Query 036625
Match_columns 213
No_of_seqs 115 out of 676
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 05:52:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hp4_A GDSL-esterase; psychrot 84.9 0.42 1.4E-05 36.5 2.2 14 12-25 2-15 (185)
2 4hf7_A Putative acylhydrolase; 79.9 0.46 1.6E-05 37.7 0.7 15 11-25 25-39 (209)
3 3rjt_A Lipolytic protein G-D-S 75.5 0.81 2.8E-05 35.3 0.9 26 133-162 112-137 (216)
4 3mil_A Isoamyl acetate-hydroly 73.5 0.93 3.2E-05 35.8 0.8 54 95-166 71-124 (240)
5 1ivn_A Thioesterase I; hydrola 71.1 0.97 3.3E-05 34.8 0.4 14 12-25 1-14 (190)
6 1yzf_A Lipase/acylhydrolase; s 68.5 1.1 3.8E-05 33.9 0.2 51 95-167 66-116 (195)
7 3dc7_A Putative uncharacterize 66.7 2.8 9.5E-05 33.2 2.2 18 8-25 17-34 (232)
8 4h08_A Putative hydrolase; GDS 64.9 2.9 9.9E-05 32.3 2.0 51 96-168 74-124 (200)
9 2q0q_A ARYL esterase; SGNH hyd 64.4 1.5 5.2E-05 34.0 0.2 53 97-165 84-141 (216)
10 2hsj_A Putative platelet activ 61.7 2.5 8.5E-05 32.8 1.0 53 96-168 85-137 (214)
11 1fxw_F Alpha2, platelet-activa 60.9 3.8 0.00013 32.6 2.0 22 5-26 30-53 (229)
12 3dci_A Arylesterase; SGNH_hydr 60.9 1.9 6.5E-05 34.4 0.2 34 133-166 122-158 (232)
13 3q98_A Transcarbamylase; rossm 59.2 5.5 0.00019 36.0 3.0 28 10-37 189-221 (399)
14 3bzw_A Putative lipase; protei 58.9 3.6 0.00012 33.8 1.6 17 9-25 23-39 (274)
15 1vjg_A Putative lipase from th 58.8 1.9 6.6E-05 33.8 -0.1 52 96-166 88-140 (218)
16 3tpf_A Otcase, ornithine carba 58.2 5.2 0.00018 34.8 2.6 25 10-36 143-168 (307)
17 4f2g_A Otcase 1, ornithine car 55.9 5.2 0.00018 34.8 2.2 25 10-36 152-176 (309)
18 3grf_A Ornithine carbamoyltran 55.8 5.7 0.0002 34.9 2.4 27 9-36 158-184 (328)
19 3r7f_A Aspartate carbamoyltran 55.2 6.8 0.00023 34.0 2.8 27 10-36 145-171 (304)
20 3p94_A GDSL-like lipase; serin 54.8 3.2 0.00011 31.7 0.6 31 133-167 96-126 (204)
21 1es9_A PAF-AH, platelet-activa 54.6 3.8 0.00013 32.5 1.0 16 11-26 37-52 (232)
22 2yfk_A Aspartate/ornithine car 53.2 7.9 0.00027 35.2 3.0 28 10-37 186-218 (418)
23 4amu_A Ornithine carbamoyltran 52.8 6.6 0.00023 35.0 2.3 26 10-36 178-203 (365)
24 2waa_A Acetyl esterase, xylan 51.4 4.7 0.00016 34.8 1.1 48 96-162 225-272 (347)
25 2vpt_A Lipolytic enzyme; ester 49.5 4.4 0.00015 31.8 0.6 14 12-25 5-18 (215)
26 3sds_A Ornithine carbamoyltran 47.9 8.3 0.00028 34.2 2.2 25 10-36 186-210 (353)
27 2w9x_A AXE2A, CJCE2B, putative 47.8 5.4 0.00018 34.7 0.9 28 133-162 266-293 (366)
28 3csu_A Protein (aspartate carb 46.9 9.3 0.00032 33.2 2.3 29 9-37 151-179 (310)
29 1pg5_A Aspartate carbamoyltran 46.2 12 0.00041 32.3 2.9 29 9-37 146-174 (299)
30 2wao_A Endoglucanase E; plant 44.8 5.2 0.00018 34.2 0.4 15 11-25 121-135 (341)
31 4ekn_B Aspartate carbamoyltran 44.2 11 0.00037 32.7 2.3 29 9-37 148-176 (306)
32 4ep1_A Otcase, ornithine carba 44.2 10 0.00035 33.5 2.2 25 10-36 177-201 (340)
33 3gd5_A Otcase, ornithine carba 43.5 11 0.00037 33.1 2.2 25 10-36 155-179 (323)
34 4a8t_A Putrescine carbamoyltra 43.2 11 0.00038 33.2 2.2 26 9-36 172-197 (339)
35 2o14_A Hypothetical protein YX 42.9 9 0.00031 33.6 1.6 15 11-25 161-175 (375)
36 3skv_A SSFX3; jelly roll, GDSL 41.8 9.8 0.00033 33.8 1.7 14 12-25 185-198 (385)
37 1oth_A Protein (ornithine tran 41.7 12 0.00039 32.8 2.1 27 9-37 152-178 (321)
38 4a8p_A Putrescine carbamoyltra 41.2 12 0.00042 33.1 2.2 26 9-36 150-175 (355)
39 1vcc_A DNA topoisomerase I; DN 40.5 6.9 0.00023 27.1 0.3 15 13-27 55-70 (77)
40 1k7c_A Rhamnogalacturonan acet 38.4 10 0.00035 30.3 1.2 13 14-26 2-14 (233)
41 1vlv_A Otcase, ornithine carba 36.0 17 0.00058 31.8 2.3 28 9-37 164-191 (325)
42 1ml4_A Aspartate transcarbamoy 35.4 17 0.00057 31.6 2.1 28 10-37 153-180 (308)
43 3t6g_B Breast cancer anti-estr 33.1 1.7 5.8E-05 36.4 -4.4 17 9-25 143-159 (229)
44 4h31_A Otcase, ornithine carba 31.4 21 0.00073 31.5 2.1 27 9-36 178-204 (358)
45 2qru_A Uncharacterized protein 29.5 34 0.0011 27.5 2.9 31 4-34 82-117 (274)
46 1oeg_A Apolipoprotein E; siali 29.2 21 0.00071 19.8 1.0 17 23-39 6-22 (26)
47 4fe3_A Cytosolic 5'-nucleotida 28.8 22 0.00076 29.3 1.7 14 11-24 229-242 (297)
48 2ef0_A Ornithine carbamoyltran 28.7 26 0.00089 30.2 2.2 27 9-37 151-177 (301)
49 3d6n_B Aspartate carbamoyltran 28.5 28 0.00095 29.9 2.3 29 9-37 143-171 (291)
50 2w37_A Ornithine carbamoyltran 28.4 28 0.00095 30.9 2.3 28 9-37 173-200 (359)
51 1dxh_A Ornithine carbamoyltran 28.3 28 0.00095 30.5 2.3 28 9-37 152-179 (335)
52 1pvv_A Otcase, ornithine carba 27.3 28 0.00097 30.2 2.2 27 9-37 152-178 (315)
53 1duv_G Octase-1, ornithine tra 26.0 32 0.0011 30.1 2.3 28 9-37 152-179 (333)
54 2i6u_A Otcase, ornithine carba 25.6 33 0.0011 29.7 2.2 28 9-37 145-172 (307)
55 2r8e_A 3-deoxy-D-manno-octulos 22.7 37 0.0013 25.9 1.9 16 13-30 118-133 (188)
56 3mmz_A Putative HAD family hyd 20.4 43 0.0015 25.3 1.8 13 12-24 102-114 (176)
57 3e8m_A Acylneuraminate cytidyl 20.3 50 0.0017 24.1 2.1 17 12-30 95-111 (164)
58 3enc_A Protein PCC1; dimerizat 20.3 60 0.002 22.9 2.3 17 133-149 64-80 (87)
No 1
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=84.90 E-value=0.42 Score=36.47 Aligned_cols=14 Identities=43% Similarity=0.676 Sum_probs=12.8
Q ss_pred CCcEEEEecccchh
Q 036625 12 GKKILFVGDSLSLN 25 (213)
Q Consensus 12 gK~l~FVGDSl~RN 25 (213)
||+|+|+|||++..
T Consensus 2 ~~~i~~~GDSit~G 15 (185)
T 3hp4_A 2 DNTILILGDXLSAA 15 (185)
T ss_dssp CEEEEEEECTTTTT
T ss_pred CCeEEEECCccccc
Confidence 79999999999974
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=79.91 E-value=0.46 Score=37.70 Aligned_cols=15 Identities=27% Similarity=0.736 Sum_probs=13.0
Q ss_pred cCCcEEEEecccchh
Q 036625 11 KGKKILFVGDSLSLN 25 (213)
Q Consensus 11 RgK~l~FVGDSl~RN 25 (213)
.+++|+|+||||++.
T Consensus 25 ~~~~Iv~~GDSit~g 39 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG 39 (209)
T ss_dssp GGCCEEEEESHHHHH
T ss_pred CCCeEEEECcHHHhC
Confidence 468999999999974
No 3
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=75.47 E-value=0.81 Score=35.31 Aligned_cols=26 Identities=8% Similarity=0.124 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 036625 133 LVVFNKGLTTWGKWVDSSVDPTTTKVFFQG 162 (213)
Q Consensus 133 ~~ay~~al~t~~~~i~~~~~~~~~~vffRt 162 (213)
.+.|+..++.+++.+.+. ..++++-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 467888888888887654 45677665
No 4
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=73.52 E-value=0.93 Score=35.75 Aligned_cols=54 Identities=11% Similarity=-0.004 Sum_probs=32.0
Q ss_pred CcccEEEEcccccccccCCCCCcceeecCceecccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEeecCC
Q 036625 95 KGYDMLIFNTWHWWLHKGSKQPWDYIQEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVDPTTTKVFFQGISPT 166 (213)
Q Consensus 95 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~SP~ 166 (213)
...|++|+..|.= . ....+ .... ..+.|+..++.+++-+.+. ..+|++-+..|.
T Consensus 71 ~~pd~vvi~~G~N----D------~~~~~---~~~~-~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~ 124 (240)
T 3mil_A 71 SNIVMATIFLGAN----D------ACSAG---PQSV-PLPEFIDNIRQMVSLMKSY----HIRPIIIGPGLV 124 (240)
T ss_dssp CCEEEEEEECCTT----T------TSSSS---TTCC-CHHHHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred CCCCEEEEEeecC----c------CCccC---CCCC-CHHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Confidence 3589999998861 1 11000 0111 2356788888888777653 347888776664
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=71.13 E-value=0.97 Score=34.75 Aligned_cols=14 Identities=43% Similarity=0.705 Sum_probs=12.3
Q ss_pred CCcEEEEecccchh
Q 036625 12 GKKILFVGDSLSLN 25 (213)
Q Consensus 12 gK~l~FVGDSl~RN 25 (213)
.|+|+|+|||++..
T Consensus 1 ~~~i~~~GDSit~g 14 (190)
T 1ivn_A 1 ADTLLILGDSLSAG 14 (190)
T ss_dssp CEEEEEEECHHHHC
T ss_pred CCcEEEEecCcccC
Confidence 47999999999875
No 6
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=68.47 E-value=1.1 Score=33.91 Aligned_cols=51 Identities=12% Similarity=0.028 Sum_probs=30.4
Q ss_pred CcccEEEEcccccccccCCCCCcceeecCceecccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 036625 95 KGYDMLIFNTWHWWLHKGSKQPWDYIQEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVDPTTTKVFFQGISPTH 167 (213)
Q Consensus 95 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~SP~H 167 (213)
...|++|+..|.- . +...+ .. ..+.|+..++..++.+. ..++++-+..|..
T Consensus 66 ~~pd~vvi~~G~N----D------~~~~~-----~~-~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~~ 116 (195)
T 1yzf_A 66 EKPDEVVIFFGAN----D------ASLDR-----NI-TVATFRENLETMIHEIG------SEKVILITPPYAD 116 (195)
T ss_dssp GCCSEEEEECCTT----T------TCTTS-----CC-CHHHHHHHHHHHHHHHC------GGGEEEECCCCCC
T ss_pred cCCCEEEEEeecc----c------cCccC-----CC-CHHHHHHHHHHHHHHhc------CCEEEEEcCCCCc
Confidence 3579999998861 1 11001 11 23567777777777663 4567777777753
No 7
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=66.72 E-value=2.8 Score=33.18 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=14.5
Q ss_pred HHHcCCcEEEEecccchh
Q 036625 8 RRYKGKKILFVGDSLSLN 25 (213)
Q Consensus 8 e~lRgK~l~FVGDSl~RN 25 (213)
..+..++|+|+||||+..
T Consensus 17 ~~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 17 GHVSFKRPAWLGDSITAN 34 (232)
T ss_dssp -CBCCSSEEEEESTTTST
T ss_pred cCCCcceEEEEccccccc
Confidence 345678999999999985
No 8
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=64.92 E-value=2.9 Score=32.32 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=33.5
Q ss_pred cccEEEEcccccccccCCCCCcceeecCceecccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCc
Q 036625 96 GYDMLIFNTWHWWLHKGSKQPWDYIQEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVDPTTTKVFFQGISPTHY 168 (213)
Q Consensus 96 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~SP~Hf 168 (213)
..|+|||+.|..= . .. ..+.|+..|+..++.+.+. ..+.++++-|..|...
T Consensus 74 ~pd~Vvi~~G~ND---~----------------~~-~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHG---F----------------DY-TEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSC---T----------------TS-CHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCC---C----------------CC-CHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc
Confidence 4799999988631 0 01 2356788888888877543 2356788888877543
No 9
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=64.36 E-value=1.5 Score=34.05 Aligned_cols=53 Identities=17% Similarity=0.048 Sum_probs=30.2
Q ss_pred ccEEEEcccccccccCCCCCcceeecCceecccCCHHHHHHHHHHHHHHHHHhcCC-----CCCceEEEEeecC
Q 036625 97 YDMLIFNTWHWWLHKGSKQPWDYIQEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVD-----PTTTKVFFQGISP 165 (213)
Q Consensus 97 ~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~-----~~~~~vffRt~SP 165 (213)
.|+||+..|.- +.... ... ..+.|+..++.+++.+.+.-. ..+.+|++-+..|
T Consensus 84 ~d~vvi~~G~N----------D~~~~-----~~~-~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 84 LDLVIIMLGTN----------DTKAY-----FRR-TPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp CSEEEEECCTG----------GGSGG-----GCC-CHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred CCEEEEEecCc----------ccchh-----cCC-CHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 59999998862 11100 011 235788888888888765420 0235677766544
No 10
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=61.66 E-value=2.5 Score=32.78 Aligned_cols=53 Identities=13% Similarity=0.017 Sum_probs=31.8
Q ss_pred cccEEEEcccccccccCCCCCcceeecCceecccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCc
Q 036625 96 GYDMLIFNTWHWWLHKGSKQPWDYIQEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVDPTTTKVFFQGISPTHY 168 (213)
Q Consensus 96 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~SP~Hf 168 (213)
..|++|+..|.- +... + .+ .+.|+..++..++.+.+.. ...+|++-+..|...
T Consensus 85 ~pd~vvi~~G~N----------D~~~-~------~~-~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~~ 137 (214)
T 2hsj_A 85 AVDKIFLLIGTN----------DIGK-D------VP-VNEALNNLEAIIQSVARDY--PLTEIKLLSILPVNE 137 (214)
T ss_dssp CCCEEEEECCHH----------HHHT-T------CC-HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCCC
T ss_pred CCCEEEEEEecC----------cCCc-C------CC-HHHHHHHHHHHHHHHHHhC--CCCeEEEEecCCCCc
Confidence 469999988751 1111 1 11 3457777777777776542 235688888777553
No 11
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=60.93 E-value=3.8 Score=32.57 Aligned_cols=22 Identities=36% Similarity=0.531 Sum_probs=16.4
Q ss_pred HHHHHH--cCCcEEEEecccchhh
Q 036625 5 DFLRRY--KGKKILFVGDSLSLNQ 26 (213)
Q Consensus 5 ~fLe~l--RgK~l~FVGDSl~RNq 26 (213)
+|++.. ...+|+|+|||++..-
T Consensus 30 ~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 30 RFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHcccCCCCEEEEecchhcCC
Confidence 444443 5789999999999764
No 12
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=60.86 E-value=1.9 Score=34.44 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCC---CCceEEEEeecCC
Q 036625 133 LVVFNKGLTTWGKWVDSSVDP---TTTKVFFQGISPT 166 (213)
Q Consensus 133 ~~ay~~al~t~~~~i~~~~~~---~~~~vffRt~SP~ 166 (213)
.+.|+..|+.+++.+.+.... ....|++-+-.|.
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 457888888888887654210 3456777765443
No 13
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=59.25 E-value=5.5 Score=35.96 Aligned_cols=28 Identities=25% Similarity=0.195 Sum_probs=22.2
Q ss_pred HcCCcEEEEec---ccch--hhHHHHHHhhccc
Q 036625 10 YKGKKILFVGD---SLSL--NQWQSLACMLHAS 37 (213)
Q Consensus 10 lRgK~l~FVGD---Sl~R--Nq~eSLlClL~~~ 37 (213)
|+|++|++||| |.+| |...||+.++..-
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~l 221 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRF 221 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHHc
Confidence 67899999998 4455 7789999888643
No 14
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=58.86 E-value=3.6 Score=33.78 Aligned_cols=17 Identities=35% Similarity=0.735 Sum_probs=14.3
Q ss_pred HHcCCcEEEEecccchh
Q 036625 9 RYKGKKILFVGDSLSLN 25 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RN 25 (213)
...+++|+|+||||+..
T Consensus 23 ~~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 23 PWQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTTCEEEEEESTTTCT
T ss_pred cCCCCEEEEEecCcccC
Confidence 35689999999999864
No 15
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=58.84 E-value=1.9 Score=33.78 Aligned_cols=52 Identities=12% Similarity=0.036 Sum_probs=31.5
Q ss_pred cccEEEEcccccccccCCCCCccee-ecCceecccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEeecCC
Q 036625 96 GYDMLIFNTWHWWLHKGSKQPWDYI-QEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVDPTTTKVFFQGISPT 166 (213)
Q Consensus 96 ~~DvlV~ntGhWw~~~~~~~~~~~~-~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt~SP~ 166 (213)
..|+||+..|.= +.. ..+. ... ..+.|+..++..++.+.+. .+|++-+..|.
T Consensus 88 ~pd~vvi~~G~N----------D~~~~~~~---~~~-~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 88 YNSLVVFSFGLN----------DTTLENGK---PRV-SIAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp SEEEEEEECCHH----------HHCEETTE---ESS-CHHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCEEEEEecCC----------cchhhccc---ccC-CHHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 679999998861 111 0000 011 2356777788887777654 46888777665
No 16
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=58.15 E-value=5.2 Score=34.78 Aligned_cols=25 Identities=28% Similarity=0.244 Sum_probs=21.3
Q ss_pred Hc-CCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YK-GKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lR-gK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
+. |++|+|||| .-|...||+.++..
T Consensus 143 l~~gl~va~vGD--~~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD--SNNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC--SSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC--CCccHHHHHHHHHH
Confidence 67 999999999 35799999988874
No 17
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=55.87 E-value=5.2 Score=34.82 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=21.4
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
+.|++|+||||- -|...||+.++..
T Consensus 152 l~glkva~vGD~--~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 152 IRGKTVAWVGDA--NNMLYTWIQAARI 176 (309)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--cchHHHHHHHHHH
Confidence 689999999993 5699999988874
No 18
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.83 E-value=5.7 Score=34.86 Aligned_cols=27 Identities=30% Similarity=0.357 Sum_probs=23.3
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
.+.|++|+||||-.+ |...||+.++..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 578999999999766 699999988864
No 19
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=55.21 E-value=6.8 Score=34.01 Aligned_cols=27 Identities=26% Similarity=0.224 Sum_probs=23.1
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
+.|++|+||||-.+-|...||+.++..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 789999999997666799999988864
No 20
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=54.79 E-value=3.2 Score=31.71 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCC
Q 036625 133 LVVFNKGLTTWGKWVDSSVDPTTTKVFFQGISPTH 167 (213)
Q Consensus 133 ~~ay~~al~t~~~~i~~~~~~~~~~vffRt~SP~H 167 (213)
.+.|+..++.+++.+.+ ....|++-|..|..
T Consensus 96 ~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~~ 126 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA----NHIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHh----CCCeEEEEeCCCCC
Confidence 34677777777776654 24467777777653
No 21
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=54.59 E-value=3.8 Score=32.46 Aligned_cols=16 Identities=38% Similarity=0.603 Sum_probs=13.9
Q ss_pred cCCcEEEEecccchhh
Q 036625 11 KGKKILFVGDSLSLNQ 26 (213)
Q Consensus 11 RgK~l~FVGDSl~RNq 26 (213)
...+|+|+|||++..-
T Consensus 37 ~~~~i~~~GDSit~g~ 52 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLM 52 (232)
T ss_dssp CCCSEEEEESHHHHTH
T ss_pred CCCCEEEEechHhhcc
Confidence 5688999999999873
No 22
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=53.23 E-value=7.9 Score=35.17 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=23.1
Q ss_pred HcCCcEEEEec---ccch--hhHHHHHHhhccc
Q 036625 10 YKGKKILFVGD---SLSL--NQWQSLACMLHAS 37 (213)
Q Consensus 10 lRgK~l~FVGD---Sl~R--Nq~eSLlClL~~~ 37 (213)
++|++|++||| |.+| |...||+-+|..-
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~l 218 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRL 218 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGG
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHc
Confidence 67999999998 4577 8999999888744
No 23
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=52.78 E-value=6.6 Score=35.04 Aligned_cols=26 Identities=35% Similarity=0.286 Sum_probs=22.3
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
++|++|+||||-.+ |...||+.++..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 68999999999766 689999988863
No 24
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=51.35 E-value=4.7 Score=34.79 Aligned_cols=48 Identities=10% Similarity=0.164 Sum_probs=27.8
Q ss_pred cccEEEEcccccccccCCCCCcceeecCceecccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 036625 96 GYDMLIFNTWHWWLHKGSKQPWDYIQEGNNIQKYMDRLVVFNKGLTTWGKWVDSSVDPTTTKVFFQG 162 (213)
Q Consensus 96 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vffRt 162 (213)
..|+||++-|- . +... + ....+.|+.+++.+++-|.+.. .+..|++-+
T Consensus 225 ~Pd~VvI~lG~---N-------D~~~-~------~~~~~~~~~~l~~li~~ir~~~--p~~~I~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGT---N-------DFSP-G------IPDRATYINTYTRFVRTLLDNH--PQATIVLTE 272 (347)
T ss_dssp CCSEEEECCCH---H-------HHSS-S------CCCHHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred CCCEEEEEccc---c-------CCCC-C------CCcHHHHHHHHHHHHHHHHHHC--CCCEEEEEe
Confidence 46999999875 1 1100 1 1223567777777777775542 245666655
No 25
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=49.45 E-value=4.4 Score=31.78 Aligned_cols=14 Identities=43% Similarity=0.418 Sum_probs=11.8
Q ss_pred CCcEEEEecccchh
Q 036625 12 GKKILFVGDSLSLN 25 (213)
Q Consensus 12 gK~l~FVGDSl~RN 25 (213)
..+|+|+||||+..
T Consensus 5 ~~~i~~~GDSit~G 18 (215)
T 2vpt_A 5 TIKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEEESHHHHT
T ss_pred ceEEEecccccccC
Confidence 45899999999875
No 26
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=47.93 E-value=8.3 Score=34.21 Aligned_cols=25 Identities=36% Similarity=0.405 Sum_probs=21.2
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
+.|++|+||||- .|...||+.+|..
T Consensus 186 l~glkva~vGD~--~nva~Sl~~~l~~ 210 (353)
T 3sds_A 186 LEGLKIAWVGDA--NNVLFDLAIAATK 210 (353)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC--chHHHHHHHHHHH
Confidence 389999999996 4799999988864
No 27
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=47.78 E-value=5.4 Score=34.69 Aligned_cols=28 Identities=7% Similarity=0.088 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 036625 133 LVVFNKGLTTWGKWVDSSVDPTTTKVFFQG 162 (213)
Q Consensus 133 ~~ay~~al~t~~~~i~~~~~~~~~~vffRt 162 (213)
.+.|+..++.+++-+.+.- .+..|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNN--ARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 4578888888888876542 245666666
No 28
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=46.93 E-value=9.3 Score=33.24 Aligned_cols=29 Identities=24% Similarity=0.168 Sum_probs=23.8
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||-..-|...||+-++..-
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 179 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKF 179 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 36899999999966557899999888744
No 29
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=46.20 E-value=12 Score=32.32 Aligned_cols=29 Identities=21% Similarity=0.163 Sum_probs=23.9
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||-..-|...||+-++..-
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 174 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRF 174 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 36899999999977667899999887644
No 30
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=44.78 E-value=5.2 Score=34.25 Aligned_cols=15 Identities=40% Similarity=0.674 Sum_probs=12.6
Q ss_pred cCCcEEEEecccchh
Q 036625 11 KGKKILFVGDSLSLN 25 (213)
Q Consensus 11 RgK~l~FVGDSl~RN 25 (213)
..++|+|+||||+-.
T Consensus 121 ~~~~I~~iGDSiT~G 135 (341)
T 2wao_A 121 LERKIEFIGDSITCA 135 (341)
T ss_dssp CSEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 467999999999864
No 31
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=44.19 E-value=11 Score=32.69 Aligned_cols=29 Identities=38% Similarity=0.346 Sum_probs=23.5
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|+||||-..-|...||+.++..-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~ 176 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLF 176 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhc
Confidence 36899999999966557899999888643
No 32
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=44.18 E-value=10 Score=33.45 Aligned_cols=25 Identities=36% Similarity=0.491 Sum_probs=21.4
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
++|++|+||||- -|...||+.++..
T Consensus 177 l~glkva~vGD~--~nva~Sl~~~~~~ 201 (340)
T 4ep1_A 177 FKGIKLAYVGDG--NNVCHSLLLASAK 201 (340)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 789999999995 5689999988864
No 33
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=43.47 E-value=11 Score=33.05 Aligned_cols=25 Identities=32% Similarity=0.312 Sum_probs=21.5
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
++|++|+||||- -|...||+.++..
T Consensus 155 l~glkva~vGD~--~rva~Sl~~~~~~ 179 (323)
T 3gd5_A 155 LAGLKLAYVGDG--NNVAHSLLLGCAK 179 (323)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--CcHHHHHHHHHHH
Confidence 689999999997 6789999988753
No 34
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=43.19 E-value=11 Score=33.21 Aligned_cols=26 Identities=27% Similarity=0.413 Sum_probs=21.8
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
.+.|++|+||||- -|...||+.++..
T Consensus 172 ~l~glkva~vGD~--~rva~Sl~~~~~~ 197 (339)
T 4a8t_A 172 KLEDCKVVFVGDA--TQVCFSLGLITTK 197 (339)
T ss_dssp CGGGCEEEEESSC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 3678999999997 6789999988864
No 35
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=42.94 E-value=9 Score=33.58 Aligned_cols=15 Identities=33% Similarity=0.392 Sum_probs=13.3
Q ss_pred cCCcEEEEecccchh
Q 036625 11 KGKKILFVGDSLSLN 25 (213)
Q Consensus 11 RgK~l~FVGDSl~RN 25 (213)
.+++|+|+||||+..
T Consensus 161 ~~~~Iv~lGDSiT~G 175 (375)
T 2o14_A 161 TNRTIYVGGDSTVCN 175 (375)
T ss_dssp CCCEEEEEECTTTSC
T ss_pred CCcEEEEecCccccC
Confidence 467999999999987
No 36
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=41.78 E-value=9.8 Score=33.79 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=12.0
Q ss_pred CCcEEEEecccchh
Q 036625 12 GKKILFVGDSLSLN 25 (213)
Q Consensus 12 gK~l~FVGDSl~RN 25 (213)
.|+|+|+||||+..
T Consensus 185 ~~~Iv~~GDSiT~G 198 (385)
T 3skv_A 185 KPHWIHYGDSICHG 198 (385)
T ss_dssp CCEEEEEECSSCTT
T ss_pred CceEEEEeccccCC
Confidence 68999999999743
No 37
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=41.66 E-value=12 Score=32.79 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=21.5
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||- .|...||+-++..-
T Consensus 152 ~l~gl~va~vGD~--~~va~Sl~~~~~~~ 178 (321)
T 1oth_A 152 SLKGLTLSWIGDG--NNILHSIMMSAAKF 178 (321)
T ss_dssp CCTTCEEEEESCS--SHHHHHHHTTTGGG
T ss_pred CcCCcEEEEECCc--hhhHHHHHHHHHHc
Confidence 3679999999993 47999998777643
No 38
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=41.17 E-value=12 Score=33.13 Aligned_cols=26 Identities=27% Similarity=0.413 Sum_probs=21.9
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
.+.|++|+||||- -|...||+.++..
T Consensus 150 ~l~glkva~vGD~--~rva~Sl~~~~~~ 175 (355)
T 4a8p_A 150 KLEDCKVVFVGDA--TQVCFSLGLITTK 175 (355)
T ss_dssp CGGGCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 3678999999996 6789999988864
No 39
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=40.53 E-value=6.9 Score=27.05 Aligned_cols=15 Identities=40% Similarity=0.789 Sum_probs=12.4
Q ss_pred CcEEEEe-cccchhhH
Q 036625 13 KKILFVG-DSLSLNQW 27 (213)
Q Consensus 13 K~l~FVG-DSl~RNq~ 27 (213)
.+|.||| ||=+|-|+
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 4699999 89988775
No 40
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=38.37 E-value=10 Score=30.35 Aligned_cols=13 Identities=23% Similarity=0.422 Sum_probs=11.3
Q ss_pred cEEEEecccchhh
Q 036625 14 KILFVGDSLSLNQ 26 (213)
Q Consensus 14 ~l~FVGDSl~RNq 26 (213)
+|.|+|||++.+.
T Consensus 2 ~I~~~GDS~t~g~ 14 (233)
T 1k7c_A 2 TVYLAGDSTMAKN 14 (233)
T ss_dssp EEEEECCTTTSTT
T ss_pred EEEEEecCCCcCC
Confidence 6999999999863
No 41
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=35.97 E-value=17 Score=31.76 Aligned_cols=28 Identities=36% Similarity=0.413 Sum_probs=22.1
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++||| ..-|...||+-+|..-
T Consensus 164 ~l~gl~va~vGD-~~~rva~Sl~~~~~~~ 191 (325)
T 1vlv_A 164 RLKGVKVVFMGD-TRNNVATSLMIACAKM 191 (325)
T ss_dssp CSTTCEEEEESC-TTSHHHHHHHHHHHHT
T ss_pred CcCCcEEEEECC-CCcCcHHHHHHHHHHC
Confidence 367999999999 3237899999888643
No 42
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=35.38 E-value=17 Score=31.55 Aligned_cols=28 Identities=32% Similarity=0.180 Sum_probs=23.0
Q ss_pred HcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 10 YKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 10 lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
+.|++|++|||-..-|...||+-++..-
T Consensus 153 l~gl~va~vGD~~~~rva~Sl~~~~~~~ 180 (308)
T 1ml4_A 153 IDGLKIGLLGDLKYGRTVHSLAEALTFY 180 (308)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGS
T ss_pred CCCeEEEEeCCCCcCchHHHHHHHHHHC
Confidence 6789999999976557899998887644
No 43
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=33.13 E-value=1.7 Score=36.42 Aligned_cols=17 Identities=35% Similarity=0.671 Sum_probs=14.2
Q ss_pred HHcCCcEEEEecccchh
Q 036625 9 RYKGKKILFVGDSLSLN 25 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RN 25 (213)
.|-+.+++||||.|+|+
T Consensus 143 IlsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 143 ILSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred EEEeeeeeeecchHHHh
Confidence 45677899999999985
No 44
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=31.37 E-value=21 Score=31.50 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=21.3
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhcc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHA 36 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~ 36 (213)
.+.|++|++|||--+ |-..|++.++..
T Consensus 178 ~l~gl~ia~vGD~~~-~va~S~~~~~~~ 204 (358)
T 4h31_A 178 ALADIQFAYLGDARN-NVGNSLMVGAAK 204 (358)
T ss_dssp CGGGCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CcCceEEEecCCCCc-ccchHHHHHHHh
Confidence 367889999999423 789999988863
No 45
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=29.52 E-value=34 Score=27.45 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=23.1
Q ss_pred HHHHHHHc-----CCcEEEEecccchhhHHHHHHhh
Q 036625 4 RDFLRRYK-----GKKILFVGDSLSLNQWQSLACML 34 (213)
Q Consensus 4 ~~fLe~lR-----gK~l~FVGDSl~RNq~eSLlClL 34 (213)
.+.++.++ .++++++|||.+=|--..+...+
T Consensus 82 ~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~ 117 (274)
T 2qru_A 82 TETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQL 117 (274)
T ss_dssp HHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHH
Confidence 44555555 68999999999998877666443
No 46
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=29.21 E-value=21 Score=19.78 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=13.1
Q ss_pred chhhHHHHHHhhccccC
Q 036625 23 SLNQWQSLACMLHASVP 39 (213)
Q Consensus 23 ~RNq~eSLlClL~~~~~ 39 (213)
.|+||+.|+=-+..+..
T Consensus 6 mr~Q~~~lveKvq~a~~ 22 (26)
T 1oeg_A 6 MQRQWAGLVEKVQAAVG 22 (26)
T ss_dssp TTTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 48999999987775543
No 47
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=28.80 E-value=22 Score=29.34 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=12.1
Q ss_pred cCCcEEEEecccch
Q 036625 11 KGKKILFVGDSLSL 24 (213)
Q Consensus 11 RgK~l~FVGDSl~R 24 (213)
.|+.+++|||+++=
T Consensus 229 ~~~~v~~vGDGiND 242 (297)
T 4fe3_A 229 DNSNIILLGDSQGD 242 (297)
T ss_dssp TCCEEEEEESSGGG
T ss_pred cCCEEEEEeCcHHH
Confidence 46789999999987
No 48
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=28.67 E-value=26 Score=30.22 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=21.9
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||- -|...||+-+|..-
T Consensus 151 ~l~gl~ia~vGD~--~rva~Sl~~~~~~~ 177 (301)
T 2ef0_A 151 GLAGLEVAWVGDG--NNVLNSLLEVAPLA 177 (301)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCC--chhHHHHHHHHHHc
Confidence 3679999999994 57899998887643
No 49
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=28.46 E-value=28 Score=29.91 Aligned_cols=29 Identities=28% Similarity=0.339 Sum_probs=23.7
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.++|++|++|||=.+-|...||+-++..-
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~ 171 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMF 171 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHC
Confidence 36899999999966678899998887643
No 50
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=28.44 E-value=28 Score=30.90 Aligned_cols=28 Identities=25% Similarity=0.253 Sum_probs=22.1
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||-- -|...||+-++..-
T Consensus 173 ~l~gl~va~vGD~~-~rva~Sl~~~~~~l 200 (359)
T 2w37_A 173 KLQGLTLTFMGDGR-NNVANSLLVTGAIL 200 (359)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHHHH
T ss_pred CcCCeEEEEECCCc-cchHHHHHHHHHHc
Confidence 46799999999942 37899999887643
No 51
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=28.32 E-value=28 Score=30.54 Aligned_cols=28 Identities=18% Similarity=0.119 Sum_probs=22.2
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.++|++|++|||- .-|...||+-++..-
T Consensus 152 ~l~gl~va~vGD~-~~~va~Sl~~~~~~~ 179 (335)
T 1dxh_A 152 PLHDISYAYLGDA-RNNMGNSLLLIGAKL 179 (335)
T ss_dssp CGGGCEEEEESCC-SSHHHHHHHHHHHHT
T ss_pred CcCCeEEEEecCC-ccchHHHHHHHHHHc
Confidence 4678999999994 237999999887643
No 52
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=27.29 E-value=28 Score=30.16 Aligned_cols=27 Identities=33% Similarity=0.358 Sum_probs=22.0
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||- -|...||+-++..-
T Consensus 152 ~l~gl~va~vGD~--~rva~Sl~~~~~~~ 178 (315)
T 1pvv_A 152 TIKGVKVVYVGDG--NNVAHSLMIAGTKL 178 (315)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCC--cchHHHHHHHHHHC
Confidence 3679999999994 57899998887643
No 53
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=26.00 E-value=32 Score=30.10 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=21.8
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||- .-|...||+-++..-
T Consensus 152 ~l~gl~ia~vGD~-~~~va~Sl~~~~~~~ 179 (333)
T 1duv_G 152 AFNEMTLVYAGDA-RNNMGNSMLEAAALT 179 (333)
T ss_dssp CGGGCEEEEESCT-TSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCC-ccchHHHHHHHHHHc
Confidence 3678999999994 237899998887643
No 54
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=25.58 E-value=33 Score=29.65 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=22.1
Q ss_pred HHcCCcEEEEecccchhhHHHHHHhhccc
Q 036625 9 RYKGKKILFVGDSLSLNQWQSLACMLHAS 37 (213)
Q Consensus 9 ~lRgK~l~FVGDSl~RNq~eSLlClL~~~ 37 (213)
.+.|++|++|||- .-|...||+-++..-
T Consensus 145 ~l~gl~va~vGD~-~~rva~Sl~~~~~~~ 172 (307)
T 2i6u_A 145 ALRGLRLSYFGDG-ANNMAHSLLLGGVTA 172 (307)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHHHT
T ss_pred CcCCeEEEEECCC-CcCcHHHHHHHHHHC
Confidence 3678999999994 238899998888643
No 55
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=22.68 E-value=37 Score=25.92 Aligned_cols=16 Identities=31% Similarity=0.877 Sum_probs=11.9
Q ss_pred CcEEEEecccchhhHHHH
Q 036625 13 KKILFVGDSLSLNQWQSL 30 (213)
Q Consensus 13 K~l~FVGDSl~RNq~eSL 30 (213)
..++|||||. |-.+.+
T Consensus 118 ~~~~~iGD~~--~Di~~a 133 (188)
T 2r8e_A 118 ENVAYVGDDL--IDWPVM 133 (188)
T ss_dssp GGEEEEESSG--GGHHHH
T ss_pred HHEEEECCCH--HHHHHH
Confidence 6899999998 455443
No 56
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=20.37 E-value=43 Score=25.35 Aligned_cols=13 Identities=23% Similarity=0.664 Sum_probs=10.2
Q ss_pred CCcEEEEecccch
Q 036625 12 GKKILFVGDSLSL 24 (213)
Q Consensus 12 gK~l~FVGDSl~R 24 (213)
.+.+++||||.+=
T Consensus 102 ~~~~~~vGD~~nD 114 (176)
T 3mmz_A 102 PERVLYVGNDVND 114 (176)
T ss_dssp GGGEEEEECSGGG
T ss_pred HHHEEEEcCCHHH
Confidence 3679999999853
No 57
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=20.34 E-value=50 Score=24.12 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=12.4
Q ss_pred CCcEEEEecccchhhHHHH
Q 036625 12 GKKILFVGDSLSLNQWQSL 30 (213)
Q Consensus 12 gK~l~FVGDSl~RNq~eSL 30 (213)
-+.++|||||. |-.+.+
T Consensus 95 ~~~~~~vGD~~--~Di~~~ 111 (164)
T 3e8m_A 95 LEQVAYIGDDL--NDAKLL 111 (164)
T ss_dssp GGGEEEECCSG--GGHHHH
T ss_pred HHHEEEECCCH--HHHHHH
Confidence 35899999999 555444
No 58
>3enc_A Protein PCC1; dimerization domain, keops, telomere, unknown function; 2.63A {Pyrococcus furiosus} PDB: 3eno_C
Probab=20.28 E-value=60 Score=22.89 Aligned_cols=17 Identities=6% Similarity=0.436 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHh
Q 036625 133 LVVFNKGLTTWGKWVDS 149 (213)
Q Consensus 133 ~~ay~~al~t~~~~i~~ 149 (213)
..++|.+|.||++||.-
T Consensus 64 ~~aLRA~lNs~lRlI~v 80 (87)
T 3enc_A 64 SSALRGTVNSYLRWIKA 80 (87)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45899999999999964
Done!