Your job contains 1 sequence.
>036628
PNPFLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIYALFL
HDNWQQHMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVR
CNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQDITQDSVMTWN
RHHQFLVRQRKCTFQHTSRDPAEVEEFRYCFCGAKSFKKIIRKPGPKCGSFFFGCGNLTP
NKGACCNYFHSATA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036628
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A8K979 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 166 2.0e-24 3
UNIPROTKB|E1BJE4 - symbol:ERI2 "Uncharacterized protein" ... 176 1.7e-23 3
UNIPROTKB|F1P8R6 - symbol:ERI2 "Uncharacterized protein" ... 165 1.4e-22 3
WB|WBGene00019724 - symbol:M02B7.2 species:6239 "Caenorha... 181 7.4e-22 2
MGI|MGI:1918401 - symbol:Eri2 "exoribonuclease 2" species... 170 1.3e-21 3
RGD|1583889 - symbol:Eri2 "ERI1 exoribonuclease family me... 166 3.9e-21 3
WB|WBGene00019825 - symbol:R02D3.8 species:6239 "Caenorha... 169 4.6e-19 2
UNIPROTKB|E1BVJ4 - symbol:ERI2 "Uncharacterized protein" ... 161 7.6e-19 2
DICTYBASE|DDB_G0283113 - symbol:eriA "RNA exonuclease" sp... 137 3.5e-17 2
ZFIN|ZDB-GENE-050522-292 - symbol:zgc:111991 "zgc:111991"... 143 1.1e-15 3
UNIPROTKB|Q8IV48 - symbol:ERI1 "3'-5' exoribonuclease 1" ... 144 3.7e-14 2
UNIPROTKB|I3LQQ1 - symbol:ERI1 "Uncharacterized protein" ... 139 1.0e-13 2
MGI|MGI:1914526 - symbol:Eri1 "exoribonuclease 1" species... 140 1.5e-13 2
UNIPROTKB|E2QU14 - symbol:ERI1 "Uncharacterized protein" ... 139 1.6e-13 2
RGD|1308378 - symbol:Eri1 "exoribonuclease 1" species:101... 140 3.9e-13 2
UNIPROTKB|Q32LA2 - symbol:THEX1 "Uncharacterized protein"... 135 5.5e-13 2
UNIPROTKB|F1ML00 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 169 9.1e-13 1
UNIPROTKB|B4DEX5 - symbol:ERI3 "Prion protein interacting... 169 9.1e-13 1
UNIPROTKB|A6QLH5 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 169 7.0e-11 1
UNIPROTKB|O43414 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 169 7.0e-11 1
MGI|MGI:2153887 - symbol:Eri3 "exoribonuclease 3" species... 168 9.9e-11 1
UNIPROTKB|E2RAN5 - symbol:ERI3 "Uncharacterized protein" ... 165 2.5e-10 1
ZFIN|ZDB-GENE-050522-39 - symbol:eri1 "exoribonuclease 1"... 163 4.5e-10 1
UNIPROTKB|G3MZQ7 - symbol:ERI1 "Uncharacterized protein" ... 117 6.1e-10 2
UNIPROTKB|H0Y4B0 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 118 7.7e-10 2
TAIR|locus:2083636 - symbol:AT3G15140 "AT3G15140" species... 130 2.5e-09 2
UNIPROTKB|Q5ZL01 - symbol:ERI1 "Uncharacterized protein" ... 154 5.6e-09 1
UNIPROTKB|H3BN77 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 133 1.3e-08 1
WB|WBGene00001332 - symbol:eri-1 species:6239 "Caenorhabd... 107 3.4e-08 2
RGD|1595859 - symbol:Eri3 "ERI1 exoribonuclease family me... 141 9.6e-08 1
UNIPROTKB|F1NBT2 - symbol:F1NBT2 "Uncharacterized protein... 134 4.0e-07 1
UNIPROTKB|I3L645 - symbol:ERI2 "Uncharacterized protein" ... 118 6.5e-07 1
UNIPROTKB|F6UGJ8 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 134 6.8e-07 1
UNIPROTKB|F1S331 - symbol:ERI3 "Uncharacterized protein" ... 134 7.0e-07 1
UNIPROTKB|F6QUN3 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 119 7.0e-06 1
WB|WBGene00000797 - symbol:crn-4 species:6239 "Caenorhabd... 101 9.0e-05 2
>UNIPROTKB|A8K979 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 OrthoDB:EOG4F1X2H EMBL:AK127391
EMBL:AK292594 EMBL:BC010503 EMBL:AB040937 IPI:IPI00027086
IPI:IPI00444503 IPI:IPI00555642 IPI:IPI00872685
RefSeq:NP_001136197.1 RefSeq:NP_542394.2 UniGene:Hs.248437
ProteinModelPortal:A8K979 SMR:A8K979 STRING:A8K979
PhosphoSite:A8K979 PRIDE:A8K979 DNASU:112479
Ensembl:ENST00000300005 Ensembl:ENST00000357967
Ensembl:ENST00000389345 Ensembl:ENST00000563117
Ensembl:ENST00000564349 Ensembl:ENST00000569729 GeneID:112479
KEGG:hsa:112479 UCSC:uc002dhs.3 UCSC:uc002dht.3 UCSC:uc002dhu.1
CTD:112479 GeneCards:GC16M020791 HGNC:HGNC:30541 HPA:HPA035384
neXtProt:NX_A8K979 PharmGKB:PA164719245 HOGENOM:HOG000112417
HOVERGEN:HBG097018 InParanoid:A8K979 OMA:PFLLPSW GenomeRNAi:112479
NextBio:78594 Bgee:A8K979 CleanEx:HS_ERI2 Genevestigator:A8K979
Uniprot:A8K979
Length = 691
Score = 166 (63.5 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 76 AVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC--NLKEAV-ELG-- 130
A VTWSDWD V LE EC+ K + KP + N WI+LR + R L A+ E+G
Sbjct: 148 AFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIE 207
Query: 131 WHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
+ GR H GLDDS N A L +++ G IT+SL
Sbjct: 208 FSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
Score = 133 (51.9 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 10 QDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
Q FDY +V+DFE+TC D K H QEIIEFP+V+++ TGQI FQ Y
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAY 80
Score = 77 (32.2 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGC--GNLTPNKGACCNYF 249
C CG +S + ++ GP G F+ C G N+ CC YF
Sbjct: 597 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYF 637
>UNIPROTKB|E1BJE4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 Pfam:PF00929 GO:GO:0008270
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02057647 IPI:IPI00687052
ProteinModelPortal:E1BJE4 Ensembl:ENSBTAT00000008456 OMA:ALDCLPM
Uniprot:E1BJE4
Length = 689
Score = 176 (67.0 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 49/132 (37%), Positives = 67/132 (50%)
Query: 76 AVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC--NLKEAV-ELGWH 132
A VTWSDWD V LE EC+ K + KP + N WI+LRV + R L A+ E+G
Sbjct: 148 AFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQ 207
Query: 133 --GRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQDITQDSVMTWNRHHQFLVRQR 190
GR H GLDDS N A L +++ G IT+SL ++ T N + +
Sbjct: 208 FLGREHFGLDDSRNTALLAWKMIRDGCLMKITRSLNKVSTKRIPNIFTRNLNMDQVEETS 267
Query: 191 KCTFQHTSRDPA 202
CT + + DP+
Sbjct: 268 TCT--NNTHDPS 277
Score = 114 (45.2 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 10 QDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
Q FDY +++DFE+TC D K QE++EFP+V+++ TG+I F Y
Sbjct: 32 QLFDYLIIIDFESTCWNDGKRHRSQEVVEFPAVLLNTSTGEIESEFHAY 80
Score = 69 (29.3 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGCG-NLTPNKGACCNYF 249
C CG +S + + GP G F+ C K CC YF
Sbjct: 595 CKCGRRSKRLTVSNNGPNHGKVFYCCPVGKYQEKRKCCGYF 635
>UNIPROTKB|F1P8R6 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OMA:ALDCLPM EMBL:AAEX03004472 Ensembl:ENSCAFT00000028477
Uniprot:F1P8R6
Length = 658
Score = 165 (63.1 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 39/95 (41%), Positives = 52/95 (54%)
Query: 76 AVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFS-----KGDVRCNLKEAVELG 130
A VTWSDWD V LE EC+ K + KP + N WI+LRV + K + V +
Sbjct: 148 AFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIE 207
Query: 131 WHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
+ G+ H GLDDS N A L +++ G IT+SL
Sbjct: 208 FLGQEHSGLDDSRNTAMLAWKMIRDGCLMKITRSL 242
Score = 116 (45.9 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 10 QDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
Q FDY +V+DFE+TC D K QEI+EFP+V+++ TG+I F Y
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHQSQEIVEFPAVLLNTSTGEIESEFHAY 80
Score = 77 (32.2 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGC--GNLTPNKGACCNYF 249
C CG +S + ++ GP G F+ C G N+ CC YF
Sbjct: 585 CKCGRRSKRLVVTNNGPNHGKVFYCCPVGKYQENR-KCCGYF 625
>WB|WBGene00019724 [details] [associations]
symbol:M02B7.2 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353 EMBL:FO081251
PIR:T29900 RefSeq:NP_500418.1 ProteinModelPortal:Q94285 SMR:Q94285
STRING:Q94285 PaxDb:Q94285 EnsemblMetazoa:M02B7.2 GeneID:187397
KEGG:cel:CELE_M02B7.2 UCSC:M02B7.2 CTD:187397 WormBase:M02B7.2
InParanoid:Q94285 OMA:CTWINIK NextBio:935118 Uniprot:Q94285
Length = 266
Score = 181 (68.8 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 62 DNW-QQHMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVP------- 113
D+W ++ + NFA VT DWD +V L SE +FKNI P YFN+WIN++
Sbjct: 144 DSWLKEDSRLKQGNFAFVTCGDWDLKVALPSEAKFKNIEIPEYFNQWINVKKAYAEHTNH 203
Query: 114 FSKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTT 167
F+KG + L +L GR+H G+DD NI ++ + + G + IT S T
Sbjct: 204 FAKGMTQ--LLAIYKLQHQGRLHSGIDDVANICEIVRCLGRDGHNYRITGSKDT 255
Score = 101 (40.6 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 PFLPQKL-QDFDYFVVVDFEATCDK--KIP-HP-QEIIEFPSVIVS 43
P QK+ Q FDY +V+DFEATC K P HP QEIIEFP V +S
Sbjct: 48 PTKNQKISQHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLS 93
>MGI|MGI:1918401 [details] [associations]
symbol:Eri2 "exoribonuclease 2" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
MGI:MGI:1918401 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 GeneTree:ENSGT00530000063205
HSSP:Q8IV48 CTD:112479 HOVERGEN:HBG097018 EMBL:AK029056
EMBL:AK135821 EMBL:AK160698 EMBL:AK165163 EMBL:BC090961
IPI:IPI00404329 RefSeq:NP_081974.3 UniGene:Mm.274160
ProteinModelPortal:Q5BKS4 SMR:Q5BKS4 PhosphoSite:Q5BKS4
PRIDE:Q5BKS4 Ensembl:ENSMUST00000150844 GeneID:71151 KEGG:mmu:71151
UCSC:uc009jlu.2 InParanoid:Q5BKS4 NextBio:333139 Bgee:Q5BKS4
Genevestigator:Q5BKS4 Uniprot:Q5BKS4
Length = 688
Score = 170 (64.9 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 44/96 (45%), Positives = 55/96 (57%)
Query: 76 AVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVP---FSKGDVRCNLKEAV-ELG- 130
A VTWSDWD V LE ECR K + KP + N WI+LR F K + L A+ E+G
Sbjct: 148 AFVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPK-GLSGALQEVGI 206
Query: 131 -WHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
+ GR H GLDDS N A L +++ G IT+SL
Sbjct: 207 EFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
Score = 104 (41.7 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 2 NPFLPQKLQDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
NP + Q + Y +VVDFE+TC D K EIIEFP+V+++ TG+I F Y
Sbjct: 24 NPGGSRLKQLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAY 80
Score = 72 (30.4 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGC--GNLTPNKGACCNYF 249
C CG +S + I+ GP G F+ C G ++ CC YF
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQQDR-KCCGYF 634
>RGD|1583889 [details] [associations]
symbol:Eri2 "ERI1 exoribonuclease family member 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
RGD:1583889 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OrthoDB:EOG4F1X2H CTD:112479 OMA:ALDCLPM IPI:IPI00958369
RefSeq:NP_001178043.1 UniGene:Rn.198513 ProteinModelPortal:D4A625
Ensembl:ENSRNOT00000019747 GeneID:691484 KEGG:rno:691484
UCSC:RGD:1583889 NextBio:743149 Uniprot:D4A625
Length = 687
Score = 166 (63.5 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 76 AVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC--NLKEAV-ELG-- 130
A VTWSDWD V LE EC+ K + KP + N WI+LR + R L A+ E+G
Sbjct: 148 AFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYNRKPKGLSGALQEVGIE 207
Query: 131 WHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
+ GR H GLDDS N A L +++ G IT+SL
Sbjct: 208 FSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
Score = 111 (44.1 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 2 NPFLPQKLQDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
NP + Q +DY +VVDFE+TC D K EIIEFP+V+++ TG+I F Y
Sbjct: 24 NPGGSRFRQLYDYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAY 80
Score = 67 (28.6 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGC--GNLTPNKGACCNYF 249
C CG +S + I+ GP G F+ C G +K +C +YF
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQEDKKSC-SYF 634
>WB|WBGene00019825 [details] [associations]
symbol:R02D3.8 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:FO081663
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353
OMA:PYFMEWI PIR:T15066 PIR:T28707 RefSeq:NP_499887.1
ProteinModelPortal:Q9TZZ9 SMR:Q9TZZ9 STRING:Q9TZZ9
EnsemblMetazoa:R02D3.8 GeneID:176845 KEGG:cel:CELE_R02D3.8
UCSC:R02D3.8 CTD:176845 WormBase:R02D3.8 InParanoid:Q9TZZ9
NextBio:894262 Uniprot:Q9TZZ9
Length = 266
Score = 169 (64.5 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 41/114 (35%), Positives = 59/114 (51%)
Query: 62 DNW-QQHMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVP------- 113
D+W ++ + FA VT DWD +V L +E +FKNI P YFN+WIN++
Sbjct: 144 DSWLKEDSRLEKGKFAFVTCGDWDLKVALPNEAKFKNIGIPEYFNQWINVKKASAEHTNH 203
Query: 114 FSKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTT 167
F+KG + L +L GR H G+DD NI ++ + G + IT S T
Sbjct: 204 FAKGIAQ--LLAIYKLQHQGRHHSGIDDVANICEIVRCLGMNGHNYQITGSKDT 255
Score = 100 (40.3 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 26/42 (61%), Positives = 30/42 (71%)
Query: 7 QKL-QDFDYFVVVDFEATCDK--KIP-HP-QEIIEFPSVIVS 43
QK+ Q FDY +V+DFEATC K P HP QEIIEFP V +S
Sbjct: 52 QKMSQHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLS 93
Score = 39 (18.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 3 PFLPQKLQDFDYFVVVD 19
P LPQ L +FD ++ D
Sbjct: 134 PTLPQVLSEFDSWLKED 150
>UNIPROTKB|E1BVJ4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:PFLLPSW
EMBL:AADN02064630 IPI:IPI00578773 ProteinModelPortal:E1BVJ4
Ensembl:ENSGALT00000003470 Uniprot:E1BVJ4
Length = 241
Score = 161 (61.7 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 39/93 (41%), Positives = 49/93 (52%)
Query: 78 VTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFS-----KGDVRCNLKEAVELGWH 132
VTW+DWD V L EC+ K + KP FN WI+L+ + K + V L +
Sbjct: 147 VTWTDWDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYNRKPKGLSGALQYVGLAFV 206
Query: 133 GRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
GR H GLDDS N ARL ++ G ITKSL
Sbjct: 207 GREHSGLDDSRNTARLAWRLICDGCVLKITKSL 239
Score = 105 (42.0 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 7 QKLQDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
++ +FD+ +V+DFE+TC D + P EIIEFP+V+++ TG+I F +
Sbjct: 27 ERRSEFDFLLVLDFESTCWRDARQRRP-EIIEFPAVLLNAATGRIEAEFHTF 77
>DICTYBASE|DDB_G0283113 [details] [associations]
symbol:eriA "RNA exonuclease" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 dictyBase:DDB_G0283113
Pfam:PF00929 GenomeReviews:CM000153_GR GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AAFI02000050
eggNOG:COG5018 RefSeq:XP_639244.1 ProteinModelPortal:Q54RJ2
EnsemblProtists:DDB0231961 GeneID:8623930 KEGG:ddi:DDB_G0283113
InParanoid:Q54RJ2 OMA:KRHEMEI ProtClustDB:CLSZ2728980
Uniprot:Q54RJ2
Length = 220
Score = 137 (53.3 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 28/97 (28%), Positives = 51/97 (52%)
Query: 75 FAVVTWSDWDCQVMLESECRF-KNIPKPSYFNRWINLRVPFSKGDVR-----CNLKEAVE 128
+ V DWD L + + N+ KPSY ++WIN++ ++ R N+ +
Sbjct: 120 YCFVCCGDWDLLQCLPKQLKLCNNLSKPSYLSKWINIKKQYTLFYNRPSFGMTNMLRELN 179
Query: 129 LGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
+ GR HCGL DS+NI+++L +++ G F + ++
Sbjct: 180 IPLEGRHHCGLSDSLNISKILKRMIEEGCNFDLVSTM 216
Score = 122 (48.0 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 10 QDFDYFVVVDFEATCDKKIPHP-QEIIEFPSVIVSGVTGQITVCFQIY 56
Q F Y +V+DFEATC+K + P QEIIEFPSVI++ T + F+ Y
Sbjct: 19 QKFKYLIVLDFEATCEKDVKFPNQEIIEFPSVIINTETLETVSTFREY 66
>ZFIN|ZDB-GENE-050522-292 [details] [associations]
symbol:zgc:111991 "zgc:111991" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-050522-292 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BC095637 IPI:IPI00607271 RefSeq:NP_001018476.1
UniGene:Dr.89386 HSSP:Q8IV48 ProteinModelPortal:Q502M8 PRIDE:Q502M8
GeneID:553667 KEGG:dre:553667 eggNOG:NOG304111 InParanoid:Q502M8
OrthoDB:EOG4F1X2H NextBio:20880400 Uniprot:Q502M8
Length = 555
Score = 143 (55.4 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 46/142 (32%), Positives = 67/142 (47%)
Query: 76 AVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC--NLKEAV-ELG-- 130
A VTWSDWD V L EC+ K + P WI+LR + R L+ A+ +LG
Sbjct: 144 AFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIE 203
Query: 131 WHGRVHCGLDDSMNIARLLAVIMQRGFKFSIT----KSLTTPQDITQDSVMTWNRHHQFL 186
+ GR H GL D+ N A L +M G + SIT ++ P+ T+ S + H
Sbjct: 204 FTGREHSGLVDARNTALLAQRMMTDGCQLSITSPERRAQVKPRPHTRPSGLRERHTHLTN 263
Query: 187 VRQRKCTFQHTSRDPAEVEEFR 208
V+ + T +T+ V+ R
Sbjct: 264 VKNSRDTHTNTNTHLTNVKNSR 285
Score = 99 (39.9 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 10 QDFDYFVVVDFEATC-DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
Q F + +++DFE+TC +K QEIIEFP+V++S +G + F Y
Sbjct: 30 QRFSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSY 77
Score = 55 (24.4 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGCGNLTPNKGA-CCNYF 249
C CG ++ + + GP G F+ C N C++F
Sbjct: 488 CVCGRRARRLTVGNGGPNHGRVFYCCPRRRSNTHTHTCDFF 528
>UNIPROTKB|Q8IV48 [details] [associations]
symbol:ERI1 "3'-5' exoribonuclease 1" species:9606 "Homo
sapiens" [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0031125 "rRNA 3'-end processing"
evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337
Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513
Pfam:PF00929 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
DrugBank:DB00131 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 EMBL:AY310909 EMBL:AK291062 EMBL:AL137679
EMBL:BC035279 IPI:IPI00216873 PIR:T46432 RefSeq:NP_699163.2
UniGene:Hs.20000 PDB:1W0H PDB:1ZBH PDB:1ZBU PDBsum:1W0H PDBsum:1ZBH
PDBsum:1ZBU ProteinModelPortal:Q8IV48 SMR:Q8IV48 STRING:Q8IV48
PhosphoSite:Q8IV48 DMDM:45476938 PaxDb:Q8IV48 PeptideAtlas:Q8IV48
PRIDE:Q8IV48 DNASU:90459 Ensembl:ENST00000250263
Ensembl:ENST00000519292 Ensembl:ENST00000523898 GeneID:90459
KEGG:hsa:90459 UCSC:uc003wsk.2 CTD:90459 GeneCards:GC08P008900
HGNC:HGNC:23994 HPA:CAB033838 MIM:608739 neXtProt:NX_Q8IV48
PharmGKB:PA164719226 HOGENOM:HOG000006635 HOVERGEN:HBG048925
InParanoid:Q8IV48 OMA:ICVIDFE OrthoDB:EOG4NGGN1 PhylomeDB:Q8IV48
EvolutionaryTrace:Q8IV48 GenomeRNAi:90459 NextBio:76770
ArrayExpress:Q8IV48 Bgee:Q8IV48 CleanEx:HS_ERI1
Genevestigator:Q8IV48 GermOnline:ENSG00000104626 GO:GO:0071204
GO:GO:0071207 Uniprot:Q8IV48
Length = 349
Score = 144 (55.7 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 63 NWQQ--HMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------V 112
+W + +G T ++++T WD L +C+ + P + +WIN+R V
Sbjct: 212 DWMKLKELG-TKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKV 270
Query: 113 PFSKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQ 169
P S+ + L E + + + GR HCGLDDS NIAR+ ++Q G + I + + Q
Sbjct: 271 PRSQTKLTIML-EKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKMHAGQ 326
Score = 97 (39.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 12 FDYFVVVDFEATCDKKIPHPQ---EIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P P+ EIIEFP V+++ T +I FQ Y
Sbjct: 127 YDYICIIDFEATCEEGNP-PEFVHEIIEFPVVLLNTHTLEIEDTFQQY 173
>UNIPROTKB|I3LQQ1 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 Ensembl:ENSSSCT00000031051 Uniprot:I3LQQ1
Length = 313
Score = 139 (54.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 34/117 (29%), Positives = 58/117 (49%)
Query: 63 NWQQ--HMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------V 112
+W + +G T ++++T WD L +CR + P + +WIN+R V
Sbjct: 176 DWMKLKELG-TKYKYSILTDGSWDMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKV 234
Query: 113 PFSKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQ 169
P S+ + L E + + + GR H GLDDS NIAR+ ++Q G + + + + Q
Sbjct: 235 PRSQTKLTIML-EKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRVNEKMHAGQ 290
Score = 97 (39.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 12 FDYFVVVDFEATCDKKIPHPQ---EIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P P+ EIIEFP V+++ T +I FQ Y
Sbjct: 91 YDYICIIDFEATCEEGNP-PEFIHEIIEFPVVLLNTHTLEIEDTFQQY 137
>MGI|MGI:1914526 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IDA] [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=IDA] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IDA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 MGI:MGI:1914526 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175
GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OrthoDB:EOG4NGGN1
GO:GO:0071204 GO:GO:0071207 EMBL:AK014041 EMBL:AK014410
EMBL:AK050230 EMBL:AK165026 EMBL:AK172005 EMBL:BC046412
IPI:IPI00330329 RefSeq:NP_080343.4 UniGene:Mm.207534
ProteinModelPortal:Q7TMF2 SMR:Q7TMF2 STRING:Q7TMF2
PhosphoSite:Q7TMF2 PRIDE:Q7TMF2 Ensembl:ENSMUST00000033927
GeneID:67276 KEGG:mmu:67276 UCSC:uc009lky.2 InParanoid:Q3TNT0
NextBio:324080 Bgee:Q7TMF2 CleanEx:MM_THEX1 Genevestigator:Q7TMF2
GermOnline:ENSMUSG00000031527 Uniprot:Q7TMF2
Length = 345
Score = 140 (54.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 71 TPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------VPFSKGDVRCN 122
T + ++T WD L +CR + P++ +WIN+R VP S+ +
Sbjct: 217 TKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIM 276
Query: 123 LKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
L E + + + GR H GLDDS NIAR+ ++Q G + I + +
Sbjct: 277 L-EKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKI 318
Score = 96 (38.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 12 FDYFVVVDFEATCDKKIPHP--QEIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P EIIEFP V+++ T +I FQ Y
Sbjct: 123 YDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQY 169
>UNIPROTKB|E2QU14 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 CTD:90459 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 EMBL:AAEX03010431 RefSeq:XP_539997.2
Ensembl:ENSCAFT00000010754 GeneID:482882 KEGG:cfa:482882
NextBio:20857381 Uniprot:E2QU14
Length = 349
Score = 139 (54.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 63 NWQQ--HMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------V 112
+W + +G T + ++T WD L +CR + P + +WIN+R V
Sbjct: 212 DWMKLKELG-TKYKYCILTDGSWDMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKV 270
Query: 113 PFSKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQ 169
P S+ + L E + + + GR H GLDDS NIAR+ ++Q G + I + + Q
Sbjct: 271 PRSQTKLTIML-EKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKMHAGQ 326
Score = 97 (39.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 12 FDYFVVVDFEATCDKKIPHPQ---EIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P P+ EIIEFP V+++ T +I FQ Y
Sbjct: 127 YDYICIIDFEATCEEGNP-PEFIHEIIEFPVVLLNTHTLEIEDTFQQY 173
>RGD|1308378 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO;ISS] [GO:0019843 "rRNA binding" evidence=ISO;ISS]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA
3'-end processing" evidence=ISO;ISS] [GO:0043022 "ribosome binding"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISO;ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISO;ISS] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 RGD:1308378 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:BC089828
IPI:IPI00364660 RefSeq:NP_001014165.1 UniGene:Rn.17469
ProteinModelPortal:Q5FVR4 SMR:Q5FVR4 STRING:Q5FVR4 PRIDE:Q5FVR4
Ensembl:ENSRNOT00000015239 GeneID:361159 KEGG:rno:361159
UCSC:RGD:1308378 InParanoid:Q5FVR4 NextBio:675391
Genevestigator:Q5FVR4 GermOnline:ENSRNOG00000011448 Uniprot:Q5FVR4
Length = 345
Score = 140 (54.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 71 TPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------VPFSKGDVRCN 122
T + ++T WD L +C+ + PS+ +WIN+R VP S+ +
Sbjct: 217 TKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIM 276
Query: 123 LKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
L E + + + GR H GLDDS NIAR+ ++Q G + I + L
Sbjct: 277 L-EKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKL 318
Score = 92 (37.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 12 FDYFVVVDFEATCDKKIPHP--QEIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P EIIEFP V+++ + +I FQ Y
Sbjct: 123 YDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQY 169
>UNIPROTKB|Q32LA2 [details] [associations]
symbol:THEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOVERGEN:HBG048925
OMA:ICVIDFE EMBL:DAAA02060421 EMBL:BC109681 IPI:IPI00692488
RefSeq:NP_001033281.1 UniGene:Bt.22450 SMR:Q32LA2
Ensembl:ENSBTAT00000012775 GeneID:540728 KEGG:bta:540728
InParanoid:Q32LA2 NextBio:20878798 Uniprot:Q32LA2
Length = 349
Score = 135 (52.6 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 63 NWQQ--HMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------V 112
+W + +G T ++++T WD L +C+ + P + +WIN+R V
Sbjct: 212 DWMKLKELG-TKYKYSILTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKV 270
Query: 113 PFSKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQ 169
P S+ + L E + + + GR H GLDDS NIAR+ ++Q G + + + + Q
Sbjct: 271 PRSQTKLTIML-EKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRVNEKMHAGQ 326
Score = 97 (39.2 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 12 FDYFVVVDFEATCDKKIPHPQ---EIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P P+ EIIEFP V+++ T +I FQ Y
Sbjct: 127 YDYICIIDFEATCEEGNP-PEFIHEIIEFPVVLLNTHTLEIEDTFQQY 173
>UNIPROTKB|F1ML00 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 UniGene:Bt.5101 EMBL:DAAA02009029
EMBL:DAAA02009030 IPI:IPI00903627 ProteinModelPortal:F1ML00
SMR:F1ML00 Ensembl:ENSBTAT00000034295 ArrayExpress:F1ML00
Uniprot:F1ML00
Length = 160
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 47/147 (31%), Positives = 71/147 (48%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 14 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 70
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC-------NLKEAVELGWHGRV 135
WD +VML +C++ +P YF +WINL+ +S + C ++ + + L GR
Sbjct: 71 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFA-MGCWPKNGLLDMNKGLSLQHIGRP 129
Query: 136 HCGLDDSMNIARLLAVIMQRGFKFSIT 162
H G+DD NIA ++ + RGF F T
Sbjct: 130 HSGIDDCKNIANIMKTLAYRGFIFKQT 156
>UNIPROTKB|B4DEX5 [details] [associations]
symbol:ERI3 "Prion protein interacting protein, isoform
CRA_d" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
EMBL:CH471059 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
HOGENOM:HOG000218353 EMBL:AL390776 IPI:IPI00644349
UniGene:Hs.731413 HGNC:HGNC:17276 EMBL:AK293833 SMR:B4DEX5
STRING:B4DEX5 Ensembl:ENST00000537474 UCSC:uc010okv.2
HOVERGEN:HBG058704 Uniprot:B4DEX5
Length = 160
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 47/147 (31%), Positives = 71/147 (48%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 14 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 70
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC-------NLKEAVELGWHGRV 135
WD +VML +C++ +P YF +WINL+ +S + C ++ + + L GR
Sbjct: 71 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFA-MGCWPKNGLLDMNKGLSLQHIGRP 129
Query: 136 HCGLDDSMNIARLLAVIMQRGFKFSIT 162
H G+DD NIA ++ + RGF F T
Sbjct: 130 HSGIDDCKNIANIMKTLAYRGFIFKQT 156
>UNIPROTKB|A6QLH5 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 EMBL:BC147967 IPI:IPI00692999
RefSeq:NP_001106713.1 UniGene:Bt.5101 ProteinModelPortal:A6QLH5
Ensembl:ENSBTAT00000020671 GeneID:540516 KEGG:bta:540516 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 InParanoid:A6QLH5
OMA:FPALTEH OrthoDB:EOG4ZKJMJ NextBio:20878677 ArrayExpress:A6QLH5
Uniprot:A6QLH5
Length = 337
Score = 169 (64.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 47/147 (31%), Positives = 71/147 (48%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 191 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 247
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC-------NLKEAVELGWHGRV 135
WD +VML +C++ +P YF +WINL+ +S + C ++ + + L GR
Sbjct: 248 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFA-MGCWPKNGLLDMNKGLSLQHIGRP 306
Query: 136 HCGLDDSMNIARLLAVIMQRGFKFSIT 162
H G+DD NIA ++ + RGF F T
Sbjct: 307 HSGIDDCKNIANIMKTLAYRGFIFKQT 333
Score = 134 (52.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 FLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
F PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 138 FPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 187
>UNIPROTKB|O43414 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 EMBL:AL035417 CTD:79033 HOVERGEN:HBG108293
OrthoDB:EOG4ZKJMJ EMBL:AF007157 EMBL:AK290567 EMBL:AL390776
EMBL:AC004254 EMBL:BC001072 EMBL:BC004456 IPI:IPI00020701
IPI:IPI00644349 IPI:IPI00888358 RefSeq:NP_076971.1
UniGene:Hs.731413 PDB:2XRI PDBsum:2XRI ProteinModelPortal:O43414
SMR:O43414 STRING:O43414 PhosphoSite:O43414 PaxDb:O43414
PRIDE:O43414 DNASU:79033 Ensembl:ENST00000372257
Ensembl:ENST00000372259 GeneID:79033 KEGG:hsa:79033 UCSC:uc001clt.3
GeneCards:GC01M044686 HGNC:HGNC:17276 HPA:HPA027147 MIM:609917
neXtProt:NX_O43414 PharmGKB:PA164719272 EvolutionaryTrace:O43414
GenomeRNAi:79033 NextBio:67747 ArrayExpress:O43414 Bgee:O43414
CleanEx:HS_ERI3 Genevestigator:O43414 Uniprot:O43414
Length = 337
Score = 169 (64.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 47/147 (31%), Positives = 71/147 (48%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 191 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 247
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC-------NLKEAVELGWHGRV 135
WD +VML +C++ +P YF +WINL+ +S + C ++ + + L GR
Sbjct: 248 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFA-MGCWPKNGLLDMNKGLSLQHIGRP 306
Query: 136 HCGLDDSMNIARLLAVIMQRGFKFSIT 162
H G+DD NIA ++ + RGF F T
Sbjct: 307 HSGIDDCKNIANIMKTLAYRGFIFKQT 333
Score = 134 (52.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 FLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
F PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 138 FPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 187
>MGI|MGI:2153887 [details] [associations]
symbol:Eri3 "exoribonuclease 3" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2153887
GO:GO:0005886 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HSSP:Q8IV48 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 OMA:FPALTEH
OrthoDB:EOG4ZKJMJ EMBL:AK083017 EMBL:AK144107 EMBL:AL645740
EMBL:AL671520 EMBL:BC079640 EMBL:BC116685 EMBL:BC117540
EMBL:AY029599 IPI:IPI00225264 IPI:IPI00471104 IPI:IPI00649884
RefSeq:NP_536717.2 UniGene:Mm.235891 ProteinModelPortal:Q8C460
SMR:Q8C460 STRING:Q8C460 PhosphoSite:Q8C460 PaxDb:Q8C460
PRIDE:Q8C460 DNASU:140546 Ensembl:ENSMUST00000037127
Ensembl:ENSMUST00000125312 Ensembl:ENSMUST00000144373 GeneID:140546
KEGG:mmu:140546 UCSC:uc008uis.1 UCSC:uc008uit.1 InParanoid:Q8C460
ChiTaRS:ERI3 NextBio:369851 Bgee:Q8C460 CleanEx:MM_PRNPIP1
Genevestigator:Q8C460 Uniprot:Q8C460
Length = 337
Score = 168 (64.2 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 47/147 (31%), Positives = 70/147 (47%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 191 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 247
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC-------NLKEAVELGWHGRV 135
WD +VML +C + +P YF +WINL+ +S + C ++ + + L GR
Sbjct: 248 WDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFA-MGCWPKNGLLDMNKGLSLQHIGRP 306
Query: 136 HCGLDDSMNIARLLAVIMQRGFKFSIT 162
H G+DD NIA ++ + RGF F T
Sbjct: 307 HSGIDDCKNIANIMKTLAYRGFIFKQT 333
Score = 141 (54.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 3 PFLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
PF PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 137 PFPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 187
>UNIPROTKB|E2RAN5 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:79033 OMA:FPALTEH
EMBL:AAEX03009798 EMBL:AAEX03009797 RefSeq:XP_850849.2
Ensembl:ENSCAFT00000007745 GeneID:475384 KEGG:cfa:475384
Uniprot:E2RAN5
Length = 337
Score = 165 (63.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 191 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 247
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKGDVRC-------NLKEAVELGWHGRV 135
WD +VML +C++ +P YF +WINL+ +S + C ++ + + L GR
Sbjct: 248 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFA-MGCWPKNGLLDMNKGLSLQHIGRP 306
Query: 136 HCGLDDSMNIARLLAVIMQRGFKFSIT 162
H G+DD NIA ++ + +GF F T
Sbjct: 307 HSGIDDCKNIANIMKTLAYQGFIFKQT 333
Score = 141 (54.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 3 PFLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
PF PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 137 PFPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 187
>ZFIN|ZDB-GENE-050522-39 [details] [associations]
symbol:eri1 "exoribonuclease 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 SMART:SM00479 SMART:SM00513
Pfam:PF00929 ZFIN:ZDB-GENE-050522-39 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOGENOM:HOG000006635
HOVERGEN:HBG048925 EMBL:BX511222 EMBL:BC095343 IPI:IPI00631298
RefSeq:NP_001018450.1 UniGene:Dr.15106 SMR:Q503G0
Ensembl:ENSDART00000065671 GeneID:553641 KEGG:dre:553641
InParanoid:Q503G0 NextBio:20880375 Uniprot:Q503G0
Length = 337
Score = 163 (62.4 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 6 PQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIYALFLHD--N 63
P L D +VD K + HPQ + EF V ++G+T ++ + + L +
Sbjct: 143 PMVLIDTHTLEIVDSFQEYVKPVLHPQ-LSEF-CVKLTGITQEMVDEAKTFHQVLKRAIS 200
Query: 64 WQQHMGV-TPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLR--------VPF 114
W Q + T + +T WD L ++C+ I P + +WIN+R VP
Sbjct: 201 WLQEKELGTKYKYMFLTDGSWDMGKFLHTQCKLSRIRYPQFARKWINIRKSYGNFYKVPR 260
Query: 115 SKGDVRCNLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSL 165
++ + C L E + + + GR HCGLDDS NIAR+ +++ G + + + L
Sbjct: 261 TQTKLICML-ENLGMEYDGRPHCGLDDSRNIARIAIHMLKDGCQLRVNECL 310
>UNIPROTKB|G3MZQ7 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02070439
Ensembl:ENSBTAT00000064195 OMA:PQLSKFC Uniprot:G3MZQ7
Length = 349
Score = 117 (46.2 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 25/116 (21%), Positives = 56/116 (48%)
Query: 63 NWQQ--HMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFS----- 115
+W + +G T ++++T WD L +C+ + P + +WI+++ +
Sbjct: 212 DWMKLKELG-TKYKYSILTDGSWDMSKFLNIQCQLSRLKYPPFAKKWISIQKSYGNFYKV 270
Query: 116 -KGDVRCNLK-EAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITKSLTTPQ 169
+ ++ + E + + + G H GLDDS N+AR+ ++Q G + + + + Q
Sbjct: 271 PRSQIKLTIMLEKLGMDYDGWPHSGLDDSKNVARIAVRMLQDGCELRVNEKMHAGQ 326
Score = 89 (36.4 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 12 FDYFVVVDFEATCDKKIPHPQ---EIIEFPSVIVSGVTGQITVCFQIY 56
+DY ++DFEATC++ P P+ EIIEF V+++ T +I FQ Y
Sbjct: 127 YDYICIIDFEATCEEGNP-PEFIHEIIEFSVVLLNTHTLEIEDTFQQY 173
>UNIPROTKB|H0Y4B0 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
EMBL:AL390776 HGNC:HGNC:17276 ProteinModelPortal:H0Y4B0 SMR:H0Y4B0
PRIDE:H0Y4B0 Ensembl:ENST00000456170 Bgee:H0Y4B0 Uniprot:H0Y4B0
Length = 204
Score = 118 (46.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 30 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 86
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFSKG 117
WD +VML +C++ +P YF +WINL+ S G
Sbjct: 87 WDLKVMLPGQCQYLGLPVADYFKQWINLKKGSSPG 121
Score = 75 (31.5 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 122 NLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSIT 162
++ + + L GR H G+DD NIA ++ + RGF F T
Sbjct: 160 DMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQT 200
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 210 CFCGAKSFKKIIRKPGPKCGSFFFGC----GNLTPNKG 243
C+ ++ +K PG K SF GC G L NKG
Sbjct: 128 CYQSEEAQRKE-NTPGVKAYSFAMGCWPKNGLLDMNKG 164
>TAIR|locus:2083636 [details] [associations]
symbol:AT3G15140 "AT3G15140" species:3702 "Arabidopsis
thaliana" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
HSSP:Q8IV48 HOGENOM:HOG000218353 EMBL:AP001299 EMBL:AF419612
EMBL:AY079112 IPI:IPI00525491 RefSeq:NP_566502.1 UniGene:At.27380
ProteinModelPortal:Q8W566 SMR:Q8W566 EnsemblPlants:AT3G15140.1
GeneID:820745 KEGG:ath:AT3G15140 TAIR:At3g15140 InParanoid:Q8W566
OMA:PYFMEWI PhylomeDB:Q8W566 ProtClustDB:CLSN2688393
Genevestigator:Q8W566 Uniprot:Q8W566
Length = 337
Score = 130 (50.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 48 QITVCFQIYALFLHDNWQQHMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRW 107
Q+ F+++ L HD W + + A VT +WD + + +C NI P YF W
Sbjct: 199 QVVEEFEVW-LAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNINLPPYFMEW 257
Query: 108 INLR---VPFSKGDVRCNLKEAVELGWH--GRVHCGLDDSMNIARLLAVIMQRGFKFSIT 162
INL+ + F + R + + G G H G+DD+ NI R++ ++ G +T
Sbjct: 258 INLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRMLSEGAVLKLT 317
Score = 67 (28.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 7 QKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCF 53
+K Q+F++F+V+D E K+ EI+EFP +IV T ++ F
Sbjct: 121 KKSQEFNFFLVIDLEG----KV----EILEFPILIVDAKTMEVVDLF 159
>UNIPROTKB|Q5ZL01 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 Gene3D:1.10.720.30
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408
KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205
CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:AADN02009127
EMBL:AJ719933 IPI:IPI00571536 RefSeq:NP_001006450.1
UniGene:Gga.2609 SMR:Q5ZL01 Ensembl:ENSGALT00000018669
GeneID:422629 KEGG:gga:422629 InParanoid:Q5ZL01 NextBio:20825234
Uniprot:Q5ZL01
Length = 327
Score = 154 (59.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 33 EIIEFPSVIVSGVTGQITVCFQIYALFLHD--NW--QQHMGVTPTNFAVVTWSDWDCQVM 88
++ EF V ++G+T I + L + +W Q+ +G T ++ ++T WD
Sbjct: 159 KLSEF-CVGLTGITQDIVDKADTFPQVLQNVVDWMRQRELG-TKYSYCMLTDGSWDMSKF 216
Query: 89 LESECRFKNIPKPSYFNRWINLR--------VPFSKGDVRCNLKEAVELGWHGRVHCGLD 140
L +CR I PS+ +WIN+R VP ++ + L E + + + GR H GLD
Sbjct: 217 LNIQCRVSRIKHPSFAKKWINIRKSYGNFYKVPRNQTKLMIML-EKLGMSYDGRPHSGLD 275
Query: 141 DSMNIARLLAVIMQRGFKFSITKSLTTPQDITQDS 175
DS NIAR+ ++Q G + + + + Q +T S
Sbjct: 276 DSKNIARIAIRMLQDGCQLRVNEKMHAGQLMTVSS 310
>UNIPROTKB|H3BN77 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC002394 HGNC:HGNC:30541
ProteinModelPortal:H3BN77 SMR:H3BN77 Ensembl:ENST00000568805
Bgee:H3BN77 Uniprot:H3BN77
Length = 156
Score = 133 (51.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 10 QDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
Q FDY +V+DFE+TC D K H QEIIEFP+V+++ TGQI FQ Y
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAY 80
>WB|WBGene00001332 [details] [associations]
symbol:eri-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0048609 "multicellular organismal
reproductive process" evidence=IMP] [GO:0006401 "RNA catabolic
process" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP;IDA]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP;IDA] [GO:0007281 "germ cell development"
evidence=IGI;IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0005737 GO:GO:0008406
GO:GO:0002119 GO:GO:0016246 GO:GO:0003676 GO:GO:0003723
GO:GO:0006401 GO:GO:0009790 GO:GO:0048609 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0045132 GO:GO:0000175 eggNOG:COG5018
GeneTree:ENSGT00530000063205 GO:GO:0000467 EMBL:FO081716 PIR:T32575
PIR:T32576 RefSeq:NP_741292.1 RefSeq:NP_741293.1
ProteinModelPortal:O44406 SMR:O44406 IntAct:O44406 STRING:O44406
PaxDb:O44406 PRIDE:O44406 EnsemblMetazoa:T07A9.5b GeneID:176868
KEGG:cel:CELE_T07A9.5 UCSC:T07A9.5b CTD:176868 WormBase:T07A9.5a
WormBase:T07A9.5b HOGENOM:HOG000020044 InParanoid:O44406
OMA:LIDVREM NextBio:894366 Uniprot:O44406
Length = 582
Score = 107 (42.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 64 WQQ--HMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPFS------ 115
W + ++G + FA VT D ++ +C NI P F +IN++ F
Sbjct: 233 WMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLSNIRMPHMFRSFINIKKTFKEKFNGL 292
Query: 116 -KGDVRC---NLKEAVELGWHGRVHCGLDDSMNIARLLAVIMQRGFKFSITK 163
KG+ + N+ E ++L + G H GLDD+ NIA + +M+ + I +
Sbjct: 293 IKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIAAIAIQMMKLKIELRINQ 344
Score = 90 (36.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 12 FDYFVVVDFEATCDKKI-PHPQEIIEFPSVIVSGVTGQITVCFQIY 56
FDY + +DFE TC + I +P EIIE P+V++ +I F+ Y
Sbjct: 148 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTY 193
>RGD|1595859 [details] [associations]
symbol:Eri3 "ERI1 exoribonuclease family member 3" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 RGD:1595859
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 OrthoDB:EOG4ZKJMJ IPI:IPI00769247
ProteinModelPortal:D4AA56 Ensembl:ENSRNOT00000026222
UCSC:RGD:1595859 Uniprot:D4AA56
Length = 253
Score = 141 (54.7 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 3 PFLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
PF PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 137 PFPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 187
>UNIPROTKB|F1NBT2 [details] [associations]
symbol:F1NBT2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:AADN02012702
IPI:IPI00601169 Ensembl:ENSGALT00000016435 OMA:ISXNISK
Uniprot:F1NBT2
Length = 222
Score = 134 (52.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 FLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
F PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 107 FPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 156
>UNIPROTKB|I3L645 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:FP016068
Ensembl:ENSSSCT00000025016 OMA:NDGKCHW Uniprot:I3L645
Length = 110
Score = 118 (46.6 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 10 QDFDYFVVVDFEATC--DKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
Q FDY VV+DFE+TC D K QEIIEFP+V+++ TG+I F Y
Sbjct: 32 QLFDYLVVIDFESTCWNDGKCHWSQEIIEFPAVLLNTSTGEIESEFHTY 80
>UNIPROTKB|F6UGJ8 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI01011710 ProteinModelPortal:F6UGJ8 SMR:F6UGJ8
Ensembl:ENST00000457571 ArrayExpress:F6UGJ8 Bgee:F6UGJ8
Uniprot:F6UGJ8
Length = 250
Score = 134 (52.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 FLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
F PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 136 FPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 185
>UNIPROTKB|F1S331 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:FPALTEH
EMBL:CU929772 Ensembl:ENSSSCT00000004352 Uniprot:F1S331
Length = 252
Score = 134 (52.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 FLPQKLQDFDYFVVVDFEATCDKKIPHPQEIIEFPSVIVSGVTGQITVCFQIY 56
F PQ+ + YF+V+DFEATCDK HPQEIIEFP + ++G T +I F +Y
Sbjct: 138 FPPQR---YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMY 187
>UNIPROTKB|F6QUN3 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI00943355 ProteinModelPortal:F6QUN3 SMR:F6QUN3
Ensembl:ENST00000452396 ArrayExpress:F6QUN3 Bgee:F6QUN3
Uniprot:F6QUN3
Length = 176
Score = 119 (46.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 28 IPHPQEI---IEFPSVIVSGVTGQITVCFQIYALFLHDNWQQHMGVTPTNFA--VVTWSD 82
+ HPQ E +I + V GQ ++ Q+ L D W G+ N VT D
Sbjct: 73 VVHPQLTPFCTELTGIIQAMVDGQPSLQ-QV--LERVDEWMAKEGLLDPNVKSIFVTCGD 129
Query: 83 WDCQVMLESECRFKNIPKPSYFNRWINLRVPFS 115
WD +VML +C++ +P YF +WINL+ +S
Sbjct: 130 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYS 162
>WB|WBGene00000797 [details] [associations]
symbol:crn-4 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0006309 "apoptotic DNA fragmentation"
evidence=IGI;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS;IDA] [GO:0004520 "endodeoxyribonuclease activity"
evidence=IDA] [GO:0004540 "ribonuclease activity" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0000737
"DNA catabolic process, endonucleolytic" evidence=IDA] [GO:0000738
"DNA catabolic process, exonucleolytic" evidence=IDA] [GO:0006401
"RNA catabolic process" evidence=IDA] [GO:0004536
"deoxyribonuclease activity" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005622
GO:GO:0006401 GO:GO:0003697 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006309 GO:GO:0004540 GO:GO:0008408 GO:GO:0004520
EMBL:AY303578 EMBL:FO080097 PIR:T30086 RefSeq:NP_508415.1
UniGene:Cel.11543 PDB:3CG7 PDB:3CM5 PDB:3CM6 PDBsum:3CG7
PDBsum:3CM5 PDBsum:3CM6 ProteinModelPortal:Q10905 SMR:Q10905
STRING:Q10905 PaxDb:Q10905 EnsemblMetazoa:AH9.2 GeneID:180536
KEGG:cel:CELE_AH9.2 UCSC:AH9.2 CTD:180536 WormBase:AH9.2
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000016569
InParanoid:Q10905 OMA:DLWRIAQ EvolutionaryTrace:Q10905
NextBio:909784 GO:GO:0000738 Uniprot:Q10905
Length = 298
Score = 101 (40.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 55 IYALFLHDNWQQHMGVTPTNFAVVTWSDWDCQVMLESECRFKNIPKPSYFNRWINLRVPF 114
+Y F W +G+ FA V S D + + + + NI P++F ++INL F
Sbjct: 88 VYEQF--QQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIF 145
Query: 115 SKGDVRCNLKE---AVELG----WH-----GRVHCGLDDSMNIARLLAVIMQRGFKFSIT 162
+ R KE +G ++ GR H +DD +NIA +L ++ G K ++
Sbjct: 146 TNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCLNIATILQRMINMGAKVTVN 205
Query: 163 KSLT 166
+ LT
Sbjct: 206 ELLT 209
Score = 55 (24.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 12 FDYFVVVDFEATCDK-KIPHPQEIIEFPSV 40
FD +++DFE T D +P E+I+F V
Sbjct: 8 FDTLLILDFETTSDAANQDYPCEVIQFAIV 37
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.471 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 254 0.00084 114 3 11 22 0.37 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 623 (66 KB)
Total size of DFA: 246 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.37u 0.16s 20.53t Elapsed: 00:00:01
Total cpu time: 20.37u 0.16s 20.53t Elapsed: 00:00:01
Start: Thu May 9 22:14:11 2013 End: Thu May 9 22:14:12 2013