BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036625
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SNX1|DBP9_BOTFB ATP-dependent RNA helicase dbp9 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp9 PE=3 SV=2
Length = 607
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ + +C+L++ +P SR + V F Y
Sbjct: 266 LKLIKGKCIIFVGDIDRCYRLKLFLEQFGTRSCILNSQLPVN----SRIHVVEEFNKNVY 321
Query: 60 DISVKLDRNAFLVD 73
DI + D + L D
Sbjct: 322 DIIIASDEHEVLGD 335
>sp|A7EM78|DBP9_SCLS1 ATP-dependent RNA helicase dbp9 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp9 PE=3 SV=1
Length = 607
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ + +C+L++ +P SR + V F Y
Sbjct: 266 LKLIKGKCIIFVGDIDRCYRLKLFLEQFGTRSCILNSQLPVN----SRIHVVEEFNKNVY 321
Query: 60 DISVKLDRNAFLVD 73
DI + D + L D
Sbjct: 322 DIIIASDEHEVLGD 335
>sp|A6R2L6|DBP9_AJECN ATP-dependent RNA helicase DBP9 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP9 PE=3 SV=1
Length = 625
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 268 LQLVKGKCIIFVGDVDRCYRLKLFLEQFGIRSCVLNSELPVN----SRIHVVQEFNKGVY 323
Query: 60 DISVKLDRNAFLVDIVKEKIGRVLKLDSIKHGDAWKGYDMLIFNTWHWWLHKGSKQP 116
DI + +D L ++ K + K D + G N + QP
Sbjct: 324 DIIIAVDDQEVLGELRKNSKKQPRKSDQCSRDSEYDGAQTSRNNDQYSSEDDAETQP 380
>sp|Q5AZA6|DBP9_EMENI ATP-dependent RNA helicase dbp9 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp9
PE=3 SV=1
Length = 610
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 271 LQLIKGKVIIFVGDIDRSYRLKLFLEQFGIKSCILNSELPVN----SRIHVVEEFNKGVY 326
Query: 60 DISVKLDRNAFL 71
DI + D L
Sbjct: 327 DIIIAADEQEVL 338
>sp|Q1DWF4|DBP9_COCIM ATP-dependent RNA helicase DBP9 OS=Coccidioides immitis (strain RS)
GN=DBP9 PE=3 SV=2
Length = 612
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 266 LQLVKGKCIIFVGDIDRSYRLKLFLEQFGIKSCVLNSELPVN----SRIHVVQEFNKGVY 321
Query: 60 DISVKLDRNAFLVDIVKE 77
DI + D + +I K+
Sbjct: 322 DIIIAADDQEVIGEIPKK 339
>sp|A2QCW6|DBP9_ASPNC ATP-dependent RNA helicase dbp9 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp9 PE=3 SV=1
Length = 616
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 270 LQLIKGKVIIFVGDIDRCYRLKLFLEQFGVKSCVLNSELPVN----SRIHVVQEFNKGVY 325
Query: 60 DISVKLDRNAFL 71
DI + D L
Sbjct: 326 DIIIAADDQEVL 337
>sp|A1C7F7|DBP9_ASPCL ATP-dependent RNA helicase dbp9 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp9 PE=3 SV=1
Length = 621
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 270 LQLIKGKVIIFVGDIDRCYRVKLFLEQFGIKSCVLNSELPIN----SRIHVVQEFNKGVY 325
Query: 60 DISVKLDRNAFL 71
DI + D +
Sbjct: 326 DIIIAADEQEVM 337
>sp|Q4X0C2|DBP9_ASPFU ATP-dependent RNA helicase dbp9 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp9
PE=3 SV=1
Length = 649
Score = 31.2 bits (69), Expect = 4.8, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 300 LQLIKGKVIIFVGDIDRCYRLKLFLEQFGIKSCVLNSELPIN----SRIHVVQEFNKGVY 355
Query: 60 DISVKLDRNAFL 71
DI + D +
Sbjct: 356 DIIIAADEQEVM 367
>sp|Q0CY48|DBP9_ASPTN ATP-dependent RNA helicase dbp9 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp9 PE=3 SV=2
Length = 619
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 270 LQLIKGKVIIFVGDVDRCYRVKLFLEQFGIKSCVLNSELPVN----SRLHVVQEFNKGVY 325
Query: 60 DISVKLDRNAFL 71
DI + D +
Sbjct: 326 DIIIAADEQEVM 337
>sp|A1DHV3|DBP9_NEOFI ATP-dependent RNA helicase dbp9 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp9
PE=3 SV=1
Length = 619
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 7 LRRYKGKKILFVGD-------SLSLNQWQSLACMLHASVPQTNFTISRTNGVSTFTIPEY 59
L+ KGK I+FVGD L L Q+ +C+L++ +P SR + V F Y
Sbjct: 270 LQLIKGKVIIFVGDIDRCYRLKLFLEQFGIKSCVLNSELPIN----SRIHVVQEFNKGVY 325
Query: 60 DISVKLDRNAFL 71
DI + D +
Sbjct: 326 DIIIAADEQEVM 337
>sp|Q87PM1|Y1481_VIBPA Uncharacterized protein VP1481 OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=VP1481 PE=3 SV=1
Length = 288
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 17 FVGDSLSLNQWQSLACMLHASVPQT-NFTISRTNGVSTFTIPEYDISVKLDRNAFLVDIV 75
++G +L NQW CM A + + GV+ I ++ +D+V
Sbjct: 131 YLGSTLQPNQWHKKWCMFFAEQRIGWQLQLLKEKGVTLVDIDDF------------IDVV 178
Query: 76 KEKIGRVLKLDSIKHGDAWKG 96
K+ + S+ HGD W G
Sbjct: 179 KQLLANHTPEPSLLHGDLWNG 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,090,623
Number of Sequences: 539616
Number of extensions: 3681131
Number of successful extensions: 8087
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8085
Number of HSP's gapped (non-prelim): 14
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)