|.+.... .+..+.........+.+..++.+++.. .++.+.+||..+++..
T Consensus 194 ~~~~~~~l~~~~~--dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 194 PLPDKPYMITASD--DLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp CSTTCCEEEEECT--TSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred ECCCCCEEEEEeC--CCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 5665555555 6789999886632 233331122223445556667655544 4678999999886543
No 128
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=66.45 E-value=60 Score=27.58 Aligned_cols=101 Identities=9% Similarity=0.004 Sum_probs=60.3
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEE
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQL 293 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~ 293 (376)
+|.+||.... ...|..||+.+.+...+..|.. ...++.. +|+|.+.. ...+.+|..+...++.+.
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~~~-----~~~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMDAP-----VSSVALRQSGGYVATI----GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEECSSC-----EEEEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeCCCc-----eEEEEECCCCCEEEEE----CCeEEEEECCCCcEEEEE
Confidence 4799998765 4589999999887776665532 2234443 67765543 345666655556666555
Q ss_pred EEccCCceeEe--EEEeeCCcEEEEec------------CCEEEEEECCC
Q 036621 294 TVGPFIGIFQP--LLFWKKGAFFVESN------------SSQLLLYEPGT 329 (376)
Q Consensus 294 ~i~~~~~~~~~--~~~~~~~~l~~~~~------------~~~~~~yd~~~ 329 (376)
..........+ +.+..+|.+++... ...++.+|++.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 44111112223 44456778777542 23688888864
No 129
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=66.09 E-value=1.1e+02 Score=30.64 Aligned_cols=134 Identities=10% Similarity=-0.033 Sum_probs=73.5
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~ 259 (376)
..++++++....-+.+.. ..... ..++.+ +|.|||.... ....|..+++....-..+-. .... ....
T Consensus 493 ~~I~v~~ldG~~~~~l~~--~~l~~-P~gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~~~~lv~-~~l~--~P~G 562 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFR--ENGSK-PRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVT-ENIQ--WPNG 562 (791)
T ss_dssp TEEEEEETTSSSEEEEEE--CTTCC-EEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEEC-SSCS--CEEE
T ss_pred CeEEEEeCCCCeEEEEEe--CCCCC-cceEEEecCCCCEEEecCC----CCCeEEEEecCCCceEEEEe-CCCC--CceE
Confidence 477888877655444421 01111 225555 5899998743 23589999998766554421 1111 1344
Q ss_pred EEEE--CCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeCC-cEEEEec-CCEEEEEECCCCC
Q 036621 260 LGIY--YQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKKG-AFFVESN-SSQLLLYEPGTGE 331 (376)
Q Consensus 260 l~~~--~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~yd~~~~~ 331 (376)
|+.- +|+||++... ...|..--++. .....+. ....+..|+++...+ .||+... ...|..+|..+++
T Consensus 563 LavD~~~~~LYwaD~~--~~~I~~~d~dG~~~~~v~~---~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSK--LHSISSIDVNGGNRKTILE---DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEEE---CTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEecCCCeEEEEeCC--CCcEEEEecCCCceEEEec---CCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 5554 7889998764 45444444443 3332221 112234556665444 4565543 4679999977664
No 130
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=66.02 E-value=75 Score=28.53 Aligned_cols=188 Identities=9% Similarity=-0.017 Sum_probs=94.6
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
.+.|++... ..+...++.++....+-... .. ..++.+|+..+...+.-+ .. ..+..+
T Consensus 87 ~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~----~~------~~gl~~d~~~~~ly~~D~-----~~-------~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFANR-IDIRQVLPHRSEYTLLLNNL----EN------AIALDFHHRRELVFWSDV-----TL-------DRILRA 143 (386)
T ss_dssp CCEEEEECB-SCEEEECTTSCCCEEEECSC----SC------EEEEEEETTTTEEEEEET-----TT-------TEEEEE
T ss_pred cceeEeecC-ccceeeccCCCcEEEEecCC----Cc------cEEEEEecCCCeEEEEeC-----CC-------CcEEEE
Confidence 455555443 45666676665544332211 11 468888876553222211 11 467777
Q ss_pred EcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE--
Q 036621 189 TLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-- 263 (376)
Q Consensus 189 ss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-- 263 (376)
+..++..+.+.... ... ..++.+ +|.|||.... ...|..+|++...-..+. ..... ....+++.
T Consensus 144 ~~~g~~~~~~~~~~--~~~-p~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~-~~~l~--~P~giavdp~ 212 (386)
T 3v65_B 144 NLNGSNVEEVVSTG--LES-PGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLL-WQSLE--KPRAIALHPM 212 (386)
T ss_dssp ETTSCCEEEEECSS--CSC-CCCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEEE-CSSCS--CEEEEEEETT
T ss_pred ecCCCCcEEEEeCC--CCC-ccEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEee-cCCCC--CCcEEEEEcC
Confidence 77766554432110 111 113333 6899998764 458999998765544332 11111 13445554
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEe--EEEe-eCCcEEEEec-CCEEEEEECCCCCEEEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQP--LLFW-KKGAFFVESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~--~~~~-~~~~l~~~~~-~~~~~~yd~~~~~~~~v 335 (376)
+|.|++..... ...|....++.. -. ...+ . ..+..| +++. .++.||+... ...+..+|+.+...+.+
T Consensus 213 ~g~ly~td~~~-~~~I~r~~~dG~-~~-~~~~-~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 213 EGTIYWTDWGN-TPRIEASSMDGS-GR-RIIA-D-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp TTEEEEEECSS-SCEEEEEETTSC-SC-EEEE-C-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred CCeEEEeccCC-CCEEEEEeCCCC-Cc-EEEE-E-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 67788776531 244433333331 11 1111 1 122334 4444 3456766654 46799999887655444
No 131
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=65.47 E-value=31 Score=29.61 Aligned_cols=109 Identities=8% Similarity=0.015 Sum_probs=60.1
Q ss_pred Cce-EEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeE
Q 036621 215 DGA-FYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQ 292 (376)
Q Consensus 215 ~G~-lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~ 292 (376)
+|. +||.... ...|..+|.. ++.+.+..|... ...+... +|+|.++... ...+.+|..+ .+.+.+
T Consensus 55 ~g~~l~~~d~~-----~~~i~~~~~~-g~~~~~~~~~~~----~~gl~~d~dG~l~v~~~~--~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 55 AQRTLVWSDLV-----GRRVLGWRED-GTVDVLLDATAF----TNGNAVDAQQRLVHCEHG--RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GGTEEEEEETT-----TTEEEEEETT-SCEEEEEESCSC----EEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEE
T ss_pred CCCEEEEEECC-----CCEEEEEeCC-CCEEEEeCCCCc----cceeeECCCCCEEEEECC--CCEEEEECCC-CCEEEE
Confidence 454 8998765 4578899984 445555444322 2333333 6887665443 3556555543 333332
Q ss_pred EEEccCCce--eEeEEEeeCCcEEEEe------------------cCCEEEEEECCCCCEEEEE
Q 036621 293 LTVGPFIGI--FQPLLFWKKGAFFVES------------------NSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 293 ~~i~~~~~~--~~~~~~~~~~~l~~~~------------------~~~~~~~yd~~~~~~~~v~ 336 (376)
......... ..-+.+..+|.+++.. ....++.||+++++++.+.
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 211011111 1225566778888742 1246999999888877654
No 132
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=65.12 E-value=1.1e+02 Score=30.26 Aligned_cols=198 Identities=14% Similarity=0.051 Sum_probs=100.1
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCc-----cCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccc
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYR-----AIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFS 183 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~-----~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 183 (376)
+|-|-+......+..+||.++.+..+...+ ....... ..++..|.... +.++. .. .
T Consensus 323 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----v~~i~~d~~g~----lWigt---~~-------~ 383 (781)
T 3v9f_A 323 FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKV-----VSSVCDDGQGK----LWIGT---DG-------G 383 (781)
T ss_dssp SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSC-----EEEEEECTTSC----EEEEE---BS-------S
T ss_pred CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcc-----eEEEEEcCCCC----EEEEe---CC-------C
Confidence 344433333456888899888777664321 1111111 34555554321 33322 11 2
Q ss_pred eEEEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 184 LVAVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 184 ~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
.+..|+..++.++............-.+++. +|.+ |++.. ...|..||..++++..+..+ .........+.
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~-----~~Gl~~~~~~~~~~~~~~~~-~~~~~~v~~i~ 456 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTY-----LGNISYYNTRLKKFQIIELE-KNELLDVRVFY 456 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEET-----TEEEEEECSSSCEEEECCST-TTCCCCEEEEE
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEec-----cCCEEEEcCCCCcEEEeccC-CCCCCeEEEEE
Confidence 4566676665555432100000010113333 4554 55543 35899999999999887543 11111233444
Q ss_pred EE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccC---CceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEEEEE
Q 036621 262 IY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPF---IGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 262 ~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~~v~ 336 (376)
+. +|.|.+... ..+.++..+...|......... .....-+....+|.+.+...++.++.||+++++++.+.
T Consensus 457 ~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 457 EDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp ECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred ECCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 44 577776543 3444444444667665433100 11123334455677877766567999999998887653
No 133
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=64.39 E-value=75 Score=27.95 Aligned_cols=96 Identities=15% Similarity=0.080 Sum_probs=53.0
Q ss_pred ceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEE
Q 036621 230 SYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLF 307 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (376)
...|..||+.+.+.... .... . ....+... +|++.++... +..+.+|.+.... .+..+........-+.+
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~~--~--~i~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~ 297 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGHH--G--PISVLEFNDTNKLLLSASD--DGTLRIWHGGNGN--SQNCFYGHSQSIVSASW 297 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCCS--S--CEEEEEEETTTTEEEEEET--TSCEEEECSSSBS--CSEEECCCSSCEEEEEE
T ss_pred CCeEEEEEcCCCceeeeeccCC--C--ceEEEEECCCCCEEEEEcC--CCEEEEEECCCCc--cceEecCCCccEEEEEE
Confidence 45789999987644322 2111 1 12233333 5665555555 6789999887622 22223112222333444
Q ss_pred eeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 308 WKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 308 ~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
..++.++....++.+.+||+++++..
T Consensus 298 ~~~~~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 298 VGDDKVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp ETTTEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcEe
Confidence 55564444455788999999887644
No 134
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=64.10 E-value=96 Score=29.10 Aligned_cols=135 Identities=7% Similarity=-0.046 Sum_probs=69.9
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCC-CCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPC-ILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~-~~~~~~~~~ 259 (376)
..+.+|+..++.... ..+...... -..+.+ +|.+...+.. ...|..||+.+.+-.. .+.. +... -..
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~~~~-v~~~~~s~~g~~l~~~~~-----dg~i~iw~~~~~~~~~-~~~~~h~~~--v~~ 536 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPLRAK-PSYISISPSETYIAAGDV-----MGKILLYDLQSREVKT-SRWAFRTSK--INA 536 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCCSSC-EEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEE-CCSCCCSSC--EEE
T ss_pred CeEEEEECCCccccc-cccCCccCc-eEEEEECCCCCEEEEcCC-----CCeEEEeeCCCCccee-EeecCCCCc--eeE
Confidence 468888887765532 111110000 112222 5655554443 4578889997765432 2222 2111 222
Q ss_pred EEEE-----------CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECC
Q 036621 260 LGIY-----------YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPG 328 (376)
Q Consensus 260 l~~~-----------~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~ 328 (376)
+... +|++.+.... +..+.||.++... ..+..+........-+.+..++.++....++.+.+||++
T Consensus 537 ~~~sp~~~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 537 ISWKPAEKGANEEEIEEDLVATGSL--DTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVV 613 (615)
T ss_dssp EEECCCC------CCSCCEEEEEET--TSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC
T ss_pred EEEcCccccccccccCCCEEEEEcC--CCcEEEEECCCCc-eechhhhcCccceEEEEEcCCCCeEEecCCceEEEEeee
Confidence 3332 5666666665 6799999998732 233333112222344566677774444457779999887
Q ss_pred CC
Q 036621 329 TG 330 (376)
Q Consensus 329 ~~ 330 (376)
++
T Consensus 614 ~~ 615 (615)
T 1pgu_A 614 LE 615 (615)
T ss_dssp --
T ss_pred cC
Confidence 53
No 135
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=62.81 E-value=83 Score=27.90 Aligned_cols=185 Identities=11% Similarity=0.038 Sum_probs=91.6
Q ss_pred CCCeEEEEecCcccce--ecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCc
Q 036621 117 LNNRITLWNIATRESI--TLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNS 194 (376)
Q Consensus 117 ~~~~~~v~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~ 194 (376)
..+.+.|||....... .++... .+... ...+.+.+.++.+-+.+- .+ ..+.+|+..++.
T Consensus 55 ~~g~i~v~~~~~~~~~~~~~~~~~--~h~~~-----V~~~~~~p~~~~~l~s~s-----~d-------g~v~vw~~~~~~ 115 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRVDKNVPLVC--GHTAP-----VLDIAWCPHNDNVIASGS-----ED-------CTVMVWEIPDGG 115 (402)
T ss_dssp SSCCEEEEETTCCEECCTTCCCBC--CCSSC-----EEEEEECTTCTTEEEEEE-----TT-------SEEEEEECCTTC
T ss_pred CCCEEEEEECccCCCCCCCCceEe--cCCCC-----EEEEEeCCCCCCEEEEEe-----CC-------CeEEEEEccCCC
Confidence 4678899997443221 111111 11221 467777775444333332 22 478899988764
Q ss_pred eEecc-CCCccc---cCCcceeEe--Cc-eEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-CC
Q 036621 195 WKNLK-PIDYTM---RLSSERTYF--DG-AFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 195 W~~~~-~~p~~~---~~~~~~v~~--~G-~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~G 265 (376)
..... .....+ ...-..+.+ +| .+...+.. ...|..+|+.+.+.... ....+... -..+.-. +|
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~--v~~~~~~~~~ 188 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-----DNVILVWDVGTGAAVLTLGPDVHPDT--IYSVDWSRDG 188 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-----TSCEEEEETTTTEEEEEECTTTCCSC--EEEEEECTTS
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-----CCEEEEEECCCCCccEEEecCCCCCc--eEEEEECCCC
Confidence 42111 000000 000111222 33 23333332 44788999887654322 21222111 2233333 67
Q ss_pred eEEEEEEecCCCEEEEEEecCCceeeEEEE-ccCCce-eEeEEEeeCCcEEEEe----cCCEEEEEECCCCC
Q 036621 266 SLSLLILDNVDHCFKIWVMRKKNWIKQLTV-GPFIGI-FQPLLFWKKGAFFVES----NSSQLLLYEPGTGE 331 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i-~~~~~~-~~~~~~~~~~~l~~~~----~~~~~~~yd~~~~~ 331 (376)
++.+.... +..+.||.+.... .+..+ ...... ..-+.+..++.++... .++.+.+||.++.+
T Consensus 189 ~~l~~~~~--d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 189 ALICTSCR--DKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SCEEEEET--TSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CEEEEEec--CCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 76666665 7899999987633 22333 122211 2234445667776665 46789999998754
No 136
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=62.51 E-value=75 Score=27.28 Aligned_cols=63 Identities=10% Similarity=0.114 Sum_probs=37.7
Q ss_pred CeEEEEEEecCCCEEEEEEecC-C-ceeeEEEEccC--CceeEeEEEeeCCcEEEE-ecCCEEEEEECCC
Q 036621 265 QSLSLLILDNVDHCFKIWVMRK-K-NWIKQLTVGPF--IGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGT 329 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~-~-~W~~~~~i~~~--~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~ 329 (376)
|++.++... +..+.+|.++. . .......+... .....-+++..++.+++. ..++.+.+||+.+
T Consensus 299 ~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ--VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT--TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEec--CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 666665555 67899999987 2 22244455212 122444556667776554 4577899999864
No 137
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=62.39 E-value=83 Score=27.76 Aligned_cols=193 Identities=13% Similarity=0.057 Sum_probs=99.6
Q ss_pred ceeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceE
Q 036621 107 LYCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLV 185 (376)
Q Consensus 107 s~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (376)
..+|.|...+ ...++..+++.++....+..... .. ..++.+|+..+. +.... . .. ..+
T Consensus 82 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---~~------p~glavd~~~g~--ly~~d----~----~~--~~I 140 (349)
T 3v64_C 82 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---ES------PGGLAVDWVHDK--LYWTD----S----GT--SRI 140 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---SC------CCEEEEETTTTE--EEEEE----T----TT--TEE
T ss_pred ccccEEEEEeccCCceEEEecCCCCceEEEeCCC---CC------ccEEEEecCCCe--EEEEc----C----CC--CeE
Confidence 3567776665 45678888887766444322211 11 247777765543 22221 1 11 467
Q ss_pred EEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE
Q 036621 186 AVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI 262 (376)
Q Consensus 186 ~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~ 262 (376)
++++.....-+.+.. ..... ..++.+ +|.+||.... ....|..+|++...-..+- ..... ....|+.
T Consensus 141 ~~~~~dG~~~~~l~~--~~l~~-P~~iavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~-~~~~~--~PnGla~ 210 (349)
T 3v64_C 141 EVANLDGAHRKVLLW--QSLEK-PRAIALHPMEGTIYWTDWG----NTPRIEASSMDGSGRRIIA-DTHLF--WPNGLTI 210 (349)
T ss_dssp EEEETTSCSCEEEEC--TTCSC-EEEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEESC-CSSCS--CEEEEEE
T ss_pred EEEcCCCCceEEEEe--CCCCC-cceEEEecCcCeEEEeccC----CCCEEEEEeCCCCCcEEEE-ECCCC--CcceEEE
Confidence 777776543332211 11111 123333 6899998754 2368999999875544431 11111 1344555
Q ss_pred E--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe-eCCcEEEEec-CCEEEEEECCCC-CEEEEE
Q 036621 263 Y--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW-KKGAFFVESN-SSQLLLYEPGTG-ELRDFE 336 (376)
Q Consensus 263 ~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~l~~~~~-~~~~~~yd~~~~-~~~~v~ 336 (376)
. +|+|+++... ...|....++... . ...+ .. .+..|.++. .++.+|+... ...+..+|..++ ..+.+.
T Consensus 211 d~~~~~lY~aD~~--~~~I~~~~~dG~~-~-~~~~-~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 211 DYAGRRMYWVDAK--HHVIERANLDGSH-R-KAVI-SQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTSCS-C-EEEE-CS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCEEEEEECC--CCEEEEEeCCCCc-e-EEEE-eC-CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 4 6788888764 4555555544411 1 1112 11 123444443 3455666654 567999995444 445544
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=61.49 E-value=45 Score=28.58 Aligned_cols=105 Identities=8% Similarity=-0.033 Sum_probs=57.1
Q ss_pred eCceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE-CCe-EEEEEEecCCCEEEEEEecCCcee
Q 036621 214 FDGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRKKNWI 290 (376)
Q Consensus 214 ~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~W~ 290 (376)
-+|.+|..... ...|..+|+.+.+.. .++.+.... ...+... +|+ +++.... ...+.+|.++..+-
T Consensus 9 ~~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~~~v~~~~--~~~i~~~d~~t~~~- 77 (349)
T 1jmx_B 9 AGHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDKFG---PGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKN- 77 (349)
T ss_dssp TTCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSCCS---SCEEEECTTSSEEEEEETT--TTEEEEEETTTTEE-
T ss_pred CCCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCCCC---CceeEECCCCCEEEEEeCC--CCcEEEEeCCCCcE-
Confidence 35566555543 568999999887653 446554111 1233333 566 4444333 67788887765332
Q ss_pred eEEEEccCCc-------eeEeEEEeeCCcEEE-Eec------------CCEEEEEECCCCC
Q 036621 291 KQLTVGPFIG-------IFQPLLFWKKGAFFV-ESN------------SSQLLLYEPGTGE 331 (376)
Q Consensus 291 ~~~~i~~~~~-------~~~~~~~~~~~~l~~-~~~------------~~~~~~yd~~~~~ 331 (376)
+..+ .... ....+.+..+++.++ ... ...+.+||+++++
T Consensus 78 -~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 78 -TFHA-NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp -EEEE-ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred -EEEE-EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 2233 2211 022355566676444 332 3689999998743
No 139
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=60.14 E-value=82 Score=26.99 Aligned_cols=196 Identities=9% Similarity=0.052 Sum_probs=91.6
Q ss_pred EEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcC
Q 036621 112 VFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLR 191 (376)
Q Consensus 112 l~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~ 191 (376)
|+.......+.|||..+++....-.. .... ...+.+.+. +++-+.. . .+ ..+.+|+..
T Consensus 47 l~~~~~dg~i~vwd~~~~~~~~~~~~----h~~~-----v~~~~~~~~-~~~l~s~--~---~d-------g~i~iwd~~ 104 (369)
T 3zwl_B 47 LFSCSKDSSASVWYSLNGERLGTLDG----HTGT-----IWSIDVDCF-TKYCVTG--S---AD-------YSIKLWDVS 104 (369)
T ss_dssp EEEEESSSCEEEEETTTCCEEEEECC----CSSC-----EEEEEECTT-SSEEEEE--E---TT-------TEEEEEETT
T ss_pred EEEEeCCCEEEEEeCCCchhhhhhhh----cCCc-----EEEEEEcCC-CCEEEEE--e---CC-------CeEEEEECC
Confidence 33334567889999988775542111 1111 346666653 3332222 1 22 478888887
Q ss_pred CCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceee-e-cC---C-----CCCCCCCceEEE
Q 036621 192 TNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-I-QG---P-----CILESSLDVTLG 261 (376)
Q Consensus 192 t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i-~~---P-----~~~~~~~~~~l~ 261 (376)
++.-...-..+.... .-...-+|.....+..........|..||+.+..... + .. + ..........+.
T Consensus 105 ~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 105 NGQCVATWKSPVPVK--RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TCCEEEEEECSSCEE--EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCcEEEEeecCCCeE--EEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 754322221111000 0011113444443332101112577777776543211 0 00 0 000000112222
Q ss_pred EE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEEE
Q 036621 262 IY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELRD 334 (376)
Q Consensus 262 ~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~~ 334 (376)
.. +|+..++... +..+.+|.+... ...+..+........-+.+..++..++. ..++.+.+||.++++...
T Consensus 183 ~~~~~~~l~~~~~--dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 183 WSTKGKYIIAGHK--DGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp ECGGGCEEEEEET--TSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EcCCCCEEEEEcC--CCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 22 5665555555 688999988761 2233333112222334555566765544 457889999999876543
No 140
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=59.85 E-value=83 Score=26.94 Aligned_cols=70 Identities=6% Similarity=0.041 Sum_probs=44.0
Q ss_pred CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEE-EecCCEEEEEECCCCCEEEEE
Q 036621 265 QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFV-ESNSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~yd~~~~~~~~v~ 336 (376)
|++.+.... +..+.||.++.........+........-+.+..+++.++ ...++.+.+||.++++...+.
T Consensus 54 g~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 124 (368)
T 3mmy_A 54 GNFLIAGSW--ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA 124 (368)
T ss_dssp SEEEEEEET--TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEECC--CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec
Confidence 466666665 6889999998744444333312222234455566676554 445788999999998766543
No 141
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=59.21 E-value=86 Score=26.92 Aligned_cols=202 Identities=8% Similarity=0.058 Sum_probs=98.2
Q ss_pred EEEecCCCeEEEEecCcccceecCCCccCCC----------CccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcc
Q 036621 112 VFIEGLNNRITLWNIATRESITLPKYRAIIP----------QYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCA 181 (376)
Q Consensus 112 l~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~----------~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 181 (376)
+.+.....+++.+||.+++...+........ ...-......++.+|+..+. ++.. . ..
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~--l~v~-d---~~------ 100 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ--LYIV-D---CY------ 100 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE--EEEE-E---TT------
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc--EEEE-E---CC------
Confidence 4444455788889998876654432111000 00000001357777763332 2222 1 11
Q ss_pred cceEEEEEcCCCceEeccCC-Cc-cccCCcceeEe---CceEEEEecccC------------CCCceEEEEEEcCcccee
Q 036621 182 FSLVAVYTLRTNSWKNLKPI-DY-TMRLSSERTYF---DGAFYWLLKLEN------------DNDSYVILSFNMADEKFQ 244 (376)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~-p~-~~~~~~~~v~~---~G~lYwl~~~~~------------~~~~~~il~fD~~~~~~~ 244 (376)
..+..|+..++..+.+... .. .... ...+.+ +|.+|+...... ......|..||..+.+..
T Consensus 101 -~~i~~~d~~~g~~~~~~~~~~~~~~~~-p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 101 -YHLSVVGSEGGHATQLATSVDGVPFKW-LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp -TEEEEECTTCEECEEEESEETTEECSC-EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred -CCEEEEeCCCCEEEEecccCCCCcccc-cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 2355566555544443311 11 1111 123444 678887653210 012367999999877665
Q ss_pred eecCCCCCCCCCceEEEEE-CCe-EEEEEEecCCCEEEEEEecC---CceeeEEEEccCCceeEeEEEeeCCcEEEEecC
Q 036621 245 EIQGPCILESSLDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRK---KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNS 319 (376)
Q Consensus 245 ~i~~P~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~---~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 319 (376)
.+.- .... ...++.. +|+ |++.... ...+.++.++. ........+ + . ..-+++..+|.+++....
T Consensus 179 ~~~~--~~~~--p~gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~~-~--g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 179 LLLK--ELHV--PGGAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTAEVLVKI-P--N-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEE--EESC--CCEEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCEEEEEEC-S--S-EEEEEECTTSCEEEEEEE
T ss_pred Eecc--CCcc--CcceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCccceEEeC-C--C-CCCeEECCCCCEEEEecC
Confidence 4410 0000 1223443 455 6665554 45666655554 233333322 2 1 233455667778776543
Q ss_pred -----------CEEEEEECCCCCEEEEEE
Q 036621 320 -----------SQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 320 -----------~~~~~yd~~~~~~~~v~~ 337 (376)
..+..||++.+..+.+..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~G~~~~~~~~ 277 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEFGNILEVIPL 277 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTTSCEEEEEEC
T ss_pred cccccccCCCccEEEEECCCCCEEEEEEC
Confidence 469999998776766654
No 142
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=58.10 E-value=98 Score=27.23 Aligned_cols=94 Identities=10% Similarity=0.130 Sum_probs=49.5
Q ss_pred ceEEEEEEcCccce-----eeecC---CCCCCCCCceEEEEE-C-CeEEEEEEecCCCEEEEEEecCCceeeEEEEccC-
Q 036621 230 SYVILSFNMADEKF-----QEIQG---PCILESSLDVTLGIY-Y-QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPF- 298 (376)
Q Consensus 230 ~~~il~fD~~~~~~-----~~i~~---P~~~~~~~~~~l~~~-~-G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~- 298 (376)
...|..+|+.+.+- ..+.+ ..+.. ....+... + +.+.+.... +..+.||.++..+- +..+ ..
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~--~~~~-~~~ 207 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD--EVISLAWNQSLAHVFASAGS--SNFASIWDLKAKKE--VIHL-SYT 207 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC--CCCEEEECSSCTTEEEEESS--SSCEEEEETTTTEE--EEEE-CCC
T ss_pred CCeEEEEECCCCccccccccccccccccCCCC--CeeEEEeCCCCCcEEEEEcC--CCCEEEEECCCCCc--ceEE-ecc
Confidence 45788899887651 11111 11111 12233333 3 456555555 67899999877432 3333 22
Q ss_pred ------CceeEeEEEeeCC-cEEEEe-cCC---EEEEEECCCC
Q 036621 299 ------IGIFQPLLFWKKG-AFFVES-NSS---QLLLYEPGTG 330 (376)
Q Consensus 299 ------~~~~~~~~~~~~~-~l~~~~-~~~---~~~~yd~~~~ 330 (376)
.....-+.+..++ .+++.. .++ .+.+||+++.
T Consensus 208 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 208 SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 1223334555555 454443 344 7999999874
No 143
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=58.04 E-value=1.5e+02 Score=29.20 Aligned_cols=184 Identities=10% Similarity=0.050 Sum_probs=86.5
Q ss_pred ecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCc
Q 036621 115 EGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNS 194 (376)
Q Consensus 115 ~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~ 194 (376)
....+.+.|||..+++...--... ... ..++.+.+.. .+ +.... .+ ..+.+|+..++.
T Consensus 31 ~~~~g~v~iwd~~~~~~~~~~~~~---~~~------v~~~~~s~~~-~~--l~~~~---~d-------g~i~vw~~~~~~ 88 (814)
T 3mkq_A 31 TLYSGRVEIWNYETQVEVRSIQVT---ETP------VRAGKFIARK-NW--IIVGS---DD-------FRIRVFNYNTGE 88 (814)
T ss_dssp EETTSEEEEEETTTTEEEEEEECC---SSC------EEEEEEEGGG-TE--EEEEE---TT-------SEEEEEETTTCC
T ss_pred EeCCCEEEEEECCCCceEEEEecC---CCc------EEEEEEeCCC-CE--EEEEe---CC-------CeEEEEECCCCc
Confidence 334567899998887654321111 111 3455555532 22 22222 22 478888888765
Q ss_pred eEecc-CCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE--CCeEEEEE
Q 036621 195 WKNLK-PIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY--YQSLSLLI 271 (376)
Q Consensus 195 W~~~~-~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~--~G~L~~~~ 271 (376)
....- ....... .-...-+|.....+. ....|..+|+.++.-....+..+.. ....+.-. +|.+.++.
T Consensus 89 ~~~~~~~~~~~v~--~~~~s~~~~~l~~~~-----~dg~i~vw~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 89 KVVDFEAHPDYIR--SIAVHPTKPYVLSGS-----DDLTVKLWNWENNWALEQTFEGHEH--FVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEEEECCSSCEE--EEEECSSSSEEEEEE-----TTSEEEEEEGGGTSEEEEEEECCSS--CEEEEEEETTEEEEEEEE
T ss_pred EEEEEecCCCCEE--EEEEeCCCCEEEEEc-----CCCEEEEEECCCCceEEEEEcCCCC--cEEEEEEEcCCCCEEEEE
Confidence 43221 1111000 001111343322332 2458889998775221111111111 12233333 35555555
Q ss_pred EecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEee--CCcEEEE-ecCCEEEEEECCCCCE
Q 036621 272 LDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWK--KGAFFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 272 ~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~--~~~l~~~-~~~~~~~~yd~~~~~~ 332 (376)
.. +..+.+|.+....-.....- ........+.+.. ++..++. ..++.+..||.++++.
T Consensus 160 ~~--dg~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 160 CL--DRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp ET--TSEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred eC--CCeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 55 68899999876222221111 1111122334443 5555444 4467899999887653
No 144
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=57.89 E-value=1e+02 Score=27.29 Aligned_cols=195 Identities=8% Similarity=0.039 Sum_probs=97.2
Q ss_pred ec-eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CG-IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~G-ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+| +|........+.+||..+++....-... ... ...+.+.+.. ++ +.... .+ ..+.+
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h---~~~------v~~~~~~~~~-~~--l~s~s---~d-------~~i~i 165 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAH---VSE------ITKLKFFPSG-EA--LISSS---QD-------MQLKI 165 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSS---SSC------EEEEEECTTS-SE--EEEEE---TT-------SEEEE
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccc---cCc------cEEEEECCCC-CE--EEEEe---CC-------CeEEE
Confidence 44 4444446678999999988776543211 111 4567776643 22 22211 22 47888
Q ss_pred EEcCCCc-eEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEE---
Q 036621 188 YTLRTNS-WKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGI--- 262 (376)
Q Consensus 188 yss~t~~-W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~--- 262 (376)
|+..++. =+.......... .-...-+|.....+.. ...|..+|+.+.+... +..+...... ...+..
T Consensus 166 wd~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~ 237 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHRATVT--DIAIIDRGRNVLSASL-----DGTIRLWECGTGTTIHTFNRKENPHDG-VNSIALFVG 237 (420)
T ss_dssp EETTTCCCCEEEECCSSCEE--EEEEETTTTEEEEEET-----TSCEEEEETTTTEEEEEECBTTBTTCC-EEEEEEEEC
T ss_pred EeCCCCcCceEEcCCCCcEE--EEEEcCCCCEEEEEcC-----CCcEEEeECCCCceeEEeecCCCCCCC-ccEEEEecC
Confidence 8887643 111111111000 0011114544333332 3468888887665432 3332221110 111111
Q ss_pred -------------------ECCeEEEEEEecCCCEEEEEEecCCceeeEEEEc-cCCceeEeEEEeeCCc-EEEE-ecCC
Q 036621 263 -------------------YYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVG-PFIGIFQPLLFWKKGA-FFVE-SNSS 320 (376)
Q Consensus 263 -------------------~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~-~~~~~~~~~~~~~~~~-l~~~-~~~~ 320 (376)
-+|++.++... +..+.+|.+.... ....+. .......-+.+..++. +++. ..++
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHV--SGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEET--TSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcC--CCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCC
Confidence 15666655555 6789999887632 233331 1122234455566666 5544 4568
Q ss_pred EEEEEECCCCC--EEEEEE
Q 036621 321 QLLLYEPGTGE--LRDFEL 337 (376)
Q Consensus 321 ~~~~yd~~~~~--~~~v~~ 337 (376)
.+.+||+++++ ...+..
T Consensus 314 ~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp EEEEEETTCTTSCSEEEEE
T ss_pred eEEEEEcCCCcCchhhhhc
Confidence 89999999864 445443
No 145
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=57.17 E-value=98 Score=26.93 Aligned_cols=139 Identities=16% Similarity=0.051 Sum_probs=72.8
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~ 259 (376)
..+++++.....=+.+.. ..... ..++.+ +|.+||.... ....|..+|++...-..+-- .... ....
T Consensus 101 ~~I~~~~~dG~~~~~l~~--~~~~~-P~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~-~~l~--~Png 170 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLFW--QELDQ-PRAIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIIN-SEIY--WPNG 170 (318)
T ss_dssp TEEEEEETTSCSCEEEEC--SSCSS-EEEEEEEGGGTEEEEEECS----SSCEEEEEETTSCSCEEEEC-SSCS--CEEE
T ss_pred CEEEEEECCCCcEEEEEe--CCCCC-ccEEEEeCCCCEEEEEecC----CCCEEEEEEcCCCCeEEEEE-CCCC--CccE
Confidence 467777776543222210 11111 224444 5899998643 24689999997654433311 1111 1344
Q ss_pred EEEE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeC-CcEEEEec-CCEEEEEECCCCC-EEE
Q 036621 260 LGIY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKK-GAFFVESN-SSQLLLYEPGTGE-LRD 334 (376)
Q Consensus 260 l~~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~-~~l~~~~~-~~~~~~yd~~~~~-~~~ 334 (376)
|+.. +|+|+++... ...|....++... ...+.. ..+..|.++.-+ +.+|+... .+.+..+|+.+++ .+.
T Consensus 171 lavd~~~~~lY~aD~~--~~~I~~~d~dG~~---~~~~~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 171 LTLDYEEQKLYWADAK--LNFIHKSNLDGTN---RQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTSCS---CEEEEC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEeccCCEEEEEECC--CCEEEEEcCCCCc---eEEEec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEE
Confidence 5555 6788888764 4555555554411 111201 123455555443 44555543 5689999996654 444
Q ss_pred EEE
Q 036621 335 FEL 337 (376)
Q Consensus 335 v~~ 337 (376)
+..
T Consensus 245 i~~ 247 (318)
T 3sov_A 245 IHS 247 (318)
T ss_dssp EEC
T ss_pred EeC
Confidence 443
No 146
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=57.04 E-value=1.4e+02 Score=28.85 Aligned_cols=96 Identities=10% Similarity=0.139 Sum_probs=59.1
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (376)
...|..+|+.+.+.... +..+.. .-..+... +|++.+.... +..+.||.+.... .+..+ ........+++.
T Consensus 540 d~~v~vwd~~~~~~~~~-~~~h~~--~v~~v~~spdg~~l~sg~~--Dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~s 611 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRST-LAGHTG--YVSTVAVSPDGSLCASGGK--DGVVLLWDLAEGK--KLYSL-EANSVIHALCFS 611 (694)
T ss_dssp TSCEEEEETTTCCEEEE-ECCCSS--CEEEEEECTTSSEEEEEET--TSBCEEEETTTTE--EEECC-BCSSCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEE-EcCCCC--CEEEEEEeCCCCEEEEEeC--CCeEEEEECCCCc--eEEEe-cCCCcEEEEEEc
Confidence 45788899887654332 111111 12233333 6777666666 7889999987632 23333 222234456667
Q ss_pred eCCcEEEEecCCEEEEEECCCCCEE
Q 036621 309 KKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 309 ~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
.++.++....+..+.+||+++++..
T Consensus 612 p~~~~l~~~~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 612 PNRYWLCAATEHGIKIWDLESKSIV 636 (694)
T ss_dssp SSSSEEEEEETTEEEEEETTTTEEE
T ss_pred CCCcEEEEEcCCCEEEEECCCCCCh
Confidence 7778777777888999999988654
No 147
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=55.71 E-value=1.4e+02 Score=28.44 Aligned_cols=197 Identities=10% Similarity=-0.030 Sum_probs=100.4
Q ss_pred eceEEEec-CCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
++++.+.. +.+.+.|+|+.|++... +|... . ..++.+++. ++|-.+. . .+ ..+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-----~------p~~v~~SpD-Gr~lyv~--~---~d-------g~V~ 221 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-----A------VHISRLSAS-GRYLFVI--G---RD-------GKVN 221 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS-----C------EEEEEECTT-SCEEEEE--E---TT-------SEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-----C------ccceEECCC-CCEEEEE--c---CC-------CeEE
Confidence 45665554 57899999999987663 44221 1 235555553 3343322 1 11 3688
Q ss_pred EEEcCCCceEeccCCCc-cccCCcceeEe-----CceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCC------
Q 036621 187 VYTLRTNSWKNLKPIDY-TMRLSSERTYF-----DGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILE------ 253 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~-~~~~~~~~v~~-----~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~------ 253 (376)
+|+..+..-+.+..++. ... ....+- +|..-+.... ....+.++|..+.+- ..++......
T Consensus 222 viD~~~~t~~~v~~i~~G~~P--~~ia~s~~~~pDGk~l~v~n~----~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~ 295 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGSEA--RSIETSKMEGWEDKYAIAGAY----WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 295 (567)
T ss_dssp EEETTSSSCCEEEEEECCSEE--EEEEECCSTTCTTTEEEEEEE----ETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred EEECCCCCCcEeEEEecCCCC--ceeEEccccCCCCCEEEEEEc----cCCeEEEEECCCCcEEEEEecccccccccccc
Confidence 88874222233322222 111 111222 5754444433 256888999776443 2234322100
Q ss_pred -CCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEec--CCEEEEEECCC
Q 036621 254 -SSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN--SSQLLLYEPGT 329 (376)
Q Consensus 254 -~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~yd~~~ 329 (376)
......+... ++...++... ....+.+.-..+....++..| +........++..+++.++... +.++.++|.++
T Consensus 296 p~~rva~i~~s~~~~~~vv~~~-~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 296 PEPRVAAILASHYRPEFIVNVK-ETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp SCCCEEEEEECSSSSEEEEEET-TTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred CCCceEEEEEcCCCCEEEEEec-CCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 0011223333 3445555542 244444444444455566667 4444344566777787655433 57899999999
Q ss_pred CCEE-EEEE
Q 036621 330 GELR-DFEL 337 (376)
Q Consensus 330 ~~~~-~v~~ 337 (376)
+++. .+..
T Consensus 374 ~kl~~~i~v 382 (567)
T 1qks_A 374 GKLVAIEDT 382 (567)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEec
Confidence 9764 3344
No 148
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=54.64 E-value=1.2e+02 Score=27.13 Aligned_cols=87 Identities=10% Similarity=0.157 Sum_probs=50.5
Q ss_pred eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEE
Q 036621 244 QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQL 322 (376)
Q Consensus 244 ~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 322 (376)
..+..|.-..+-+...|.=..+.+..+. . +..+.||-.+..+-.....+........-+++..+|..++. ..++.+
T Consensus 95 ~~l~ap~~~~d~y~~~l~wS~~n~lAvg-l--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v 171 (420)
T 4gga_A 95 RILDAPEIRNDYYLNLVDWSSGNVLAVA-L--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 171 (420)
T ss_dssp EEEECTTCCCCTTCBCEEECTTSEEEEE-E--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred eEEECCCCcccccceeEEECCCCEEEEE-e--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeE
Confidence 4456666554422233333344443333 3 67899999877655555554112222444666777776554 457789
Q ss_pred EEEECCCCCEE
Q 036621 323 LLYEPGTGELR 333 (376)
Q Consensus 323 ~~yd~~~~~~~ 333 (376)
.+||.++++..
T Consensus 172 ~iWd~~~~~~~ 182 (420)
T 4gga_A 172 QLWDVQQQKRL 182 (420)
T ss_dssp EEEETTTTEEE
T ss_pred EEEEcCCCcEE
Confidence 99999988643
No 149
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=54.61 E-value=1e+02 Score=26.32 Aligned_cols=103 Identities=11% Similarity=0.112 Sum_probs=54.9
Q ss_pred ceEEEEEEcCc-cceeee-cCCCCCCCCCceEEEEE-CC----eEEEEEEecCCCEEEEEEecC---CceeeEEEEccCC
Q 036621 230 SYVILSFNMAD-EKFQEI-QGPCILESSLDVTLGIY-YQ----SLSLLILDNVDHCFKIWVMRK---KNWIKQLTVGPFI 299 (376)
Q Consensus 230 ~~~il~fD~~~-~~~~~i-~~P~~~~~~~~~~l~~~-~G----~L~~~~~~~~~~~l~iW~l~~---~~W~~~~~i~~~~ 299 (376)
...|..+|+.+ +.|..+ .+..+... -..+.-. +| .+.+.... +..+.||.++. ..|.....- ...
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~~h~~~--V~~v~~sp~~~~~~~~las~s~--D~~v~iw~~~~~~~~~~~~~~~~-~~~ 262 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLEAHSDW--VRDVAWAPSIGLPTSTIASCSQ--DGRVFIWTCDDASSNTWSPKLLH-KFN 262 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCBCCSSC--EEEEECCCCSSCSCCEEEEEET--TCEEEEEECSSTTCCCCBCCEEE-ECS
T ss_pred CCeEEEEEeCCCCccceeeecccCCCc--eEEEEecCCCCCCCceEEEEcC--CCeEEEEEccCccccchhhhhhh-cCC
Confidence 34677788764 345444 33322211 1222222 22 44444444 78999999876 445432211 222
Q ss_pred ceeEeEEEeeCCcEEEE-ecCCEEEEEECC-CCCEEEEEE
Q 036621 300 GIFQPLLFWKKGAFFVE-SNSSQLLLYEPG-TGELRDFEL 337 (376)
Q Consensus 300 ~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~-~~~~~~v~~ 337 (376)
....-+++..++.++.. ..++.+.+|+.. .+.|+.+..
T Consensus 263 ~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 263 DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISD 302 (316)
T ss_dssp SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeee
Confidence 22344555666765544 457778888875 457777653
No 150
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=54.56 E-value=1e+02 Score=26.48 Aligned_cols=158 Identities=10% Similarity=0.055 Sum_probs=77.0
Q ss_pred eceEEEec--CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 109 CGIVFIEG--LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 109 ~Gll~~~~--~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
+|.+.+.. ...++.++|+..+....+...........-.+....++.+|+..+..-|... .+ ..+.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-----~~-------~~I~ 221 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-----EN-------GRIQ 221 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-----TT-------TEEE
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-----CC-------CEEE
Confidence 67777666 3678888886444333343221110000000011357788876443222211 11 4788
Q ss_pred EEEcCCCceEeccCCCc----c----ccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCce
Q 036621 187 VYTLRTNSWKNLKPIDY----T----MRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDV 258 (376)
Q Consensus 187 vyss~t~~W~~~~~~p~----~----~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 258 (376)
+|+..++.....-..+. . +.. ...+..+|.+|.... ....|..+|..+.+....-.+.........
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQ-----EPVQGFVMNFSSGEIIDVFKPVRKHFDMPH 295 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCS-----CCCCEEEEETTTCCEEEEECCSSSCCSSEE
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccC-----CCcEEEEEEcCCCeEEEEEcCCCCccCCee
Confidence 99988665533221111 0 111 112223444333221 345789999887766544211111111233
Q ss_pred EEEEE-CCeEEEEEEecCCCEEEEEEecC
Q 036621 259 TLGIY-YQSLSLLILDNVDHCFKIWVMRK 286 (376)
Q Consensus 259 ~l~~~-~G~L~~~~~~~~~~~l~iW~l~~ 286 (376)
.++.. +|.|++.... ...+.+|.++.
T Consensus 296 ~ia~~~dG~lyvad~~--~~~I~~~~~~~ 322 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAH--TNTVWKFTLTE 322 (329)
T ss_dssp EEEECTTSEEEEEESS--SCCEEEEEEEE
T ss_pred EEEECCCCCEEEEECC--CCEEEEEeCCc
Confidence 44444 6778877765 66888887765
No 151
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=54.38 E-value=99 Score=26.17 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=48.5
Q ss_pred ceEEEEEEcCccceee-ecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCc--eeeEE-----EEccCCce
Q 036621 230 SYVILSFNMADEKFQE-IQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKN--WIKQL-----TVGPFIGI 301 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~--W~~~~-----~i~~~~~~ 301 (376)
...|..+|+.+.+-.. +..... ...+....+...++... +..+.||.++... +.... ........
T Consensus 236 Dg~i~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYTLDGGDI-----INALCFSPNRYWLCAAT--GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp TCEEEEEETTTTEEEEEEECSSC-----EEEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEECCC-------CCCCC
T ss_pred CCeEEEEEeccCceeeeecCCce-----EEeeecCCCCceeeccC--CCEEEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 4578888987755322 222111 22333334444444445 6789999887621 11110 00000111
Q ss_pred eEeEEEeeCCcEEEEe-cCCEEEEEECCCCC
Q 036621 302 FQPLLFWKKGAFFVES-NSSQLLLYEPGTGE 331 (376)
Q Consensus 302 ~~~~~~~~~~~l~~~~-~~~~~~~yd~~~~~ 331 (376)
..-+++..++..++.. .++.+.+||++|++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 3335556777766654 46789999998864
No 152
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=54.01 E-value=1.1e+02 Score=26.65 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=38.8
Q ss_pred EEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEcc---C---CceeEeEEEeeCCcEEEEe-cC---CEEEEEEC
Q 036621 259 TLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGP---F---IGIFQPLLFWKKGAFFVES-NS---SQLLLYEP 327 (376)
Q Consensus 259 ~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~---~---~~~~~~~~~~~~~~l~~~~-~~---~~~~~yd~ 327 (376)
.+... +| +.++... +..+.+|.+.... .+..+.. . .....-+.+..++.+++.. .+ +.+.+||+
T Consensus 191 ~~~~~~~~-~l~~~~~--dg~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 191 SVDISERG-LIATGFN--NGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp EEEECTTS-EEEEECT--TSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred EEEECCCc-eEEEEeC--CCcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 33333 45 3333334 7889999987632 2333311 1 2223445555667765544 35 68999999
Q ss_pred CCCCE
Q 036621 328 GTGEL 332 (376)
Q Consensus 328 ~~~~~ 332 (376)
++++.
T Consensus 266 ~~~~~ 270 (397)
T 1sq9_A 266 EFGER 270 (397)
T ss_dssp TTCCE
T ss_pred CCCcc
Confidence 87753
No 153
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=53.63 E-value=1.3e+02 Score=27.20 Aligned_cols=194 Identities=12% Similarity=0.038 Sum_probs=97.1
Q ss_pred eeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|-|.+.. ...++.++|+.+++...+..... . .. +.+++..+ .++.. . ... . ..+.
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----~------~~-ia~~~~g~--~l~~~-d-~~~----~---~~I~ 197 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----G------GK-PAVTKDKQ--RVYSI-G-WEG----T---HTVY 197 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETCC----B------CB-CEECTTSS--EEEEE-B-SST----T---CEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccCC----C------Cc-eeEecCCC--cEEEE-e-cCC----C---ceEE
Confidence 466666555 45789999999888776543311 1 11 44444433 22222 0 101 0 2566
Q ss_pred EEEcCCCc-eEeccCCCc-cccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCc-e-
Q 036621 187 VYTLRTNS-WKNLKPIDY-TMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLD-V- 258 (376)
Q Consensus 187 vyss~t~~-W~~~~~~p~-~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~-~- 258 (376)
+++..++. .+....+.. .... ..++.+ +|.+|+ +.. ...|..||+.+.....+ ..+........ .
T Consensus 198 ~~d~~~~~~~~~~g~~~~~~~~~-p~~iav~p~~g~lyv-~d~-----~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 198 VYMKASGWAPTRIGQLGSTFSGK-IGAVALDETEEWLYF-VDS-----NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEGGGTTCEEEEEECCTTSCSC-CCBCEECTTSSEEEE-ECT-----TCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred EEEcCCCceeEEeeeccchhcCC-cEEEEEeCCCCeEEE-EEC-----CCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 66665432 233311111 1111 112232 689999 332 45899999988765555 11111111112 2
Q ss_pred EEEEE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccC------------CceeEe--EEEeeCCcEEEEec--CC
Q 036621 259 TLGIY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPF------------IGIFQP--LLFWKKGAFFVESN--SS 320 (376)
Q Consensus 259 ~l~~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~------------~~~~~~--~~~~~~~~l~~~~~--~~ 320 (376)
.++.. +|.|++.... ...+..|..+.. -..+ .+.. ..+..| +++..+|.+|+... +.
T Consensus 271 ~ia~~p~~g~lyv~d~~--~~~I~~~~~~g~-~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQN--LSSVYKITPDGE-CEWF--CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEECTTCC-EEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred cEEEeCCCCEEEEEeCC--CCEEEEEecCCC-EEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 55555 5788877654 454444433322 1111 1111 012223 45566778877764 46
Q ss_pred EEEEEECCCCCEEEE
Q 036621 321 QLLLYEPGTGELRDF 335 (376)
Q Consensus 321 ~~~~yd~~~~~~~~v 335 (376)
++..+|+.+++...+
T Consensus 346 ~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 346 CLRKLDILDGYVSTV 360 (409)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEECCCCEEEEE
Confidence 799999777766544
No 154
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=53.50 E-value=1.1e+02 Score=26.53 Aligned_cols=61 Identities=13% Similarity=0.057 Sum_probs=34.3
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccce--eeecCCCCCCCCCceEEEE--ECCeEEEEEEecCCCEEEEEEecC
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKF--QEIQGPCILESSLDVTLGI--YYQSLSLLILDNVDHCFKIWVMRK 286 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~--~~i~~P~~~~~~~~~~l~~--~~G~L~~~~~~~~~~~l~iW~l~~ 286 (376)
+|.+||.... ...|..+++....- ..+. ..... ...++. .+|.|++.... ...+.+..++.
T Consensus 46 ~~~lyw~D~~-----~~~I~r~~~~g~~~~~~~~~--~~l~~--p~glavd~~~g~ly~~d~~--~~~I~~~~~dG 110 (318)
T 3sov_A 46 HGLIYWSDVS-----EEAIKRTEFNKTESVQNVVV--SGLLS--PDGLACDWLGEKLYWTDSE--TNRIEVSNLDG 110 (318)
T ss_dssp GTEEEEEETT-----TTEEEEEETTSSSCCCEEEE--ECCSC--CCEEEEETTTTEEEEEETT--TTEEEEEETTS
T ss_pred CCEEEEEECC-----CCcEEEEEccCCCceEEEEc--CCCCC--ccEEEEEcCCCeEEEEECC--CCEEEEEECCC
Confidence 5899998764 45899999876532 1121 11111 123444 36778777654 45555555544
No 155
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=53.06 E-value=1.2e+02 Score=26.69 Aligned_cols=188 Identities=8% Similarity=-0.035 Sum_probs=94.5
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
.+.|++... ..+...++.......+-... .. ..++.+|+..+...+.-+ .. ..+..+
T Consensus 44 ~~~ll~~~~-~~I~~i~~~g~~~~~~~~~~----~~------~~~l~~d~~~~~ly~~D~-----~~-------~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFANR-IDIRQVLPHRSEYTLLLNNL----EN------AIALDFHHRRELVFWSDV-----TL-------DRILRA 100 (349)
T ss_dssp CCEEEEECB-SCEEEECTTSCCEEEEECSC----SC------EEEEEEETTTTEEEEEET-----TT-------TEEEEE
T ss_pred CceeEeecc-cceEEEeCCCCeeEEeecCC----Cc------eEEEEEeccccEEEEEec-----cC-------CceEEE
Confidence 455555543 34566666555444332111 11 468888876553222211 11 366677
Q ss_pred EcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE--
Q 036621 189 TLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-- 263 (376)
Q Consensus 189 ss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-- 263 (376)
+..+..-+.+... .... ..++.+ +|.+||.... ...|.++|++...-..+. ..... ....+++.
T Consensus 101 ~~~g~~~~~~~~~--~~~~-p~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~-~~~l~--~P~~iavdp~ 169 (349)
T 3v64_C 101 NLNGSNVEEVVST--GLES-PGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLL-WQSLE--KPRAIALHPM 169 (349)
T ss_dssp ETTSCSCEEEECS--SCSC-CCEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEE-CTTCS--CEEEEEEETT
T ss_pred ecCCCCceEEEeC--CCCC-ccEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEE-eCCCC--CcceEEEecC
Confidence 7666544333210 0111 123443 6899998764 458999999876544432 11111 13445554
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEE--Ee-eCCcEEEEec-CCEEEEEECCCCCEEEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLL--FW-KKGAFFVESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~--~~-~~~~l~~~~~-~~~~~~yd~~~~~~~~v 335 (376)
+|.|++..... ...|....++... ...+ -...+..|.+ +. .++.||+... ..++..+|+.+...+.+
T Consensus 170 ~g~ly~td~~~-~~~I~r~~~dG~~---~~~~-~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 170 EGTIYWTDWGN-TPRIEASSMDGSG---RRII-ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp TTEEEEEECSS-SCEEEEEETTSCS---CEES-CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCeEEEeccCC-CCEEEEEeCCCCC---cEEE-EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 67788776541 2444444443311 1111 1122334444 44 3455666654 46799999887655544
No 156
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=52.85 E-value=1.9e+02 Score=29.00 Aligned_cols=80 Identities=13% Similarity=0.113 Sum_probs=45.6
Q ss_pred eEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceE
Q 036621 184 LVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVT 259 (376)
Q Consensus 184 ~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~ 259 (376)
.+++++.....=+.+..-...+ ..++.+ +|.|||.... ...|.++|+....-..+ ....... ....
T Consensus 538 ~I~~~~~dG~~~~~lv~~~l~~---P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~--~P~g 607 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLVTENIQW---PNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLA--HPFS 607 (791)
T ss_dssp EEEEEETTSCCEEEEECSSCSC---EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTS--SEEE
T ss_pred eEEEEecCCCceEEEEeCCCCC---ceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccC--CCCE
Confidence 5666666543333222100011 224544 5899998643 56899999977655444 3222221 2456
Q ss_pred EEEECCeEEEEEEe
Q 036621 260 LGIYYQSLSLLILD 273 (376)
Q Consensus 260 l~~~~G~L~~~~~~ 273 (376)
|+..++.|++....
T Consensus 608 lav~~~~lYwtD~~ 621 (791)
T 3m0c_C 608 LAVFEDKVFWTDII 621 (791)
T ss_dssp EEEETTEEEEEETT
T ss_pred EEEeCCEEEEEECC
Confidence 77788888888763
No 157
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=52.69 E-value=1.2e+02 Score=26.50 Aligned_cols=63 Identities=8% Similarity=0.013 Sum_probs=40.3
Q ss_pred CCeEEEEEEecCCCE-EEEEEecCCceeeEEEEcc---CCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCC
Q 036621 264 YQSLSLLILDNVDHC-FKIWVMRKKNWIKQLTVGP---FIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~-l~iW~l~~~~W~~~~~i~~---~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~ 331 (376)
+|++.+.... +.. +.||-+.. ...+..+ . ......-+++..++..++. ..++.+.+||+++..
T Consensus 206 ~g~~l~s~s~--d~~~v~iwd~~~--~~~~~~~-~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 206 KSDMVATCSQ--DGTIIRVFKTED--GVLVREF-RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSSEEEEEET--TCSEEEEEETTT--CCEEEEE-ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEeC--CCCEEEEEECCC--CcEEEEE-EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 6766666555 666 99998875 2344455 2 2222444566677776554 456789999998764
No 158
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=52.48 E-value=1.1e+02 Score=30.02 Aligned_cols=113 Identities=16% Similarity=0.224 Sum_probs=58.9
Q ss_pred cceeEeCceEEEEecccCCCCceEEEEEEcCc--cceeee-cCCCCCC-----CCCceEEEEECCeEEEEEEecCCCEEE
Q 036621 209 SERTYFDGAFYWLLKLENDNDSYVILSFNMAD--EKFQEI-QGPCILE-----SSLDVTLGIYYQSLSLLILDNVDHCFK 280 (376)
Q Consensus 209 ~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~~-----~~~~~~l~~~~G~L~~~~~~~~~~~l~ 280 (376)
..+++.+|.+|.... ...+.++|..+ +.|+.- ..+.... ......++..+|++++... +..+.
T Consensus 60 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~ 130 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGRLI 130 (668)
T ss_dssp CCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSEEE
T ss_pred cCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---CCEEE
Confidence 447889999999874 34899999865 455542 2221100 0001223445666655432 33444
Q ss_pred EEEecC--CceeeEEEEccCC---ceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEE
Q 036621 281 IWVMRK--KNWIKQLTVGPFI---GIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELR 333 (376)
Q Consensus 281 iW~l~~--~~W~~~~~i~~~~---~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~ 333 (376)
.+-.+. ..|+....- +.. ....|+. .++.+++... ++.++.||.+|++..
T Consensus 131 alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTTD-PAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp EEETTTCCEEEEEECSC-TTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEECCCCCEeeeeccCC-CCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 443333 556653211 100 0123322 3455655433 367999999998754
No 159
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=52.10 E-value=1.2e+02 Score=26.60 Aligned_cols=191 Identities=10% Similarity=0.086 Sum_probs=96.5
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccC-CCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEE
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAI-IPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYT 189 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~-~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (376)
.|+.......+.+||..+++....-..... ..... ...+.+.+.++.+-+..- .+ ..+.+|+
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~sgs-----~D-------~~v~~wd 234 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTAD-----VLSLSINSLNANMFISGS-----CD-------TTVRLWD 234 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSC-----EEEEEECSSSCCEEEEEE-----TT-------SCEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccC-----eEEEEeecCCCCEEEEEE-----CC-------CeEEEEE
Confidence 455555678899999999887653221111 11111 345555544443322221 22 4788888
Q ss_pred cCCC--ceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCC---CceEEE
Q 036621 190 LRTN--SWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESS---LDVTLG 261 (376)
Q Consensus 190 s~t~--~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~---~~~~l~ 261 (376)
.+.. .-+........ -.++.+ +|.....+.. ...|..+|+.+.+-.. +......... ....++
T Consensus 235 ~~~~~~~~~~~~~h~~~----v~~v~~~p~~~~l~s~s~-----D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 235 LRITSRAVRTYHGHEGD----INSVKFFPDGQRFGTGSD-----DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTTTCCCCEEECCCSSC----CCEEEECTTSSEEEEECS-----SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCCCcceEEECCcCCC----eEEEEEecCCCeEEEEcC-----CCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 7632 22222211110 112222 4544333332 4578889998765433 3332222111 112233
Q ss_pred EE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEcc----CCceeEeEEEeeCCcEEEEec-CCEEEEEECCCCC
Q 036621 262 IY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGP----FIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGTGE 331 (376)
Q Consensus 262 ~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~----~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~ 331 (376)
-. +|++.++... +..+.||-+...+ .+..+.. ......-+++..++..++... ++.+.+||+++++
T Consensus 306 ~s~~g~~l~~g~~--dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 306 FSISGRLLFAGYS--NGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECSSSSEEEEECT--TSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCCEEEEEEC--CCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 33 6777666665 7889999876532 2222311 111234456677787666544 6789999988753
No 160
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=51.89 E-value=1.1e+02 Score=26.04 Aligned_cols=140 Identities=6% Similarity=-0.017 Sum_probs=72.4
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEeCce-EEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCC----C
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESS----L 256 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~----~ 256 (376)
..+.+++..++.-...-.... ... .-.+.-+|. +|..... ...|..+|+.+.+. ..++.+...... .
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~-~~~-~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDL-KPF-GATINNTTQTLWFGNTV-----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESS-CCC-SEEEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred ccEEEEcCCCCeEEEEEecCC-Ccc-eEEECCCCCEEEEEecC-----CCEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 467777776654221111111 011 223344666 5554432 45899999987765 445554322110 0
Q ss_pred -ceEEEEE-CCe-EEEEEEecCCCEEEEEEecCCceeeEEEEcc-CCceeEeEEEeeCCc-EEEEecCCEEEEEECCCCC
Q 036621 257 -DVTLGIY-YQS-LSLLILDNVDHCFKIWVMRKKNWIKQLTVGP-FIGIFQPLLFWKKGA-FFVESNSSQLLLYEPGTGE 331 (376)
Q Consensus 257 -~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~~~~~-l~~~~~~~~~~~yd~~~~~ 331 (376)
...+... +|+ |++.... ....+.+|-++ ....+..+ + .......+.+..+++ +++...++.+..||+++++
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~-~~~~i~~~d~~--~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIG-KESVIWVVDGG--NIKLKTAI-QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEEEETTTTEEEEEEES-SSCEEEEEETT--TTEEEEEE-CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE
T ss_pred CCceEEECCCCCEEEEEecC-CCceEEEEcCC--CCceEEEe-cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe
Confidence 1233443 555 4444432 24566666554 34455556 4 222123345566666 4555556789999999886
Q ss_pred EE
Q 036621 332 LR 333 (376)
Q Consensus 332 ~~ 333 (376)
..
T Consensus 218 ~~ 219 (353)
T 3vgz_A 218 IL 219 (353)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 161
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.51 E-value=1.4e+02 Score=27.15 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=65.3
Q ss_pred eeEeC----ceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCe-EEEEEEecC-CCEEEEEE
Q 036621 211 RTYFD----GAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQS-LSLLILDNV-DHCFKIWV 283 (376)
Q Consensus 211 ~v~~~----G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~~~~~~~-~~~l~iW~ 283 (376)
.+.++ |.||+.... ..|..||+.+++...+.-+. . ....++.. +|+ |++...... .....+|.
T Consensus 141 ~lavdp~~~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~~--~--~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQ------HPTRLIDFEKEYVSTVYSGL--S--KVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp EEEEETTEEEEEEEEEBT------EEEEEEETTTTEEEEEECCC--S--CEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred EEEECCCCCCeEEEEeCC------CcEEEEECCCCEEEEEecCC--C--CcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 55554 889987642 68999999998776663211 1 12344443 566 777776322 23344555
Q ss_pred ecCCceeeEEEEccCCceeEeEEEee-CCcEEEEec-CCEEEEEECCCCCEE
Q 036621 284 MRKKNWIKQLTVGPFIGIFQPLLFWK-KGAFFVESN-SSQLLLYEPGTGELR 333 (376)
Q Consensus 284 l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~yd~~~~~~~ 333 (376)
..+..|.....+..+.. ..-+++.. ++.||+... ..+++.||++++...
T Consensus 211 ~~~g~~~~~~~l~~~~~-p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 211 TRESGFKVITELTKGQN-CNGAETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp EGGGTSCSEEEEEECSS-CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eCCCceeeeeeeccCCC-ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 55555654333311111 22244555 677777654 578999999987663
No 162
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=50.78 E-value=1.6e+02 Score=27.50 Aligned_cols=148 Identities=5% Similarity=0.005 Sum_probs=75.1
Q ss_pred eEEEecCCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEE
Q 036621 111 IVFIEGLNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYT 189 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (376)
+++.......+.+||..+++... ++.... .... ...+.+.+..+++-+..- .+ ..+.+|+
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~-~~~~------v~~~~~~~~~~~~l~~~~-----~d-------g~i~vwd 235 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHK-QGSF------VRDVEFSPDSGEFVITVG-----SD-------RKISCFD 235 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSC-TTCC------EEEEEECSTTCCEEEEEE-----TT-------CCEEEEE
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecccCC-CCce------EEEEEECCCCCCEEEEEe-----CC-------CeEEEEE
Confidence 45555566889999988876543 221111 0001 356667665344333322 22 4788888
Q ss_pred cCCCceEecc-CC--CccccCCcceeEe-CceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEEEEEC
Q 036621 190 LRTNSWKNLK-PI--DYTMRLSSERTYF-DGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTLGIYY 264 (376)
Q Consensus 190 s~t~~W~~~~-~~--p~~~~~~~~~v~~-~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~~ 264 (376)
..++.-...- .. .. ...-..+.+ +|.....+.. ...|..||+.+.+. ..+..+..........+...+
T Consensus 236 ~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (615)
T 1pgu_A 236 GKSGEFLKYIEDDQEPV--QGGIFALSWLDSQKFATVGA-----DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG 308 (615)
T ss_dssp TTTCCEEEECCBTTBCC--CSCEEEEEESSSSEEEEEET-----TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEE
T ss_pred CCCCCEeEEeccccccc--CCceEEEEEcCCCEEEEEcC-----CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCC
Confidence 8776532221 10 11 000112222 6665555543 45899999987654 334544211111122223336
Q ss_pred CeEEEEEEecCCCEEEEEEecC
Q 036621 265 QSLSLLILDNVDHCFKIWVMRK 286 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~ 286 (376)
|...++... +..+.+|.+..
T Consensus 309 ~~~l~~~~~--~g~i~~~d~~~ 328 (615)
T 1pgu_A 309 NGRIISLSL--DGTLNFYELGH 328 (615)
T ss_dssp TTEEEEEET--TSCEEEEETTE
T ss_pred CCeEEEEEC--CCCEEEEECCC
Confidence 666665555 67888888765
No 163
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=50.64 E-value=1.4e+02 Score=28.60 Aligned_cols=114 Identities=11% Similarity=0.104 Sum_probs=59.1
Q ss_pred cceeEeCceEEEEecccCCCCceEEEEEEc-Cc--cceeeecCCCCC--C-----CCCceEEEEECCeEEEEEEecCCCE
Q 036621 209 SERTYFDGAFYWLLKLENDNDSYVILSFNM-AD--EKFQEIQGPCIL--E-----SSLDVTLGIYYQSLSLLILDNVDHC 278 (376)
Q Consensus 209 ~~~v~~~G~lYwl~~~~~~~~~~~il~fD~-~~--~~~~~i~~P~~~--~-----~~~~~~l~~~~G~L~~~~~~~~~~~ 278 (376)
..+++.+|.+|..... ...+.++|. .+ +.|+. +.+... . ......++..+|++++... +..
T Consensus 56 ~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~ 126 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGH 126 (571)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSE
T ss_pred cccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CCE
Confidence 4478899999998741 347999998 55 44543 222210 0 0001223445676665533 233
Q ss_pred EEEEEecC--CceeeEEEEccC--CceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEE
Q 036621 279 FKIWVMRK--KNWIKQLTVGPF--IGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELR 333 (376)
Q Consensus 279 l~iW~l~~--~~W~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~ 333 (376)
+...-.+. ..|+....-.+. .....|.. .++.|++... ++.++.||.+|++..
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 33333322 456543210000 11123332 3466666544 578999999998754
No 164
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=50.57 E-value=1.2e+02 Score=25.88 Aligned_cols=194 Identities=8% Similarity=-0.012 Sum_probs=95.4
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|-|.+.. ...+++.+||.++....++... . ..++.+++..+ . +... ...+ . ..+..
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~-----~------p~gia~~~dG~-l--~vad--~~~~----~--~~v~~ 99 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHATVEG-----K------VSGLAFTSNGD-L--VATG--WNAD----S--IPVVS 99 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEECSS-----E------EEEEEECTTSC-E--EEEE--ECTT----S--CEEEE
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEeCCC-----C------ceeEEEcCCCc-E--EEEe--ccCC----c--ceEEE
Confidence 56665555 5678999999876443332211 1 35777776533 2 2221 1111 0 24666
Q ss_pred EEcCCCceEeccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeee---c-----CCCCCCCCCce
Q 036621 188 YTLRTNSWKNLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI---Q-----GPCILESSLDV 258 (376)
Q Consensus 188 yss~t~~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i---~-----~P~~~~~~~~~ 258 (376)
|+..++..+.+...+. .+.+ ...+.-+|.+|..... ...|..+|..+.+.+.. . .+... .....
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~-g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~-~~~pn 172 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLN-GITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESV-FPAAN 172 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEE-EEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCC-SCSEE
T ss_pred EcCCCCeEEEEEeCCCccccC-cccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCC-CCcCC
Confidence 7767777665543332 1111 1111224455654322 45889999876432221 0 11110 01123
Q ss_pred EEEEECCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeCCcEEEEec-CCEEEEEECCCCCEEEE
Q 036621 259 TLGIYYQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 259 ~l~~~~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~~v 335 (376)
.+..-++.|++.... ...+..+.++. ........+... ....-+++..+|.+++... ..++..||++ ++...+
T Consensus 173 gis~dg~~lyv~d~~--~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 173 GLKRFGNFLYVSNTE--KMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp EEEEETTEEEEEETT--TTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEE
T ss_pred CcCcCCCEEEEEeCC--CCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEE
Confidence 343334467776664 56666666653 222111111011 1123366677888877654 5679999997 444443
No 165
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=50.43 E-value=1.3e+02 Score=26.51 Aligned_cols=192 Identities=14% Similarity=0.136 Sum_probs=92.6
Q ss_pred eceEEEe-cCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIE-GLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~-~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|-.++. .....+.|||..+++....-.. .... ...+.+.+.. ++ ++.. . .+ ..+.+
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~---h~~~------v~~~~~~p~~-~~-l~s~-s---~d-------~~v~i 191 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQG---HEQD------IYSLDYFPSG-DK-LVSG-S---GD-------RTVRI 191 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC---CSSC------EEEEEECTTS-SE-EEEE-E---TT-------SEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcc---CCCC------EEEEEEcCCC-CE-EEEe-c---CC-------CcEEE
Confidence 4544433 4567899999988875543111 1111 3466666543 22 2222 1 22 47888
Q ss_pred EEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCC-CCC-C-ceEE
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCIL-ESS-L-DVTL 260 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~-~~~-~-~~~l 260 (376)
++.+++.-...-..... -..+.+ +|.+...+.. ...|..||+.+.+... +..+... ..+ . -..+
T Consensus 192 wd~~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~s~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 192 WDLRTGQCSLTLSIEDG----VTTVAVSPGDGKYIAAGSL-----DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp EETTTTEEEEEEECSSC----EEEEEECSTTCCEEEEEET-----TSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred EECCCCeeEEEEEcCCC----cEEEEEECCCCCEEEEEcC-----CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 88877654322111110 001111 4554444433 4468888988765432 2222111 111 1 2223
Q ss_pred EEE-CCeEEEEEEecCCCEEEEEEecCCc----------eeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECC
Q 036621 261 GIY-YQSLSLLILDNVDHCFKIWVMRKKN----------WIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPG 328 (376)
Q Consensus 261 ~~~-~G~L~~~~~~~~~~~l~iW~l~~~~----------W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~ 328 (376)
.-. +|++.+.... +..+.||.+.... ......+........-+++..++..++. ..++.+.+||.+
T Consensus 263 ~~~~~g~~l~s~s~--d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 263 VFTRDGQSVVSGSL--DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp EECTTSSEEEEEET--TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred EECCCCCEEEEEeC--CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 332 5666555555 7899999987611 1111111011111233445556665544 447789999999
Q ss_pred CCCEE
Q 036621 329 TGELR 333 (376)
Q Consensus 329 ~~~~~ 333 (376)
+++..
T Consensus 341 ~~~~~ 345 (393)
T 1erj_A 341 SGNPL 345 (393)
T ss_dssp TCCEE
T ss_pred CCeEE
Confidence 87643
No 166
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=50.28 E-value=1.2e+02 Score=25.90 Aligned_cols=110 Identities=12% Similarity=0.001 Sum_probs=65.2
Q ss_pred eEeCceEEEEecccCCCCceEEEEEEcCccce-eeecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCcee
Q 036621 212 TYFDGAFYWLLKLENDNDSYVILSFNMADEKF-QEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWI 290 (376)
Q Consensus 212 v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~ 290 (376)
...++.+|-+... ...+.+||..+.+- ..++.+.. ...|+.-+++|++... .. .|+.++-+.=.
T Consensus 102 t~~g~~Ly~ltw~-----~~~v~V~D~~Tl~~~~ti~~~~e-----GwGLt~Dg~~L~vSdG---s~--~l~~iDp~T~~ 166 (268)
T 3nok_A 102 ASDGERLYQLTWT-----EGLLFTWSGMPPQRERTTRYSGE-----GWGLCYWNGKLVRSDG---GT--MLTFHEPDGFA 166 (268)
T ss_dssp EECSSCEEEEESS-----SCEEEEEETTTTEEEEEEECSSC-----CCCEEEETTEEEEECS---SS--EEEEECTTTCC
T ss_pred EEeCCEEEEEEcc-----CCEEEEEECCcCcEEEEEeCCCc-----eeEEecCCCEEEEECC---CC--EEEEEcCCCCe
Confidence 3445688877654 56999999987543 45565532 2345555666776653 33 56677664445
Q ss_pred eEEEEccCCce----eEe--EEEeeCCcEEEEec-CCEEEEEECCCCCE-EEEEEe
Q 036621 291 KQLTVGPFIGI----FQP--LLFWKKGAFFVESN-SSQLLLYEPGTGEL-RDFELE 338 (376)
Q Consensus 291 ~~~~i~~~~~~----~~~--~~~~~~~~l~~~~~-~~~~~~yd~~~~~~-~~v~~~ 338 (376)
.+.+| ....- ..+ +. ..+|.++.... +..+.+.|++|++. +.+...
T Consensus 167 v~~~I-~V~~~g~~v~~lNeLe-~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 167 LVGAV-QVKLRGQPVELINELE-CANGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEEEE-ECEETTEECCCEEEEE-EETTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred EEEEE-EeCCCCcccccccccE-EeCCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 55666 33221 011 11 23677776654 56799999999875 455543
No 167
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=48.91 E-value=1.2e+02 Score=25.50 Aligned_cols=64 Identities=9% Similarity=0.173 Sum_probs=39.2
Q ss_pred CeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCC---cEEEE-ecCCEEEEEECCCC
Q 036621 265 QSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKG---AFFVE-SNSSQLLLYEPGTG 330 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~---~l~~~-~~~~~~~~yd~~~~ 330 (376)
+++.+.... +..+.||.+.. ..|.....+........-+.+..++ .++.. ..++.+.++|.++.
T Consensus 170 ~~~l~sgs~--D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEcC--CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 344444444 78899999877 5677777772222223445555543 44443 44677999998764
No 168
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=48.68 E-value=2.6e+02 Score=29.26 Aligned_cols=189 Identities=12% Similarity=0.121 Sum_probs=94.7
Q ss_pred eceEEE-ecCCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 109 CGIVFI-EGLNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 109 ~Gll~~-~~~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
+|-+++ ....+.+.|||..|++... +.. .... ..++.+.+.. ++ +..+. .+ ..+.
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~----h~~~------v~~~~~s~~~-~~--l~s~~---~d-------~~v~ 682 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKA----HEDE------VLCCAFSSDD-SY--IATCS---AD-------KKVK 682 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECC----CSSC------EEEEEECTTS-SE--EEEEE---TT-------SEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEecc----CCCC------EEEEEEecCC-CE--EEEEe---CC-------CeEE
Confidence 443333 3456789999999987543 321 1111 3466666532 33 22211 22 4788
Q ss_pred EEEcCCCceEec-cCCCccccCCcceeEe----CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 187 VYTLRTNSWKNL-KPIDYTMRLSSERTYF----DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 187 vyss~t~~W~~~-~~~p~~~~~~~~~v~~----~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
+++..++.-... ...... -.++.+ ++.+...+. ....|..+|+.+.+.... +..+... -..+.
T Consensus 683 vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~sg~-----~d~~v~vwd~~~~~~~~~-~~~h~~~--v~~~~ 750 (1249)
T 3sfz_A 683 IWDSATGKLVHTYDEHSEQ----VNCCHFTNKSNHLLLATGS-----NDFFLKLWDLNQKECRNT-MFGHTNS--VNHCR 750 (1249)
T ss_dssp EEETTTCCEEEEEECCSSC----EEEEEECSSSSCCEEEEEE-----TTSCEEEEETTSSSEEEE-ECCCSSC--EEEEE
T ss_pred EEECCCCceEEEEcCCCCc----EEEEEEecCCCceEEEEEe-----CCCeEEEEECCCcchhhe-ecCCCCC--EEEEE
Confidence 898887643221 111110 001111 222222222 245788899887764332 1111111 12233
Q ss_pred EE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEcc--------C---CceeEeEEEeeCCcEEEEecCCEEEEEECCC
Q 036621 262 IY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGP--------F---IGIFQPLLFWKKGAFFVESNSSQLLLYEPGT 329 (376)
Q Consensus 262 ~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~--------~---~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~ 329 (376)
.. +|+..+.... +..+.+|.+....-........ . ......+++..+++.++...++.+..||..+
T Consensus 751 ~sp~~~~l~s~s~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~ 828 (1249)
T 3sfz_A 751 FSPDDELLASCSA--DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHT 828 (1249)
T ss_dssp ECSSTTEEEEEES--SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTT
T ss_pred EecCCCEEEEEEC--CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecC
Confidence 33 5666666555 7889999987732222111100 0 0012223445677777666678899999888
Q ss_pred CCEEE
Q 036621 330 GELRD 334 (376)
Q Consensus 330 ~~~~~ 334 (376)
+....
T Consensus 829 ~~~~~ 833 (1249)
T 3sfz_A 829 SGLLA 833 (1249)
T ss_dssp CCEEE
T ss_pred CCcee
Confidence 76543
No 169
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=48.63 E-value=33 Score=25.39 Aligned_cols=39 Identities=10% Similarity=0.218 Sum_probs=29.3
Q ss_pred CeEEEEecCcc-cceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEE
Q 036621 119 NRITLWNIATR-ESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLI 168 (376)
Q Consensus 119 ~~~~v~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~ 168 (376)
-.++.+||.|+ .|+..-... . .+.+.+|+..+.|+|+.+
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~-----~------~V~~~~d~~~~~yRIv~~ 50 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA-----V------TVSYFYDSTRNVYRIISL 50 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC-----E------EEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc-----e------EEEEEEcCCCCEEEEEEc
Confidence 46889999996 897543221 1 467888998889999986
No 170
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=47.94 E-value=1.6e+02 Score=26.81 Aligned_cols=113 Identities=13% Similarity=0.185 Sum_probs=62.7
Q ss_pred cceeEeC-----ceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCC-CEEEE
Q 036621 209 SERTYFD-----GAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVD-HCFKI 281 (376)
Q Consensus 209 ~~~v~~~-----G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~-~~l~i 281 (376)
..++.++ |.|||.... ..|..+|+.+.+...+..+.. ....++.. +|+|++....... ..-.+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~g~v~~~~~~~~----~P~giavd~dG~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR------DAFRHVDFVNQYVDIKTTNIG----QCADVNFTLNGDMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT------SCEEEEETTTTEEEEECCCCS----CEEEEEECTTCCEEEEECCSCTTSEEEE
T ss_pred CceEEEccccCCCEEEEEeCC------CCEEEEECCCCEEEEeecCCC----CccEEEECCCCCEEEEcCCCCcccceEE
Confidence 3467776 899997642 589999998887776632111 12334443 6777777653111 22233
Q ss_pred EEecCCceeeEEEEccCCceeEeEEEee-CCcEEEEec-CCEEEEEECCCCCE
Q 036621 282 WVMRKKNWIKQLTVGPFIGIFQPLLFWK-KGAFFVESN-SSQLLLYEPGTGEL 332 (376)
Q Consensus 282 W~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~yd~~~~~~ 332 (376)
+...+..|.....+..+.. ..-+++.. ++.||+... +.++..||+++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~-P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 211 LFTRASGFTERLSLCNARG-AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EECGGGTTCCEEEEEECSS-BCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred EEECCCCeeccccccccCC-CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 3333344432222311111 12244455 677777654 46799999987766
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=46.47 E-value=2.1e+02 Score=27.71 Aligned_cols=189 Identities=17% Similarity=0.077 Sum_probs=96.3
Q ss_pred eEEEEecCcccce--ecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEe
Q 036621 120 RITLWNIATRESI--TLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKN 197 (376)
Q Consensus 120 ~~~v~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (376)
++++++.-|++.. .+-..+. .... ..+..+.+. ++|-++.... .. .. ..+.+.+..++.|+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~--~~~~-----~~~~~~SpD-G~~l~~~~~~---~~---~~--~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTG--DPTT-----FLQSDLSRD-GKYLFVYILR---GW---SE--NDVYWKRPGEKDFRL 266 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCC--CTTC-----EEEEEECTT-SCCEEEEEEE---TT---TE--EEEEEECTTCSSCEE
T ss_pred EEEEEECCCCchhceEEEecCC--CCEE-----EEEEEECCC-CCEEEEEEeC---CC---Cc--eEEEEEcCCCCceEE
Confidence 4899998887632 2211111 1111 234455443 3554444322 21 11 455666555667776
Q ss_pred ccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccc---eeeecCCCCCCCCCceEEEEECCeEEEEEEec
Q 036621 198 LKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEK---FQEIQGPCILESSLDVTLGIYYQSLSLLILDN 274 (376)
Q Consensus 198 ~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~---~~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~ 274 (376)
+..-.. .. ...+.-+|.+|+....+. ....|..+|+.+.. |..+-.+.... ....+...+|.|.+....
T Consensus 267 l~~~~~--~~-~~~~~~~g~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~l~~~~~~~~~lv~~~~~- 338 (695)
T 2bkl_A 267 LVKGVG--AK-YEVHAWKDRFYVLTDEGA--PRQRVFEVDPAKPARASWKEIVPEDSSA--SLLSVSIVGGHLSLEYLK- 338 (695)
T ss_dssp EEECSS--CC-EEEEEETTEEEEEECTTC--TTCEEEEEBTTBCSGGGCEEEECCCSSC--EEEEEEEETTEEEEEEEE-
T ss_pred eecCCC--ce-EEEEecCCcEEEEECCCC--CCCEEEEEeCCCCCccCCeEEecCCCCC--eEEEEEEECCEEEEEEEE-
Confidence 652111 01 123334666666654321 35689999997654 66653222111 112234458888777776
Q ss_pred CCCEEEEEEecC-CceeeEEEEccCCce--eEeEEEeeCCc-EEEEec----CCEEEEEECCCCCEEEEE
Q 036621 275 VDHCFKIWVMRK-KNWIKQLTVGPFIGI--FQPLLFWKKGA-FFVESN----SSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 275 ~~~~l~iW~l~~-~~W~~~~~i~~~~~~--~~~~~~~~~~~-l~~~~~----~~~~~~yd~~~~~~~~v~ 336 (376)
+...+||+++- .. ....+ ..... ...+.+..+++ +++... ...++.||+++++.+.+.
T Consensus 339 -dg~~~l~~~~~~g~--~~~~l-~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 339 -DATSEVRVATLKGK--PVRTV-QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp -TTEEEEEEEETTCC--EEEEC-CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred -CCEEEEEEEeCCCC--eeEEe-cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 66778888763 22 33445 33311 11222233454 554433 246999999998877664
No 172
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=46.11 E-value=1.3e+02 Score=25.21 Aligned_cols=183 Identities=9% Similarity=0.043 Sum_probs=90.3
Q ss_pred ecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCc
Q 036621 115 EGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNS 194 (376)
Q Consensus 115 ~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~ 194 (376)
......+.+||..+++....-.. .... ...+.+.+.. .+ +..+. .+ ..+.+|+.+++.
T Consensus 41 ~~~dg~i~iw~~~~~~~~~~~~~---h~~~------v~~~~~~~~~-~~--l~s~~---~d-------~~i~vwd~~~~~ 98 (312)
T 4ery_A 41 SSADKLIKIWGAYDGKFEKTISG---HKLG------ISDVAWSSDS-NL--LVSAS---DD-------KTLKIWDVSSGK 98 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECC---CSSC------EEEEEECTTS-SE--EEEEE---TT-------SEEEEEETTTCC
T ss_pred eeCCCeEEEEeCCCcccchhhcc---CCCc------eEEEEEcCCC-CE--EEEEC---CC-------CEEEEEECCCCc
Confidence 33556788999888776543211 1111 3456666532 22 22221 22 478888887654
Q ss_pred eEe-ccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEE
Q 036621 195 WKN-LKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLIL 272 (376)
Q Consensus 195 W~~-~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~ 272 (376)
-.. ......... .....-+|.+...+.. ...|..+|+.+.+... .++.+... -..+... +|++.+...
T Consensus 99 ~~~~~~~~~~~v~--~~~~~~~~~~l~s~~~-----d~~i~iwd~~~~~~~~-~~~~~~~~--v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 99 CLKTLKGHSNYVF--CCNFNPQSNLIVSGSF-----DESVRIWDVKTGKCLK-TLPAHSDP--VSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp EEEEEECCSSCEE--EEEECSSSSEEEEEET-----TSCEEEEETTTCCEEE-EECCCSSC--EEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCCEE--EEEEcCCCCEEEEEeC-----CCcEEEEECCCCEEEE-EecCCCCc--EEEEEEcCCCCEEEEEe
Confidence 211 111100000 0001113333333322 4478889988765422 22222111 1222222 577666666
Q ss_pred ecCCCEEEEEEecCCceeeEEEEc-cCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEE
Q 036621 273 DNVDHCFKIWVMRKKNWIKQLTVG-PFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELR 333 (376)
Q Consensus 273 ~~~~~~l~iW~l~~~~W~~~~~i~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~ 333 (376)
. +..+.+|.+....- +..+. ........+.+..++..++. ..++.+.+||.++++..
T Consensus 169 ~--d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 169 Y--DGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp T--TSCEEEEETTTCCE--EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred C--CCcEEEEECCCCce--eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 5 67899999876322 22331 11112334555666765544 45788999999987643
No 173
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=45.20 E-value=1.7e+02 Score=28.86 Aligned_cols=55 Identities=15% Similarity=0.233 Sum_probs=33.4
Q ss_pred eeEe---CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEE
Q 036621 211 RTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLIL 272 (376)
Q Consensus 211 ~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~ 272 (376)
++.+ +|.|||.... ...|.++|+....-..+ ..+..... ...|+..++.|+++..
T Consensus 544 Glavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~--P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAH--PFSLAVFEDKVFWTDI 602 (699)
T ss_dssp CEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSS--CCCCEEETTEEEEECS
T ss_pred EEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCC--ceEeEEECCEEEEEeC
Confidence 5555 4899998754 56899999976544444 32222211 2334556677777764
No 174
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=44.92 E-value=1.5e+02 Score=25.49 Aligned_cols=98 Identities=11% Similarity=0.034 Sum_probs=54.5
Q ss_pred ceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeE
Q 036621 230 SYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPL 305 (376)
Q Consensus 230 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~ 305 (376)
...|..+|..+.+.. .++..... ...+.-. +|++.+.... +..+.||.+.. ........+.........+
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~ 149 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLRSSW----VMTCAYAPSGNYVACGGL--DNICSIYNLKTREGNVRVSRELAGHTGYLSCC 149 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECSSSC----EEEEEECTTSSEEEEEET--TCEEEEEETTTCSBSCEEEEEEECCSSCEEEE
T ss_pred CCcEEEEECCCCCcceEeecCCcc----EEEEEECCCCCEEEEEeC--CCeEEEEECccCCCcceeEEEecCCCccEEEE
Confidence 347788887665432 22322111 1222222 5666555555 78999999876 3334444441222223334
Q ss_pred EEeeCCcEEEEecCCEEEEEECCCCCEE
Q 036621 306 LFWKKGAFFVESNSSQLLLYEPGTGELR 333 (376)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~~yd~~~~~~~ 333 (376)
.+..++.++....++.+.+||+++++..
T Consensus 150 ~~~~~~~l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 150 RFLDDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred EECCCCcEEEEECCCcEEEEECCCCcEE
Confidence 4456666666666788999999887543
No 175
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=44.84 E-value=1.4e+02 Score=25.09 Aligned_cols=97 Identities=6% Similarity=-0.062 Sum_probs=51.8
Q ss_pred ceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE-CCe-EEEEEEecCCCEEEEEEecCCceeeEEEEccCCc------
Q 036621 230 SYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG------ 300 (376)
Q Consensus 230 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~------ 300 (376)
...|..+|+.+.+.. .+..+..... ...+... +|+ |++.... ...+.+|-++..+ .+..+ +...
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~--~~~~~-~~~~~~~~~~ 82 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPT--PMVPMVAPGGRIAYATVNK--SESLVKIDLVTGE--TLGRI-DLSTPEERVK 82 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTC--CCCEEECTTSSEEEEEETT--TTEEEEEETTTCC--EEEEE-ECCBTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCC--ccceEEcCCCCEEEEEeCC--CCeEEEEECCCCC--eEeeE-EcCCcccccc
Confidence 457888998876543 3455441100 1123333 564 4444433 5678888776533 22333 2211
Q ss_pred eeEeEEEeeCCcEEEEe-------------cCCEEEEEECCCCCEE
Q 036621 301 IFQPLLFWKKGAFFVES-------------NSSQLLLYEPGTGELR 333 (376)
Q Consensus 301 ~~~~~~~~~~~~l~~~~-------------~~~~~~~yd~~~~~~~ 333 (376)
...-+.+..+++.++.. .+..+.+||+++++..
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 12235556667544433 3578999999887654
No 176
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=44.76 E-value=1.7e+02 Score=26.20 Aligned_cols=95 Identities=14% Similarity=0.216 Sum_probs=60.8
Q ss_pred ceEEEEEEcCccceee-ecCCCCCCCCCceEEEEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe
Q 036621 230 SYVILSFNMADEKFQE-IQGPCILESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (376)
...|..||+.+.+... +.. +.. .......+|+..+.... +..+.+|.+.... ..... .........++.
T Consensus 331 dg~i~vwd~~~~~~~~~~~~--h~~---~v~~~~~~~~~l~s~s~--dg~v~vwd~~~~~--~~~~~-~~~~~~~~~~~~ 400 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQG--HTA---LVGLLRLSDKFLVSAAA--DGSIRGWDANDYS--RKFSY-HHTNLSAITTFY 400 (464)
T ss_dssp TSCEEEEETTTTEEEEEECC--CSS---CEEEEEECSSEEEEEET--TSEEEEEETTTCC--EEEEE-ECTTCCCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEeC--CCC---cEEEEEEcCCEEEEEeC--CCcEEEEECCCCc--eeeee-cCCCCccEEEEE
Confidence 4578899987765322 222 111 23334456766565555 7899999988732 22333 233334556777
Q ss_pred eCCcEEEEecCCEEEEEECCCCCEEE
Q 036621 309 KKGAFFVESNSSQLLLYEPGTGELRD 334 (376)
Q Consensus 309 ~~~~l~~~~~~~~~~~yd~~~~~~~~ 334 (376)
.++.+++...++.+.+||.++++...
T Consensus 401 ~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 401 VSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp ECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred eCCCEEEEecCCeEEEEECCCCcEEe
Confidence 88888877778899999999987654
No 177
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=44.32 E-value=1.1e+02 Score=29.94 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=60.0
Q ss_pred cceeEeCceEEEEecccCCCCceEEEEEEcCcc--ceeee-cCCCCC-----CCCCceEEEEECCeEEEEEEecCCCEEE
Q 036621 209 SERTYFDGAFYWLLKLENDNDSYVILSFNMADE--KFQEI-QGPCIL-----ESSLDVTLGIYYQSLSLLILDNVDHCFK 280 (376)
Q Consensus 209 ~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~--~~~~i-~~P~~~-----~~~~~~~l~~~~G~L~~~~~~~~~~~l~ 280 (376)
..+++.+|.+|.... ...|.++|..+. .|+.- ..+... .......++..+|+|++... +..+.
T Consensus 71 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~l~ 141 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGRLI 141 (677)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSEEE
T ss_pred eCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC---CCEEE
Confidence 447889999999874 347999998754 45432 211110 00011233445676666533 34444
Q ss_pred EEEecC--CceeeEEEEcc---CCceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEE
Q 036621 281 IWVMRK--KNWIKQLTVGP---FIGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELR 333 (376)
Q Consensus 281 iW~l~~--~~W~~~~~i~~---~~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~ 333 (376)
.+-.+. ..|+.....+. ......|+. .++.+++... ++.++.||.+|++..
T Consensus 142 alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 444433 55665321000 011122332 3455666443 467999999998754
No 178
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.31 E-value=1.5e+02 Score=25.42 Aligned_cols=195 Identities=7% Similarity=0.001 Sum_probs=97.1
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|.+.+.. ....++++||.+++...++.+. . ..++..++.. . ++.. . . ..+.+
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~------v~~i~~~~dg-~--l~v~-~---~--------~gl~~ 113 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPF-----M------GSALAKISDS-K--QLIA-S---D--------DGLFL 113 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSS-----C------EEEEEEEETT-E--EEEE-E---T--------TEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCC-----c------ceEEEEeCCC-e--EEEE-E---C--------CCEEE
Confidence 45554444 4578999999998766543221 1 2455555432 2 2222 1 1 35778
Q ss_pred EEcCCCceEeccCCCc----cccCCcceeEeCceEEEEecccC-CCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE
Q 036621 188 YTLRTNSWKNLKPIDY----TMRLSSERTYFDGAFYWLLKLEN-DNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI 262 (376)
Q Consensus 188 yss~t~~W~~~~~~p~----~~~~~~~~v~~~G~lYwl~~~~~-~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~ 262 (376)
|+..++..+.+...+. ...+ .-.+--+|.+|+-..... ......|..+| +.+...+. .... ....++.
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~--~~~~i~~ 186 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADIS--IPNSICF 186 (326)
T ss_dssp EETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEES--SEEEEEE
T ss_pred EECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCc--ccCCeEE
Confidence 8887877766543221 1111 111222677655332110 01246788998 45554432 1111 1223443
Q ss_pred E-CCe-EEEEEEecCCCEEEEEEec--CC-ceee---EEEEccCCceeEeEEEeeCCcEEEEec-CCEEEEEECCCCCEE
Q 036621 263 Y-YQS-LSLLILDNVDHCFKIWVMR--KK-NWIK---QLTVGPFIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGTGELR 333 (376)
Q Consensus 263 ~-~G~-L~~~~~~~~~~~l~iW~l~--~~-~W~~---~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~ 333 (376)
. +|+ |++.... ...+.+|.++ .. .... ...+........-+++..+|.+++... ++.+..||++++..+
T Consensus 187 s~dg~~lyv~~~~--~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~ 264 (326)
T 2ghs_A 187 SPDGTTGYFVDTK--VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIA 264 (326)
T ss_dssp CTTSCEEEEEETT--TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEE
T ss_pred cCCCCEEEEEECC--CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEE
Confidence 3 564 5555433 4566667665 22 2211 122210111223344556677777653 578999999766666
Q ss_pred EEEEe
Q 036621 334 DFELE 338 (376)
Q Consensus 334 ~v~~~ 338 (376)
.+...
T Consensus 265 ~i~~~ 269 (326)
T 2ghs_A 265 RYEVP 269 (326)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 66543
No 179
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=44.00 E-value=1.5e+02 Score=25.14 Aligned_cols=145 Identities=8% Similarity=0.002 Sum_probs=69.4
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCC--CCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILE--SSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~--~~~~~~ 259 (376)
..+.+++..++.....-..+.........+.-+|...++... ....|..+|+.+.+.. .++.+.... ......
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~----~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~ 96 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN----HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYS 96 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET----TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSC
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC----CCCcEEEEeCCCCcEEEEEEcccccccccccccc
Confidence 478888887765432211111001001122235654333333 2458999999876653 345543210 000112
Q ss_pred EEEE-CCeEEEEEEec----------CCCEEEEEEecCCc-eeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEEC
Q 036621 260 LGIY-YQSLSLLILDN----------VDHCFKIWVMRKKN-WIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEP 327 (376)
Q Consensus 260 l~~~-~G~L~~~~~~~----------~~~~l~iW~l~~~~-W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~ 327 (376)
+... +|+..++.... ....+.+|-++... =..+... .......-+.+..++++++ . +..+..+|+
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~l~~-~-~~~i~~~d~ 173 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGSLYV-A-GPDIYKMDV 173 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSCEEE-E-SSSEEEECT
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCcEEE-c-cCcEEEEeC
Confidence 3333 56644444421 13678888876611 1111222 1111122344667777554 3 334999999
Q ss_pred CCCCEEE
Q 036621 328 GTGELRD 334 (376)
Q Consensus 328 ~~~~~~~ 334 (376)
++++...
T Consensus 174 ~~~~~~~ 180 (349)
T 1jmx_B 174 KTGKYTV 180 (349)
T ss_dssp TTCCEEE
T ss_pred CCCceec
Confidence 9887543
No 180
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=43.26 E-value=1.8e+02 Score=25.87 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=54.1
Q ss_pred ceEEEEEEcCccce-eeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEE
Q 036621 230 SYVILSFNMADEKF-QEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLF 307 (376)
Q Consensus 230 ~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (376)
...|..+|+.+.+. ..+..+.+... -..+... +|++.+.... +..+.||-+.... .+..+ ....-..+.++
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~--v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~--~~~~~-~~~~~~~v~~~ 263 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGA--VSSICIDEECCVLILGTT--RGIIDIWDIRFNV--LIRSW-SFGDHAPITHV 263 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCC--EEEEEECTTSCEEEEEET--TSCEEEEETTTTE--EEEEE-BCTTCEEEEEE
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCc--eEEEEECCCCCEEEEEcC--CCeEEEEEcCCcc--EEEEE-ecCCCCceEEE
Confidence 46899999987654 33354422221 2233333 5676666666 6789999987632 23333 21111122222
Q ss_pred ------eeCCcEEEEec-CCEEEEEECCCCCEEE
Q 036621 308 ------WKKGAFFVESN-SSQLLLYEPGTGELRD 334 (376)
Q Consensus 308 ------~~~~~l~~~~~-~~~~~~yd~~~~~~~~ 334 (376)
..++.+++... ++.+.+||.++++...
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQY 297 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEE
Confidence 12344555444 5679999999876443
No 181
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=42.82 E-value=1.5e+02 Score=24.82 Aligned_cols=65 Identities=0% Similarity=-0.063 Sum_probs=37.2
Q ss_pred CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCC----cEEEE-ecCCEEEEEECCCCC
Q 036621 265 QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKG----AFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~----~l~~~-~~~~~~~~yd~~~~~ 331 (376)
+.+.++... +..+.+|.........+..+........-+.+..++ .+++. ..++.+.+||++++.
T Consensus 182 ~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 182 PEKLAVSAL--EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp CCEEEEEET--TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred CcEEEEecC--CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 565555554 455655555556666666552222223445555665 55444 446789999988753
No 182
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=42.56 E-value=1.7e+02 Score=25.42 Aligned_cols=181 Identities=10% Similarity=0.105 Sum_probs=88.1
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
.|+.......+.+||..+++...--.. .... ...+.+.+..+.-.++.. . .+ ..+.+++.
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~---h~~~------v~~~~~~~~~~g~~l~sg-s---~D-------g~v~~wd~ 227 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHG---HGAD------VLCLDLAPSETGNTFVSG-G---CD-------KKAMVWDM 227 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC---CSSC------EEEEEECCCSSCCEEEEE-E---TT-------SCEEEEET
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcC---CCCC------eEEEEEEeCCCCCEEEEE-e---CC-------CeEEEEEC
Confidence 444444668899999988875432110 1111 234555554322223322 1 22 47888888
Q ss_pred CCCceEec-cCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE-CC
Q 036621 191 RTNSWKNL-KPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-YQ 265 (376)
Q Consensus 191 ~t~~W~~~-~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-~G 265 (376)
+++..... ...... -.++.+ +|.....+.. ...|..||+.+.+-..+ ........ ...+.-. +|
T Consensus 228 ~~~~~~~~~~~h~~~----v~~v~~~p~~~~l~s~s~-----D~~v~lwd~~~~~~~~~~~~~~~~~~--~~~~~~s~~g 296 (354)
T 2pbi_B 228 RSGQCVQAFETHESD----VNSVRYYPSGDAFASGSD-----DATCRLYDLRADREVAIYSKESIIFG--ASSVDFSLSG 296 (354)
T ss_dssp TTCCEEEEECCCSSC----EEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECCTTCCSC--EEEEEECTTS
T ss_pred CCCcEEEEecCCCCC----eEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCcEEEEEcCCCcccc--eeEEEEeCCC
Confidence 77653221 111110 112222 4544444332 44788899877643322 22111111 1222222 67
Q ss_pred eEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEE
Q 036621 266 SLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYE 326 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd 326 (376)
++.++... +..+.||.+... ..+..+........-+++..++..++. ..++.+.+|+
T Consensus 297 ~~l~~g~~--d~~i~vwd~~~~--~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 297 RLLFAGYN--DYTINVWDVLKG--SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SEEEEEET--TSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CEEEEEEC--CCcEEEEECCCC--ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 77666665 778999987552 233344112222344556666765544 3466666654
No 183
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=42.46 E-value=1.5e+02 Score=24.70 Aligned_cols=59 Identities=12% Similarity=0.268 Sum_probs=37.2
Q ss_pred CCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCEEE
Q 036621 276 DHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGELRD 334 (376)
Q Consensus 276 ~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~~~ 334 (376)
+.++.||-++..+-.+............-+++..+++.++. ..++.+.+||.++++...
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 67899998877544444443111222344556667776554 447889999999986543
No 184
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=42.25 E-value=1.6e+02 Score=28.93 Aligned_cols=114 Identities=12% Similarity=0.168 Sum_probs=60.5
Q ss_pred cceeEeCceEEEEecccCCCCceEEEEEEcCc--cceeee-cCCCCCC-----CCCceEEEEECCeEEEEEEecCCCEEE
Q 036621 209 SERTYFDGAFYWLLKLENDNDSYVILSFNMAD--EKFQEI-QGPCILE-----SSLDVTLGIYYQSLSLLILDNVDHCFK 280 (376)
Q Consensus 209 ~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~~-----~~~~~~l~~~~G~L~~~~~~~~~~~l~ 280 (376)
..+++.+|.+|..... ..|.++|..+ +.|+.- ..+.... ......++..+|+|++... +..+.
T Consensus 64 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg~l~ 134 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DGRLE 134 (689)
T ss_dssp CCCEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEE
T ss_pred ecCEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---CCEEE
Confidence 4478899999997743 4799999865 456542 2221100 0001223445676665442 34444
Q ss_pred EEEecC--CceeeEEEEccC---CceeEeEEEeeCCcEEEEec------CCEEEEEECCCCCEE
Q 036621 281 IWVMRK--KNWIKQLTVGPF---IGIFQPLLFWKKGAFFVESN------SSQLLLYEPGTGELR 333 (376)
Q Consensus 281 iW~l~~--~~W~~~~~i~~~---~~~~~~~~~~~~~~l~~~~~------~~~~~~yd~~~~~~~ 333 (376)
.+-.+. ..|+.....++. .....|+. .++.+++... ++.++.||.+|++..
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 444433 567654321111 01123332 3456665432 467999999998744
No 185
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=41.72 E-value=1.9e+02 Score=25.74 Aligned_cols=63 Identities=16% Similarity=0.239 Sum_probs=37.9
Q ss_pred CeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCC
Q 036621 265 QSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~ 331 (376)
|.+.+.... +..+.||-+.... .+..+........-+.+..++..++. ..++.+.+||.++++
T Consensus 308 g~~l~sgs~--D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 308 GPFLLSGSR--DKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp CCEEEEEET--TSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CCEEEEEeC--CCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 555555555 7889999887621 23333112222334555666765544 457889999998765
No 186
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.36 E-value=2.7e+02 Score=27.48 Aligned_cols=198 Identities=12% Similarity=0.083 Sum_probs=96.4
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccC---CCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAI---IPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLV 185 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~---~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (376)
+|.|-+.... .++++||.++++..+...+.. ..... ...+..|.... +.++. .. ..+
T Consensus 273 ~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~-----i~~i~~D~~g~----lWigt---~~-------~Gl 332 (795)
T 4a2l_A 273 QNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRS-----VRSIFMDSQGG----MWLGT---YF-------GGL 332 (795)
T ss_dssp TSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSC-----EEEEEECTTSC----EEEEE---SS-------SCE
T ss_pred CCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCc-----EEEEEEeCCcC----EEEEE---CC-------CCe
Confidence 4444443332 577788888777665433211 11111 33455554321 33332 11 245
Q ss_pred EEEEcCCCceEeccCCC--ccc-cCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCC-----CCCCC
Q 036621 186 AVYTLRTNSWKNLKPID--YTM-RLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPC-----ILESS 255 (376)
Q Consensus 186 ~vyss~t~~W~~~~~~p--~~~-~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~-----~~~~~ 255 (376)
..|+..++.++.....+ ... ...-.+++. +|. .|++.. ...|..||..+++|..+..+. .....
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 333 NYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTN-----DGGLNLYNPITQRFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp EEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEES-----SSCEEEECTTTCCEEEECCC------CCSCS
T ss_pred EEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEEC-----CCCeEEEcCCCCcEEEEecCCCCcccCCCCc
Confidence 66666666555443211 111 110113333 344 466654 347899999999998875432 11111
Q ss_pred CceEEEEE-CCe-EEEEEEecCCCEEEEEEecCCceeeEEEEcc-CCc-eeEeEEEeeCCcEEEEecCCEEEEEECCCCC
Q 036621 256 LDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRKKNWIKQLTVGP-FIG-IFQPLLFWKKGAFFVESNSSQLLLYEPGTGE 331 (376)
Q Consensus 256 ~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~-~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~ 331 (376)
.-..+.+. +|. |.+... ...+.++..+...+.......+ +.. ...-+....+|.+.+... ..++.||+++++
T Consensus 407 ~v~~i~~d~~g~~lWigt~---~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTH---AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS 482 (795)
T ss_dssp CEEEEEEETTTTEEEEEET---TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE
T ss_pred cEEEEEEcCCCCEEEEEeC---cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe
Confidence 23344443 677 665443 2345554444333332211000 111 122233344567777665 679999999988
Q ss_pred EEEEE
Q 036621 332 LRDFE 336 (376)
Q Consensus 332 ~~~v~ 336 (376)
++.+.
T Consensus 483 ~~~~~ 487 (795)
T 4a2l_A 483 FTTIE 487 (795)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 87653
No 187
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=41.19 E-value=1.9e+02 Score=25.69 Aligned_cols=191 Identities=12% Similarity=0.075 Sum_probs=95.6
Q ss_pred CCCeEEEEecCc--ccceecCCCcc-CCCCccccccceEEEeeeCC-CCCeEEEEEEEEecCCCCCCcccceEEEEEcCC
Q 036621 117 LNNRITLWNIAT--RESITLPKYRA-IIPQYTRVFGTKIGFGLDPK-TKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRT 192 (376)
Q Consensus 117 ~~~~~~v~NP~T--~~~~~LP~~~~-~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t 192 (376)
...+++++||.+ .+...|..... ....... ..|+.+... ++..+++.+.. .. .. .++++|....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~----PhGi~~~~d~dg~~~L~Vvnh--~~----~~--s~ielf~~d~ 148 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFN----PHGISTFIDDDNTVYLLVVNH--PG----SS--STVEVFKFQE 148 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCC----EEEEEEEECTTCCEEEEEEEC--ST----TC--CEEEEEEEET
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCcee----eeeeEEEECCCCcEEEEEEEC--CC----CC--CeEEEEEEEC
Confidence 356799999974 34444443221 1111111 467776553 45556666632 11 12 5777776654
Q ss_pred --CceEeccCCCc---cccCCcceeEeCceEEEEeccc-C-----------CCCceEEEEEEcCccceeeecCCCCCCCC
Q 036621 193 --NSWKNLKPIDY---TMRLSSERTYFDGAFYWLLKLE-N-----------DNDSYVILSFNMADEKFQEIQGPCILESS 255 (376)
Q Consensus 193 --~~W~~~~~~p~---~~~~~~~~v~~~G~lYwl~~~~-~-----------~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 255 (376)
+....+..... ...+ .-.+.-+|.+|.-.... . ......+..+|.. +.+.+. ....
T Consensus 149 ~~~~~~~~~~~~g~~~~~pN-D~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~--~~l~-- 221 (355)
T 3sre_A 149 EEKSLLHLKTIRHKLLPSVN-DIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA--EGFD-- 221 (355)
T ss_dssp TTTEEEEEEEECCTTCSSEE-EEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE--EEES--
T ss_pred CCCEEEEEeccccCCCCCCc-eEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEee--cCCc--
Confidence 44444432221 2222 33445567766543210 0 1134688899884 333321 0111
Q ss_pred CceEEEEE-CCe-EEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEee-CCcEEEEe--cCCEEEEEECCC
Q 036621 256 LDVTLGIY-YQS-LSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWK-KGAFFVES--NSSQLLLYEPGT 329 (376)
Q Consensus 256 ~~~~l~~~-~G~-L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~--~~~~~~~yd~~~ 329 (376)
....++.. +|+ |+++... ...+..+.++. .+......+ .......-+++.. +|.+++.. +..+++.||++.
T Consensus 222 ~pNGia~spDg~~lYvadt~--~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~ 298 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELL--AHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAEN 298 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTS
T ss_pred ccCcceECCCCCEEEEEeCC--CCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCC
Confidence 12344554 564 5655554 45666666654 444444455 4443344566666 48887743 234677888873
No 188
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=41.13 E-value=13 Score=22.12 Aligned_cols=17 Identities=41% Similarity=0.433 Sum_probs=12.6
Q ss_pred CCCcHHHHHHHHccCCc
Q 036621 7 DDSPEDITIEILSRLPV 23 (376)
Q Consensus 7 ~~LP~Dll~~IL~rLp~ 23 (376)
..||.|+.+|||+--..
T Consensus 22 ~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 22 KQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTSCHHHHHHHTTCCCS
T ss_pred HHCcHHHHHHHHhcchH
Confidence 47888888888875443
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=40.67 E-value=1.7e+02 Score=24.84 Aligned_cols=204 Identities=9% Similarity=0.024 Sum_probs=102.9
Q ss_pred eeceEEEe-cCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 108 YCGIVFIE-GLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 108 ~~Gll~~~-~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
.+|-|.+. .....++++|+.+++...+..... .. ..++.+++.. . ++... . .. .... ..+.
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~------~~~i~~~~dg-~--l~v~~--~-~~-~~~~--~~i~ 115 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---AN------PAAIKIHKDG-R--LFVCY--L-GD-FKST--GGIF 115 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---SS------EEEEEECTTS-C--EEEEE--C-TT-SSSC--CEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---CC------cceEEECCCC-c--EEEEe--C-CC-CCCC--ceEE
Confidence 35666544 355789999999988776532111 11 3567777553 2 22221 1 11 0011 3677
Q ss_pred EEEcCCCceEec-cCCCccccCCcceeEe--CceEEEEecccC-CCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE
Q 036621 187 VYTLRTNSWKNL-KPIDYTMRLSSERTYF--DGAFYWLLKLEN-DNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI 262 (376)
Q Consensus 187 vyss~t~~W~~~-~~~p~~~~~~~~~v~~--~G~lYwl~~~~~-~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~ 262 (376)
+|+..++.-+.. ...... .. ...+.+ +|.+|+...... ......|..+|..+++...+.- ... ....++.
T Consensus 116 ~~d~~~~~~~~~~~~~~~~-~~-~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~--~~~~i~~ 189 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTA-YC-IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS--VANGIAL 189 (333)
T ss_dssp EECTTSCSCEEEECSSSSC-CC-EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES--SEEEEEE
T ss_pred EEeCCCCEEEEEEccCccC-Cc-ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC--cccceEE
Confidence 777776654422 211110 00 112222 677766543210 0024579999988776655421 111 1123333
Q ss_pred E-CCe-EEEEEEecCCCEEEEEEecC--CceeeE-EEE-ccCC--ceeEeEEEeeCCcEEEEec-CCEEEEEECCCCCEE
Q 036621 263 Y-YQS-LSLLILDNVDHCFKIWVMRK--KNWIKQ-LTV-GPFI--GIFQPLLFWKKGAFFVESN-SSQLLLYEPGTGELR 333 (376)
Q Consensus 263 ~-~G~-L~~~~~~~~~~~l~iW~l~~--~~W~~~-~~i-~~~~--~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~ 333 (376)
. +|+ |++.... ...+.+|.++. ...... ..+ .... ....-+++..+|.+++... +..+..||++++..+
T Consensus 190 ~~dg~~l~v~~~~--~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~ 267 (333)
T 2dg1_A 190 STDEKVLWVTETT--ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIG 267 (333)
T ss_dssp CTTSSEEEEEEGG--GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEE
T ss_pred CCCCCEEEEEeCC--CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEE
Confidence 3 565 6665443 56788888753 222211 111 0111 1233355566788877654 578999999876666
Q ss_pred EEEE
Q 036621 334 DFEL 337 (376)
Q Consensus 334 ~v~~ 337 (376)
.+..
T Consensus 268 ~~~~ 271 (333)
T 2dg1_A 268 QILI 271 (333)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6653
No 190
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=40.43 E-value=1.6e+02 Score=24.49 Aligned_cols=197 Identities=9% Similarity=0.070 Sum_probs=90.7
Q ss_pred ceeceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 107 LYCGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 107 s~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
|.+|+|.... .+.+.|||..|++...+-.... +... ...+.+.+.. ++-+.. . .+ ..+.
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~--~~~~-----V~~v~~~~~~-~~l~sg--s---~D-------g~v~ 92 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQ--PGEY-----ISSVAWIKEG-NYLAVG--T---SS-------AEVQ 92 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCS--TTCC-----EEEEEECTTS-SEEEEE--E---TT-------SEEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecC--CCCe-----EEEEEECCCC-CEEEEE--E---CC-------CcEE
Confidence 4567665443 4789999999998775432221 1111 3456665543 333222 1 22 4778
Q ss_pred EEEcCCCceEe-ccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE-EC
Q 036621 187 VYTLRTNSWKN-LKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI-YY 264 (376)
Q Consensus 187 vyss~t~~W~~-~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~-~~ 264 (376)
+++.+++.-.. ...... . ......+|.+-..+.. ...+..++..+.......+..+... ...+.. .+
T Consensus 93 iw~~~~~~~~~~~~~h~~---~-~~~~~~~~~~l~s~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 161 (318)
T 4ggc_A 93 LWDVQQQKRLRNMTSHSA---R-VGSLSWNSYILSSGSR-----SGHIHHHDVRVAEHHVATLSGHSQE--VCGLRWAPD 161 (318)
T ss_dssp EEETTTTEEEEEEECCSS---C-EEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTT
T ss_pred EeecCCceeEEEecCccc---e-EEEeecCCCEEEEEec-----CCceEeeecCCCceeEEEEcCccCc--eEEEEEcCC
Confidence 88887754211 111100 0 1122223333222222 3345555555443332222222111 122222 25
Q ss_pred CeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEee-CCcEEEEe-c--CCEEEEEECCCCCEEEEEE
Q 036621 265 QSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWK-KGAFFVES-N--SSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 265 G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~-~--~~~~~~yd~~~~~~~~v~~ 337 (376)
|++.+.... +..+.||-+.. ....................... ++.++... . ++.+..+|.++........
T Consensus 162 ~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~ 238 (318)
T 4ggc_A 162 GRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD 238 (318)
T ss_dssp SSEEEEEET--TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEec--CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc
Confidence 665555555 67899998876 22222222211111112222222 33444332 2 4568888888877655443
No 191
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=40.20 E-value=1.6e+02 Score=24.98 Aligned_cols=65 Identities=22% Similarity=0.290 Sum_probs=39.5
Q ss_pred eEEEEEEecCCCEEEEEEecC--Cce-eeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCE
Q 036621 266 SLSLLILDNVDHCFKIWVMRK--KNW-IKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 266 ~L~~~~~~~~~~~l~iW~l~~--~~W-~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~ 332 (376)
.+.+.... +..+.+|.+.. ... ..+..+........-+.+..++..++. ..++.+.+||+++++.
T Consensus 31 ~~l~s~s~--D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 31 NLLLSASR--DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp TEEEEEET--TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEEEEecC--CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 55555555 78999999875 222 223333112222344556667776554 4478899999998764
No 192
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=39.92 E-value=2.1e+02 Score=25.70 Aligned_cols=159 Identities=10% Similarity=-0.021 Sum_probs=81.7
Q ss_pred eEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCC
Q 036621 151 KIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLEND 227 (376)
Q Consensus 151 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~ 227 (376)
..|+.+|...+. +.... . .. ..+++++..+..-+.+.. ..... ..++.+ +|.|||....
T Consensus 161 p~glavD~~~~~--lY~~d----~----~~--~~I~~~~~~g~~~~~l~~--~~~~~-P~~iavdp~~g~ly~td~~--- 222 (400)
T 3p5b_L 161 PDGLAVDWIHSN--IYWTD----S----VL--GTVSVADTKGVKRKTLFR--ENGSK-PRAIVVDPVHGFMYWTDWG--- 222 (400)
T ss_dssp EEEEEEETTTTE--EEEEE----T----TT--TEEEEECTTTCSEEEEEE--CSSCC-EEEEEEETTTTEEEEEECS---
T ss_pred cccEEEEecCCc--eEEEE----C----CC--CeEEEEeCCCCceEEEEe--CCCCC-cceEEEecccCeEEEEeCC---
Confidence 357888865543 22221 1 11 366777776554443321 01111 224444 6899998743
Q ss_pred CCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE--CCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEe
Q 036621 228 NDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY--YQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQP 304 (376)
Q Consensus 228 ~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~ 304 (376)
....|..+|++...-..+-. .... ....|+.. +|+|+++... ...|...-++. ...+... ....+..|
T Consensus 223 -~~~~I~~~~~dG~~~~~~~~-~~l~--~P~glavd~~~~~lY~aD~~--~~~I~~~d~dG~~~~~~~~---~~~~l~~P 293 (400)
T 3p5b_L 223 -TPAKIKKGGLNGVDIYSLVT-ENIQ--WPNGITLDLLSGRLYWVDSK--LHSISSIDVNGGNRKTILE---DEKRLAHP 293 (400)
T ss_dssp -SSCCEEEEETTSCSCEEEEC-SSCS--CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCCCEEEEE---CSSTTSSE
T ss_pred -CCCEEEEEeCCCCccEEEEE-CCCC--ceEEEEEEeCCCEEEEEECC--CCEEEEEeCCCCccEEEEe---CCCCCCCC
Confidence 23579999988755444311 1111 13445555 6789888764 45554444444 2222221 11223455
Q ss_pred EEEeeCC-cEEEEec-CCEEEEEECCCC-CEEEEE
Q 036621 305 LLFWKKG-AFFVESN-SSQLLLYEPGTG-ELRDFE 336 (376)
Q Consensus 305 ~~~~~~~-~l~~~~~-~~~~~~yd~~~~-~~~~v~ 336 (376)
.++.-.+ .+|+... ...+..+|..++ ..+.+.
T Consensus 294 ~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 294 FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 5655444 4665544 456999996655 444444
No 193
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=39.87 E-value=2.6e+02 Score=26.86 Aligned_cols=187 Identities=10% Similarity=0.060 Sum_probs=91.2
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCC-ceEe
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTN-SWKN 197 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~-~W~~ 197 (376)
..+++||..+++...+..... .... ...+.+.|.. ++-++.. .+..... ..+.+++..++ ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~--~~~~-----~~~~~~spdg-~~l~~~~-----~~~~~~~--~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEP--KEKF-----LTNLSWSPDE-NILYVAE-----VNRAQNE--CKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSC--TTCE-----EEEEEECTTS-SEEEEEE-----ECTTSCE--EEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceEeeccCCC--Ccee-----EeeEEEECCC-CEEEEEE-----eCCCCCe--eEEEEEECCCCceeeE
Confidence 579999999988766543211 1111 2345554432 3222221 1111122 57788888777 6655
Q ss_pred ccCCC-cccc--CCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE-EEEE-CCe-EEE
Q 036621 198 LKPID-YTMR--LSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT-LGIY-YQS-LSL 269 (376)
Q Consensus 198 ~~~~p-~~~~--~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~-l~~~-~G~-L~~ 269 (376)
+.... ..+. .......- +|.+.+....+ ....|..+|...+....+.. +... ... +... +|+ |++
T Consensus 300 ~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~---g~~~l~~~~~~~~~~~~l~~--~~~~--v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 300 LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD---GWNHLYLYDTTGRLIRQVTK--GEWE--VTNFAGFDPKGTRLYF 372 (706)
T ss_dssp EEEEECSSCCCCCSCCEECTTCSSEEEEEECTT---SSCEEEEEETTSCEEEECCC--SSSC--EEEEEEECTTSSEEEE
T ss_pred EEEccCCCeECccCCceeecCCCCEEEEEEccC---CccEEEEEECCCCEEEecCC--CCeE--EEeeeEEcCCCCEEEE
Confidence 43110 0110 00112222 78877766543 34578888877666555532 1111 122 2333 565 444
Q ss_pred EEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEE-EEecC----CEEEEEECCCCC
Q 036621 270 LILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFF-VESNS----SQLLLYEPGTGE 331 (376)
Q Consensus 270 ~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~-~~~~~----~~~~~yd~~~~~ 331 (376)
...........||..+- .. ...+ ....-...+.+..+++.+ +...+ ..++.+|.++++
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~---~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK---TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC---CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EecCCCCceEEEEEEEcCCCC---ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 44432222466776654 32 2233 222213345666677643 33222 459999999887
No 194
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=39.81 E-value=2.7e+02 Score=26.94 Aligned_cols=186 Identities=11% Similarity=0.020 Sum_probs=97.7
Q ss_pred cceeceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 106 GLYCGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 106 ~s~~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
+..+|.|...+ ...++..+++-.+....+-.... .. ..|+++|...+. +.... . .. ..
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~---~~------P~GlAvD~~~~~--LY~tD----~----~~--~~ 103 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL---DY------PEGMAVDWLGKN--LYWAD----T----GT--NR 103 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---SC------CCEEEEETTTTE--EEEEE----T----TT--TE
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC---CC------cceEEEEeCCCE--EEEEE----C----CC--CE
Confidence 34467777665 45677777776544333322111 11 247888866553 22221 1 11 47
Q ss_pred EEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 185 VAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 185 ~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
++++++.+..=+.+.. ..... ..++.+ +|.|||.... ....|..+|++...-..+-- ... ....|+
T Consensus 104 I~v~~~dG~~~~~l~~--~~l~~-P~~iavdp~~G~lY~tD~g----~~~~I~r~~~dG~~~~~l~~--~~~--~P~Gla 172 (628)
T 4a0p_A 104 IEVSKLDGQHRQVLVW--KDLDS-PRALALDPAEGFMYWTEWG----GKPKIDRAAMDGSERTTLVP--NVG--RANGLT 172 (628)
T ss_dssp EEEEETTSTTCEEEEC--SSCCC-EEEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEEC--SCS--SEEEEE
T ss_pred EEEEecCCCcEEEEEe--CCCCC-cccEEEccCCCeEEEeCCC----CCCEEEEEeCCCCceEEEEC--CCC--CcceEE
Confidence 7888876543222210 11111 224444 5999998643 24689999998766555421 111 133454
Q ss_pred EE--CCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEeeC-CcEEEEec-CCEEEEEECCCCC
Q 036621 262 IY--YQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWKK-GAFFVESN-SSQLLLYEPGTGE 331 (376)
Q Consensus 262 ~~--~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~-~~l~~~~~-~~~~~~yd~~~~~ 331 (376)
.. +++|+++... ...+....++. .. +.+. ..+..|.++.-. +.+|+... ...+..+|..+++
T Consensus 173 lD~~~~~LY~aD~~--~~~I~~~d~dG~~~-~v~~-----~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 173 IDYAKRRLYWTDLD--TNLIESSNMLGLNR-EVIA-----DDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTSCSC-EEEE-----ECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EccccCEEEEEECC--CCEEEEEcCCCCce-EEee-----ccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 44 5889988875 45555444444 22 2111 112345555433 45665554 5678999976654
No 195
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=39.26 E-value=1.8e+02 Score=24.81 Aligned_cols=96 Identities=20% Similarity=0.254 Sum_probs=54.2
Q ss_pred ceEEEEEEcCccceee-ecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEE
Q 036621 230 SYVILSFNMADEKFQE-IQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLF 307 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (376)
...|..+|+.+.+... +..... . -..+.-. +|++.+.... +..+.||.+.... ....+........-+++
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~--~--v~~l~~spd~~~l~s~s~--dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~ 256 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAM--P--IRSLTFSPDSQLLVTASD--DGYIKIYDVQHAN--LAGTLSGHASWVLNVAF 256 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS--C--CCEEEECTTSCEEEEECT--TSCEEEEETTTCC--EEEEECCCSSCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEcccCC--c--eeEEEEcCCCCEEEEEcC--CCeEEEEECCCcc--eeEEEcCCCCceEEEEE
Confidence 4478889988765422 222111 1 1223333 5666555555 7789999887632 23344112222334555
Q ss_pred eeCCcEEEE-ecCCEEEEEECCCCCEE
Q 036621 308 WKKGAFFVE-SNSSQLLLYEPGTGELR 333 (376)
Q Consensus 308 ~~~~~l~~~-~~~~~~~~yd~~~~~~~ 333 (376)
..++..++. ..++.+.+||+++++..
T Consensus 257 sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 257 CPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 666765554 45778999999987643
No 196
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=38.69 E-value=54 Score=25.84 Aligned_cols=39 Identities=10% Similarity=0.218 Sum_probs=28.6
Q ss_pred CeEEEEecCcc-cceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEE
Q 036621 119 NRITLWNIATR-ESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLI 168 (376)
Q Consensus 119 ~~~~v~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~ 168 (376)
-.++++||.|+ .|+..-... . .+.+.+|+..+.|+|+.+
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~-----~------~V~i~~d~~rnsyRIvg~ 55 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA-----V------TVSYFYDSTRNVYRIISL 55 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC-----E------EEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC-----e------EEEEEEcCCCCEEEEEEc
Confidence 36789999997 897543221 1 467778998889999987
No 197
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=38.08 E-value=2.4e+02 Score=25.82 Aligned_cols=69 Identities=12% Similarity=0.107 Sum_probs=47.6
Q ss_pred CCeEEEEEEecC-----CCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCc-EEEEec--CCEEEEEECCCCCEE
Q 036621 264 YQSLSLLILDNV-----DHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGA-FFVESN--SSQLLLYEPGTGELR 333 (376)
Q Consensus 264 ~G~L~~~~~~~~-----~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~~~--~~~~~~yd~~~~~~~ 333 (376)
+++|++...... ...=.||+.+-..+..+.+| +......-+.+..+++ .++..+ ++.+.++|.++.+..
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I-~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKI-ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE-EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEE-ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 356777765321 12447899988899999999 6655344456677777 655444 688999999998754
No 198
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=37.73 E-value=2e+02 Score=24.90 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=52.8
Q ss_pred eEEEEEEcCccce-eeecCCCCC---------CCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEc---
Q 036621 231 YVILSFNMADEKF-QEIQGPCIL---------ESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVG--- 296 (376)
Q Consensus 231 ~~il~fD~~~~~~-~~i~~P~~~---------~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~--- 296 (376)
..|..||+.+.+. ..+..|... .......+.-. +|++.+.... +..+.||.+... ..+..+.
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~--~~~~~~~~~~ 333 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW--DGKLRFWDVKTK--ERITTLNMHC 333 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET--TSEEEEEETTTT--EEEEEEECCG
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC--CCeEEEEEcCCC--ceeEEEeccc
Confidence 6899999877653 333332110 01112233333 5766555555 789999988763 3444441
Q ss_pred ---cC---------------CceeEeEEEeeCC----------cEEEE-ecCCEEEEEECCCCC
Q 036621 297 ---PF---------------IGIFQPLLFWKKG----------AFFVE-SNSSQLLLYEPGTGE 331 (376)
Q Consensus 297 ---~~---------------~~~~~~~~~~~~~----------~l~~~-~~~~~~~~yd~~~~~ 331 (376)
.. .....-+.+..++ .+++. ..++.+.+||+++++
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 334 DDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp GGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 11 2223445556665 45544 457889999988763
No 199
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=37.21 E-value=2e+02 Score=24.68 Aligned_cols=195 Identities=10% Similarity=-0.002 Sum_probs=96.1
Q ss_pred cceeceEEEec-CCCeEEEEecCc----ccce-ecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCC
Q 036621 106 GLYCGIVFIEG-LNNRITLWNIAT----RESI-TLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSS 179 (376)
Q Consensus 106 ~s~~Gll~~~~-~~~~~~v~NP~T----~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 179 (376)
+..+|.|...+ ...++..+++.+ +... .++.. ... ..++.+|...+. +..... .
T Consensus 38 d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~----~~~------p~glavd~~~~~--ly~~d~---~----- 97 (316)
T 1ijq_A 38 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----IQA------PDGLAVDWIHSN--IYWTDS---V----- 97 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--------CEEEECSS----CSC------CCEEEEETTTTE--EEEEET---T-----
T ss_pred EeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC----CCC------cCEEEEeecCCe--EEEEEC---C-----
Confidence 33466776665 457888888876 2222 22211 011 246777765443 222210 1
Q ss_pred cccceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCC
Q 036621 180 CAFSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSL 256 (376)
Q Consensus 180 ~~~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 256 (376)
. ..+++++.....=+.+.. ..... ..++.+ +|.+||.... ....|..+|++...-..+-. .... .
T Consensus 98 ~--~~I~~~~~~g~~~~~~~~--~~~~~-P~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~~~~-~~~~--~ 165 (316)
T 1ijq_A 98 L--GTVSVADTKGVKRKTLFR--ENGSK-PRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVT-ENIQ--W 165 (316)
T ss_dssp T--TEEEEEETTSSSEEEEEE--CTTCC-EEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEEC-SSCS--C
T ss_pred C--CEEEEEeCCCCceEEEEE--CCCCC-cceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEEEEE-CCCC--C
Confidence 1 467777776543222211 00111 223443 6899998643 23689999997665444411 1111 1
Q ss_pred ceEEEEE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEee-CCcEEEEec-CCEEEEEECCCCC-
Q 036621 257 DVTLGIY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWK-KGAFFVESN-SSQLLLYEPGTGE- 331 (376)
Q Consensus 257 ~~~l~~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~yd~~~~~- 331 (376)
...|+.. +|+|+++... ...|...-++...=..+... ...+..|.++.- ++.+|+... ..++..+|+.+++
T Consensus 166 P~gla~d~~~~~lY~~D~~--~~~I~~~d~dg~~~~~~~~~--~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSK--LHSISSIDVNGGNRKTILED--EKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEEEC--TTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred ceEEEEeccCCEEEEEECC--CCeEEEEecCCCceEEEeec--CCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcc
Confidence 3455555 6788888764 45565555544211111111 112234444433 355666554 5689999987654
Q ss_pred EEEEE
Q 036621 332 LRDFE 336 (376)
Q Consensus 332 ~~~v~ 336 (376)
.+.+.
T Consensus 242 ~~~i~ 246 (316)
T 1ijq_A 242 VNLLA 246 (316)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 44443
No 200
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=35.90 E-value=2.2e+02 Score=24.74 Aligned_cols=188 Identities=7% Similarity=0.021 Sum_probs=86.9
Q ss_pred eceEEEec-CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIEG-LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~~-~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|-.++.. ....+.+||..+++...--.. .... ...+.+.+....+ ++.. . .+ ..+.+
T Consensus 138 dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~---h~~~------V~~~~~~~~~~~~-l~s~-s---~D-------~~v~i 196 (344)
T 4gqb_B 138 SGTQAVSGSKDICIKVWDLAQQVVLSSYRA---HAAQ------VTCVAASPHKDSV-FLSC-S---ED-------NRILL 196 (344)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC---CSSC------EEEEEECSSCTTE-EEEE-E---TT-------SCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcC---cCCc------eEEEEecCCCCCc-eeee-c---cc-------ccccc
Confidence 45444443 567899999998876542211 1111 3455555443332 2222 1 22 46788
Q ss_pred EEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE
Q 036621 188 YTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY 263 (376)
Q Consensus 188 yss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~ 263 (376)
++.+++.-...-.....-.. ..++.+ ++.+...+.. ...|..+|+.+.+.. .+.. +... -..+.-.
T Consensus 197 wd~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~l~sg~~-----dg~v~~wd~~~~~~~~~~~~--h~~~--v~~v~fs 266 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYL-PTSLAWHPQQSEVFVFGDE-----NGTVSLVDTKSTSCVLSSAV--HSQC--VTGLVFS 266 (344)
T ss_dssp EETTSSSCEEECC----CCC-EEEEEECSSCTTEEEEEET-----TSEEEEEESCC--CCEEEEC--CSSC--EEEEEEC
T ss_pred ccccccceeeeeecceeecc-ceeeeecCCCCcceEEecc-----CCcEEEEECCCCcEEEEEcC--CCCC--EEEEEEc
Confidence 88876543221100000000 012221 2333333322 457888998775432 2221 1111 1233333
Q ss_pred -CC-eEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCc-EEEE-ecCCEEEEEECCCCCE
Q 036621 264 -YQ-SLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGA-FFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 264 -~G-~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~-~~~~~~~~yd~~~~~~ 332 (376)
+| ++.+.... +..+.||-+...+ . ...........-+++..++. ++.. ..|+.+.++++.++..
T Consensus 267 p~g~~~lasgs~--D~~i~vwd~~~~~--~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 267 PHSVPFLASLSE--DCSLAVLDSSLSE--L-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSSSCCEEEEET--TSCEEEECTTCCE--E-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred cCCCeEEEEEeC--CCeEEEEECCCCc--E-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 45 34444444 6889999765532 2 22212222234455555554 5544 4578899999987654
No 201
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=35.80 E-value=2.1e+02 Score=24.53 Aligned_cols=179 Identities=7% Similarity=0.009 Sum_probs=87.3
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCC----Cc
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRT----NS 194 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t----~~ 194 (376)
..+...++.+++...+-+. ... ..++.+|+..+. +..... .. ..+..++..+ ..
T Consensus 10 ~~I~~i~~~~~~~~~~~~~----~~~------p~g~~~d~~~~~--ly~~D~---~~-------~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN----LRN------VVALDTEVASNR--IYWSDL---SQ-------RMICSTQLDRAHGVSS 67 (316)
T ss_dssp SSEEEEETTSCCCEEEECS----CSS------EEEEEEETTTTE--EEEEET---TT-------TEEEEEEC--------
T ss_pred CeEEEEECCCcceEehhcC----CCc------eEEEEEEeCCCE--EEEEEC---CC-------CcEEEEECCCCCCCcc
Confidence 4566777777665443211 111 468888876553 222211 11 3666666654 11
Q ss_pred eEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE--CCeEEE
Q 036621 195 WKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY--YQSLSL 269 (376)
Q Consensus 195 W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~--~G~L~~ 269 (376)
-+.+. +..... ..++.+ +|.+||.... ...|..+|+....-..+-- .... ....+++. +|.|++
T Consensus 68 ~~~~~--~~~~~~-p~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~-~~~~--~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 68 YDTVI--SRDIQA-PDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFR-ENGS--KPRAIVVDPVHGFMYW 136 (316)
T ss_dssp CEEEE--CSSCSC-CCEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEE-CTTC--CEEEEEEETTTTEEEE
T ss_pred cEEEE--eCCCCC-cCEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEE-CCCC--CcceEEeCCCCCEEEE
Confidence 12111 111111 224443 6899998754 4589999998765444311 1111 13445554 677887
Q ss_pred EEEecCCCEEEEEEecCCceeeEEEEccCCceeEeE--EEee-CCcEEEEec-CCEEEEEECCCCCEEEE
Q 036621 270 LILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPL--LFWK-KGAFFVESN-SSQLLLYEPGTGELRDF 335 (376)
Q Consensus 270 ~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~--~~~~-~~~l~~~~~-~~~~~~yd~~~~~~~~v 335 (376)
..... ...|....++.. -.+ .+.. ..+..|. ++.. ++.||+... ...+..+|+++...+.+
T Consensus 137 ~d~~~-~~~I~~~~~dG~-~~~--~~~~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 137 TDWGT-PAKIKKGGLNGV-DIY--SLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp EECSS-SCEEEEEETTSC-CEE--EEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EccCC-CCeEEEEcCCCC-CeE--EEEE-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 76431 234433334332 111 1201 1223444 4443 345666654 45799999987665555
No 202
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=35.72 E-value=60 Score=23.59 Aligned_cols=41 Identities=7% Similarity=0.109 Sum_probs=29.1
Q ss_pred CeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEE
Q 036621 119 NRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLI 168 (376)
Q Consensus 119 ~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~ 168 (376)
..++.+||.|++|...- .. ... ..+.+..|...+.|+|+..
T Consensus 11 A~V~~~d~~~~~W~p~~--~~---~g~----s~V~~~~d~~~~~yrIv~~ 51 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAG--GS---TGF----SRVHIYHHTGNNTFRVVGR 51 (112)
T ss_dssp EEEEEEETTTTEEEEGG--GC---CSC----EEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCCCceEECC--CC---CCc----eEEEEEEECCCCEEEEEEE
Confidence 36788999999775433 11 111 1478899988899999987
No 203
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=35.70 E-value=2.7e+02 Score=25.75 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=54.3
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (376)
...|..||...+....+..+... -..+... +|++.+.... +..+.+|.++.. .+..+........-+++.
T Consensus 406 d~~v~~~~~~~~~~~~~~~~~~~----v~~~~~s~d~~~l~~~~~--d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~s 476 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLTGHSSS----VWGVAFSPDDQTIASASD--DKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFS 476 (577)
T ss_dssp TSEEEEECTTCCEEEEEECCSSC----EEEEEECTTSSEEEEEET--TSEEEEEETTSC---EEEEEECCSSCEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEecCCCCC----eEEEEECCCCCEEEEEcC--CCEEEEEECCCC---EEEEEcCCCCCEEEEEEc
Confidence 34677788665544444322111 1233333 5665555555 678999986542 223331222223445666
Q ss_pred eCCcEEEE-ecCCEEEEEECCCCCEEEEE
Q 036621 309 KKGAFFVE-SNSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 309 ~~~~l~~~-~~~~~~~~yd~~~~~~~~v~ 336 (376)
.+++++.. ..++.+.+||..++..+.+.
T Consensus 477 pd~~~las~~~d~~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 477 PDGQTIASASDDKTVKLWNRNGQLLQTLT 505 (577)
T ss_dssp TTSCEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Confidence 77776554 45678999997766555554
No 204
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=35.57 E-value=2.2e+02 Score=24.79 Aligned_cols=195 Identities=10% Similarity=-0.004 Sum_probs=0.0
Q ss_pred ceeceEEEec---CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccc
Q 036621 107 LYCGIVFIEG---LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFS 183 (376)
Q Consensus 107 s~~Gll~~~~---~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 183 (376)
|-+|-++... ....+.|||+.+++.+........ ...+.+.|... .++.... .
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~----------V~~v~fspdg~--~l~s~s~------------~ 197 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGE----------VKDLHFSTDGK--VVAYITG------------S 197 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSC----------CCEEEECTTSS--EEEEECS------------S
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCc----------eEEEEEccCCc--eEEeccc------------e
Q ss_pred eEEEEEcCCCceEeccCCCc--cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEE
Q 036621 184 LVAVYTLRTNSWKNLKPIDY--TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLG 261 (376)
Q Consensus 184 ~~~vyss~t~~W~~~~~~p~--~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~ 261 (376)
.+.++...++.-........ ..-. .-...-+|.....+...... ...+..+|...........-..........-+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 275 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDKNWSLS-KINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSM 275 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCTTEEEE-EEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEE
T ss_pred eEEEEEeccCcceeeeecCCCCCCEE-EEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeE
Q ss_pred EE--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEec-CCEEEEEECCCC
Q 036621 262 IY--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN-SSQLLLYEPGTG 330 (376)
Q Consensus 262 ~~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~ 330 (376)
.. +|++.+.... +..+.||-++..+=.....- -......-+++..++..++... |+.+-++|+.++
T Consensus 276 ~~Spdg~~lasgs~--D~~V~iwd~~~~~~~~~~~~-gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 276 DVDMKGELAVLASN--DNSIALVKLKDLSMSKIFKQ-AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EECTTSCEEEEEET--TSCEEEEETTTTEEEEEETT-SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EECCCCCceEEEcC--CCEEEEEECCCCcEEEEecC-cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
No 205
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=34.84 E-value=2.2e+02 Score=24.59 Aligned_cols=135 Identities=4% Similarity=-0.069 Sum_probs=72.7
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~ 259 (376)
..+.+|+..++.....-.....-.. -.++.+ +|.....+.. ...|..+|+.++....+........ ....
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~ 168 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDA-ITGMKFNQFNTNQLFVSSI-----RGATTLRDFSGSVIQVFAKTDSWDY-WYCC 168 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCB-EEEEEEETTEEEEEEEEET-----TTEEEEEETTSCEEEEEECCCCSSC-CEEE
T ss_pred CeEEEEeCCCcccceeeecCCcCCc-eeEEEeCCCCCCEEEEEeC-----CCEEEEEECCCCceEEEeccCCCCC-CeEE
Confidence 4788898887765544321110000 112222 3344333332 4589999999877766644332221 1223
Q ss_pred EEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCc-EEEE-ecCCEEEEEECCC
Q 036621 260 LGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGA-FFVE-SNSSQLLLYEPGT 329 (376)
Q Consensus 260 l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~-~~~~~~~~yd~~~ 329 (376)
+... +|+..+.... +..+.+|.+... .+..+........-+.+..++. +++. ..++.+.+||+++
T Consensus 169 ~~~~~~~~~l~~~~~--d~~i~i~d~~~~---~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 169 VDVSVSRQMLATGDS--TGRLLLLGLDGH---EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEETTTTEEEEEET--TSEEEEEETTSC---EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEECCCCCEEEEECC--CCCEEEEECCCC---EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3333 5666655555 789999998542 2233311222234455566666 5544 4477899999987
No 206
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=34.83 E-value=1.8e+02 Score=25.14 Aligned_cols=80 Identities=8% Similarity=-0.046 Sum_probs=45.3
Q ss_pred eeEe--CceEEEEecccCCCCceEEEEEEcCccc-eeeecCCCCCCC--CCceEEEEE--CCeEEEEEEec-CCCEEEEE
Q 036621 211 RTYF--DGAFYWLLKLENDNDSYVILSFNMADEK-FQEIQGPCILES--SLDVTLGIY--YQSLSLLILDN-VDHCFKIW 282 (376)
Q Consensus 211 ~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~~~--~~~~~l~~~--~G~L~~~~~~~-~~~~l~iW 282 (376)
++.+ +|.|||+...........|+.||+.+.+ ...+.+|..... .....++.. +|.+++..... ....+.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 4555 4889887632000013589999998876 456677643221 123455555 46677765510 25677777
Q ss_pred EecC-Ccee
Q 036621 283 VMRK-KNWI 290 (376)
Q Consensus 283 ~l~~-~~W~ 290 (376)
-++. ..|.
T Consensus 151 d~~~g~~~r 159 (343)
T 2qe8_A 151 DLQTGLAAR 159 (343)
T ss_dssp ETTTCCEEE
T ss_pred ECCCCCEEE
Confidence 7665 4444
No 207
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.64 E-value=32 Score=22.87 Aligned_cols=19 Identities=21% Similarity=0.391 Sum_probs=15.5
Q ss_pred EEEEecCCEEEEEECCCCC
Q 036621 313 FFVESNSSQLLLYEPGTGE 331 (376)
Q Consensus 313 l~~~~~~~~~~~yd~~~~~ 331 (376)
......++++|+||..|+.
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp EEEEESSSCEEEEETTTTE
T ss_pred EEEECCCCCEEEecCcccc
Confidence 4556678999999999985
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=33.95 E-value=2.1e+02 Score=24.05 Aligned_cols=197 Identities=11% Similarity=0.077 Sum_probs=96.7
Q ss_pred eEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEc
Q 036621 111 IVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTL 190 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 190 (376)
|+........++.++| +++...+..+.. . ..++.+|+.. . ++.. . + .. ..+..|+.
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~~----~------~~gl~~d~dG-~--l~v~-~-~-~~-------~~v~~~~~ 114 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDATA----F------TNGNAVDAQQ-R--LVHC-E-H-GR-------RAITRSDA 114 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESCS----C------EEEEEECTTS-C--EEEE-E-T-TT-------TEEEEECT
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCCC----c------cceeeECCCC-C--EEEE-E-C-CC-------CEEEEECC
Confidence 4444445678899998 665444332211 1 3577777643 2 2222 1 1 11 35666665
Q ss_pred CCCceEeccCC-Cc-cccCC-cceeEeCceEEEEe----ccc--------CCCCceEEEEEEcCccceeeecCCCCCCCC
Q 036621 191 RTNSWKNLKPI-DY-TMRLS-SERTYFDGAFYWLL----KLE--------NDNDSYVILSFNMADEKFQEIQGPCILESS 255 (376)
Q Consensus 191 ~t~~W~~~~~~-p~-~~~~~-~~~v~~~G~lYwl~----~~~--------~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 255 (376)
. ++.+.+... .. ..... .-.+--+|.+|+.. ... .......|..+|..++++..+. ....
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~- 189 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDH- 189 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESS-
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCC-
Confidence 4 444444311 11 11110 11222378877742 100 0002468999999888777654 1111
Q ss_pred CceEEEEE-CCe-EEEEEEec---CCCEEEEEEecCCceeeEEEEccC-CceeEeEEEeeCCcEEEEecCCEEEEEECCC
Q 036621 256 LDVTLGIY-YQS-LSLLILDN---VDHCFKIWVMRKKNWIKQLTVGPF-IGIFQPLLFWKKGAFFVESNSSQLLLYEPGT 329 (376)
Q Consensus 256 ~~~~l~~~-~G~-L~~~~~~~---~~~~l~iW~l~~~~W~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~ 329 (376)
...++.. +|+ |+++.... ....+.+|.++.........+... .....-+.+..+|.+++.. ...+..||+++
T Consensus 190 -p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g 267 (305)
T 3dr2_A 190 -PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDSDG 267 (305)
T ss_dssp -EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECTTS
T ss_pred -CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECCCC
Confidence 2334444 565 55554421 024566665555332222222011 1112235666778866655 56799999988
Q ss_pred CCEEEEEEe
Q 036621 330 GELRDFELE 338 (376)
Q Consensus 330 ~~~~~v~~~ 338 (376)
+.+..+...
T Consensus 268 ~~~~~~~~~ 276 (305)
T 3dr2_A 268 QLLGHIPTP 276 (305)
T ss_dssp CEEEEEECS
T ss_pred CEEEEEECC
Confidence 877777654
No 209
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=33.50 E-value=3.3e+02 Score=26.19 Aligned_cols=187 Identities=13% Similarity=-0.027 Sum_probs=0.0
Q ss_pred ccceeceEEEec-CCCeEEEEecCcc--cceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcc
Q 036621 105 KGLYCGIVFIEG-LNNRITLWNIATR--ESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCA 181 (376)
Q Consensus 105 ~~s~~Gll~~~~-~~~~~~v~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 181 (376)
++..+|.|+..+ ...++..+++-.. ....+...... ..|+.+|...+...+.-...
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~----------P~GlAvD~~~~~ly~~d~~~----------- 105 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS----------PDGLACDWLGEKLYWTDSET----------- 105 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSC----------EEEEEEETTTTEEEEEETTT-----------
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCC----------cCeEEEEecCCEEEEEeCCC-----------
Q ss_pred cceEEEEEcCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCce
Q 036621 182 FSLVAVYTLRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDV 258 (376)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 258 (376)
..+++++..+..=+.+..-....++ ++.+ +|.|||.... ....|..++++...-..+--..... ..
T Consensus 106 -~~I~v~~~dG~~~~~l~~~~l~~P~---~Iavdp~~g~ly~tD~g----~~~~I~r~~~dG~~~~~l~~~~~~~---P~ 174 (619)
T 3s94_A 106 -NRIEVSNLDGSLRKVLFWQELDQPR---AIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIINSEIYW---PN 174 (619)
T ss_dssp -TEEEEEETTSCSCEEEECSSCSCCC---CEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEECSSCSS---EE
T ss_pred -CEEEEEECCCCCEEEEEeCCCCCCc---eEEEecCCCeEEEeccC----CCCEEEEEECCCCceEEEEeCCCCC---Cc
Q ss_pred EEEEE--CCeEEEEEEecCCCEEEEEEecC-CceeeEE-EEccCCceeEeEEEeeCCcEEEEec--CCEEEEEECCCCC
Q 036621 259 TLGIY--YQSLSLLILDNVDHCFKIWVMRK-KNWIKQL-TVGPFIGIFQPLLFWKKGAFFVESN--SSQLLLYEPGTGE 331 (376)
Q Consensus 259 ~l~~~--~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~-~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~yd~~~~~ 331 (376)
.|+.. +|+|+++... ...+..--++. ....... .+ ..|.++.-.++-+++.+ ...+...|..+++
T Consensus 175 Glald~~~~~LY~aD~~--~~~I~~~~~dG~~~~~~~~~~~------~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 175 GLTLDYEEQKLYWADAK--LNFIHKSNLDGTNRQAVVKGSL------PHPFALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEEEETTTTEEEEEETT--TCCEEEESSSCCEEC---------------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred EEEEEccCCEEEEEeCC--CCeEEEecCCCCccEEEEeCCC------CCceEEEEeCCEEEEecCCCCEEEEEECCCCc
No 210
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=33.34 E-value=2.2e+02 Score=23.93 Aligned_cols=186 Identities=14% Similarity=0.135 Sum_probs=90.8
Q ss_pred eEEEecCCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEE
Q 036621 111 IVFIEGLNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYT 189 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (376)
+|+.......+.+||..+++... +.. +... ...+.+.|.. .+ +..+. .+ ..+.+++
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~-----h~~~-----v~~~~~~~~~-~~--l~sgs---~D-------~~v~lWd 125 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEA-----HPDY-----IRSIAVHPTK-PY--VLSGS---DD-------LTVKLWN 125 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-----CSSC-----EEEEEECSSS-SE--EEEEE---TT-------SCEEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeC-----CCCc-----EEEEEEcCCC-CE--EEEEC---CC-------CeEEEEE
Confidence 34444467889999999887543 211 1111 3456665543 22 22211 22 4678888
Q ss_pred cCCCceEeccCCCccccCCcceeEe---CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEE--
Q 036621 190 LRTNSWKNLKPIDYTMRLSSERTYF---DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIY-- 263 (376)
Q Consensus 190 s~t~~W~~~~~~p~~~~~~~~~v~~---~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~-- 263 (376)
.+++. .....+... ...-.++.+ +|.+...+.. ...|..+|+.+..-... ..... . .......
T Consensus 126 ~~~~~-~~~~~~~~h-~~~v~~v~~~p~~~~~l~sgs~-----D~~v~iwd~~~~~~~~~~~~~~~-~---~v~~~~~~~ 194 (304)
T 2ynn_A 126 WENNW-ALEQTFEGH-EHFVMCVAFNPKDPSTFASGCL-----DRTVKVWSLGQSTPNFTLTTGQE-R---GVNYVDYYP 194 (304)
T ss_dssp GGGTT-EEEEEECCC-CSCEEEEEECTTCTTEEEEEET-----TSEEEEEETTCSSCSEEEECCCT-T---CEEEEEECC
T ss_pred CCCCc-chhhhhccc-CCcEEEEEECCCCCCEEEEEeC-----CCeEEEEECCCCCccceeccCCc-C---cEEEEEEEE
Confidence 76541 111100000 000112222 2333333322 45788889865442211 11110 1 1222222
Q ss_pred --CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEe-cCCEEEEEECCCCCEEE
Q 036621 264 --YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVES-NSSQLLLYEPGTGELRD 334 (376)
Q Consensus 264 --~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~yd~~~~~~~~ 334 (376)
++.+.+.... +..+.||-+... ..+.++........-+.+..++.+++.. .++.+.+||.++.+..+
T Consensus 195 ~~~~~~l~s~s~--D~~i~iWd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 195 LPDKPYMITASD--DLTIKIWDYQTK--SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp STTCCEEEEEET--TSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred cCCCCEEEEEcC--CCeEEEEeCCCC--ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 4455554445 789999988763 2334441122223445556667765554 47789999999987554
No 211
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=31.73 E-value=8.8 Score=34.57 Aligned_cols=27 Identities=4% Similarity=-0.098 Sum_probs=16.8
Q ss_pred ceeEeCceEEEEecccCCCCceEEEEEEcCccc
Q 036621 210 ERTYFDGAFYWLLKLENDNDSYVILSFNMADEK 242 (376)
Q Consensus 210 ~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~ 242 (376)
.++..+|.+|.-.. ...|.++|..+.+
T Consensus 4 sP~v~~~~v~~gs~------dg~v~a~d~~tG~ 30 (369)
T 2hz6_A 4 TVTLPETLLFVSTL------DGSLHAVSKRTGS 30 (369)
T ss_dssp ----CTTEEEEEET------TSEEEEEETTTCC
T ss_pred CCeeeCCEEEEEcC------CCEEEEEECCCCC
Confidence 46667788887663 3489999986643
No 212
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=31.26 E-value=2.3e+02 Score=23.70 Aligned_cols=65 Identities=12% Similarity=0.168 Sum_probs=38.5
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~ 332 (376)
+|.+.+.... +..+.||.++... .+..+.........+.+..++..++. ..++.+.+||.++++.
T Consensus 24 ~~~~l~s~~~--dg~v~lWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 24 TEPWVLTTLY--SGRVELWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp SSSEEEEEET--TSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCEEEEEcC--CCcEEEEECCCCc--eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 5555555555 7899999887633 23333112222334455566665544 4577899999988764
No 213
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=30.97 E-value=3.7e+02 Score=25.88 Aligned_cols=179 Identities=17% Similarity=0.162 Sum_probs=82.2
Q ss_pred CCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceE
Q 036621 117 LNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWK 196 (376)
Q Consensus 117 ~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~ 196 (376)
....+.|||...+....+.......... ...+.+.+....-.++... .+ ..+.+++.+++.-.
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~~~h~~~------v~~~~~~~~~~~~~l~s~s----~d-------~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGGEGHRDW------VSCVRFSPNTLQPTIVSAS----WD-------KTVKVWNLSNCKLR 554 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSSTTSCSSC------EEEEEECSCSSSCEEEEEE----TT-------SCEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCcceeeccCCCCCCCc------EEEEEEeCCCCcceEEEEe----CC-------CeEEEEECCCCcEE
Confidence 3566788886554443333222111111 3455555544333333321 22 47888888765432
Q ss_pred e-ccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEECCeEEEEEEe
Q 036621 197 N-LKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIYYQSLSLLILD 273 (376)
Q Consensus 197 ~-~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~ 273 (376)
. ....... -.++.+ +|.+...+.. ...|..+|+.+.+-. ..+.... ....+.-..+...++...
T Consensus 555 ~~~~~h~~~----v~~v~~spdg~~l~sg~~-----Dg~i~iwd~~~~~~~-~~~~~~~---~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 555 STLAGHTGY----VSTVAVSPDGSLCASGGK-----DGVVLLWDLAEGKKL-YSLEANS---VIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp EEECCCSSC----EEEEEECTTSSEEEEEET-----TSBCEEEETTTTEEE-ECCBCSS---CEEEEEECSSSSEEEEEE
T ss_pred EEEcCCCCC----EEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCceE-EEecCCC---cEEEEEEcCCCcEEEEEc
Confidence 2 1111110 011111 4554444433 457888998776532 1222111 122333333333444444
Q ss_pred cCCCEEEEEEecCCceeeEEEEccCC----------------c--eeEeEEEeeCCcEEEEe-cCCEEEEEECC
Q 036621 274 NVDHCFKIWVMRKKNWIKQLTVGPFI----------------G--IFQPLLFWKKGAFFVES-NSSQLLLYEPG 328 (376)
Q Consensus 274 ~~~~~l~iW~l~~~~W~~~~~i~~~~----------------~--~~~~~~~~~~~~l~~~~-~~~~~~~yd~~ 328 (376)
+..+.||.++...=...... ... . ...-+.+..++..++.. .++.+.++|+.
T Consensus 622 --~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 622 --EHGIKIWDLESKSIVEDLKV-DLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --TTEEEEEETTTTEEEEEECC-CCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred --CCCEEEEECCCCCChhhhcc-ccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 56799999876221111111 000 0 02234556677766554 47788888875
No 214
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=30.81 E-value=2.4e+02 Score=23.80 Aligned_cols=138 Identities=11% Similarity=0.060 Sum_probs=77.3
Q ss_pred ceEEEEEcCCCceEeccCCCc-cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccc-eeeecCCCCCCCCCceEE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDY-TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEK-FQEIQGPCILESSLDVTL 260 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~-~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~~~~~~~~l 260 (376)
..+.+++..++.=...-.++. .+.. .-...++.+|.+... ...+.++|..+.+ -..|+.+ ... ...|
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~fge--Gi~~~g~~lyv~t~~-----~~~v~viD~~t~~v~~~i~~g-~~~---g~gl 112 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSYFGE--GLTLLNEKLYQVVWL-----KNIGFIYDRRTLSNIKNFTHQ-MKD---GWGL 112 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEE--EEEEETTEEEEEETT-----CSEEEEEETTTTEEEEEEECC-SSS---CCEE
T ss_pred CEEEEEECCCCCEEEEEecCCCcceE--EEEEeCCEEEEEEec-----CCEEEEEECCCCcEEEEEECC-CCC---eEEE
Confidence 588999998875322212322 2221 123335588888754 5689999998643 3445554 111 2334
Q ss_pred EEECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCc----eeEeEEE-eeCCcEEEEec-CCEEEEEECCCCCE-E
Q 036621 261 GIYYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG----IFQPLLF-WKKGAFFVESN-SSQLLLYEPGTGEL-R 333 (376)
Q Consensus 261 ~~~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~----~~~~~~~-~~~~~l~~~~~-~~~~~~yd~~~~~~-~ 333 (376)
..-+++|++.. . .. .|++++-..-..+.+| +... +..+..+ ..++.+|.... +..+.+.|+++++. +
T Consensus 113 t~Dg~~l~vs~-g--s~--~l~viD~~t~~v~~~I-~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 113 ATDGKILYGSD-G--TS--ILYEIDPHTFKLIKKH-NVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLG 186 (266)
T ss_dssp EECSSSEEEEC-S--SS--EEEEECTTTCCEEEEE-ECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEE
T ss_pred EECCCEEEEEC-C--CC--eEEEEECCCCcEEEEE-EECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEE
Confidence 44345566543 2 33 5677766666666776 4321 1111111 12577776554 56899999999874 4
Q ss_pred EEEE
Q 036621 334 DFEL 337 (376)
Q Consensus 334 ~v~~ 337 (376)
.+..
T Consensus 187 ~I~~ 190 (266)
T 2iwa_A 187 WILL 190 (266)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 4444
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=30.77 E-value=3.9e+02 Score=26.10 Aligned_cols=140 Identities=13% Similarity=0.107 Sum_probs=78.8
Q ss_pred ceEEEEEcCCC--c-eEeccCCCccccCCcceeE-eCceEEEEecccCCCCceEEEEEEcCc--cceeeecCCCCCCCCC
Q 036621 183 SLVAVYTLRTN--S-WKNLKPIDYTMRLSSERTY-FDGAFYWLLKLENDNDSYVILSFNMAD--EKFQEIQGPCILESSL 256 (376)
Q Consensus 183 ~~~~vyss~t~--~-W~~~~~~p~~~~~~~~~v~-~~G~lYwl~~~~~~~~~~~il~fD~~~--~~~~~i~~P~~~~~~~ 256 (376)
..+.+.+..++ . |+.+..-.... ...+. -++.+|+....+. ....|..+|+.+ +.|..+- |.... .
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~---~~~~~~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~l~-~~~~~--~ 365 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQ---WDFVDGVGDQLWFVSGDGA--PLKKIVRVDLSGSTPRFDTVV-PESKD--N 365 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSC---EEEEEEETTEEEEEECTTC--TTCEEEEEECSSSSCEEEEEE-CCCSS--E
T ss_pred ceEEEEECCCCCCcccEEecCCCCce---EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCccccEEEe-cCCCC--e
Confidence 57888888776 6 87765221100 11222 3456777765421 356899999988 5677663 22211 1
Q ss_pred ceEEEEECCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCce--eEeEEEeeCCc-EEEEec----CCEEEEEECC
Q 036621 257 DVTLGIYYQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGI--FQPLLFWKKGA-FFVESN----SSQLLLYEPG 328 (376)
Q Consensus 257 ~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~--~~~~~~~~~~~-l~~~~~----~~~~~~yd~~ 328 (376)
...+...++.|.+.... +....||+++- .. ....+ ..+.. ...+.+..+++ +++... ...++.||++
T Consensus 366 l~~~~~~~~~lv~~~~~--dg~~~l~~~~~~g~--~~~~l-~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 366 LESVGIAGNRLFASYIH--DAKSQVLAFDLDGK--PAGAV-SLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEEEEBTEEEEEEEE--TTEEEEEEEETTSC--EEEEC-BCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEEEECCEEEEEEEE--CCEEEEEEEeCCCC--ceeec-cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 12234457888777776 56777888763 22 33445 43221 22233334454 555433 2469999999
Q ss_pred CCCEEEE
Q 036621 329 TGELRDF 335 (376)
Q Consensus 329 ~~~~~~v 335 (376)
+++.+.+
T Consensus 441 tg~~~~l 447 (741)
T 1yr2_A 441 TAKTTPW 447 (741)
T ss_dssp TTEEEEC
T ss_pred CCcEEEE
Confidence 9886655
No 216
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=30.00 E-value=3e+02 Score=24.59 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=34.6
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCCCceEEEEECCeEEEEEEe
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESSLDVTLGIYYQSLSLLILD 273 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~l~~~~G~L~~~~~~ 273 (376)
+|.|||.... ...|.++|++...-..+ ..+.... ....|+..++.|++....
T Consensus 257 ~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~--~P~gl~v~~~~lywtd~~ 309 (400)
T 3p5b_L 257 SGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLA--HPFSLAVFEDKVFWTDII 309 (400)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTS--SEEEEEEETTEEEEEESS
T ss_pred CCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCC--CCEEEEEeCCEEEEecCC
Confidence 5899998754 56899999987655444 3322222 245667788888888753
No 217
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=29.96 E-value=2.4e+02 Score=23.54 Aligned_cols=95 Identities=13% Similarity=0.066 Sum_probs=56.9
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (376)
...|..+|+.+.+...... .+... -..+... +|++.+.... +..+.||.+.. +..+..+ ........+++.
T Consensus 194 d~~i~i~d~~~~~~~~~~~-~h~~~--v~~~~~s~~~~~l~s~s~--Dg~i~iwd~~~--~~~~~~~-~~~~~v~~~~~~ 265 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHI-GHTGY--LNTVTVSPDGSLCASGGK--DGQAMLWDLNE--GKHLYTL-DGGDIINALCFS 265 (340)
T ss_dssp TSCEEEEETTTTEEEEEEC-CCSSC--EEEEEECTTSSEEEEEET--TCEEEEEETTT--TEEEEEE-ECSSCEEEEEEC
T ss_pred CCEEEEEECCCCceeeEec-CCCCc--EEEEEECCCCCEEEEEeC--CCeEEEEEecc--Cceeeee-cCCceEEeeecC
Confidence 3467888888766533311 11111 1233333 6777666665 78999998765 3344444 333333445556
Q ss_pred eCCcEEEEecCCEEEEEECCCCCE
Q 036621 309 KKGAFFVESNSSQLLLYEPGTGEL 332 (376)
Q Consensus 309 ~~~~l~~~~~~~~~~~yd~~~~~~ 332 (376)
.++.++....++.+.+||.+++..
T Consensus 266 ~~~~~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 266 PNRYWLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp SSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCceeeccCCCEEEEEECCCCeE
Confidence 667777777788899999998754
No 218
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=29.53 E-value=3.5e+02 Score=25.22 Aligned_cols=190 Identities=11% Similarity=0.116 Sum_probs=96.8
Q ss_pred eceEEEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 109 CGIVFIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 109 ~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
+++++.........+||..|++...+...+. . ...+.-| +++-+..... .. .. ..+.++
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~------~~~~spD---G~~la~~~~~---~~---~~--~~i~~~ 180 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLPG----F------GFVSDIR---GDLIAGLGFF---GG---GR--VSLFTS 180 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEESS----C------EEEEEEE---TTEEEEEEEE---ET---TE--EEEEEE
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCCC----c------eEEECCC---CCEEEEEEEc---CC---CC--eEEEEE
Confidence 3466666555666799999998777653322 1 2233322 2332222211 11 11 467888
Q ss_pred EcCCCceEeccCCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCC-C--ce-EE-EEE
Q 036621 189 TLRTNSWKNLKPIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESS-L--DV-TL-GIY 263 (376)
Q Consensus 189 ss~t~~W~~~~~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~-~--~~-~l-~~~ 263 (376)
+..++.++.+..-..... .....=||...+..... ....|..+|+.+.+...+.-....... . .. .. ..-
T Consensus 181 d~~~g~~~~l~~~~~~~~--~~~~SpDG~~l~~~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 181 NLSSGGLRVFDSGEGSFS--SASISPGMKVTAGLETA---REARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp ETTTCCCEEECCSSCEEE--EEEECTTSCEEEEEECS---SCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECT
T ss_pred cCCCCCceEeecCCCccc--cceECCCCCEEEEccCC---CeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcC
Confidence 888888887653322110 11222367655533321 235899999998877622211110000 0 00 01 122
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEec-C---CEEEEEECCCCCEEEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESN-S---SQLLLYEPGTGELRDF 335 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~~yd~~~~~~~~v 335 (376)
+|++.+.... +..+.||.+ . +... . +... ..-+.+. ++.+++... + ..++.+|.++ +.+.+
T Consensus 256 dg~~~~~~~~--~g~~~l~~~-g-~~~~---~-~~~~-v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 256 DGRLAVVARR--EGRSAVFID-G-ERVE---A-PQGN-HGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp TSCEEEEEEE--TTEEEEEET-T-EEEC---C-CSSE-EEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred CCcEEEEEEc--CCcEEEEEE-C-Ceec---c-CCCc-eEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 6766666666 678999998 3 2111 1 2221 2334555 777665433 2 3588888876 44444
No 219
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=28.82 E-value=2.7e+02 Score=23.73 Aligned_cols=96 Identities=7% Similarity=0.059 Sum_probs=54.2
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCc---eeEeE
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG---IFQPL 305 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~---~~~~~ 305 (376)
...|..+|+.+.+.... +..+... -..+... +|++.+.... +..+.||-+.... .+..+ .... -..-+
T Consensus 205 d~~v~~wd~~~~~~~~~-~~~h~~~--v~~v~~~p~~~~l~s~s~--d~~v~iwd~~~~~--~~~~~-~~~~~~~~v~~~ 276 (340)
T 1got_B 205 DASAKLWDVREGMCRQT-FTGHESD--INAICFFPNGNAFATGSD--DATCRLFDLRADQ--ELMTY-SHDNIICGITSV 276 (340)
T ss_dssp TSCEEEEETTTCSEEEE-ECCCSSC--EEEEEECTTSSEEEEEET--TSCEEEEETTTTE--EEEEE-CCTTCCSCEEEE
T ss_pred CCcEEEEECCCCeeEEE-EcCCcCC--EEEEEEcCCCCEEEEEcC--CCcEEEEECCCCc--EEEEE-ccCCcccceEEE
Confidence 44788889877654222 1111111 1223333 5776666655 7889999987632 12223 2221 13345
Q ss_pred EEeeCCcEEEEe-cCCEEEEEECCCCCEE
Q 036621 306 LFWKKGAFFVES-NSSQLLLYEPGTGELR 333 (376)
Q Consensus 306 ~~~~~~~l~~~~-~~~~~~~yd~~~~~~~ 333 (376)
.+..++.+++.. .++.+.+||..+.+..
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 566777766554 4678999999887643
No 220
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=28.41 E-value=2.7e+02 Score=23.52 Aligned_cols=187 Identities=12% Similarity=0.101 Sum_probs=93.0
Q ss_pred eceEEEe-cCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEE
Q 036621 109 CGIVFIE-GLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAV 187 (376)
Q Consensus 109 ~Gll~~~-~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (376)
+|-.++. .....+.|||..+++...--.. .... ...+.+++.. . .++.. . .+ ..+.+
T Consensus 76 dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~---h~~~------v~~~~~~~~~-~-~l~s~-s---~D-------~~i~v 133 (319)
T 3frx_A 76 DGAYALSASWDKTLRLWDVATGETYQRFVG---HKSD------VMSVDIDKKA-S-MIISG-S---RD-------KTIKV 133 (319)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEEC---CSSC------EEEEEECTTS-C-EEEEE-E---TT-------SCEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCeeEEEcc---CCCc------EEEEEEcCCC-C-EEEEE-e---CC-------CeEEE
Confidence 4544444 4578899999999875431110 1111 3455555432 2 22222 1 22 46777
Q ss_pred EEcCCCceEeccCCCc-----cccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEE
Q 036621 188 YTLRTNSWKNLKPIDY-----TMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGI 262 (376)
Q Consensus 188 yss~t~~W~~~~~~p~-----~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~ 262 (376)
++.+...-........ .+.. .....-+|.....+. ....|..+|+.+.+.... +..+... -..+..
T Consensus 134 wd~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~-----~d~~i~~wd~~~~~~~~~-~~~h~~~--v~~~~~ 204 (319)
T 3frx_A 134 WTIKGQCLATLLGHNDWVSQVRVVP-NEKADDDSVTIISAG-----NDKMVKAWNLNQFQIEAD-FIGHNSN--INTLTA 204 (319)
T ss_dssp EETTSCEEEEECCCSSCEEEEEECC-C------CCEEEEEE-----TTSCEEEEETTTTEEEEE-ECCCCSC--EEEEEE
T ss_pred EECCCCeEEEEeccCCcEEEEEEcc-CCCCCCCccEEEEEe-----CCCEEEEEECCcchhhee-ecCCCCc--EEEEEE
Confidence 7776543333221111 0100 001111232322222 245788889877554322 1111111 223333
Q ss_pred E-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCC
Q 036621 263 Y-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGE 331 (376)
Q Consensus 263 ~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~ 331 (376)
. +|++.+.... +..+.||.+... ..+..+ .......-+++..++.++....+..+.+|+.+++.
T Consensus 205 sp~g~~l~s~~~--dg~i~iwd~~~~--~~~~~~-~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~ 269 (319)
T 3frx_A 205 SPDGTLIASAGK--DGEIMLWNLAAK--KAMYTL-SAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQY 269 (319)
T ss_dssp CTTSSEEEEEET--TCEEEEEETTTT--EEEEEE-ECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEE
T ss_pred cCCCCEEEEEeC--CCeEEEEECCCC--cEEEEe-cCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCe
Confidence 3 6776666665 789999998762 233444 22222444666777877777667778888887654
No 221
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=27.68 E-value=3.1e+02 Score=23.91 Aligned_cols=98 Identities=10% Similarity=0.102 Sum_probs=53.4
Q ss_pred ceEEEEEEcCcc--ceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCC-----ce
Q 036621 230 SYVILSFNMADE--KFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFI-----GI 301 (376)
Q Consensus 230 ~~~il~fD~~~~--~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~-----~~ 301 (376)
...|..+|+... ....+.. +... -..+.-. +|+..+.... +..+.||-+....-.......+.. ..
T Consensus 227 D~~v~~wd~~~~~~~~~~~~~--h~~~--v~~v~~~p~~~~l~s~s~--D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
T 3iz6_a 227 DTTVRLWDLRITSRAVRTYHG--HEGD--INSVKFFPDGQRFGTGSD--DGTCRLFDMRTGHQLQVYNREPDRNDNELPI 300 (380)
T ss_dssp TSCEEEEETTTTCCCCEEECC--CSSC--CCEEEECTTSSEEEEECS--SSCEEEEETTTTEEEEEECCCCSSSCCSSCS
T ss_pred CCeEEEEECCCCCcceEEECC--cCCC--eEEEEEecCCCeEEEEcC--CCeEEEEECCCCcEEEEecccccccccccCc
Confidence 447888998632 2222221 1111 1233333 5666555555 788999998763322222110100 01
Q ss_pred eEeEEEeeCCcEEEEec-CCEEEEEECCCCCEE
Q 036621 302 FQPLLFWKKGAFFVESN-SSQLLLYEPGTGELR 333 (376)
Q Consensus 302 ~~~~~~~~~~~l~~~~~-~~~~~~yd~~~~~~~ 333 (376)
..-+++..++.+++... ++.+.+||..+++..
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 34466677788766554 678999999877643
No 222
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.35 E-value=4.6e+02 Score=25.83 Aligned_cols=121 Identities=13% Similarity=0.226 Sum_probs=67.4
Q ss_pred eEeCceEEEEecccC-----CCCceEEEEEEcCc--------cceeeecCCCCCCCCCceEEEEECCeEEEEEEecCCCE
Q 036621 212 TYFDGAFYWLLKLEN-----DNDSYVILSFNMAD--------EKFQEIQGPCILESSLDVTLGIYYQSLSLLILDNVDHC 278 (376)
Q Consensus 212 v~~~G~lYwl~~~~~-----~~~~~~il~fD~~~--------~~~~~i~~P~~~~~~~~~~l~~~~G~L~~~~~~~~~~~ 278 (376)
-..+|.+|......- ......|++.|+.+ .+|+.+-.|..... ...+...++.|.+.........
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~l~~~~~~~~~~~ 373 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEV--FNFISTTKDRVFLATYDNVVAK 373 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEE--EEEEEECSSCEEEEEEETTEEE
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCe--EEEEEEECCEEEEEEEECCEEE
Confidence 366888888663310 01355799999876 36776433332211 2234445777777777644556
Q ss_pred EEEEEecCCceeeEEEEccCCc--eeEeEEEeeCC-cEEEEec----CCEEEEEECCCCCEEEEE
Q 036621 279 FKIWVMRKKNWIKQLTVGPFIG--IFQPLLFWKKG-AFFVESN----SSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 279 l~iW~l~~~~W~~~~~i~~~~~--~~~~~~~~~~~-~l~~~~~----~~~~~~yd~~~~~~~~v~ 336 (376)
+.++.++...|.....+ +++. .........++ .+++... ...++.||++ ++.+.+.
T Consensus 374 l~~~~~~~g~~~~~~~i-~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~ 436 (711)
T 4hvt_A 374 VVTFTLENEQWTKPVVL-KLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIR 436 (711)
T ss_dssp EEEECEETTEECCCEEE-CCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEE
T ss_pred EEEEECCCCceEEEecc-CCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEe
Confidence 66666656778654324 3432 22223322333 4555433 3579999988 6666554
No 223
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=26.38 E-value=2.9e+02 Score=23.15 Aligned_cols=182 Identities=5% Similarity=0.007 Sum_probs=87.9
Q ss_pred eEEEecCCCeEEEEecCccc----ceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEE
Q 036621 111 IVFIEGLNNRITLWNIATRE----SITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVA 186 (376)
Q Consensus 111 ll~~~~~~~~~~v~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (376)
+|+.......+.|||..+++ ...+. ..... ...+.+.+. +.+.++... .+ ..+.
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~~----~~~~~------v~~~~~~~~-~~~~l~~~~----~d-------g~i~ 82 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQAKNVDLLQSL----RYKHP------LLCCNFIDN-TDLQIYVGT----VQ-------GEIL 82 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEEEE----ECSSC------EEEEEEEES-SSEEEEEEE----TT-------SCEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccccceeee----ecCCc------eEEEEECCC-CCcEEEEEc----CC-------CeEE
Confidence 34444456788999988776 32222 11111 345555543 342333331 22 4788
Q ss_pred EEEc-CCCceEeccC--CCccccCCcceeEeC-ceEEEEecccCCCCceEEEEEEcCc---------cceeeecCCCCCC
Q 036621 187 VYTL-RTNSWKNLKP--IDYTMRLSSERTYFD-GAFYWLLKLENDNDSYVILSFNMAD---------EKFQEIQGPCILE 253 (376)
Q Consensus 187 vyss-~t~~W~~~~~--~p~~~~~~~~~v~~~-G~lYwl~~~~~~~~~~~il~fD~~~---------~~~~~i~~P~~~~ 253 (376)
+|+. .++.-..+.. ...... .+.+. |.....+.. ...|..+|+.+ .+... .+. .
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~----~l~~~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~-~~~-~-- 149 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGIC----RICKYGDDKLIAASW-----DGLIEVIDPRNYGDGVIAVKNLNSN-NTK-V-- 149 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEE----EEEEETTTEEEEEET-----TSEEEEECHHHHTTBCEEEEESCSS-SSS-S--
T ss_pred EEEeccCCceEeccccCCCCceE----EEEeCCCCEEEEEcC-----CCeEEEEcccccccccccccCCeee-EEe-e--
Confidence 8888 7766555443 222111 11111 333333332 45788888875 22111 111 1
Q ss_pred CCCceEEEEECCeEEEEEEecCCCEEEEEEecC-CceeeEEEEccCCceeEeEEEee-CCcEEE-EecCCEEEEEECCCC
Q 036621 254 SSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTVGPFIGIFQPLLFWK-KGAFFV-ESNSSQLLLYEPGTG 330 (376)
Q Consensus 254 ~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~yd~~~~ 330 (376)
......+....+. .++... +..+.+|.+.. ..-..............-+.+.. ++..++ ...++.+.+||.+++
T Consensus 150 ~~~v~~~~~~~~~-l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 150 KNKIFTMDTNSSR-LIVGMN--NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp CCCEEEEEECSSE-EEEEES--TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred CCceEEEEecCCc-EEEEeC--CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 1112233333444 333334 67999999876 33222222212333234455555 566544 445677888777664
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=26.08 E-value=2.9e+02 Score=23.10 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=18.6
Q ss_pred EEeeCCcEEEEecCCEEEEEECCCCCEEEEE
Q 036621 306 LFWKKGAFFVESNSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~~yd~~~~~~~~v~ 336 (376)
.+..++.+++...++.++.||..++....+.
T Consensus 221 ~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~ 251 (330)
T 3hxj_A 221 AISEDGTIYVTSLDGHLYAINPDGTEKWRFK 251 (330)
T ss_dssp EECTTSCEEEEETTTEEEEECTTSCEEEEEE
T ss_pred EECCCCeEEEEcCCCeEEEECCCCCEeEEee
Confidence 3344556666666677777776655554443
No 225
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=25.49 E-value=4.9e+02 Score=25.58 Aligned_cols=200 Identities=13% Similarity=0.156 Sum_probs=103.2
Q ss_pred eeceEEEecCCCeEEEEecCcccceecCCCcc---CCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccce
Q 036621 108 YCGIVFIEGLNNRITLWNIATRESITLPKYRA---IIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSL 184 (376)
Q Consensus 108 ~~Gll~~~~~~~~~~v~NP~T~~~~~LP~~~~---~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (376)
.+|.|.+......++++||.++++........ ...... ...+..|+.. -+.++. . ..
T Consensus 224 ~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~-----i~~i~~d~~g----~lWigt---~--------~G 283 (795)
T 4a2l_A 224 SPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNY-----IRSLAMDSQN----RLWIGT---F--------ND 283 (795)
T ss_dssp ETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSB-----EEEEEECTTS----CEEEEE---S--------SC
T ss_pred CCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCe-----EEEEEEcCCC----CEEEEe---C--------Ch
Confidence 45666555444568889999888776653321 111111 2344444322 133322 1 24
Q ss_pred EEEEEcCCCceEeccCCC---cccc-CCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecC-CC--CCCCC
Q 036621 185 VAVYTLRTNSWKNLKPID---YTMR-LSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQG-PC--ILESS 255 (376)
Q Consensus 185 ~~vyss~t~~W~~~~~~p---~~~~-~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~-P~--~~~~~ 255 (376)
+.+|+..++.++.....+ .... ..-.+++. +|. .|++.. ...|..||..+..|..+.. +. .....
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~ 357 (795)
T 4a2l_A 284 LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY-----FGGLNYYHPIRNRFKNIRNIPYKNSLSDN 357 (795)
T ss_dssp EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES-----SSCEEEECGGGGSSEEECCCTTSSSCSCS
T ss_pred hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC-----CCCeEEeCCCcccceEEcCCCCCCCCCCC
Confidence 677888888887664221 1111 10112332 355 466654 3478899999888887733 22 11111
Q ss_pred CceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEc--c---CC-ceeEeEEEeeCCc-EEEEecCCEEEEEEC
Q 036621 256 LDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVG--P---FI-GIFQPLLFWKKGA-FFVESNSSQLLLYEP 327 (376)
Q Consensus 256 ~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~--~---~~-~~~~~~~~~~~~~-l~~~~~~~~~~~yd~ 327 (376)
.-..+.+. +|.|.+.... ..+..|..+...+.....-. + +. ....-++...++. +.+-..++.++.||+
T Consensus 358 ~V~~i~~d~~g~lWiGt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWIGTND---GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp SEEEEEECTTSCEEEEESS---SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred eeEEEEECCCCCEEEEECC---CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 12334443 5667765432 34554444334444332100 0 11 1123334455677 777666688999999
Q ss_pred CCCCEEEEE
Q 036621 328 GTGELRDFE 336 (376)
Q Consensus 328 ~~~~~~~v~ 336 (376)
++++++.+.
T Consensus 435 ~~~~~~~~~ 443 (795)
T 4a2l_A 435 NSGQVENFN 443 (795)
T ss_dssp TTCCEEEEC
T ss_pred CCCcEEEee
Confidence 998887663
No 226
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=25.04 E-value=3e+02 Score=22.88 Aligned_cols=180 Identities=8% Similarity=0.139 Sum_probs=83.7
Q ss_pred ecCCCeEEEEecCccccee-cCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCC
Q 036621 115 EGLNNRITLWNIATRESIT-LPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTN 193 (376)
Q Consensus 115 ~~~~~~~~v~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~ 193 (376)
......+.+||..+++... ++... .. ...+.+.+.. .+ +.... .+ ..+.+|+.+++
T Consensus 125 ~~~d~~i~iwd~~~~~~~~~~~~~~----~~------v~~~~~~~~~-~~--l~~~~---~d-------~~i~~wd~~~~ 181 (312)
T 4ery_A 125 GSFDESVRIWDVKTGKCLKTLPAHS----DP------VSAVHFNRDG-SL--IVSSS---YD-------GLCRIWDTASG 181 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCS----SC------EEEEEECTTS-SE--EEEEE---TT-------SCEEEEETTTC
T ss_pred EeCCCcEEEEECCCCEEEEEecCCC----Cc------EEEEEEcCCC-CE--EEEEe---CC-------CcEEEEECCCC
Confidence 3356778999988876543 22111 11 3455565532 22 22211 22 46888888775
Q ss_pred ceEec-c-CCCccccCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceee-ecCCCCCCCCCceEEEEECCeEEEE
Q 036621 194 SWKNL-K-PIDYTMRLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQGPCILESSLDVTLGIYYQSLSLL 270 (376)
Q Consensus 194 ~W~~~-~-~~p~~~~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~l~~~~G~L~~~ 270 (376)
.-... . ....... .-...-+|.....+.. ...|..||+.+.+... +.................+|.+.+.
T Consensus 182 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 254 (312)
T 4ery_A 182 QCLKTLIDDDNPPVS--FVKFSPNGKYILAATL-----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 254 (312)
T ss_dssp CEEEEECCSSCCCEE--EEEECTTSSEEEEEET-----TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE
T ss_pred ceeeEEeccCCCceE--EEEECCCCCEEEEEcC-----CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE
Confidence 43221 1 1000000 0011113443333332 4578899998765433 2222211110011122224555444
Q ss_pred EEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEe---cCCEEEEEECC
Q 036621 271 ILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVES---NSSQLLLYEPG 328 (376)
Q Consensus 271 ~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~yd~~ 328 (376)
... +..+.+|.++..+ .+..+........-+.+..++.++... .++.+.+++.+
T Consensus 255 g~~--dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 255 GSE--DNLVYIWNLQTKE--IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCT--TSCEEEEETTTCC--EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ECC--CCEEEEEECCCch--hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 444 7789999987632 334442122223334555566665543 25566666643
No 227
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=24.94 E-value=4.1e+02 Score=24.45 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=54.9
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (376)
...|..+|...+....+...... -..+... +|++.+.... +..+.||..+. ..+..+.....-..-+++.
T Consensus 447 d~~v~~w~~~~~~~~~~~~~~~~----v~~~~~spd~~~las~~~--d~~i~iw~~~~---~~~~~~~~h~~~v~~l~~s 517 (577)
T 2ymu_A 447 DKTVKLWNRNGQLLQTLTGHSSS----VRGVAFSPDGQTIASASD--DKTVKLWNRNG---QLLQTLTGHSSSVRGVAFS 517 (577)
T ss_dssp TSEEEEEETTSCEEEEEECCSSC----EEEEEECTTSCEEEEEET--TSEEEEEETTS---CEEEEEECCSSCEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEcCCCCC----EEEEEEcCCCCEEEEEeC--CCEEEEEcCCC---CEEEEEeCCCCCEEEEEEc
Confidence 44788888776655544322111 1233333 6776666555 78899998543 2333341122223445666
Q ss_pred eCCcEEEE-ecCCEEEEEECCCCCEEEE
Q 036621 309 KKGAFFVE-SNSSQLLLYEPGTGELRDF 335 (376)
Q Consensus 309 ~~~~l~~~-~~~~~~~~yd~~~~~~~~v 335 (376)
.++.+++. ..++.+.+||...+..+.+
T Consensus 518 ~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 518 PDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 77775554 4577899999766555444
No 228
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=24.77 E-value=3.2e+02 Score=24.06 Aligned_cols=65 Identities=9% Similarity=0.095 Sum_probs=39.4
Q ss_pred CCeEEEEEEecCCCEEEEEEecCCceeeEEEEc-c-CCceeEeEEEeeCCcEEEE-ecCCEEEEEECCCCCE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVG-P-FIGIFQPLLFWKKGAFFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~-~-~~~~~~~~~~~~~~~l~~~-~~~~~~~~yd~~~~~~ 332 (376)
+|.+.+.... +..+.+|-+.... .+..+. + ......-+++..++..++. ..++.+.+||+++++.
T Consensus 181 ~~~~l~~~~~--d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTN--LSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEET--TSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeC--CCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE
Confidence 4666666655 7899999987632 233331 1 1222344555666766554 4467799999998654
No 229
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=24.32 E-value=4.8e+02 Score=25.07 Aligned_cols=192 Identities=11% Similarity=0.001 Sum_probs=0.0
Q ss_pred eEEEEecCc-ccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEEEcCCCceEec
Q 036621 120 RITLWNIAT-RESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVYTLRTNSWKNL 198 (376)
Q Consensus 120 ~~~v~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (376)
.++++|..+ ++...+.......... ..+.+ .++++-++.. .+..... ..+.+++..++..+.+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~-------~~~~~--pDg~~l~~~~-----~~~~~~~--~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYL-------ARVNW--RDPQHLSFQR-----QSRDQKK--LDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEE-------EEEEE--EETTEEEEEE-----EETTSSE--EEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEE-------EEEEe--CCCCEEEEEE-----ecccCCe--EEEEEEECCCCceEEE
Q ss_pred cCCCc-cc--cCCcceeEeCceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE-EEEECCeEEEEEEec
Q 036621 199 KPIDY-TM--RLSSERTYFDGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT-LGIYYQSLSLLILDN 274 (376)
Q Consensus 199 ~~~p~-~~--~~~~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~-l~~~~G~L~~~~~~~ 274 (376)
..-.. .+ ........-+|.+++..... ....|..+|...+ ...+..+........ ...-++.|++.....
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~---g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGSILWSSERT---GFQHLYRIDSKGK---AAALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSCEEEEECTT---SSCEEEEECSSSC---EEESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCcCCcCCceEECCCCeEEEEecCC---CccEEEEEcCCCC---eeeeeecceEEEeEeEEeCCCCEEEEEEeCC
Q ss_pred CCCEEEEEEecCCceeeEEEEccCCceeEeEEEeeCCcEEEEecCC-----EEEEEECCCCCEEEE
Q 036621 275 VDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSS-----QLLLYEPGTGELRDF 335 (376)
Q Consensus 275 ~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~yd~~~~~~~~v 335 (376)
....+.||.++... .....+ ....-...+.+..+++.++..... .++.+|.+++..+.+
T Consensus 402 ~~~~~~l~~~~~~g-~~~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 402 SARESQIYAVPLQG-GQPQRL-SKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp CTTCBEEEEEETTC-CCCEEC-CCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred CCceEEEEEEEcCC-CCeeec-ccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
No 230
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=24.19 E-value=1.1e+02 Score=22.37 Aligned_cols=42 Identities=12% Similarity=0.197 Sum_probs=29.2
Q ss_pred eEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEE
Q 036621 120 RITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLIL 169 (376)
Q Consensus 120 ~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 169 (376)
.++.+||.|++|. |......... .+.+..|+..+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~~gvs------~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGPQAFS------RVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSCCCCE------EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcee--ECCCCCCCcc------EEEEEEeCCCCEEEEEEEE
Confidence 5678999999975 4332111111 4788899999999999873
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=23.91 E-value=2.6e+02 Score=23.39 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=14.0
Q ss_pred eeCCcEEEEecCCEEEEEECC
Q 036621 308 WKKGAFFVESNSSQLLLYEPG 328 (376)
Q Consensus 308 ~~~~~l~~~~~~~~~~~yd~~ 328 (376)
..++.+++...++.++.||++
T Consensus 145 ~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 145 SEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp CTTSCEEEECTTSEEEEECTT
T ss_pred cCCCEEEEEcCCCEEEEECCC
Confidence 445666665555778888877
No 232
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=23.64 E-value=4.8e+02 Score=24.76 Aligned_cols=107 Identities=9% Similarity=0.018 Sum_probs=61.6
Q ss_pred CceEEEEecccCCCCceEEEEEEcCcccee-eecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeE
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQ-EIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQ 292 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~ 292 (376)
++.+|.... ....|..+|..+.+-. .++..... ..+... +|+..++... +..+.+|-+..+.-..+
T Consensus 166 ~~~~~V~~~-----~~~~V~viD~~t~~v~~~i~~g~~p-----~~v~~SpDGr~lyv~~~--dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 166 ENLFSVTLR-----DAGQIALIDGSTYEIKTVLDTGYAV-----HISRLSASGRYLFVIGR--DGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp GGEEEEEET-----TTTEEEEEETTTCCEEEEEECSSCE-----EEEEECTTSCEEEEEET--TSEEEEEETTSSSCCEE
T ss_pred CceEEEEeC-----CCCeEEEEECCCCeEEEEEeCCCCc-----cceEECCCCCEEEEEcC--CCeEEEEECCCCCCcEe
Confidence 345555543 3569999999886543 34432221 223333 6775444443 56788887742233556
Q ss_pred EEEccCCceeEeEEEe----eCCcEEEEec--CCEEEEEECCCCCEEE
Q 036621 293 LTVGPFIGIFQPLLFW----KKGAFFVESN--SSQLLLYEPGTGELRD 334 (376)
Q Consensus 293 ~~i~~~~~~~~~~~~~----~~~~l~~~~~--~~~~~~yd~~~~~~~~ 334 (376)
.+| +.....+-++++ .+|+.++..+ ...+.++|.+|.+..+
T Consensus 234 ~~i-~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 234 AEI-KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 280 (567)
T ss_dssp EEE-ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred EEE-ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE
Confidence 677 544334456666 3676544433 5789999988876443
No 233
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=23.04 E-value=4.8e+02 Score=24.64 Aligned_cols=144 Identities=5% Similarity=-0.045 Sum_probs=74.0
Q ss_pred ceEEEEEcC-CCceEeccCCCcc-ccCCccee-EeCceEEEEecccCCCCceEEEEEEcCccceeee-cCCCCCCCC-C-
Q 036621 183 SLVAVYTLR-TNSWKNLKPIDYT-MRLSSERT-YFDGAFYWLLKLENDNDSYVILSFNMADEKFQEI-QGPCILESS-L- 256 (376)
Q Consensus 183 ~~~~vyss~-t~~W~~~~~~p~~-~~~~~~~v-~~~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~-~- 256 (376)
..+.+++.. ++.+.....+... -....... .-||.+|+..... ....|..+|+.+.++..+ ......... +
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~---~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~ 293 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT---GWWNLHRVDPATGAATQLCRREEEFAGPLWT 293 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT---SSCEEEEECTTTCCEEESSCCSSBSSCCCCS
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC---CCeEEEEEECCCCceeecccccccccCcccc
Confidence 478888888 5633322211110 00001112 2278888877553 244899999988777665 322221100 0
Q ss_pred --ceEEEEE-CCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCC-ceeEeEEEeeCCcEEEEec-C---CEEEEEE
Q 036621 257 --DVTLGIY-YQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFI-GIFQPLLFWKKGAFFVESN-S---SQLLLYE 326 (376)
Q Consensus 257 --~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~-~~~~~~~~~~~~~l~~~~~-~---~~~~~yd 326 (376)
...+... +|++.+.... ....||.++- .. ...+ ... .....+....++.+++... . ..++.+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~---~~~~l~~~d~~~~~---~~~l-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 294 PGMRWFAPLANGLIAVVHGK---GAAVLGILDPESGE---LVDA-AGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp TTCCSEEECTTSCEEEEEBS---SSCEEEEEETTTTE---EEEC-CSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred ccCceEeEeCCCEEEEEEEc---CccEEEEEECCCCc---EEEe-cCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 1223444 5776554443 5678898764 33 2334 221 1122221123344555433 2 2688999
Q ss_pred CCCCCEEEEE
Q 036621 327 PGTGELRDFE 336 (376)
Q Consensus 327 ~~~~~~~~v~ 336 (376)
+++++.+.+.
T Consensus 367 ~~~g~~~~l~ 376 (662)
T 3azo_A 367 TVTGRARTIG 376 (662)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCceEEee
Confidence 9999888774
No 234
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=23.00 E-value=1.8e+02 Score=25.68 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=19.2
Q ss_pred eCCcEEEEecCCEEEEEECCCCCEEEE
Q 036621 309 KKGAFFVESNSSQLLLYEPGTGELRDF 335 (376)
Q Consensus 309 ~~~~l~~~~~~~~~~~yd~~~~~~~~v 335 (376)
.++.+|+-..+++++..|.+|++...-
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 345566666678899999998875543
No 235
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=23.00 E-value=1.3e+02 Score=26.83 Aligned_cols=30 Identities=13% Similarity=0.291 Sum_probs=25.7
Q ss_pred CCeEEEEEEecCCCEEEEEEecC-CceeeEEEE
Q 036621 264 YQSLSLLILDNVDHCFKIWVMRK-KNWIKQLTV 295 (376)
Q Consensus 264 ~G~L~~~~~~~~~~~l~iW~l~~-~~W~~~~~i 295 (376)
.+.+|++... +..+.+|...+ ..|+++++.
T Consensus 52 ~~~~~~~~~~--~~~v~lw~~~~~~~~~~~~~~ 82 (356)
T 2w18_A 52 CKEPCIITAC--EDVVSLWKALDAWQWEKLYTW 82 (356)
T ss_dssp -CEEEEEEEE--SSEEEEEEESSSSBEEEEEEE
T ss_pred CCccEEEEec--cceEEEcccCCCccceeeEEE
Confidence 3458999998 89999999998 889998877
No 236
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=22.75 E-value=5e+02 Score=24.66 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=57.7
Q ss_pred cceeEeCceEEEEecccCCCCceEEEEEEcCc--cceeee-cCCCCCCC---CCceEEEEECCeEEEEEEecCCCEEEEE
Q 036621 209 SERTYFDGAFYWLLKLENDNDSYVILSFNMAD--EKFQEI-QGPCILES---SLDVTLGIYYQSLSLLILDNVDHCFKIW 282 (376)
Q Consensus 209 ~~~v~~~G~lYwl~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~~~---~~~~~l~~~~G~L~~~~~~~~~~~l~iW 282 (376)
..+++.+|.+|..... ..+.++|..+ +.|+.- ..|..... .....++..+|++++... +..+.-.
T Consensus 62 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---dg~l~Al 132 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---DASVVAL 132 (582)
T ss_dssp CCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---TTEEEEE
T ss_pred eccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---CCEEEEE
Confidence 3478899999998753 2499999865 456543 22221100 001223345666655433 2333222
Q ss_pred EecC--CceeeEEEEccC---CceeEeEEEee--CC--cEEEEec------CCEEEEEECCCCCEEE
Q 036621 283 VMRK--KNWIKQLTVGPF---IGIFQPLLFWK--KG--AFFVESN------SSQLLLYEPGTGELRD 334 (376)
Q Consensus 283 ~l~~--~~W~~~~~i~~~---~~~~~~~~~~~--~~--~l~~~~~------~~~~~~yd~~~~~~~~ 334 (376)
-.+. ..|+....- +. .....|+.... ++ .|++-.. ++.++.||.+|++...
T Consensus 133 D~~TG~~~W~~~~~~-~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 133 NKNTGKVVWKKKFAD-HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp ESSSCCEEEEEECSC-GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred ECCCCCEEeeecCCC-CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 2222 456543211 00 11123443322 12 3333221 5689999999987554
No 237
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=22.71 E-value=3.4e+02 Score=22.78 Aligned_cols=192 Identities=9% Similarity=0.034 Sum_probs=92.8
Q ss_pred ceE-EEecCCCeEEEEecCcccceecCCCccCCCCccccccceEEEeeeCCCCCeEEEEEEEEecCCCCCCcccceEEEE
Q 036621 110 GIV-FIEGLNNRITLWNIATRESITLPKYRAIIPQYTRVFGTKIGFGLDPKTKDYKVVLILTLWDEKRDSSCAFSLVAVY 188 (376)
Q Consensus 110 Gll-~~~~~~~~~~v~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (376)
|-+ +.....+.+.+||..+++....-.. .... ...+.+.+.++.+-+..- .+ ..+.+|
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---~~~~------i~~~~~~~~~~~~l~s~~-----~d-------g~i~iw 143 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVG---HGNA------INELKFHPRDPNLLLSVS-----KD-------HALRLW 143 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEES---CCSC------EEEEEECSSCTTEEEEEE-----TT-------SCEEEE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecC---CCCc------EEEEEECCCCCCEEEEEe-----CC-------CeEEEE
Confidence 444 4444667899999998875542211 1111 456777664444433322 22 478888
Q ss_pred EcCCCceEecc-CCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceee-ec-----------------
Q 036621 189 TLRTNSWKNLK-PIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQE-IQ----------------- 247 (376)
Q Consensus 189 ss~t~~W~~~~-~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~-i~----------------- 247 (376)
+..++.-...- .+...-.. -..+.+ +|.....+.. ...|..||+.+.+... +.
T Consensus 144 d~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (366)
T 3k26_A 144 NIQTDTLVAIFGGVEGHRDE-VLSADYDLLGEKIMSCGM-----DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQ 217 (366)
T ss_dssp ETTTTEEEEEECSTTSCSSC-EEEEEECTTSSEEEEEET-----TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCE
T ss_pred EeecCeEEEEecccccccCc-eeEEEECCCCCEEEEecC-----CCCEEEEECCCCccccccceeEEecCCCCcccccce
Confidence 88876432221 11110000 011111 3443333332 4478888987654321 11
Q ss_pred ---CCCCC----CCCCceEEEEECCeEEEEEEecCCCEEEEEEecC-C-----------ceeeEEEEccCCceeEeEEEe
Q 036621 248 ---GPCIL----ESSLDVTLGIYYQSLSLLILDNVDHCFKIWVMRK-K-----------NWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 248 ---~P~~~----~~~~~~~l~~~~G~L~~~~~~~~~~~l~iW~l~~-~-----------~W~~~~~i~~~~~~~~~~~~~ 308 (376)
.|... ....-..+... |.+.+.... +..+.+|.+.. . ....+..+........-+++.
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 218 KIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSC--ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp EECCCSEEECSSCSSCCCEEEEE-TTEEEEECS--SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred eeccCccccccCCcceEEEEEEc-CCEEEEEec--CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 00000 00011222223 665555445 78999999876 1 122233331111112223444
Q ss_pred eC--CcEEEEe-cCCEEEEEECCCCC
Q 036621 309 KK--GAFFVES-NSSQLLLYEPGTGE 331 (376)
Q Consensus 309 ~~--~~l~~~~-~~~~~~~yd~~~~~ 331 (376)
.+ +.+++.. .++.+.+||+++++
T Consensus 295 ~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 295 MDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp ECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCCcEEEEEecCCcEEEEECCCCC
Confidence 55 6665544 46789999999874
No 238
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=22.01 E-value=3.6e+02 Score=22.80 Aligned_cols=64 Identities=5% Similarity=0.085 Sum_probs=35.9
Q ss_pred ECCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCc---eeEeEEEee--CCcEEE-EecCCEEEEEECCC
Q 036621 263 YYQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG---IFQPLLFWK--KGAFFV-ESNSSQLLLYEPGT 329 (376)
Q Consensus 263 ~~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~---~~~~~~~~~--~~~l~~-~~~~~~~~~yd~~~ 329 (376)
..+.+.+.... +..+.||......|...... .... ....+.+.. ++.++. ...++.+.+||+++
T Consensus 259 s~~~~l~s~~~--dg~v~iw~~~~~~~~~~~~~-~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 259 GFNGLIASVGA--DGVLAVYEEVDGEWKVFAKR-ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CTTSCEEEEET--TSCEEEEEEETTEEEEEEEE-SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cCCCEEEEEeC--CCEEEEEEcCCCceEEEecc-ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 34444344444 78899999988888776654 2211 123334443 455544 44578899999875
No 239
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.85 E-value=3.8e+02 Score=22.96 Aligned_cols=144 Identities=10% Similarity=-0.016 Sum_probs=72.2
Q ss_pred ceEEEEEcCCCceEeccCCCccccCCcceeE-e-Cce-EEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE
Q 036621 183 SLVAVYTLRTNSWKNLKPIDYTMRLSSERTY-F-DGA-FYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT 259 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p~~~~~~~~~v~-~-~G~-lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~ 259 (376)
..+.+++..++..+.+...+... ....+ - +|. +++............|..+|+.+.+...+.-..... ....
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~---~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~--~~~~ 242 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWL---GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGE--SCTH 242 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCE---EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTE--EEEE
T ss_pred ceEEEEECCCCcEEeeccCCccc---ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCc--cccc
Confidence 46777887777665554111101 11122 1 354 666653211001257888999877765553211000 0112
Q ss_pred EEEE-CCe-EEEEEEecCCCE--EEEEEecCCceeeEEEEccCCceeEeEEEee-CCcEEEEe-----------------
Q 036621 260 LGIY-YQS-LSLLILDNVDHC--FKIWVMRKKNWIKQLTVGPFIGIFQPLLFWK-KGAFFVES----------------- 317 (376)
Q Consensus 260 l~~~-~G~-L~~~~~~~~~~~--l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~l~~~~----------------- 317 (376)
+.-. +|+ |.++........ +.+|-++......+... + .. . ..+.. +|++++..
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~--~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-P--PC-S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C--SE-E-EEEECSSSSEEEEEECCC----------CCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-C--CC-C-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 2223 666 555555433334 66666555444444433 2 21 2 44455 67765542
Q ss_pred cCCEEEEEECCCCCEEEEE
Q 036621 318 NSSQLLLYEPGTGELRDFE 336 (376)
Q Consensus 318 ~~~~~~~yd~~~~~~~~v~ 336 (376)
.+..++.+|+++++.+.+.
T Consensus 318 ~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp CCCEEEEEETTTTBCCEEE
T ss_pred CCCcEEEEecccCceEEcc
Confidence 2367999999998876654
No 240
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=21.16 E-value=4.1e+02 Score=23.14 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=52.1
Q ss_pred ceEEEEEEcCccceeeecCCCCCCCCCceEEEEE-CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCceeEeEEEe
Q 036621 230 SYVILSFNMADEKFQEIQGPCILESSLDVTLGIY-YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIGIFQPLLFW 308 (376)
Q Consensus 230 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (376)
...|..+|+.+.+.... +..+... -..+.-. +|+..+.... +..+.||.+....-.. .+ ....-...+.+.
T Consensus 144 d~~i~iwd~~~~~~~~~-~~~h~~~--v~~~~~~p~~~~l~s~s~--d~~v~iwd~~~~~~~~--~~-~~~~~v~~~~~~ 215 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMI-LQGHEQD--IYSLDYFPSGDKLVSGSG--DRTVRIWDLRTGQCSL--TL-SIEDGVTTVAVS 215 (393)
T ss_dssp TSCEEEEETTTTEEEEE-ECCCSSC--EEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEE--EE-ECSSCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEE-EccCCCC--EEEEEEcCCCCEEEEecC--CCcEEEEECCCCeeEE--EE-EcCCCcEEEEEE
Confidence 45788899887654332 1111111 1223333 5665555555 7899999887643332 23 222222334444
Q ss_pred e-CCcEEEE-ecCCEEEEEECCCCCE
Q 036621 309 K-KGAFFVE-SNSSQLLLYEPGTGEL 332 (376)
Q Consensus 309 ~-~~~l~~~-~~~~~~~~yd~~~~~~ 332 (376)
. ++.+++. ..++.+.+||.++++.
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 4 5665544 4467799999888754
No 241
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=20.94 E-value=3.7e+02 Score=22.50 Aligned_cols=104 Identities=10% Similarity=0.007 Sum_probs=56.6
Q ss_pred CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceEEEEE----CCeEEEEEEecCCCEEEEEEecC----
Q 036621 215 DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVTLGIY----YQSLSLLILDNVDHCFKIWVMRK---- 286 (376)
Q Consensus 215 ~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~l~~~----~G~L~~~~~~~~~~~l~iW~l~~---- 286 (376)
+|.+...+.. ...|..||+.+.+........ . ....+... +|...++... +..+.+|.+..
T Consensus 179 ~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~--~--~v~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 179 EERVVCAGYD-----NGDIKLFDLRNMALRWETNIK--N--GVCSLEFDRKDISMNKLVATSL--EGKFHVFDMRTQHPT 247 (357)
T ss_dssp CCCEEEEEET-----TSEEEEEETTTTEEEEEEECS--S--CEEEEEESCSSSSCCEEEEEES--TTEEEEEEEEEEETT
T ss_pred CCCEEEEEcc-----CCeEEEEECccCceeeecCCC--C--ceEEEEcCCCCCCCCEEEEECC--CCeEEEEeCcCCCcc
Confidence 5555554443 458999999887653331111 1 12233333 5666666655 78899999876
Q ss_pred CceeeEEEEccCCceeEeEEEeeCCc-EEEE-ecCCEEEEEECCCC
Q 036621 287 KNWIKQLTVGPFIGIFQPLLFWKKGA-FFVE-SNSSQLLLYEPGTG 330 (376)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~~~~~~-l~~~-~~~~~~~~yd~~~~ 330 (376)
...... ..........-+.+..++. +++. ..++.+.+||.++.
T Consensus 248 ~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 248 KGFASV-SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp TEEEEE-EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred cceeee-ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 222211 1101222233345555565 4443 44778999998764
No 242
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=20.41 E-value=4.1e+02 Score=22.74 Aligned_cols=140 Identities=6% Similarity=-0.062 Sum_probs=70.5
Q ss_pred eEEEEEcCC--CceEeccCCCccccCCcceeEe--CceEEEEecccCCCCceEEEEEEcCccceeeecCCCCCCCCCceE
Q 036621 184 LVAVYTLRT--NSWKNLKPIDYTMRLSSERTYF--DGAFYWLLKLENDNDSYVILSFNMADEKFQEIQGPCILESSLDVT 259 (376)
Q Consensus 184 ~~~vyss~t--~~W~~~~~~p~~~~~~~~~v~~--~G~lYwl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~ 259 (376)
..-+|.+.+ ..|+.+.. +... . -.+|.. ++.+|... . ...|+.-+-..++|+.+..+..........
T Consensus 14 ~~~~~~s~d~g~~W~~~~~-~~~~-~-~~~v~~~~~~~~~~~G-~-----~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~ 84 (327)
T 2xbg_A 14 PRGSAIPALDYNPWEAIQL-PTTA-T-ILDMSFIDRHHGWLVG-V-----NATLMETRDGGQTWEPRTLVLDHSDYRFNS 84 (327)
T ss_dssp ----CCCBCSSCCEEEEEC-SCSS-C-EEEEEESSSSCEEEEE-T-----TTEEEEESSTTSSCEECCCCCSCCCCEEEE
T ss_pred ccceeecCCCCCCceEeec-CCCC-c-EEEEEECCCCcEEEEc-C-----CCeEEEeCCCCCCCeECCCCCCCCCccEEE
Confidence 445565543 67988862 2200 0 113333 34454433 2 234555444557899886543221111233
Q ss_pred EEEECCeEEEEEEecCCCEEEEEEecC--CceeeEEEEccCCceeEeEEEeeCCcEEEEecCCEEEEEECCCCCEEEEEE
Q 036621 260 LGIYYQSLSLLILDNVDHCFKIWVMRK--KNWIKQLTVGPFIGIFQPLLFWKKGAFFVESNSSQLLLYEPGTGELRDFEL 337 (376)
Q Consensus 260 l~~~~G~L~~~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~yd~~~~~~~~v~~ 337 (376)
+...++.++++... . .|++-.| ..|+++.....++....-+.+..++.+++...++.++.-.-..++|+.+..
T Consensus 85 i~~~~~~~~~~g~~---g--~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 85 VSFQGNEGWIVGEP---P--IMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQ 159 (327)
T ss_dssp EEEETTEEEEEEET---T--EEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEEC
T ss_pred EEecCCeEEEEECC---C--eEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeec
Confidence 44456777765432 2 5677666 899987643112221122333455666665555556665555678888754
No 243
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=20.04 E-value=5.7e+02 Score=24.35 Aligned_cols=149 Identities=11% Similarity=0.006 Sum_probs=71.7
Q ss_pred ceEEEEEcCCCceEeccCCC-c-cccCCcceeEeCce-EEEEecccCCCCceEEEEEEcCcc-ceeeecCCCCCC-CCCc
Q 036621 183 SLVAVYTLRTNSWKNLKPID-Y-TMRLSSERTYFDGA-FYWLLKLENDNDSYVILSFNMADE-KFQEIQGPCILE-SSLD 257 (376)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~p-~-~~~~~~~~v~~~G~-lYwl~~~~~~~~~~~il~fD~~~~-~~~~i~~P~~~~-~~~~ 257 (376)
..+.+++..++.-+.+.... . ..-. .....-||. ++.....+. .....|..+|+.+. ....+.-..... ....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLT-NLSWSPDENILYVAEVNRA-QNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEE-EEEECTTSSEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEe-eEEEECCCCEEEEEEeCCC-CCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 57888888887655443111 1 0000 011122565 444332211 13458899999887 555542111100 0000
Q ss_pred eEEEE-E--CCeEEEEEEecCCCEEEEEEecCCceeeEEEEccCCc-eeEeEEEeeCCc-EEEEecC-----CEEEEEEC
Q 036621 258 VTLGI-Y--YQSLSLLILDNVDHCFKIWVMRKKNWIKQLTVGPFIG-IFQPLLFWKKGA-FFVESNS-----SQLLLYEP 327 (376)
Q Consensus 258 ~~l~~-~--~G~L~~~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~-~~~~~~~~~~~~-l~~~~~~-----~~~~~yd~ 327 (376)
..+.- - +|++.++... +....||.++.. -..+..+..... ....+++..+++ |++...+ ..++.+|.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~--~g~~~l~~~~~~-~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRR--DGWNHLYLYDTT-GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp SCCEECTTCSSEEEEEECT--TSSCEEEEEETT-SCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred CCceeecCCCCEEEEEEcc--CCccEEEEEECC-CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 11122 2 6775443333 456889988731 012233311111 123356666665 5555432 27888999
Q ss_pred CCCCEEEEE
Q 036621 328 GTGELRDFE 336 (376)
Q Consensus 328 ~~~~~~~v~ 336 (376)
++++.+.+.
T Consensus 390 ~~~~~~~l~ 398 (706)
T 2z3z_A 390 KGGKTKDLT 398 (706)
T ss_dssp TCCCCEESC
T ss_pred CCCCceecc
Confidence 887766553
Done!