BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036633
(550 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449439307|ref|XP_004137427.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
gi|449486952|ref|XP_004157452.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 908
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 233/490 (47%), Gaps = 79/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 362 HGVRIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 416
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 417 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPL--LMKYRKEKERIDEIR 474
Query: 138 -----------CVHDAKRVKDYSKILD----------QIDARVHGKFKEKL----AVDVE 172
+ +A+R D ++ D AR+ G E L V E
Sbjct: 475 RLKQRREELQIALQEAERRYDLARAADLRYGAIQEVESAIARIEGNTDENLMLTETVGPE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
++AEV S+ TGIP + +ER + + RL KRV GQN A+D + EA+ + +A GL
Sbjct: 535 QVAEVVSRWTGIPVTRLGQNDKERLVGLADRLHKRVVGQNQAVDAVAEAVLRSRA---GL 591
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 592 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 649 APPGYVGHEEGGQLTEAVRRRPYSVILFDEVEKAHIAVFNTLLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVY-----EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDL 394
D NT+IIMTS+L E + + + RV + F+P LL LD++VV D
Sbjct: 707 VDFRNTVIIMTSNLGAEHLLAGLMGKCTMQVARDRVMQEVRKHFRPELLNRLDEIVVFD- 765
Query: 395 AVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHI-ASNAARKYGQNG 448
P L RL +++ A +R V + + +AL ++ A + YG
Sbjct: 766 --PLSHEQLRKVARLQMKDVAARLAER------GVALAVTDAALDYVLAESYDPVYG--A 815
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 816 RPIRRWLEKR 825
>gi|351725607|ref|NP_001238122.1| heat shock protein [Glycine max]
gi|530207|gb|AAA66338.1| heat shock protein [Glycine max]
Length = 911
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 236/485 (48%), Gaps = 69/485 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 363 HGVRIQDRALVMAAQLSN--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 417
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ + R+
Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRL 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDARVH---GKFKEKL----AVDVEEI 174
+ + ++ + + +A+R D ++ D +++ + G +E L V E+I
Sbjct: 478 KKKREELLFALQEAERRYDLARAADLRYGAIQEVETAIQQLEGSTEENLMLTETVGPEQI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL RV GQ+ A++ + EA+ + +A GL
Sbjct: 538 AEVVSRWTGIPVTRLGQNEKERLIGLGDRLHSRVVGQDQAVNAVAEAVLRSRA---GLGR 594
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ DN+N L+ DM Y E S+ +
Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLF---DNENQLVRIDMSEYMEQHSVSRLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA++S+ N LL++L D R D
Sbjct: 652 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVL--DDGRLTDGQGRTVD 709
Query: 342 LTNTLIIMTSDLKDEQVY-----EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
NT+IIMTS+L E + + + RV + F+P LL LD++VV D
Sbjct: 710 FRNTVIIMTSNLGAEHLLSGLSGKCTMQVARDRVMQEVRRQFRPELLNRLDEIVVFDPLS 769
Query: 397 --PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQNGEGLKR 453
L RL +++ A + K + + + +AL +I S + YG ++R
Sbjct: 770 HDQLRKVARLQMKDVASRLAE------KGIALAVTDAALDYILSESYDPVYG--ARPIRR 821
Query: 454 WMDQR 458
W++++
Sbjct: 822 WLEKK 826
>gi|297733886|emb|CBI15133.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 236/485 (48%), Gaps = 69/485 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 333 HGVRIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 387
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 388 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 447
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDARV---HGKFKEKL----AVDVEEI 174
+ + ++ + + +A+R D ++ D +++A + G E + V E+I
Sbjct: 448 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTETVGPEQI 507
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ+ A+ + EA+ + +A GL
Sbjct: 508 AEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRA---GLGR 564
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 565 PQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGAP 621
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA+ ++ N LL++L D R D
Sbjct: 622 PGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVL--DDGRLTDGQGRTVD 679
Query: 342 LTNTLIIMTSDLKDEQ-----VYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
TNT+IIMTS+L E V + + RV + F+P LL LD++VV D
Sbjct: 680 FTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLS 739
Query: 397 --PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGEGLKR 453
L RL +++ A +R + + + +AL V +A + YG ++R
Sbjct: 740 HDQLRKVARLQMKDVASRLAER------GIALAVTDAALDVVLAESYDPVYG--ARPIRR 791
Query: 454 WMDQR 458
W++++
Sbjct: 792 WLEKK 796
>gi|59805048|gb|AAX08108.1| heat shock protein 101 [Vitis vinifera]
Length = 911
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 236/485 (48%), Gaps = 69/485 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 363 HGVRIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 417
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDARV---HGKFKEKL----AVDVEEI 174
+ + ++ + + +A+R D ++ D +++A + G E + V E+I
Sbjct: 478 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTETVGPEQI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ+ A+ + EA+ + +A GL
Sbjct: 538 AEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRA---GLGR 594
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA+ ++ N LL++L D R D
Sbjct: 652 PGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVL--DDGRLTDGQGRTVD 709
Query: 342 LTNTLIIMTSDLKDEQ-----VYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
TNT+IIMTS+L E V + + RV + F+P LL LD++VV D
Sbjct: 710 FTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLS 769
Query: 397 --PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGEGLKR 453
L RL +++ A +R + + + +AL V +A + YG ++R
Sbjct: 770 HDQLRKVARLQMKDVASRLAER------GIALAVTDAALDVVLAESYDPVYG--ARPIRR 821
Query: 454 WMDQR 458
W++++
Sbjct: 822 WLEKK 826
>gi|225457237|ref|XP_002284179.1| PREDICTED: chaperone protein ClpB1 [Vitis vinifera]
Length = 911
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 236/485 (48%), Gaps = 69/485 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 363 HGVRIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 417
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDARV---HGKFKEKL----AVDVEEI 174
+ + ++ + + +A+R D ++ D +++A + G E + V E+I
Sbjct: 478 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTETVGPEQI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ+ A+ + EA+ + +A GL
Sbjct: 538 AEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRA---GLGR 594
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA+ ++ N LL++L D R D
Sbjct: 652 PGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVL--DDGRLTDGQGRTVD 709
Query: 342 LTNTLIIMTSDLKDEQ-----VYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
TNT+IIMTS+L E V + + RV + F+P LL LD++VV D
Sbjct: 710 FTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLS 769
Query: 397 --PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGEGLKR 453
L RL +++ A +R + + + +AL V +A + YG ++R
Sbjct: 770 HDQLRKVARLQMKDVASRLAER------GIALAVTDAALDVVLAESYDPVYG--ARPIRR 821
Query: 454 WMDQR 458
W++++
Sbjct: 822 WLEKK 826
>gi|110623253|emb|CAI94865.2| heat shock protein 101 [Triticum durum]
Length = 917
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 237/491 (48%), Gaps = 81/491 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD A+ +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 365 HGVRIQDRAIVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 419
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 420 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 477
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ G+ E L V E
Sbjct: 478 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPE 537
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL RV GQ +A++ + EA+ + +A GL
Sbjct: 538 QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRA---GL 594
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 595 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 652 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 709
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++VV D
Sbjct: 710 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEIVVFD 768
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
P L RL +R+ A +R V + + +AL I S A YG
Sbjct: 769 ---PLSHEQLRKVARLQMRDVAVRLAER------GVALAVTDAALDVILSLAYDPVYG-- 817
Query: 448 GEGLKRWMDQR 458
++RW+++R
Sbjct: 818 ARPIRRWIEKR 828
>gi|254952729|gb|ACT97165.1| heat shock protein [Vitis labrusca x Vitis vinifera]
Length = 911
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 236/485 (48%), Gaps = 69/485 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 363 HGVRIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 417
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDARV---HGKFKEKL----AVDVEEI 174
+ + ++ + + +A+R D ++ D +++A + G E + V E+I
Sbjct: 478 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTETVGPEQI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ+ A+ + EA+ + ++ GL
Sbjct: 538 AEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLR---SRVGLGR 594
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA+ ++ N LL++L D R D
Sbjct: 652 PGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVL--DDGRLTDGQGRTVD 709
Query: 342 LTNTLIIMTSDLKDEQ-----VYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
TNT+IIMTS+L E V + + RV + F+P LL LD++VV D
Sbjct: 710 FTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLS 769
Query: 397 --PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGEGLKR 453
L RL +++ A +R + + + +AL V +A + YG ++R
Sbjct: 770 HDQLRKVARLQMKDVASRLAER------GIALAVTDAALDVVLAESYDPVYG--ARPIRR 821
Query: 454 WMDQR 458
W++++
Sbjct: 822 WLEKK 826
>gi|147811710|emb|CAN72669.1| hypothetical protein VITISV_012280 [Vitis vinifera]
Length = 906
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 235/485 (48%), Gaps = 74/485 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ + ++ ID++ + C N R D +E+D
Sbjct: 363 HGVRIQDRALVVAAQLSSR-------YITDKAIDLVDEA---CANVRVQLDSQPEEIDNL 412
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 413 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 472
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDARV---HGKFKEKL----AVDVEEI 174
+ + ++ + + +A+R D ++ D +++A + G E + V E+I
Sbjct: 473 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTETVGPEQI 532
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ+ A+ + EA+ + +A GL
Sbjct: 533 AEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRA---GLGR 589
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 590 PQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGAP 646
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA+ ++ N LL++L D R D
Sbjct: 647 PGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVL--DDGRLTDGQGRTVD 704
Query: 342 LTNTLIIMTSDLKDEQ-----VYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
TNT+IIMTS+L E V + + RV + F+P LL LD++VV D
Sbjct: 705 FTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLS 764
Query: 397 --PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGEGLKR 453
L RL +++ A +R + + + +AL V +A + YG ++R
Sbjct: 765 HDQLRKVARLQMKDVASRLAER------GIALAVTDAALDVVLAESYDPVYG--ARPIRR 816
Query: 454 WMDQR 458
W++++
Sbjct: 817 WLEKK 821
>gi|4558484|gb|AAD22629.1|AF097363_1 heat shock protein 101 [Triticum aestivum]
Length = 918
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 237/491 (48%), Gaps = 81/491 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD A+ +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 365 HGVRIQDRAIVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 419
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 420 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 477
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ G+ E L V E
Sbjct: 478 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPE 537
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL RV GQ +A++ + EA+ + +A GL
Sbjct: 538 QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRA---GL 594
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 595 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 652 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 709
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++VV D
Sbjct: 710 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEIVVFD 768
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
P L RL +++ A +R V + + +AL I S A YG
Sbjct: 769 ---PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLAYDPVYG-- 817
Query: 448 GEGLKRWMDQR 458
++RW+++R
Sbjct: 818 ARPIRRWIEKR 828
>gi|326531902|dbj|BAK01327.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 916
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 237/491 (48%), Gaps = 81/491 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD A+ +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRAIVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ G+ E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++VV D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVVFD 767
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
P L RL +++ A +R V + + +AL I S A YG
Sbjct: 768 ---PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLAYDPVYG-- 816
Query: 448 GEGLKRWMDQR 458
++RW+++R
Sbjct: 817 ARPIRRWIEKR 827
>gi|357132932|ref|XP_003568082.1| PREDICTED: chaperone protein ClpB1-like [Brachypodium distachyon]
Length = 912
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 233/490 (47%), Gaps = 79/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD A+ +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRAIVVAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ G+ E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALMEIDAAIAKLEGETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++VV D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEIVVFD 767
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG 448
P L RL +++ A +R I T A + + + A
Sbjct: 768 ---PLSHEQLRKVARLQMKDVAVRLAERG-------IALAVTDAALDVILSLAYDPVYGA 817
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 818 RPIRRWIEKR 827
>gi|357136409|ref|XP_003569797.1| PREDICTED: chaperone protein ClpB1-like isoform 2 [Brachypodium
distachyon]
Length = 920
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 211/425 (49%), Gaps = 68/425 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLHPL--QMKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +ID A++ G+ E L V +
Sbjct: 477 NLKQRREELQFTLQEAERRMDLARVADLRYGALQEIDVAIAKLEGETGENLMLTETVGPD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ++A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNEKERLVGLDDRLHQRVVGQHEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVML-----TATYGRVNEVTGSL------FKPSLLKLLDK 388
D NT+IIMTS+L E + M+ A + EV S+ F+P LL LD+
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMMGNSMKVARDMVMQEVCASITVVRRHFRPELLNRLDE 768
Query: 389 LVVID 393
+V+ D
Sbjct: 769 IVIFD 773
>gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein [Triticum aestivum]
Length = 918
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 237/491 (48%), Gaps = 81/491 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD A+ +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 365 HGVRIQDRAIVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 419
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 420 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 477
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ G+ E L V E
Sbjct: 478 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPE 537
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL RV GQ +A++ + EA+ + +A GL
Sbjct: 538 QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRA---GL 594
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 595 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 652 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 709
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 710 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEMVIFD 768
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
P L RL +++ A +R V + + +AL I S A YG
Sbjct: 769 ---PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLAYDPVYG-- 817
Query: 448 GEGLKRWMDQR 458
++RW+++R
Sbjct: 818 ARPIRRWIEKR 828
>gi|224130056|ref|XP_002328643.1| predicted protein [Populus trichocarpa]
gi|222838819|gb|EEE77170.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 238/488 (48%), Gaps = 74/488 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 363 HGVRIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDSL 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFW---LRQIDNELKDAFFELVSFVK---------L 126
+ + VE L KE D +S++ ++++D+ L+D L+ K
Sbjct: 418 ERKRMQLEVELHALEKE-KDKASKARLAEVVKELDD-LRDKLQPLLMKYKKEKERIDEIR 475
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDA---RVHGKFKEK-----LAVDV 171
R++ + ++ + +A+R D +++ L++++A R+ G ++ V
Sbjct: 476 RLKQKREEIHFSIQEAERRYDLARVADLRYGALEEVEAAIARLEGSTTDENLMLTETVGP 535
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E IAEV S+ TGIP + +ER + + RL RV GQ+ A++ + EA+ + +A G
Sbjct: 536 EHIAEVVSRWTGIPVTRLGQNEKERLIGLADRLHHRVVGQDQAVNAVAEAVLRSRA---G 592
Query: 232 LSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L +Q G FLF GP GK ELAK +A +L+ DN+N L+ DM Y E S+
Sbjct: 593 LGRPQQPTGSFLFLGPTGVGKTELAKTLAEQLF---DNENQLVRIDMSEYMEQHSVSRLI 649
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVLFD++EKA+ S+ N LL++L D R
Sbjct: 650 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVL--DDGRLTDGQGR 707
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVML-----TATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + +L RV + F+P LL LD++VV D
Sbjct: 708 TVDFRNTVIIMTSNLGAEHLLSGLLGKCSMQVARDRVMQEVRKQFRPELLNRLDEIVVFD 767
Query: 394 LAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHI-ASNAARKYGQNGEG 450
L RL +++ A +R + + + +AL +I A + YG
Sbjct: 768 PLSHDQLRKVARLQMKDVASRLAER------GIALAVTDAALDYILAESYDPVYG--ARP 819
Query: 451 LKRWMDQR 458
++RW++++
Sbjct: 820 IRRWLERK 827
>gi|110623251|emb|CAI94864.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 237/491 (48%), Gaps = 81/491 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD A+ +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 365 HGVRIQDRAIVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 419
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 420 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 477
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ G+ E L V E
Sbjct: 478 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPE 537
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL RV GQ +A++ + EA+ + +A GL
Sbjct: 538 QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRA---GL 594
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 595 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 652 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 709
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 710 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEMVIFD 768
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
P L RL +++ A +R V + + +AL I S A YG
Sbjct: 769 ---PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLAYDPVYG-- 817
Query: 448 GEGLKRWMDQR 458
++RW+++R
Sbjct: 818 ARPIRRWIEKR 828
>gi|357136407|ref|XP_003569796.1| PREDICTED: chaperone protein ClpB1-like isoform 1 [Brachypodium
distachyon]
Length = 913
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 208/418 (49%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLHPLQ--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +ID A++ G+ E L V +
Sbjct: 477 NLKQRREELQFTLQEAERRMDLARVADLRYGALQEIDVAIAKLEGETGENLMLTETVGPD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ++A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNEKERLVGLDDRLHQRVVGQHEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ + V + F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMMGNSMKVARDMVMQEVRRHFRPELLNRLDEIVIFD 766
>gi|337288558|ref|YP_004628030.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium sp. OPB45]
gi|334902296|gb|AEH23102.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium geofontis
OPF15]
Length = 872
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 21/239 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IA++ SK TGIP E+ +R++ RLK+RV GQ+ AI I AL + +A
Sbjct: 534 VDAEDIAQIVSKWTGIPVHRLLESEREKLLRIEERLKERVVGQDHAISAIANALRRARAG 593
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K RR +G FLF GP GK ELAKA+A ++D D +I DM Y E S+
Sbjct: 594 LK--DPRRPIGSFLFIGPTGVGKTELAKALAEFMFDTEDA---MIRIDMTEYMEKHSVSR 648
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+LFD+IEKA+ + N+LL+IL D R
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQIL--DDGRLTDGK 706
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLT--ATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS++ ++ L+ RV E+ S F+P L +D+++V +
Sbjct: 707 GRTVDFKNTIIIMTSNVGSFYFQDLSLSRKEVENRVFELLKSTFRPEFLNRIDEIIVFN 765
>gi|255547217|ref|XP_002514666.1| chaperone clpb, putative [Ricinus communis]
gi|223546270|gb|EEF47772.1| chaperone clpb, putative [Ricinus communis]
Length = 912
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 210/420 (50%), Gaps = 63/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++I D AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 362 HGVRILDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 416
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSR---SFWLRQIDNELKDAFFELVSFVK---------L 126
+ + VE+ L KE D +S+ S ++++D+ L+D L+ K
Sbjct: 417 ERKKIQLEVEHHALEKE-KDKASKARLSEVVKELDD-LRDKLQPLIMKYKKEKERIDEIR 474
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDA---RVHGKFKEK-----LAVDV 171
R++ + ++ + +A+R D +++ L+++DA R+ G ++ V
Sbjct: 475 RLKQKREEIQFAIQEAERRYDLARVADLKYGALEEVDAAIARLEGSSTDENLMLTETVKP 534
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E IAEV S+ TGIP + +ER + + RL +RV GQ+ A+ + EA+ + +A G
Sbjct: 535 EHIAEVVSRWTGIPVTRLGQNEKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRA---G 591
Query: 232 LSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L +Q G FLF GP GK ELAKA+A +L+ D++N ++ DM Y E S+
Sbjct: 592 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENQMVRIDMSEYMEQHSVSRLI 648
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVLFD++EKA+ S+ N LL++L D R
Sbjct: 649 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHLSVFNTLLQVL--DDGRLTDGQGR 706
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVM-----LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + + + A RV F+P LL LD++VV D
Sbjct: 707 TVDFRNTVIIMTSNLGAEHLLSGLTGKTSIEAARDRVMLEVRKHFRPELLNRLDEIVVFD 766
>gi|223975969|gb|ACN32172.1| unknown [Zea mays]
gi|413946195|gb|AFW78844.1| heat-shock protein 101 [Zea mays]
Length = 912
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 232/490 (47%), Gaps = 79/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ + E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVIFD 767
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG 448
P L RL +++ A +R I T A + I + +
Sbjct: 768 ---PLSHEQLRKVARLQMKDVAVRLAERG-------IALAVTDAALDIILSLSYDPVYGA 817
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 818 RPIRRWIEKR 827
>gi|162458166|ref|NP_001104935.1| heat-shock protein 101 [Zea mays]
gi|4584957|gb|AAD25223.1|AF077337_1 heat shock protein 101 [Zea mays]
gi|4928488|gb|AAD33606.1|AF133840_1 heat shock protein HSP101 [Zea mays]
Length = 912
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 232/490 (47%), Gaps = 79/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ + E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVIFD 767
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG 448
P L RL +++ A +R I T A + I + +
Sbjct: 768 ---PLSHEQLRKVARLQMKDVAVRLAERG-------IALAVTDAALDIILSLSYDPVYGA 817
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 818 RPIRRWIEKR 827
>gi|4590326|gb|AAD26530.1|AF083327_1 101 kDa heat shock protein [Zea mays]
Length = 582
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 231/487 (47%), Gaps = 73/487 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 34 HGVRIQDRALVVAAQLS--ARYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 88
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 89 ERKRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLT--MKYRKEKERIDEIR 146
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ + E L V E
Sbjct: 147 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLESETGENLMLTETVGPE 206
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 207 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRA---GL 263
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 264 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 320
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 321 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 378
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 379 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVIFD 437
Query: 394 LAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNGEGL 451
L RL +++ A +R I T A + I + + +
Sbjct: 438 PLSHEQLRKVARLQMKDVAVRLAERG-------IALAVTDAALDIILSLSYDPVYGARPI 490
Query: 452 KRWMDQR 458
+RW+++R
Sbjct: 491 RRWIEKR 497
>gi|161502241|ref|YP_001569353.1| protein disaggregation chaperone [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160863588|gb|ABX20211.1| hypothetical protein SARI_00266 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 861
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 200/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V G F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVGHNFRPEFINRIDEVVV 766
>gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein [Nicotiana tabacum]
Length = 909
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 205/418 (49%), Gaps = 60/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 363 HGVKIQDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 417
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 418 ERKRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRL 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVEEI 174
+ + D+ + + +A+R D ++ D +++ A + E V ++I
Sbjct: 478 KQKRDELIYALQEAERRYDLARAADLRYGAIQEVETAIANLESTSAESTMLTETVGPDQI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP S +E+ + + RL +RV GQ+ A+ + EA+ + +A GL
Sbjct: 538 AEVVSRWTGIPVSRLGQNEKEKLIGLGDRLHQRVVGQDHAVRAVAEAVLRSRA---GLGR 594
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+D+ D +I DM Y E S+ +
Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---DKLMIRIDMSEYMEQHSVSRLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVLFD++EKA+ ++ N LL++L D R D
Sbjct: 652 PGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQVL--DDGRLTDGQGRTVD 709
Query: 342 LTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
TN++IIMTS+L E + M TA + EV FKP LL LD++VV D
Sbjct: 710 FTNSVIIMTSNLGAEYLLSGLMGKCTMETAREMVMQEVRKQ-FKPELLNRLDEIVVFD 766
>gi|242091131|ref|XP_002441398.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor]
gi|241946683|gb|EES19828.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor]
Length = 913
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 232/487 (47%), Gaps = 73/487 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +++ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ + E L V E
Sbjct: 477 KLKQRREELQFSLQEAERRMDLARVADLKYGALQEIDAAISKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVIFD 767
Query: 394 LAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNGEGL 451
L RL +++ A +R I T A + I + + +
Sbjct: 768 PLSHEQLRKVARLQMKDVAVRLAERG-------IALAVTDAALDIILSLSYDPVYGARPI 820
Query: 452 KRWMDQR 458
+RW+++R
Sbjct: 821 RRWIEKR 827
>gi|449441089|ref|XP_004138316.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 752
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 167/318 (52%), Gaps = 32/318 (10%)
Query: 158 RVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDV 217
R HG F EK V EEIA+ S+ TG+P S + +E M + GRLKKRV GQN+A+D
Sbjct: 363 RKHG-FIEKDTVGPEEIADEVSRWTGVPVSRLTGEEKEWVMGLAGRLKKRVVGQNEAVDS 421
Query: 218 IFEALTKPKAAKKGLSSRRQL-GLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFD 276
+ EA+ + +A GL+ Q G FLF GP+ GK ELAK +A+EL+ +++N ++ D
Sbjct: 422 VAEAVMRFRA---GLALPNQPNGSFLFLGPSGVGKTELAKGLAHELF---NDENRMVRID 475
Query: 277 MGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKI 324
M Y E S+ S L VK+RPY VVL D++EKA+ +LN+LL++
Sbjct: 476 MSEYMEKHSVSRLIGSPPGYVGYHEGGQLTEPVKRRPYCVVLLDEVEKAHVDVLNILLQV 535
Query: 325 LKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYE---VMLTATYGRVNEVTGSLFKPS 381
L D R + D NT+IIMTS+L ++ + RV + FKP
Sbjct: 536 L--DDGRLTDGQGSTVDFRNTVIIMTSNLGAGHLFSEKYCPMQVARERVIQKVKEHFKPE 593
Query: 382 LLKLLDKLVVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAA 441
+ LD++++ PL + + + ++ RR ++ K + + + SAL + +
Sbjct: 594 FVNRLDEILIFR---PLSKIQQRRVTKSMMKDVARRLSE-KGIAMAVTKSALDFVLDQSF 649
Query: 442 RK-YGQNGEGLKRWMDQR 458
YG ++RW++++
Sbjct: 650 DPVYG--ARPIRRWLEKK 665
>gi|410611339|ref|ZP_11322438.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
gi|410169190|dbj|GAC36327.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
Length = 864
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 203/414 (49%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++Q R A +L ++ ID++ + R D +E+DK
Sbjct: 361 HGVAITDSAIVAATLLSQ--RYIADRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE----------LKDAFFELVSFVKLRMQV- 130
L + +E E L KE D S + L +D E LK+ + ++V+ QV
Sbjct: 419 LIQLKIEREALKKETDDASKKR--LNNLDEEVNVLELEFSDLKETWISEKAYVQGETQVK 476
Query: 131 -EYDDFVSCVHDAKRVKDYSKI-------LDQIDARV----HGKFKE----KLAVDVEEI 174
E + + A+R D +++ + +++A++ + KE + V EEI
Sbjct: 477 EELEQARRELEAARRASDLTRMSEIQYGRIPELEAKLIVVSQNQTKEMTLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S + E+ ++++ L RV GQ +AI + +++ ++++ GL+
Sbjct: 537 AEVVSKWTGIPVSKMLSGEREKLLKMEEALHSRVIGQEEAITAVSDSI---RSSRAGLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+R G FLF GP GK EL KA+A L+D D+ ++ DM + E S+ +
Sbjct: 594 PQRPNGSFLFLGPTGVGKTELTKALAEFLFDTEDS---IVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+VVL D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYAVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L + +V Y RV EV G F+P + LD++VV
Sbjct: 709 FRNTVIVMTSNLGSHLILDVAGEENYEEIKKRVLEVVGQHFRPEFINRLDEIVV 762
>gi|418514455|ref|ZP_13080660.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366079129|gb|EHN43118.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 857
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVDAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|110623255|emb|CAI94866.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 238/489 (48%), Gaps = 78/489 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVIAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPL--QMKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D ++DA ++ G+ E L V +
Sbjct: 477 SLKQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEGETGENLMLTETVGPD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVLFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVVLFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVVIDLA 395
D NT+IIMTS+L E + M+ ++ ++ F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGSSMKVARDLVMQEVRRHFRPELLNRLDEIVIFD-- 766
Query: 396 VP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGE 449
P L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 767 -PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLSYDPVYG--AR 817
Query: 450 GLKRWMDQR 458
++RW+++R
Sbjct: 818 PIRRWIEKR 826
>gi|340812276|gb|AEK76075.1| Hsp101 [Saccharum hybrid cultivar SP80-3280]
Length = 912
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 232/490 (47%), Gaps = 79/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +++ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ + E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A++ + EA+ + KA GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSKA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQSTGSFLFLGPTGVGKTELAKAFAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVIFD 767
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG 448
P L RL +++ A +R I T A + I + +
Sbjct: 768 ---PLSHEQLRKVARLQMKDVAVRLAERG-------IALAVTDAALDIILSLSYDPVYGA 817
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 818 RPIRRWIEKR 827
>gi|325921790|ref|ZP_08183609.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
gi|325547722|gb|EGD18757.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
Length = 802
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 204/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 302 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 360 LIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQ 419
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 420 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 478 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 535 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVSRLIGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA++ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 650 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 706
>gi|417392770|ref|ZP_12155491.1| ClpB protein [Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353610779|gb|EHC63640.1| ClpB protein [Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 547
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 51 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 108
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 109 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 166
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 167 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 226
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A+D + A+ + +A GLS
Sbjct: 227 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVDAVSNAIRRSRA---GLSD 283
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+ +
Sbjct: 284 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 340
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 341 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 398
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 399 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 452
>gi|417541083|ref|ZP_12192911.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353661451|gb|EHD00773.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 820
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 324 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 381
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 382 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 439
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 440 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 499
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 500 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 556
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 557 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 613
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 614 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 671
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 672 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 725
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 202/423 (47%), Gaps = 70/423 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A++++ R + L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVRITDPALVAAAQLSH--RYISDRNLPDKAIDLVDEAASRIKMEIDSKPEELDELERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-LRQIDNELKDAFFELVSFVKL---------RMQVE 131
L + +E L KE + S + L EL+ + EL K ++Q E
Sbjct: 419 LIQLNIEKVALAKEKDEASRKRLENLESQIAELQRKYQELEEIWKSEKLAIEGTSQIQKE 478
Query: 132 YDDFVSCVHDAKRVKDYSKILD----QIDARVHGKFKE----------------KLAVDV 171
D + +A+R D ++ QI A + K +E + V
Sbjct: 479 LDRLRVELDNARRANDLERMAQIQYGQIPA-LEAKLREAEKQEADGQRKAPTLLRTEVTE 537
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV S+ TGIP S +E+ ++++ RL+ RV GQ++A+ + A+ + +A G
Sbjct: 538 EEIAEVISRWTGIPVSKMLEGEKEKLLKMEERLRARVVGQDEAVTAVANAIRRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L+ RR +G FLF GP GK EL KA+A L+D+ D H++ DM + E S+
Sbjct: 595 LADPRRPIGSFLFLGPTGVGKTELTKALAEFLFDSED---HMVRIDMSEFMEKHSVARLI 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPEVFNILLQVL--DDGRLTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTG----------SLFKPSLLKLLDK 388
D NT+I+MTS+L +++ E YGR+ +V G F+P L +D+
Sbjct: 710 TVDFRNTVIVMTSNLGSDRIQE------YGRLGDVEGMRGAVMEVVQGHFRPEFLNRIDE 763
Query: 389 LVV 391
LV+
Sbjct: 764 LVI 766
>gi|378446075|ref|YP_005233707.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|261247854|emb|CBG25683.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
Length = 857
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMLESEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|213424878|ref|ZP_03357628.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|417424063|ref|ZP_12160358.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353617828|gb|EHC68696.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 798
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 302 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 360 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 417
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 418 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 478 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 535 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 650 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 703
>gi|16761514|ref|NP_457131.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16765976|ref|NP_461591.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142985|ref|NP_806327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|167992437|ref|ZP_02573535.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244680|ref|ZP_02669612.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194448814|ref|YP_002046666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265769|ref|ZP_03165843.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|213051813|ref|ZP_03344691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649749|ref|ZP_03379802.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850142|ref|ZP_03381040.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289824160|ref|ZP_06543755.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|374981290|ref|ZP_09722618.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378451422|ref|YP_005238782.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700559|ref|YP_005182516.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378960787|ref|YP_005218273.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378990038|ref|YP_005253202.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701895|ref|YP_005243623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383497334|ref|YP_005398023.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386592406|ref|YP_006088806.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|419728971|ref|ZP_14255933.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734207|ref|ZP_14261101.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419739788|ref|ZP_14266531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419745026|ref|ZP_14271670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419749085|ref|ZP_14275574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421569097|ref|ZP_16014803.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421576391|ref|ZP_16021991.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580578|ref|ZP_16026133.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421585217|ref|ZP_16030718.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422029085|ref|ZP_16375372.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422034033|ref|ZP_16380081.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427559032|ref|ZP_18930585.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427577459|ref|ZP_18935334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427580449|ref|ZP_18935833.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427614308|ref|ZP_18942999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427647668|ref|ZP_18949985.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427659054|ref|ZP_18954643.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427664422|ref|ZP_18959627.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427683412|ref|ZP_18964451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427802802|ref|ZP_18970120.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|54035784|sp|Q7AMH5.1|CLPB_SALTI RecName: Full=Chaperone protein ClpB
gi|54035786|sp|Q7CQ01.1|CLPB_SALTY RecName: Full=Chaperone protein ClpB
gi|25289914|pir||AI0831 ClpB protein (heat shock protein f84.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421207|gb|AAL21550.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16503815|emb|CAD05840.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138617|gb|AAO70187.1| ClpB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|194407118|gb|ACF67337.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197244024|gb|EDY26644.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205329269|gb|EDZ16033.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336469|gb|EDZ23233.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|267994801|gb|ACY89686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159207|emb|CBW18722.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|321223454|gb|EFX48519.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323130994|gb|ADX18424.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332989585|gb|AEF08568.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|374354659|gb|AEZ46420.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380464155|gb|AFD59558.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381297674|gb|EIC38761.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381298111|gb|EIC39193.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381298283|gb|EIC39363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306782|gb|EIC47652.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381312527|gb|EIC53325.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383799450|gb|AFH46532.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402518796|gb|EJW26167.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402519783|gb|EJW27143.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402528382|gb|EJW35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402530399|gb|EJW37619.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414010482|gb|EKS94492.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414010674|gb|EKS94670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414011341|gb|EKS95305.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414025628|gb|EKT08946.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035015|gb|EKT17919.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414038868|gb|EKT21570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414039633|gb|EKT22303.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414040024|gb|EKT22662.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414044093|gb|EKT26555.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414053652|gb|EKT35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414055415|gb|EKT37309.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 857
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|297842179|ref|XP_002888971.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata]
gi|297334812|gb|EFH65230.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata]
Length = 911
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 232/490 (47%), Gaps = 78/490 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 362 HGVRIQDRALINAAQLSA--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 416
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + +E L +E D +R +R+ ++L+D L + R+
Sbjct: 417 ERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRL 476
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD----------QIDARVHGKFKEKLA-----VDVEE 173
+ + ++ + + +A+R D ++ D A++ G E+ V E
Sbjct: 477 KQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEH 536
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + +ER + + RL KRV GQN A++ + EA+ + +A GL
Sbjct: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRA---GLG 593
Query: 234 SRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 594 RPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGA 650
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY V+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 PPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVN-EVTGSL--------FKPSLLKLLDKLVV 391
D N++IIMTS+L E +L+ G+V EV F+P LL LD++VV
Sbjct: 709 DFRNSVIIMTSNLGAEH----LLSGLTGKVTMEVARECVMREVRKHFRPELLNRLDEIVV 764
Query: 392 IDLAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHI-ASNAARKYGQNG 448
D L RL +++ A +R V + + +AL +I A + YG
Sbjct: 765 FDPLSHDQLRKVARLQMKDVAVRLAER------GVALAVTDAALDYILAESYDPVYG--A 816
Query: 449 EGLKRWMDQR 458
++RWM+++
Sbjct: 817 RPIRRWMEKK 826
>gi|157310135|emb|CAJ31809.1| 101 kDa heat shock protein [Aegilops umbellulata]
Length = 563
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 236/490 (48%), Gaps = 80/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 14 HGVRIQDRALVIAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDGQPEEIDNL 68
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 69 ERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPL--QMKYRKEKERIDEIR 126
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D ++DA ++ G+ E L V +
Sbjct: 127 SLKQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEGETGENLMLTETVGPD 186
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 187 QIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GL 243
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+
Sbjct: 244 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRIDMSEYMEQHSVARLIG 300
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 301 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 358
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E +L G +V L F+P LL LD++V+
Sbjct: 359 VDFRNTVIIMTSNLGAEH----LLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEIVI 414
Query: 392 IDLAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNG 448
D L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 415 FDPLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLSYDPVYG--A 466
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 467 RPIRRWIEKR 476
>gi|378985221|ref|YP_005248377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|312913650|dbj|BAJ37624.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
Length = 857
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|21243921|ref|NP_643503.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citri str. 306]
gi|21109529|gb|AAM38039.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citri str. 306]
Length = 871
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 203/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 371 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 428
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 429 LIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQ 488
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 489 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEI 546
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 547 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 603
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 604 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 660
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 661 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 718
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 719 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 775
>gi|110623257|emb|CAI94867.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 240/495 (48%), Gaps = 82/495 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVIAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFEL-VSFVK--------LRM 128
+ + VE L KE D +R +R+ ++L+D L + + K R+
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEIRRL 478
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVEEI 174
+ ++ + +A+R D +++ D ++DA ++ G+ E L V ++I
Sbjct: 479 KQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEGETGENLMLTETVGPDQI 538
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 539 AEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GLGR 595
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+ +
Sbjct: 596 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDH---ENLLVRIDMSEYMEQHSVARLIGAP 652
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+LFD++EKA+ ++ N LL++L D R D
Sbjct: 653 PGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRTVD 710
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVVID 393
NT+IIMTS+L E +L G +V L F+P LL LD++V+ D
Sbjct: 711 FRNTVIIMTSNLGAEH----LLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFD 766
Query: 394 LAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQN 447
P L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 767 ---PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLSYDPVYG-- 815
Query: 448 GEGLKRWMDQRPSAD 462
++RW+++R A+
Sbjct: 816 ARPIRRWIEKRIVAE 830
>gi|333375879|ref|ZP_08467677.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
gi|332969337|gb|EGK08362.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
Length = 858
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 62/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGVDITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL-----------VSFVKLR 127
+ + +E + KE D S + L ID E L+ + +L VS ++
Sbjct: 419 IIQLQMEKMHVAKETDDASKKRLEL--IDEEIGSLQKEYADLDEIWKAEKASSVSSNDVK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARVH-----GKFKE-----KLAVD 170
Q+E D + AKR D++K +L ++ ++H G K+ + V
Sbjct: 477 KQIE--DTRLKIEQAKRAGDFAKASELEYGVLPKLTQQLHAAESSGSLKQANKLFRTQVG 534
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EE+AE+ S++TGIP S E+ ++++ L KRV GQ++A+ + +A+ + ++
Sbjct: 535 AEEVAEIVSRMTGIPVSKMMEGEREKLLKMEEVLHKRVVGQDEAVRAVADAIRR---SRS 591
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ + G FLF GP GK EL K +AN L+ D++ HLI DM Y E SI
Sbjct: 592 GLADPNKPYGSFLFLGPTGVGKTELCKTLANFLF---DSEEHLIRVDMSEYMEKHSIARL 648
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 IGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 706
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+++MTS++ + + E+ T+ Y V E + F+P L+ +D++VV
Sbjct: 707 RTVDFKNTVVVMTSNIGSQNIQEMGDTSDYAAVKEAVMDDVKAYFRPELINRIDEVVV 764
>gi|449477540|ref|XP_004155052.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 752
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 168/319 (52%), Gaps = 34/319 (10%)
Query: 158 RVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDV 217
R HG F EK V EEIA+ S+ TG+P S + +E M + GRLKKRV GQN+A+D
Sbjct: 363 RKHG-FIEKDTVGPEEIADEVSRWTGVPVSRLTGEEKEWVMGLAGRLKKRVVGQNEAVDS 421
Query: 218 IFEALTKPKAAKKGLSSRRQL-GLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFD 276
+ EA+ + +A GL+ Q G FLF GP+ GK ELAK +A+EL+ +++N ++ D
Sbjct: 422 VAEAVMRFRA---GLALPNQPNGSFLFLGPSGVGKTELAKGLAHELF---NDENRMVRID 475
Query: 277 MGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKI 324
M Y E S+ S L VK+RPY VVL D++EKA+ +LN+LL++
Sbjct: 476 MSEYMEKHSVSRLIGSPPGYVGYHEGGQLTEPVKRRPYCVVLLDEVEKAHVDVLNILLQV 535
Query: 325 LKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV----YEVMLTATYGRVNEVTGSLFKP 380
L D R + D NT+IIMTS+L + Y M A RV + FKP
Sbjct: 536 L--DDGRLTDGQGSTVDFRNTVIIMTSNLGAGHLLSEKYCPMQVARE-RVIQKVKEHFKP 592
Query: 381 SLLKLLDKLVVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNA 440
+ LD++++ PL + + + ++ RR ++ K + + + SAL + +
Sbjct: 593 EFVNRLDEILIFR---PLPKNQQRRVTKSMMKDVARRLSE-KGIAMAVTKSALDFVLDQS 648
Query: 441 ARK-YGQNGEGLKRWMDQR 458
YG ++RW++++
Sbjct: 649 FDPVYG--ARPIRRWLEKK 665
>gi|421450965|ref|ZP_15900333.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396064558|gb|EJI72943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
Length = 857
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + + ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKRLAM--LNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|54035866|sp|Q8PHQ4.2|CLPB_XANAC RecName: Full=Chaperone protein ClpB
Length = 861
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 203/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|6013196|gb|AAF01280.1|AF174433_1 heat shock protein 101 [Triticum aestivum]
Length = 913
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 237/493 (48%), Gaps = 86/493 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVIAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPL--QMKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D ++DA ++ G+ E L V +
Sbjct: 477 SLKQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEGETGENLMLTETVGPD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E +L G +V L F+P LL LD++V+
Sbjct: 709 VDFRNTVIIMTSNLGAEH----LLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEIVI 764
Query: 392 IDLAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYG 445
D P L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 765 FD---PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLSYDPVYG 815
Query: 446 QNGEGLKRWMDQR 458
++RW+++R
Sbjct: 816 --ARPIRRWIEKR 826
>gi|82408817|gb|ABB73202.1| heat shock protein 101 [Funaria hygrometrica]
Length = 908
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 132/244 (54%), Gaps = 26/244 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V E+IAEV S+ TGIP + + R + RL +RV GQ++A+ + EA+ + +A
Sbjct: 531 SVGPEQIAEVVSRWTGIPVTRLGQNEKARLLAFADRLHERVVGQDEAVQAVAEAILRSRA 590
Query: 228 AKKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
GL ++Q G FLF GP GK ELAKA+A +L+ D +N L+ DM Y E S+
Sbjct: 591 ---GLGRQQQPTGSFLFLGPTGVGKTELAKALAEQLF---DKENQLVRMDMSEYMEQHSV 644
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
S L V++RPYSVVLFD++EKA+ ++ N LL++L D R
Sbjct: 645 SRLIGSPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQLL--DDGRLTD 702
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVM-----LTATYGRVNEVTGSLFKPSLLKLLDKL 389
D TNT++IMTS+L E + + +T +V E F+P LL LD++
Sbjct: 703 GQGRTVDFTNTVVIMTSNLGAEHLLAGLSGMMSMTVAKEKVLEQVRVHFRPELLNRLDEI 762
Query: 390 VVID 393
VV +
Sbjct: 763 VVFE 766
>gi|384420306|ref|YP_005629666.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353463219|gb|AEQ97498.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 906
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 205/417 (49%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 406 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 463
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 464 LIQLKIQREMLKKEKDDASRQRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQ 523
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 524 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 581
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 582 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 638
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 639 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTE---AMIRIDMSEFIEKHSVARLIGAP 695
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+++L D++EKA++ + N+LL++L D R D
Sbjct: 696 PGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 753
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L +Q+ E+ T V V + F+P + LD +VV
Sbjct: 754 FRNTVIVMTSNLGSQQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 810
>gi|390989198|ref|ZP_10259497.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372555956|emb|CCF66472.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 859
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 203/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 417 LIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQ 476
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 477 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 535 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 707 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 763
>gi|423141231|ref|ZP_17128869.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050403|gb|EHY68295.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 823
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 384
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 385 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 442
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 443 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 502
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 503 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 559
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 560 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 616
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 617 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 674
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 675 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 728
>gi|161615589|ref|YP_001589554.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364953|gb|ABX68721.1| hypothetical protein SPAB_03370 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 820
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 324 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 381
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 382 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 439
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 440 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 499
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 500 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 556
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 557 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 613
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 614 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 671
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 672 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 725
>gi|326515338|dbj|BAK03582.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 236/493 (47%), Gaps = 86/493 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L +E D +R +R+ +L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEREKDKASKARLVDVRKELEDLRDKLQPL--QMKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D ++DA R+ G+ E L V +
Sbjct: 477 SLKQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIARLEGETGENLMLTETVGPD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E +L G +V L F+P LL LD++V+
Sbjct: 709 VDFRNTVIIMTSNLGAEH----LLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEMVI 764
Query: 392 IDLAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYG 445
D P L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 765 FD---PLSHEQLRKVARLQMKDVAARLAER------GVALAVTDAALDVILSLSYDPVYG 815
Query: 446 QNGEGLKRWMDQR 458
++RW+++R
Sbjct: 816 --ARPIRRWIEKR 826
>gi|15836983|ref|NP_297671.1| ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
gi|54035911|sp|Q9PGC1.1|CLPB_XYLFA RecName: Full=Chaperone protein ClpB
gi|9105213|gb|AAF83191.1|AE003889_8 ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
Length = 861
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 198/418 (47%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE------------LVSFVKLRMQ 129
L + ++ E L KE + S + + D E+ D F L K++
Sbjct: 419 LIQLKIQREMLKKEKDEASKQRLADLERDIEVLDREFSDLEEVWRSEKAALQGATKIKES 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I V +++L V EE
Sbjct: 479 IEQAKL--DLEAAQRRQDYAK-MSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S ++ +R++ L +RV GQ +AI V+ +A+ + ++ GLS
Sbjct: 536 IAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQEEAIKVVSDAVRR---SRTGLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D+ D ++ DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA---MVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ + T V EV + F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMEVVQAHFRPEFINRLDDIVV 765
>gi|437206649|ref|ZP_20712540.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435206371|gb|ELN89901.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
Length = 543
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 47 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 104
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 105 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 162
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 163 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 222
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 223 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 279
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+ +
Sbjct: 280 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 336
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 337 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 394
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 395 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 448
>gi|445275841|ref|ZP_21410580.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|444887455|gb|ELY11153.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 832
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 336 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 393
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 394 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 451
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 452 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 511
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 512 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 568
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 569 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 625
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 626 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 683
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 684 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 737
>gi|340000316|ref|YP_004731200.1| ClpB protein [Salmonella bongori NCTC 12419]
gi|339513678|emb|CCC31433.1| ClpB protein (heat shock protein f84.1) [Salmonella bongori NCTC
12419]
Length = 857
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELNDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSHNFRPEFINRIDEVVV 762
>gi|242054405|ref|XP_002456348.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
gi|241928323|gb|EES01468.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
Length = 915
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 209/417 (50%), Gaps = 58/417 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 365 HGVRIQDRALVIAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 419
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFEL-VSFVKLRMQVE----- 131
+ + VE L KE D +R +R+ + L+D L + + K + +++
Sbjct: 420 ERKRIQLEVELHALEKEKDKASKARLVEVRKELDNLRDKLQPLQMRYRKEKERIDEIRKL 479
Query: 132 ---YDDFVSCVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVEEI 174
++ + + +A+R D +++ D +IDA ++ G+ E L V E+I
Sbjct: 480 KHRREELLFSLQEAERRMDLARVADIRYGALQEIDAAIAKLEGETGENLMLTETVGPEQI 539
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ++A++ I EA+ + +A GL
Sbjct: 540 AEVVSRWTGIPVTRLGQNDKERLVGLADRLHRRVIGQHEAVNAIAEAVLRSRA---GLGR 596
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+ D++ L+ DM Y E S+ +
Sbjct: 597 TQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDEKLLVRLDMSEYMEKHSVSRLIGAP 653
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+LFD++EKA+ ++ N LL++L D R D
Sbjct: 654 PGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRTVD 711
Query: 342 LTNTLIIMTSDLKDEQVYEVM-----LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+IIMTS++ + + M + A V F+P LL LD++V+ D
Sbjct: 712 FRNTVIIMTSNIGAKHLLAGMVGNNSMKAARDLVMLEVRKHFRPELLNRLDEIVIFD 768
>gi|417533052|ref|ZP_12187218.1| ClpB protein, partial [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|353661423|gb|EHD00752.1| ClpB protein, partial [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
Length = 541
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 45 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 102
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 103 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 160
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 161 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 220
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 221 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 277
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+ +
Sbjct: 278 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 334
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 335 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 392
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 393 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 446
>gi|418861151|ref|ZP_13415719.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|392825185|gb|EJA80940.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
Length = 649
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 153 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 210
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 211 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 268
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 269 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 328
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 329 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 385
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+ +
Sbjct: 386 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 442
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 443 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 500
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 501 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 554
>gi|417385010|ref|ZP_12150193.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353607067|gb|EHC61103.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 798
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 302 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 360 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 417
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 418 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 478 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 535 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 650 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 703
>gi|56414627|ref|YP_151702.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181233|ref|YP_217650.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|168262170|ref|ZP_02684143.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168464169|ref|ZP_02698086.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822477|ref|ZP_02834477.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194443281|ref|YP_002041924.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194472869|ref|ZP_03078853.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736447|ref|YP_002115671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248685|ref|YP_002147563.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197363554|ref|YP_002143191.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243260|ref|YP_002216671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388055|ref|ZP_03214667.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204929414|ref|ZP_03220488.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|224584513|ref|YP_002638311.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238909506|ref|ZP_04653343.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375115573|ref|ZP_09760743.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375120160|ref|ZP_09765327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|409246359|ref|YP_006887066.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416425230|ref|ZP_11692265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416428136|ref|ZP_11693636.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438592|ref|ZP_11699571.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416444260|ref|ZP_11703575.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416451863|ref|ZP_11708613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416457253|ref|ZP_11712041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416471313|ref|ZP_11719159.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416474725|ref|ZP_11720290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416489037|ref|ZP_11726006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416497226|ref|ZP_11729608.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416507694|ref|ZP_11735638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416515027|ref|ZP_11738438.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416527361|ref|ZP_11743196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416532861|ref|ZP_11745893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416540936|ref|ZP_11750686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416549265|ref|ZP_11755302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416563432|ref|ZP_11762785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416573080|ref|ZP_11767664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579681|ref|ZP_11771475.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416587188|ref|ZP_11775896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594256|ref|ZP_11780337.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597887|ref|ZP_11782274.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606432|ref|ZP_11787774.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416616636|ref|ZP_11794260.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619236|ref|ZP_11794996.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416632441|ref|ZP_11801430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640766|ref|ZP_11805195.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416647656|ref|ZP_11808528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416661132|ref|ZP_11815354.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416665644|ref|ZP_11816879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416677945|ref|ZP_11822385.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416706416|ref|ZP_11831675.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416711904|ref|ZP_11835615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416718100|ref|ZP_11840208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416726683|ref|ZP_11846728.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416733321|ref|ZP_11850397.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416737812|ref|ZP_11852954.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416747220|ref|ZP_11858196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416758177|ref|ZP_11863529.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765406|ref|ZP_11868787.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771063|ref|ZP_11872368.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418482222|ref|ZP_13051245.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418492655|ref|ZP_13059136.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418497418|ref|ZP_13063838.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418500676|ref|ZP_13067070.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504930|ref|ZP_13071283.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510546|ref|ZP_13076826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524997|ref|ZP_13090981.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418760238|ref|ZP_13316395.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418766415|ref|ZP_13322491.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418773353|ref|ZP_13329340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418774360|ref|ZP_13330329.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780080|ref|ZP_13335973.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418782674|ref|ZP_13338535.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418790107|ref|ZP_13345887.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418791658|ref|ZP_13347413.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797885|ref|ZP_13353567.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418803885|ref|ZP_13359501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418805630|ref|ZP_13361212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418809792|ref|ZP_13365341.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817880|ref|ZP_13373362.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418823718|ref|ZP_13379125.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833712|ref|ZP_13388630.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418838050|ref|ZP_13392905.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418841636|ref|ZP_13396454.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418846612|ref|ZP_13401380.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851349|ref|ZP_13406062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418856356|ref|ZP_13411002.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418865541|ref|ZP_13420018.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418865981|ref|ZP_13420446.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419786445|ref|ZP_14312172.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419792847|ref|ZP_14318477.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421887443|ref|ZP_16318600.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|437829716|ref|ZP_20844238.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|440766164|ref|ZP_20945163.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|445141004|ref|ZP_21385209.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445157178|ref|ZP_21392909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|452123537|ref|YP_007473785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|56128884|gb|AAV78390.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62128866|gb|AAX66569.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|194401944|gb|ACF62166.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194459233|gb|EDX48072.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711949|gb|ACF91170.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633279|gb|EDX51693.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197095031|emb|CAR60577.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212388|gb|ACH49785.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197937776|gb|ACH75109.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605153|gb|EDZ03698.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204321133|gb|EDZ06333.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205341135|gb|EDZ27899.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349068|gb|EDZ35699.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224469040|gb|ACN46870.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320087093|emb|CBY96861.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322614490|gb|EFY11421.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621445|gb|EFY18298.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624306|gb|EFY21139.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629395|gb|EFY26173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633635|gb|EFY30377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638322|gb|EFY35020.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639760|gb|EFY36443.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647378|gb|EFY43874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650452|gb|EFY46862.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656055|gb|EFY52355.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661449|gb|EFY57674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662649|gb|EFY58857.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667022|gb|EFY63197.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671391|gb|EFY67514.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677602|gb|EFY73665.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681572|gb|EFY77602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683972|gb|EFY79982.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322715719|gb|EFZ07290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323195541|gb|EFZ80719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197914|gb|EFZ83037.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203092|gb|EFZ88124.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210517|gb|EFZ95401.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218202|gb|EGA02914.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221532|gb|EGA05945.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323230965|gb|EGA15083.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234683|gb|EGA18769.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238722|gb|EGA22772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241421|gb|EGA25452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246881|gb|EGA30848.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253280|gb|EGA37110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257076|gb|EGA40785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260451|gb|EGA44062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264492|gb|EGA47998.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269627|gb|EGA53080.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326624427|gb|EGE30772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|363553272|gb|EHL37528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363556032|gb|EHL40250.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363564474|gb|EHL48522.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363569331|gb|EHL53293.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363569941|gb|EHL53886.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363571863|gb|EHL55763.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363572447|gb|EHL56339.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366054678|gb|EHN19026.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366055874|gb|EHN20208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366064955|gb|EHN29152.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366068546|gb|EHN32686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366069829|gb|EHN33950.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366076744|gb|EHN40780.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830316|gb|EHN57188.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207197|gb|EHP20697.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379982933|emb|CCF90873.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392618124|gb|EIX00536.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392621684|gb|EIX04034.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730160|gb|EIZ87410.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392738004|gb|EIZ95154.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742866|gb|EIZ99943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392750562|gb|EJA07524.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392751172|gb|EJA08127.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392759168|gb|EJA16024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392759665|gb|EJA16513.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392767929|gb|EJA24689.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392770497|gb|EJA27223.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392772233|gb|EJA28936.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392783589|gb|EJA40207.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392784383|gb|EJA40984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392785709|gb|EJA42280.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392786838|gb|EJA43387.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392794914|gb|EJA51300.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392797356|gb|EJA53673.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392808313|gb|EJA64364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392810065|gb|EJA66091.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392817795|gb|EJA73699.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392819681|gb|EJA75539.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392827764|gb|EJA83465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840829|gb|EJA96363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|435303916|gb|ELO79738.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|436423564|gb|ELP21374.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444846612|gb|ELX71773.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444851725|gb|ELX76812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|451912541|gb|AGF84347.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 857
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|207858010|ref|YP_002244661.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|378956364|ref|YP_005213851.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|421360375|ref|ZP_15810657.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361704|ref|ZP_15811961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369377|ref|ZP_15819552.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370962|ref|ZP_15821123.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378529|ref|ZP_15828613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421383159|ref|ZP_15833201.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386614|ref|ZP_15836625.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421389951|ref|ZP_15839927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394229|ref|ZP_15844171.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400925|ref|ZP_15850806.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403251|ref|ZP_15853104.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421410027|ref|ZP_15859812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412138|ref|ZP_15861900.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421415313|ref|ZP_15865041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423252|ref|ZP_15872912.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427902|ref|ZP_15877520.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421430574|ref|ZP_15880160.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421433808|ref|ZP_15883365.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421440416|ref|ZP_15889896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421444185|ref|ZP_15893623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436611647|ref|ZP_20513921.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436798555|ref|ZP_20523439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436810228|ref|ZP_20529335.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812334|ref|ZP_20530913.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436832908|ref|ZP_20537198.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852710|ref|ZP_20542768.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436861467|ref|ZP_20548651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862274|ref|ZP_20549069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872649|ref|ZP_20555531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882986|ref|ZP_20561570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436891271|ref|ZP_20565971.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436897935|ref|ZP_20570103.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436903329|ref|ZP_20573793.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914583|ref|ZP_20579430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919284|ref|ZP_20582065.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436923294|ref|ZP_20585134.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436938811|ref|ZP_20593598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436944521|ref|ZP_20596968.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948206|ref|ZP_20598478.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436960075|ref|ZP_20604146.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436973706|ref|ZP_20610830.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985723|ref|ZP_20615173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436998540|ref|ZP_20620023.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437010458|ref|ZP_20624268.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437015822|ref|ZP_20625967.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437027158|ref|ZP_20630047.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043329|ref|ZP_20636842.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053314|ref|ZP_20642429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437062236|ref|ZP_20647602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067153|ref|ZP_20650215.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078303|ref|ZP_20656000.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085710|ref|ZP_20660261.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437096519|ref|ZP_20664876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437115753|ref|ZP_20669509.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118290|ref|ZP_20670257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437132350|ref|ZP_20677874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437140770|ref|ZP_20682744.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148596|ref|ZP_20687651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437155766|ref|ZP_20691984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437163186|ref|ZP_20696495.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437168948|ref|ZP_20699386.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179490|ref|ZP_20705405.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437188751|ref|ZP_20710546.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437263399|ref|ZP_20719573.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437269919|ref|ZP_20723088.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437273894|ref|ZP_20724987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437302718|ref|ZP_20733644.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437315526|ref|ZP_20737214.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437327398|ref|ZP_20740340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437342506|ref|ZP_20745414.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437411738|ref|ZP_20752916.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437443261|ref|ZP_20758006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437467132|ref|ZP_20764352.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437475832|ref|ZP_20766909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437495015|ref|ZP_20772615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437503209|ref|ZP_20774826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437542120|ref|ZP_20782544.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437555930|ref|ZP_20784897.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437579134|ref|ZP_20791659.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437586610|ref|ZP_20793465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437608524|ref|ZP_20800713.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437624017|ref|ZP_20805185.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437650000|ref|ZP_20809637.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437662975|ref|ZP_20813696.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677959|ref|ZP_20817450.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437690912|ref|ZP_20820543.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437714417|ref|ZP_20827651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437794804|ref|ZP_20837444.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437801405|ref|ZP_20838137.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437965280|ref|ZP_20852572.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438094745|ref|ZP_20861700.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438104522|ref|ZP_20865879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438111003|ref|ZP_20868291.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438148248|ref|ZP_20876294.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445171861|ref|ZP_21396270.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445183346|ref|ZP_21398674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445228312|ref|ZP_21404655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445327269|ref|ZP_21412731.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445348332|ref|ZP_21419617.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445354827|ref|ZP_21421632.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|206709813|emb|CAR34165.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|357206975|gb|AET55021.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|395981500|gb|EJH90721.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395982460|gb|EJH91668.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395992138|gb|EJI01257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395996258|gb|EJI05310.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395996388|gb|EJI05439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396005582|gb|EJI14560.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396012437|gb|EJI21334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396015010|gb|EJI23893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396015555|gb|EJI24429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396021759|gb|EJI30574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022904|gb|EJI31707.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396029199|gb|EJI37937.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396037731|gb|EJI46377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043381|gb|EJI51984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396048102|gb|EJI56664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396050475|gb|EJI58999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396054400|gb|EJI62892.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396061471|gb|EJI69896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396068551|gb|EJI76899.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396068934|gb|EJI77279.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434938293|gb|ELL45288.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434960435|gb|ELL53814.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965476|gb|ELL58417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434969476|gb|ELL62180.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434976430|gb|ELL68666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434981507|gb|ELL73394.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984643|gb|ELL76371.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434985911|gb|ELL77598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434999274|gb|ELL90471.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|434999506|gb|ELL90680.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435002972|gb|ELL94017.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435005400|gb|ELL96320.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014066|gb|ELM04676.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019759|gb|ELM10203.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435022665|gb|ELM12961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435029119|gb|ELM19177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034335|gb|ELM24225.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435039526|gb|ELM29296.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435041922|gb|ELM31655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435053115|gb|ELM42569.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435053339|gb|ELM42791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435056264|gb|ELM45655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435061294|gb|ELM50523.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435061936|gb|ELM51132.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435066629|gb|ELM55708.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435083249|gb|ELM71854.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083979|gb|ELM72580.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085217|gb|ELM73770.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435088720|gb|ELM77177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435089445|gb|ELM77878.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435097959|gb|ELM86218.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101703|gb|ELM89836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435104396|gb|ELM92451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435107420|gb|ELM95404.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435114647|gb|ELN02440.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435122620|gb|ELN10135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435129687|gb|ELN16975.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435132008|gb|ELN19212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435133227|gb|ELN20407.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435137798|gb|ELN24836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435142129|gb|ELN29046.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435149425|gb|ELN36121.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435150574|gb|ELN37239.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435155353|gb|ELN41901.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435160853|gb|ELN47097.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435171755|gb|ELN57318.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435177017|gb|ELN62364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177884|gb|ELN63148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435180002|gb|ELN65110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435191579|gb|ELN76135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435192908|gb|ELN77417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435204076|gb|ELN87791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435211052|gb|ELN94264.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435215781|gb|ELN98265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435222977|gb|ELO05024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435226964|gb|ELO08501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435235713|gb|ELO16496.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435237204|gb|ELO17903.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435241583|gb|ELO21929.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435242380|gb|ELO22691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435252808|gb|ELO32316.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435254698|gb|ELO34082.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435259776|gb|ELO38990.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435267027|gb|ELO45751.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435268272|gb|ELO46866.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435274339|gb|ELO52455.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435281395|gb|ELO59069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435286019|gb|ELO63360.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291842|gb|ELO68638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435304065|gb|ELO79876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435314312|gb|ELO87737.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435322168|gb|ELO94486.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435331518|gb|ELP02669.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435339920|gb|ELP08612.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444861013|gb|ELX85908.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444866249|gb|ELX90987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444870831|gb|ELX95302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444876273|gb|ELY00452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444880864|gb|ELY04927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444887448|gb|ELY11148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 857
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|537446|gb|AAA67927.1| AtHSP101 [Arabidopsis thaliana]
Length = 911
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 231/490 (47%), Gaps = 78/490 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 362 HGVRIQDRALINAAQLSA--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 416
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + +E L +E D +R +R+ ++L+D L + R+
Sbjct: 417 ERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRL 476
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD----------QIDARVHGKFKEKLA-----VDVEE 173
+ + ++ + + +A+R D ++ D A++ G E+ V E
Sbjct: 477 KQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEH 536
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + +ER + + RL KRV GQN A++ + EA+ + +A GL
Sbjct: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRA---GLG 593
Query: 234 SRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 594 RAQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGA 650
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY V+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 PPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVN-EVTGSL--------FKPSLLKLLDKLVV 391
D N++IIMTS+L E +L G+V EV F+P LL LD++VV
Sbjct: 709 DFRNSVIIMTSNLGAEH----LLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVV 764
Query: 392 IDLAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHI-ASNAARKYGQNG 448
D L RL +++ A +R V + + +AL +I A + YG
Sbjct: 765 FDPLSHDQLRKVARLQMKDVAVRLAER------GVALAVTDAALDYILAESYDPVYG--A 816
Query: 449 EGLKRWMDQR 458
++RWM+++
Sbjct: 817 RPIRRWMEKK 826
>gi|205353699|ref|YP_002227500.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|375124555|ref|ZP_09769719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|205273480|emb|CAR38457.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326628805|gb|EGE35148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
Length = 857
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|436751232|ref|ZP_20520160.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434970226|gb|ELL62855.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
Length = 855
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|440771618|ref|ZP_20950532.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420859|gb|ELP18714.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
Length = 857
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 762
>gi|18410584|ref|NP_565083.1| heat shock protein 101 [Arabidopsis thaliana]
gi|21264430|sp|P42730.2|CLPB1_ARATH RecName: Full=Chaperone protein ClpB1; AltName: Full=ATP-dependent
Clp protease ATP-binding subunit ClpB homolog 1;
AltName: Full=Casein lytic proteinase B1; AltName:
Full=Heat shock protein 101
gi|6715468|gb|AAF26423.1|AF218796_1 heat shock protein 101 [Arabidopsis thaliana]
gi|12324908|gb|AAG52410.1|AC020579_12 heat shock protein 101; 13093-16240 [Arabidopsis thaliana]
gi|332197455|gb|AEE35576.1| heat shock protein 101 [Arabidopsis thaliana]
Length = 911
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 231/490 (47%), Gaps = 78/490 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 362 HGVRIQDRALINAAQLSA--RYITGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 416
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + +E L +E D +R +R+ ++L+D L + R+
Sbjct: 417 ERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRL 476
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD----------QIDARVHGKFKEKLA-----VDVEE 173
+ + ++ + + +A+R D ++ D A++ G E+ V E
Sbjct: 477 KQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEH 536
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + +ER + + RL KRV GQN A++ + EA+ + +A GL
Sbjct: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRA---GLG 593
Query: 234 SRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 594 RPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVSRLIGA 650
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY V+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 PPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVN-EVTGSL--------FKPSLLKLLDKLVV 391
D N++IIMTS+L E +L G+V EV F+P LL LD++VV
Sbjct: 709 DFRNSVIIMTSNLGAEH----LLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVV 764
Query: 392 IDLAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHI-ASNAARKYGQNG 448
D L RL +++ A +R V + + +AL +I A + YG
Sbjct: 765 FDPLSHDQLRKVARLQMKDVAVRLAER------GVALAVTDAALDYILAESYDPVYG--A 816
Query: 449 EGLKRWMDQR 458
++RWM+++
Sbjct: 817 RPIRRWMEKK 826
>gi|417367236|ref|ZP_12139198.1| ClpB protein, partial [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353589753|gb|EHC48468.1| ClpB protein, partial [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 535
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 39 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 96
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 97 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 154
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 155 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 214
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 215 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 271
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+ +
Sbjct: 272 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 328
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 329 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 386
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 387 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 440
>gi|417343112|ref|ZP_12123749.1| ClpB protein [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|417360076|ref|ZP_12134283.1| ClpB protein [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353587603|gb|EHC46857.1| ClpB protein [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|357955793|gb|EHJ81489.1| ClpB protein [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 547
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 51 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 108
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 109 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 166
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 167 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 226
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 227 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 283
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+ +
Sbjct: 284 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 340
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 341 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 398
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 399 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 452
>gi|417949670|ref|ZP_12592802.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
gi|342807810|gb|EGU42988.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
Length = 857
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L E+ + S + LR + EL D F EL +K
Sbjct: 419 IIQLKIEQQALTNENDEASEK--RLRTLQAELSDKERDFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E + V EI
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
A+V SK TGIP S +E+ ++++G L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 ADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNKPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D+IEKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV G F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSSKIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVV 762
>gi|375002451|ref|ZP_09726791.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353077139|gb|EHB42899.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 861
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 766
>gi|418464566|ref|ZP_13035505.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756521|gb|EHK90678.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 856
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRK--RLEMLEKELAEKEREYAELEEVWKAEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPELEKQLAQAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLT---ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E A V EV G F+P + +D+ V+
Sbjct: 709 FRNTVVIMTSNLGSDLIQEHAQEGDDAVKSMVMEVVGRYFRPEFINRIDETVM 761
>gi|148978564|ref|ZP_01815016.1| ClpB protein [Vibrionales bacterium SWAT-3]
gi|145962353|gb|EDK27634.1| ClpB protein [Vibrionales bacterium SWAT-3]
Length = 857
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L E+ + S + LR + EL D F EL +K
Sbjct: 419 IIQLKIEQQALTNENDEASEK--RLRTLQAELSDKERDFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E + V EI
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
A+V SK TGIP S +E+ ++++G L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 ADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNKPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D+IEKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV G F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSSRIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVV 762
>gi|332289023|ref|YP_004419875.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
gi|330431919|gb|AEC16978.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
Length = 857
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 198/412 (48%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFV----------KLRMQVE 131
+ + +E + L KE+ D S + + + + K+ + + V ++ E
Sbjct: 419 IIQLKLEQQALQKEEDDASRKRLEMLEKELAEKEKEYSELEEVWKSEKAALSGAQHIKAE 478
Query: 132 YDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEIAE 176
D+ + + A R D +K+ + Q++ + + KE + V EEIAE
Sbjct: 479 LDNAKTKMEQAYRAGDIAKMSELKYSTIPALEKQLEQAENAEGKEMSLLRYRVTDEEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S+ TGIP + +E+ +R++ L KRV GQN+A++ + A+ + +A GLS
Sbjct: 539 VLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQNEAVEAVANAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL K +AN L+D+ D +I DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMIRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSVVL D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHRDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + +YG + E V G F+P + +D+ VV
Sbjct: 711 NTVVIMTSNLGSDLIQSQAGDLSYGEMKELVMSVVGQHFRPEFINRIDETVV 762
>gi|373465528|ref|ZP_09556986.1| ATP-dependent chaperone protein ClpB [Lactobacillus kisonensis
F0435]
gi|371760187|gb|EHO48883.1| ATP-dependent chaperone protein ClpB [Lactobacillus kisonensis
F0435]
Length = 865
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 68/426 (15%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
LE H ++I D AL A++++ R L ++ ID++ + + +LD
Sbjct: 358 GLEIHHGVRIHDNALVAAAKLSD--RYITDRNLPDKAIDLVDEASAEIRVEMNSSPTQLD 415
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
+ + L R VE L KE+TD +S+ L+++ EL + E V+ + R + E D +
Sbjct: 416 QARRQLMRQEVEQTAL-KEETDDASKK-RLKELQAELANTQ-EKVNALNARWKQE-KDAI 471
Query: 137 SCVHDAKRVKDYSK---------------------ILDQIDARV--------HGKFKEKL 167
+ D K+ D +K + Q++A + H +
Sbjct: 472 QKISDKKKQLDQAKNDLKQAENTYDLNKAAVLQHGTIPQLEAELSKLEQNDQHADWLVSE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ +R+ L +RV GQ+ A+ + +A+ + +A
Sbjct: 532 SVTANEIASVVSRETGIPVTKLVEGERKKLLRLADNLHQRVIGQDAAVTAVSDAVIRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+D+ +NH++ DM Y E ES+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLFDS---ENHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVL--DDGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT----------YGRVNEVTGSLFKPSLLKL 385
D NT++IMTS+L +++L T RVN++ + FKP L
Sbjct: 705 QGRTIDFKNTILIMTSNLGS----DILLAGTDDNGDISDQAKQRVNQLLKTSFKPEFLNR 760
Query: 386 LDKLVV 391
+D +++
Sbjct: 761 IDDVIM 766
>gi|238921070|ref|YP_002934585.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
gi|238870639|gb|ACR70350.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
Length = 857
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFE---------LVSFVKLRMQ 129
+ + +E + L KE + S + + I+ E K+ A E L ++ +
Sbjct: 419 IIQLKLEQQALKKESDEASKKRLEILNIELEEKERDYASLEEEWKAEKAALTGTQNIKAE 478
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDVEEI 174
+E + A+R D Y K+ D Q + GK + L V EI
Sbjct: 479 IEQAKI--ALEQARRSGDLAQMSEIQYGKLPDLEKQLQAATQAEGKSMKLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++G L KRV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEGELHKRVVGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN L+D++D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT++IMTS+L + + + +YG + + S+ F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQDRFGDQSYGEMKALVMSVVTHHFRPEFINRIDETVV 762
>gi|326511825|dbj|BAJ92057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 914
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 236/493 (47%), Gaps = 86/493 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L +E D +R +R+ +L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEREKDKASKARLVDVRKELEDLRDKLQPL--QMKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D ++DA R+ G+ E L V +
Sbjct: 477 SLKQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIARLEGETGENLMLTETVGPD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L + +L G +V L F+P LL LD++V+
Sbjct: 709 VDFRNTVIIMTSNLGAKH----LLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEMVI 764
Query: 392 IDLAVP-----LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYG 445
D P L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 765 FD---PLSHEQLRKVARLQMKDVAARLAER------GVALAVTDAALDVILSLSYDPVYG 815
Query: 446 QNGEGLKRWMDQR 458
++RW+++R
Sbjct: 816 --ARPIRRWIEKR 826
>gi|378775645|ref|YP_005177888.1| chaperone protein ClpB [Pasteurella multocida 36950]
gi|356598193|gb|AET16919.1| chaperone protein ClpB [Pasteurella multocida 36950]
Length = 855
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVKL---------RMQVE 131
+ + +E + L KED D S + + + + E + + EL K ++ E
Sbjct: 418 IIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAE 477
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
D + + A+R D++K + ++ V +++LA V EEIA
Sbjct: 478 LDSAKTQMEQARRASDFAK-MSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIA 536
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP + +E+ +R++ L KRV GQ++AI+ + A+ + +A GLS
Sbjct: 537 EVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRA---GLSDP 593
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL K +AN L+ D++N ++ DM + E S+ +
Sbjct: 594 NRPIGSFLFLGPTGVGKTELCKTLANFLF---DDENAMVRIDMSEFMEKHSVSRLVGAPP 650
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVDF 708
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + E T Y + E V G F+P + +D+ VV
Sbjct: 709 RNTVVIMTSNLGSHLIQENS-TLDYSSMKELVMSVVGQHFRPEFINRIDETVV 760
>gi|168058716|ref|XP_001781353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667246|gb|EDQ53881.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 204/422 (48%), Gaps = 67/422 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +++ D AL +A++++ R + L ++ ID++ + C N R + + ++
Sbjct: 362 HGVRLLDRALVVAAQLSS--RYITSRFLPDKAIDLIDEA---CANVRVQLDSQPEEIDVL 416
Query: 82 LRRAV---VEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE------ 131
RR + VE + KE D +R +RQ L+D L K++ Q E
Sbjct: 417 ERRRIQLEVEAHAMEKEKDKASKARLVEIRQELQNLEDQLRPL----KMKYQREKERVDE 472
Query: 132 -------YDDFVSCVHDAKRVKDYSKILD-------QIDARVHGKFKEKL--------AV 169
+D + + DA+R D ++ D ++D + +++ +V
Sbjct: 473 LRKLKQKREDLQASLLDAERRYDLARAADLKYGALVEVDKAIQKMEQQESGENTMLTESV 532
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
E IAEV S+ TGIP + + R + + RL +RV GQ++A+ + EA+ + +A
Sbjct: 533 GPEHIAEVVSRWTGIPVTRLGQNEKARLLGLADRLHQRVVGQDEAVQAVAEAILRSRA-- 590
Query: 230 KGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GL ++Q G FLF GP GK ELAKA+A +L+ D +N L+ DM Y E S+
Sbjct: 591 -GLGRQQQPTGSFLFLGPTGVGKTELAKALAEQLF---DKENQLVRMDMSEYMEQHSVAR 646
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
S L V++RPYSVVLFD++EKA+ ++ N LL++L D R
Sbjct: 647 LIGSPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQLL--DDGRLTDGQ 704
Query: 337 IAAFDLTNTLIIMTSDLKDEQV---YEVMLTATYG--RVNEVTGSLFKPSLLKLLDKLVV 391
D TNT+IIMTS+L E + M++ +V E F+P LL LD++VV
Sbjct: 705 GRTVDFTNTVIIMTSNLGAEHLLMGLSGMMSMDIAKEKVLEQVRVHFRPELLNRLDEIVV 764
Query: 392 ID 393
+
Sbjct: 765 FE 766
>gi|54035818|sp|Q7X2S8.1|CLPB_MEIRU RecName: Full=Chaperone protein ClpB
gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber]
Length = 854
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 203/416 (48%), Gaps = 60/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKR---CLNSRDKYQKELDKH 78
H ++I D AL A++++ R A +L ++ ID++ + R L S + L++
Sbjct: 352 HGVRISDPALIAAAQLSH--RYIADRKLPDKAIDLVDEAAARLRMALESSPESIDALNRR 409
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVS-----------FVKLR 127
K L +E E L KE TD S+ F L +++ E+ D E+ KLR
Sbjct: 410 KLQLE---IEREALKKE-TDAESK-FRLGELEKEIADLEEEIRKQQAEWEAEREIMQKLR 464
Query: 128 M-QVEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKLAVDVE 172
Q D+ + + A+R D +K ++++ R+ G + V E
Sbjct: 465 AAQQRLDEVRTQIEQAERAYDLNKAAPLRYGELPKLEQEVNELADRMAGAQFVRPMVTEE 524
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IA + S+ TGIP + E+ +R++ L KRV GQ++AI + +A+ + +A K
Sbjct: 525 DIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAGLK-- 582
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK ELAK +A L+D +N ++ DM Y E ++ +
Sbjct: 583 DPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEEN---MVRIDMSEYQEKHTVARLIGA 639
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 640 PPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVL--DDGRLTDGQGRTV 697
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTA-TYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+II+TS++ ++E + + +Y + E V G L F+P L LD++VV
Sbjct: 698 DFRNTVIILTSNIGSPLIFEGIQSGQSYETIRERVFGVLQQHFRPEFLNRLDEIVV 753
>gi|381401592|ref|ZP_09926490.1| ClpB protein [Kingella kingae PYKK081]
gi|380833446|gb|EIC13316.1| ClpB protein [Kingella kingae PYKK081]
Length = 858
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 207/421 (49%), Gaps = 68/421 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKG---IKRCLNSRDKYQKELDKH 78
H + I D A+ A+ ++ R L ++ ID++ + IK L+S+ + +LD+
Sbjct: 361 HGVDITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAASHIKMELDSKPEQMDKLDRR 418
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL-----------VSFV 124
L+ +E + KE D S + L ID E L+ + +L VS
Sbjct: 419 IIQLQ---MEKMHVAKETDDASKKRLEL--IDEEIGNLQKEYADLDEIWKAEKASSVSSN 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARVH-----GKFKE-----KL 167
++ Q+E D + AKR D++K +L ++ ++H G K+ +
Sbjct: 474 DVKKQIE--DTRLKIEQAKRAGDFAKASELEYGVLPKLTQQLHAAESSGSLKQANKLFRT 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V EE+AE+ S++TGIP S E+ ++++ L KRV GQ++A+ + +A+ +
Sbjct: 532 QVGAEEVAEIVSRMTGIPVSKMMEGEREKLLKMEEVLHKRVVGQDEAVRAVADAIRR--- 588
Query: 228 AKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
++ GL+ + G FLF GP GK EL K +AN L+ D++ HLI DM Y E SI
Sbjct: 589 SRSGLADPNKPYGSFLFLGPTGVGKTELCKTLANFLF---DSEEHLIRVDMSEYMEKHSI 645
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 646 ARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTD 703
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLV 390
D NT+++MTS++ + + E+ T+ Y V E + F+P L+ +D++V
Sbjct: 704 GQGRTVDFKNTVVVMTSNIGSQNIQEMGDTSDYAAVKEAVMDDVKAYFRPELINRIDEVV 763
Query: 391 V 391
V
Sbjct: 764 V 764
>gi|417854553|ref|ZP_12499843.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338217755|gb|EGP03595.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 855
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVKL---------RMQVE 131
+ + +E + L KED D S + + + + E + + EL K ++ E
Sbjct: 418 IIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAE 477
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
D + + A+R D++K + ++ V +++LA V EEIA
Sbjct: 478 LDSAKTQMEQARRASDFAK-MSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIA 536
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP + +E+ +R++ L KRV GQ++AI+ + A+ + +A GLS
Sbjct: 537 EVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRA---GLSDP 593
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL K +AN L+ D++N ++ DM + E S+ +
Sbjct: 594 NRPIGSFLFLGPTGVGKTELCKTLANFLF---DDENAMVRIDMSEFMEKHSVSRLVGAPP 650
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVDF 708
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + E T Y + E V G F+P + +D+ VV
Sbjct: 709 RNTVVIMTSNLGSHLIQENS-TLDYPNMKELVMSVVGQHFRPEFINRIDETVV 760
>gi|366161829|ref|ZP_09461691.1| protein disaggregation chaperone [Escherichia sp. TW09308]
gi|432373208|ref|ZP_19616246.1| chaperone ClpB [Escherichia coli KTE11]
gi|430895214|gb|ELC17485.1| chaperone ClpB [Escherichia coli KTE11]
Length = 857
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y R+ E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYARMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|383311735|ref|YP_005364545.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|386835582|ref|YP_006240901.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
gi|380873007|gb|AFF25374.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|385202287|gb|AFI47142.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
Length = 855
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVKL---------RMQVE 131
+ + +E + L KED D S + + + + E + + EL K ++ E
Sbjct: 418 IIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAE 477
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
D + + A+R D++K + ++ V +++LA V EEIA
Sbjct: 478 LDSAKTQMEQARRASDFAK-MSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIA 536
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP + +E+ +R++ L KRV GQ++AI+ + A+ + +A GLS
Sbjct: 537 EVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRA---GLSDP 593
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL K +AN L+ D++N ++ DM + E S+ +
Sbjct: 594 NRPIGSFLFLGPTGVGKTELCKTLANFLF---DDENAMVRIDMSEFMEKHSVSRLVGAPP 650
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVDF 708
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + E T Y + E V G F+P + +D+ VV
Sbjct: 709 RNTVVIMTSNLGSHLIQENS-TLDYPSMKELVMSVVGQHFRPEFINRIDETVV 760
>gi|84622886|ref|YP_450258.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84366826|dbj|BAE67984.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 861
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 204/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDDASRQRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLIANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E ++ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHAVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+++L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|15603569|ref|NP_246643.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|425064424|ref|ZP_18467549.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
gi|54035898|sp|Q9CKC0.1|CLPB_PASMU RecName: Full=Chaperone protein ClpB
gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|404381174|gb|EJZ77657.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
Length = 855
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVKL---------RMQVE 131
+ + +E + L KED D S + + + + E + + EL K ++ E
Sbjct: 418 IIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAE 477
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
D + + A+R D++K + ++ V +++LA V EEIA
Sbjct: 478 LDSAKTQMEQARRASDFAK-MSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIA 536
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP + +E+ +R++ L KRV GQ++AI+ + A+ + +A GLS
Sbjct: 537 EVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRA---GLSDP 593
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL K +AN L+ D++N ++ DM + E S+ +
Sbjct: 594 NRPIGSFLFLGPTGVGKTELCKTLANFLF---DDENAMVRIDMSEFMEKHSVSRLVGAPP 650
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVDF 708
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + E T Y + E V G F+P + +D+ VV
Sbjct: 709 RNTVVIMTSNLGSHLIQENS-TLDYPSMKELVMSVVGQHFRPEFINRIDETVV 760
>gi|157310137|emb|CAJ31810.1| 101 kDa heat shock protein [Aegilops umbellulata]
Length = 563
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 232/490 (47%), Gaps = 80/490 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 14 HGVRIQDRALVIAAQLSS--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 68
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE L KE D +R +R+ ++L+D L +K R + E D +
Sbjct: 69 ERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPL--QMKYRKEKERIDEIR 126
Query: 138 CVH-----------------DAKRVKD--YSKI--LDQIDARVHGKFKEKL----AVDVE 172
+ D RV D Y + +D A++ G+ E L V +
Sbjct: 127 SLKQRREELQFTLQRPERRMDLARVADLRYGALQEVDAAIAKLEGETGENLMLTETVGPD 186
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + + R + + RL +RV GQ +A++ + EA+ + +A GL
Sbjct: 187 QIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRA---GL 243
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E S+
Sbjct: 244 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRIDMSEYMEQHSVARLIG 300
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 301 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 358
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E +L G +V L F+P LL LD++V+
Sbjct: 359 VDFRNTVIIMTSNLGAEH----LLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEIVI 414
Query: 392 IDLAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNG 448
D L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 415 FDPLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLSYDPVYG--A 466
Query: 449 EGLKRWMDQR 458
++RW+++R
Sbjct: 467 RPIRRWIEKR 476
>gi|415765950|ref|ZP_11482887.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|348653689|gb|EGY69376.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-3]
Length = 680
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 185 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 242
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 243 IIQLKLEQQALQKEDDDASRKR--LEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 300
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 301 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEI 360
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 361 AEVLSRATGIPVAKMMEGEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 417
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 418 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDA---MVRIDMSEFMEKHSVSRLVGAP 474
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 475 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 532
Query: 342 LTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E V EV G F+P + +D+ V+
Sbjct: 533 FRNTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVM 585
>gi|406026951|ref|YP_006725783.1| chaperone protein clpB [Lactobacillus buchneri CD034]
gi|405125440|gb|AFS00201.1| chaperone protein clpB [Lactobacillus buchneri CD034]
Length = 870
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 203/422 (48%), Gaps = 60/422 (14%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
SLE H ++I D AL A++++ R L ++ ID++ + + ELD
Sbjct: 358 SLEIHHGVRIHDNALVAAAKLSD--RYITDRYLPDKAIDLVDEASAEIRVEMNSSPTELD 415
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
+ K + R VE E +K++TD +S+ L++++ EL + E V+ + R E + +
Sbjct: 416 QSKRQMMRLEVE-EAALKQETDEASKK-RLKEVEEELAN-IKEKVNQLNARWSQE-KEAI 471
Query: 137 SCVHDAKRVKDYSKI----------LDQIDARVHGKFKE------KL------------- 167
+ D K+ D +K L+Q HG + KL
Sbjct: 472 KKISDKKKQLDQAKNELKQAENTYDLNQAAVLQHGTIPQLEADLKKLEDNDQHSDWLVSE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L KRV GQ+ A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVVSRETGIPVTKLVEGERKKLLHLADNLHKRVIGQDAAVTAVSDAVIRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S + LG FLF GP GK ELAKA+A +L+D+ +NH++ DM Y E ES+
Sbjct: 592 GLQDPS--KPLGSFLFLGPTGVGKTELAKALAEDLFDS---ENHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVL--DDGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L + + E V+ +VN++ + FKP L +D +
Sbjct: 705 QGRTIDFKNTILIMTSNLGSDILLEGTDENGVISQKAQQQVNQLLKASFKPEFLNRIDDV 764
Query: 390 VV 391
+
Sbjct: 765 IT 766
>gi|331701389|ref|YP_004398348.1| ATP-dependent chaperone ClpB [Lactobacillus buchneri NRRL B-30929]
gi|329128732|gb|AEB73285.1| ATP-dependent chaperone ClpB [Lactobacillus buchneri NRRL B-30929]
Length = 870
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 203/422 (48%), Gaps = 60/422 (14%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
SLE H ++I D AL A++++ R L ++ ID++ + + ELD
Sbjct: 358 SLEIHHGVRIHDNALVAAAKLSD--RYITDRYLPDKAIDLVDEASAEIRVEMNSSPTELD 415
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
+ K + R VE E +K++TD +S+ L++++ EL + E V+ + R E + +
Sbjct: 416 QSKRQMMRLEVE-EAALKQETDEASKK-RLKEVEEELAN-IKEKVNQLNARWSQE-KEAI 471
Query: 137 SCVHDAKRVKDYSKI----------LDQIDARVHGKFKE------KL------------- 167
+ D K+ D +K L+Q HG + KL
Sbjct: 472 KKISDKKKQLDQAKNELKQAENTYDLNQAAVLQHGTIPQLEADLKKLEDNDQHSDWLVSE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L KRV GQ+ A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVVSRETGIPVTKLVEGERKKLLHLADNLHKRVIGQDAAVTAVSDAVIRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S + LG FLF GP GK ELAKA+A +L+D+ +NH++ DM Y E ES+
Sbjct: 592 GLQDPS--KPLGSFLFLGPTGVGKTELAKALAEDLFDS---ENHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVL--DDGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L + + E V+ +VN++ + FKP L +D +
Sbjct: 705 QGRTIDFKNTILIMTSNLGSDILLEGTDENGVISQKAQQQVNQLLKASFKPEFLNRIDDV 764
Query: 390 VV 391
+
Sbjct: 765 IT 766
>gi|218781272|ref|YP_002432590.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
gi|218762656|gb|ACL05122.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
Length = 862
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 31/262 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E++AEV S+ TGIP S +E+ +R++ RL+KRV GQNDAI + A+ + A
Sbjct: 536 VDDEDVAEVVSRWTGIPVSKMLESEKEKLVRMESRLEKRVIGQNDAIVAVSNAVRR---A 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R +G F+F GP GK ELAKA+A ++ D+D ++ DM Y E S+
Sbjct: 593 RSGLQDPNRPIGSFIFMGPTGVGKTELAKALAEFIF---DDDQAIVRVDMSEYMEKHSVS 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSV+LFD+IEKA+ + N+LL+IL D R
Sbjct: 650 RLIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQIL--DDGRMTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT---ATYGRVNEVTGSLFKPSLLKLLDKLVVI 392
D NT+IIMTS++ + + ++ + RV + + F+P L +D+ V+
Sbjct: 708 HGKTVDFKNTIIIMTSNVGSQFIQDLGSSNPEEMRRRVMDALRATFRPEFLNRVDETVIF 767
Query: 393 ------DLA-VPLLDTTRLLLR 407
DLA V + T RL+ R
Sbjct: 768 NSLSVEDLAQVVRIQTDRLIKR 789
>gi|297622426|ref|YP_003703860.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
gi|297163606|gb|ADI13317.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
Length = 862
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 195/416 (46%), Gaps = 60/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK---- 77
H ++I D AL A+ ++ R A +L ++ ID++ + R D +E+D
Sbjct: 358 HGVEIADSALVAAATLSH--RYIADRQLPDKAIDLIDEAASRLRVQLDSLPEEIDALSRR 415
Query: 78 ------HKYFLRRAV----------VEYEQLVKEDTDHSSRSFWL--RQIDNELKDAFFE 119
+ L+R +E E ED H +RS W R++ EL++A E
Sbjct: 416 KLQLEIEQQALKREQDAESANRLLRIEEELRAIEDQIHQARSEWEAERKLLEELRNAQEE 475
Query: 120 LVSFVKLRMQVE-----YDDFVSCVHDAKRVKDYSKILDQIDARV-HGKFKEKLAVDVEE 173
+ +R Q+E YD + R+ L ++ R+ H K+ L VD +E
Sbjct: 476 RDA---VRTQIELAEREYDLNRAAELKYGRLPKLEAQLKELSERLAHAKYV-SLKVDADE 531
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
+AEV S+ T IP S E+ +R++ L KRV GQ++A+ + +A+ + A+ GLS
Sbjct: 532 VAEVVSRWTNIPLSRLLESEREKLLRLEAELHKRVVGQDEALTAVADAIRR---ARAGLS 588
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G F+F GP GK E AKA+A L+D +N LI DM Y E + +
Sbjct: 589 DPNRPIGSFIFLGPTGVGKTETAKALAELLFDTEEN---LIRLDMSEYMERHATARLIGA 645
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+LFD+IEKA+ + N LL++L D R
Sbjct: 646 PPGYIGYDEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNTLLQLL--DDGRLTDSQGRTV 703
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLT-ATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS++ Q+ E + A Y + L F+P L +D +V
Sbjct: 704 DFRNTVVIMTSNIGSPQILEASRSGADYESIKRTVFGLLQTHFRPEFLNRVDDTIV 759
>gi|419927010|ref|ZP_14444753.1| protein disaggregation chaperone [Escherichia coli 541-1]
gi|388408436|gb|EIL68782.1| protein disaggregation chaperone [Escherichia coli 541-1]
Length = 857
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+DV+ A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDVVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|416068136|ref|ZP_11582660.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348001380|gb|EGY42128.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 856
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRKR--LEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E V EV G F+P + +D+ V+
Sbjct: 709 FRNTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVM 761
>gi|313200327|ref|YP_004038985.1| ATP-dependent chaperone clpb [Methylovorus sp. MP688]
gi|312439643|gb|ADQ83749.1| ATP-dependent chaperone ClpB [Methylovorus sp. MP688]
Length = 886
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 204/421 (48%), Gaps = 67/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++Q R L ++ ID++ + R D + +DK
Sbjct: 386 HGVEITDPAIVAAAELSQ--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRR 443
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL----RMQVEYDDFV- 136
L + +E E + KE + S + F L I++E+K E + + QV+ +
Sbjct: 444 LIQLKIEREAVRKEKDEASQKRFDL--IEDEIKRLEREYADLDDIWKSEKAQVQGSAHIK 501
Query: 137 -------SCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKL------------AVD 170
+ +AKR D+ ++ L Q++A+++ E+L V
Sbjct: 502 EAIEKLKQQMEEAKREGDWQRVSEMQYGKLPQLEAQLNKAASEELNGVPVKNRLLRTQVG 561
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAEV S+ TGIP S ++ + ++ +L +RV GQ++A+ ++ +A+ + ++
Sbjct: 562 AEEIAEVVSRATGIPVSKMLQGERDKLLTMEDKLHERVVGQDEAVRLVADAIRR---SRS 618
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R G FLF GP GK EL KA+AN L+ D++ HL+ DM + E S+
Sbjct: 619 GLSDPNRPYGSFLFLGPTGVGKTELCKALANFLF---DSEEHLVRIDMSEFMEKHSVSRL 675
Query: 290 F------------DSLAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 676 IGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGQG 733
Query: 338 AAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+IIMTS+L + + Y+V+ A G V + F+P + +D++V
Sbjct: 734 RTVDFKNTVIIMTSNLGSQMIQSMSGDDYQVVKLAVMGEVK----THFRPEFINRIDEVV 789
Query: 391 V 391
V
Sbjct: 790 V 790
>gi|387121076|ref|YP_006286959.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|416032186|ref|ZP_11572737.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416045010|ref|ZP_11575193.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|429732491|ref|ZP_19267101.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
actinomycetemcomitans Y4]
gi|347995838|gb|EGY36981.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|348000240|gb|EGY41029.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|385875568|gb|AFI87127.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429155999|gb|EKX98641.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
actinomycetemcomitans Y4]
Length = 856
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRKR--LEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E V EV G F+P + +D+ V+
Sbjct: 709 FRNTVVIMTSNLGSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVM 761
>gi|188578062|ref|YP_001914991.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522514|gb|ACD60459.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 898
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 204/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 398 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 455
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 456 LIQLKIQREMLKKEKDDASRQRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQ 515
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 516 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLIANEVEHHDFKLVQDRVTAEEI 573
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 574 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 630
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E ++ +
Sbjct: 631 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHAVARLIGAP 687
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+++L D++EKA++ + N+LL++L D R D
Sbjct: 688 PGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 745
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 746 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 802
>gi|260912679|ref|ZP_05919165.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
gi|260633057|gb|EEX51222.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
Length = 855
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFELVSFVKL---------RMQ 129
+ + +E + L KED D S + L ++ EL + + EL K ++
Sbjct: 418 IIQLKLEQQALQKEDDDASRK--RLEMLEKELGEKEREYAELEDVWKAEKAALSGTQHIK 475
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
E D+ + + A+R D++K + ++ V +++LA V EE
Sbjct: 476 AELDNAKTQMEQARRASDFAK-MSELQYGVIPTLEKQLAQAESAEGKEMTLLRHRVTDEE 534
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + +E+ +R++ L KRV GQ++AI+ + A+ + +A GLS
Sbjct: 535 IAEVLSRATGIPVAKMMEGEKEKLLRMEDELHKRVIGQHEAIEAVANAIRRSRA---GLS 591
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL K +AN L+ D++N ++ DM + E S+ +
Sbjct: 592 DPNRPIGSFLFLGPTGVGKTELCKTLANFLF---DDENAMVRIDMSEFMEKHSVSRLVGA 648
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTV 706
Query: 341 DLTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E + V V G F+P + +D+ VV
Sbjct: 707 DFRNTVVIMTSNLGSHLIQENKEADYDSMKALVMSVVGQHFRPEFINRIDETVV 760
>gi|386389403|ref|ZP_10074219.1| ATP-dependent chaperone protein ClpB [Haemophilus
paraphrohaemolyticus HK411]
gi|385695782|gb|EIG26333.1| ATP-dependent chaperone protein ClpB [Haemophilus
paraphrohaemolyticus HK411]
Length = 857
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 129/237 (54%), Gaps = 26/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA---MVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPEVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + E M ATYG + EV S+ F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQE-MPEATYGELKEVVMSVVSQHFRPEFINRIDETVV 761
>gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|58425554|gb|AAW74591.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 898
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 204/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 398 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 455
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSF-----------VKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 456 LIQLKIQREMLKKEKDDASRQRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQ 515
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 516 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLIANEVEHHDFKLVQDRVTAEEI 573
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 574 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 630
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E ++ +
Sbjct: 631 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHAVARLIGAP 687
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+++L D++EKA++ + N+LL++L D R D
Sbjct: 688 PGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 745
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 746 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 802
>gi|429101412|ref|ZP_19163386.1| ClpB protein [Cronobacter turicensis 564]
gi|426288061|emb|CCJ89499.1| ClpB protein [Cronobacter turicensis 564]
Length = 857
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI D Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPDLEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMLESERDKLLRMEEDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V G F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVV 762
>gi|253998254|ref|YP_003050317.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
gi|253984933|gb|ACT49790.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
Length = 861
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 204/421 (48%), Gaps = 67/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++Q R L ++ ID++ + R D + +DK
Sbjct: 361 HGVEITDPAIVAAAELSQ--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL----RMQVEYDDFV- 136
L + +E E + KE + S + F L I++E+K E + + QV+ +
Sbjct: 419 LIQLKIEREAVRKEKDEASQKRFDL--IEDEIKRLEREYADLDDIWKSEKAQVQGSAHIK 476
Query: 137 -------SCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKL------------AVD 170
+ +AKR D+ ++ L Q++A+++ E+L V
Sbjct: 477 EAIEKLKQQMEEAKREGDWQRVSEMQYGKLPQLEAQLNKAASEELNGVPVKNRLLRTQVG 536
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAEV S+ TGIP S ++ + ++ +L +RV GQ++A+ ++ +A+ + ++
Sbjct: 537 AEEIAEVVSRATGIPVSKMLQGERDKLLTMEDKLHERVVGQDEAVRLVADAIRR---SRS 593
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R G FLF GP GK EL KA+AN L+ D++ HL+ DM + E S+
Sbjct: 594 GLSDPNRPYGSFLFLGPTGVGKTELCKALANFLF---DSEEHLVRIDMSEFMEKHSVSRL 650
Query: 290 F------------DSLAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 IGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGQG 708
Query: 338 AAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+IIMTS+L + + Y+V+ A G V + F+P + +D++V
Sbjct: 709 RTVDFKNTVIIMTSNLGSQMIQSMSGDDYQVVKLAVMGEVK----THFRPEFINRIDEVV 764
Query: 391 V 391
V
Sbjct: 765 V 765
>gi|291295274|ref|YP_003506672.1| ATP-dependent chaperone ClpB [Meiothermus ruber DSM 1279]
gi|290470233|gb|ADD27652.1| ATP-dependent chaperone ClpB [Meiothermus ruber DSM 1279]
Length = 854
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 203/416 (48%), Gaps = 60/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKR---CLNSRDKYQKELDKH 78
H ++I D AL A++++ R A +L ++ ID++ + R L S + L++
Sbjct: 352 HGVRISDPALIAAAQLSH--RYIADRKLPDKAIDLVDEAAARLRMALESSPESIDALNRR 409
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVS-----------FVKLR 127
K L +E E L KE TD S+ F L +++ E+ + E+ KLR
Sbjct: 410 KLQLE---IEREALKKE-TDAESK-FRLGELEKEIAELEAEIKKQQAEWEAEREIMQKLR 464
Query: 128 M-QVEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKLAVDVE 172
Q D+ + + A+R D +K ++++ R+ G + V E
Sbjct: 465 AAQQRLDEVRTQIEQAERAYDLNKAAQLRYGELPKLEQEVNELADRMAGAQFVRPMVTEE 524
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IA + S+ TGIP + E+ +R++ L KRV GQ++AI + +A+ + +A K
Sbjct: 525 DIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAGLK-- 582
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK ELAK +A L+D +N ++ DM Y E ++ +
Sbjct: 583 DPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEEN---MVRIDMSEYQEKHTVARLIGA 639
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 640 PPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVL--DDGRLTDGQGRTV 697
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTA-TYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+II+TS++ ++E + + +Y + E V G L F+P L LD++VV
Sbjct: 698 DFRNTVIILTSNIGSPLIFEGIQSGQSYETIRERVFGVLQQHFRPEFLNRLDEIVV 753
>gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182682296|ref|YP_001830456.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|386083626|ref|YP_005999908.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|54035830|sp|Q87AX8.1|CLPB_XYLFT RecName: Full=Chaperone protein ClpB
gi|28057675|gb|AAO29523.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182632406|gb|ACB93182.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|307578573|gb|ADN62542.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 861
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 198/418 (47%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE------------LVSFVKLRMQ 129
L + ++ E L KE + S + + D E+ D F L K++
Sbjct: 419 LIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKES 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I V +++L V EE
Sbjct: 479 IEQAKL--DLEAAQRRQDYAK-MSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S ++ +R++ L +RV GQ++AI V+ +A+ + ++ GLS
Sbjct: 536 IAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQDEAIKVVSDAVRR---SRTGLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D+ D ++ DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA---MVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ + T V V + F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|417558810|ref|ZP_12209770.1| ATPase [Xylella fastidiosa EB92.1]
gi|338178645|gb|EGO81630.1| ATPase [Xylella fastidiosa EB92.1]
Length = 859
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 198/418 (47%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE------------LVSFVKLRMQ 129
L + ++ E L KE + S + + D E+ D F L K++
Sbjct: 417 LIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKES 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I V +++L V EE
Sbjct: 477 IEQAKL--DLEAAQRRQDYAK-MSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEE 533
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S ++ +R++ L +RV GQ++AI V+ +A+ + ++ GLS
Sbjct: 534 IAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQDEAIKVVSDAVRR---SRTGLS 590
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D+ D ++ DM + E S+ +
Sbjct: 591 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA---MVRIDMSEFMEKHSVARLIGA 647
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 648 PPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 705
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ + T V V + F+P + LD +VV
Sbjct: 706 DFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVVQAHFRPEFINRLDDIVV 763
>gi|425066581|ref|ZP_18469701.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
gi|404381369|gb|EJZ77846.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
Length = 855
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 59/415 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFELVSFVKL---------RMQ 129
+ + +E + L KED D +SR L ++ EL + + EL K ++
Sbjct: 418 IIQLKLEQQALQKED-DEASRK-RLAMLEKELSEKEREYAELEDVWKAEKAALSGTQHIK 475
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
E D + + A+R D++K + ++ V +++LA V EE
Sbjct: 476 AELDSAKTQMEQARRASDFAK-MSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEE 534
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + +E+ +R++ L KRV GQ++AI+ + A+ + +A GLS
Sbjct: 535 IAEVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRA---GLS 591
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL K +AN L+ D++N ++ DM + E S+ +
Sbjct: 592 DPNRPIGSFLFLGPTGVGKTELCKTLANFLF---DDENAMVRIDMSEFMEKHSVSRLVGA 648
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTV 706
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E T Y + E V G F+P + +D+ VV
Sbjct: 707 DFRNTVVIMTSNLGSHLIQENS-TLDYPSMKELVMSVVGQHFRPEFINRIDETVV 760
>gi|365971689|ref|YP_004953250.1| chaperone protein ClpB [Enterobacter cloacae EcWSU1]
gi|365750602|gb|AEW74829.1| Chaperone protein ClpB [Enterobacter cloacae EcWSU1]
Length = 861
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 203/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 418
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 419 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 477
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDV 171
++ E + + A+RV D Y KI + +I + GK L V
Sbjct: 478 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTD 537
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV ++ TGIP + ++ +R++ L +RV GQN+A++ + A+ + +A G
Sbjct: 538 EEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 710 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVMGVVSHSFRPEFINRIDEVVV 766
>gi|56480150|ref|NP_708444.2| protein disaggregation chaperone [Shigella flexneri 2a str. 301]
gi|380865371|sp|Q7UBW5.2|CLPB_SHIFL RecName: Full=Chaperone protein ClpB
gi|56383701|gb|AAN44151.2| heat shock protein [Shigella flexneri 2a str. 301]
Length = 857
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 200/418 (47%), Gaps = 56/418 (13%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
E +H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 357 FELLHHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR------- 127
+ + +E + L+KE + S + L ++ EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGT 472
Query: 128 --MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVD 170
++ E + + A+RV D Y KI + Q++A ++ GK L V
Sbjct: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EIAEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A
Sbjct: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+
Sbjct: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|238022814|ref|ZP_04603240.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
gi|237866017|gb|EEP67153.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
Length = 858
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 200/418 (47%), Gaps = 62/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGVDITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL-----------VSFVKLR 127
+ + +E + KE + S + L ID E L+ + +L VS L+
Sbjct: 419 IIQLKMERMHVEKESDEASKKRLTL--IDEEIAGLEKEYADLDEIWKAEKASSVSMSDLK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYS-----------KILDQI-DARVHGKFKE-----KLAVD 170
Q+ D+ + + AKR DY K+ Q+ DA G K+ + V
Sbjct: 477 TQI--DNLKTRIEQAKRAGDYGLASELEYGELPKLTLQLKDAERSGSLKKHNTLFRTEVG 534
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAE+ S++TGIP S E+ ++++ L +RV GQ++A+ + +A+ + ++
Sbjct: 535 AEEIAEIVSRMTGIPVSKMMEGEREKLLKMEDVLHRRVVGQDEAVRAVSDAIRR---SRS 591
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E SI
Sbjct: 592 GLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHSIARL 648
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 IGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 706
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + T+ Y V E + F+P L+ +D++VV
Sbjct: 707 RTVDFKNTVIVMTSNIGSQAIQAMGDTSDYDAVKAAVMEDVKAYFRPELINRIDEVVV 764
>gi|288574959|ref|ZP_06393316.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570700|gb|EFC92257.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 865
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 41/290 (14%)
Query: 179 SKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRRQL 238
SK TGIP S E+ +R+ L +RV GQ++A+D++ A+ + +A K RR +
Sbjct: 547 SKWTGIPVSRLVEGEREKLLRLDEILHRRVIGQDEAVDLVVNAVMRARAGIK--DPRRPI 604
Query: 239 GLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------ 292
G F+F GP GK ELAKA+A L+D +N ++ DM Y E S+ S
Sbjct: 605 GSFIFLGPTGVGKTELAKALAESLFDTEEN---IVRIDMSEYMEQHSVARLIGSPPGYVG 661
Query: 293 ------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTL 346
L V+++PYSVVLFD+IEKA+ + N+LL+IL D R D NT+
Sbjct: 662 YEDGGQLTEAVRRKPYSVVLFDEIEKAHREVFNVLLQIL--DDGRITDSHGRTVDFKNTV 719
Query: 347 IIMTSDLKDEQVYEVMLTATYGRV-----NEVTGSL---FKPSLLKLLDKLVVIDLAVPL 398
IIMTS++ ++ + ++ + G + N V G L F+P L +D +V L PL
Sbjct: 720 IIMTSNIGSARLLQGIMPS--GEIPQDIKNSVMGELRGHFRPEFLNRVDDIV---LFTPL 774
Query: 399 LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG 448
+L+ + E+ + R D K ++ + A RK G +G
Sbjct: 775 NQEQIVLIVDLLLEDLRSRLKDRKVIL---------KVTDEAMRKIGSDG 815
>gi|82778016|ref|YP_404365.1| protein disaggregation chaperone [Shigella dysenteriae Sd197]
gi|309789454|ref|ZP_07684040.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
gi|81242164|gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
gi|308922697|gb|EFP68218.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
Length = 857
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ +A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVVAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|84393598|ref|ZP_00992351.1| ClpB protein [Vibrio splendidus 12B01]
gi|84375807|gb|EAP92701.1| ClpB protein [Vibrio splendidus 12B01]
Length = 857
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 200/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L E+ + S + LR + +EL + F EL +K
Sbjct: 419 IIQLKIEQQALTNENDEASEK--RLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E + V EI
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
A+V SK TGIP S +E+ ++++G L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 ADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNKPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV G F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSSRIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVV 762
>gi|319778197|ref|YP_004129110.1| ClpB protein [Taylorella equigenitalis MCE9]
gi|397661981|ref|YP_006502681.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
gi|317108221|gb|ADU90967.1| ClpB protein [Taylorella equigenitalis MCE9]
gi|394350160|gb|AFN36074.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
gi|399115894|emb|CCG18699.1| chaperone protein ClpB [Taylorella equigenitalis 14/56]
Length = 856
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 204/428 (47%), Gaps = 86/428 (20%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRC---LNSRDKYQKELDKH 78
H ++I D A+ A+ ++ R L ++ ID++ + R ++S+ + LD+
Sbjct: 360 HGVEITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDRLDRR 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDF--- 135
L+ +E E + +ED + S R L I++EL R+Q EYDD+
Sbjct: 418 IIQLK---IEREAVRREDDEASKRRLQL--IEDELA------------RLQREYDDYEQI 460
Query: 136 ----VSCVHDAKRVKD-------------------------YSKILD---QIDARVHGKF 163
S VH + +++ Y K+ D ++ + G+
Sbjct: 461 WKAEKSSVHSVQSIREDIDKVKAQMAEYQRQGEYEKLSELQYGKLPDLELRLKSAEKGEV 520
Query: 164 KEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
K +L V EEIAEV S+ TGIP S + + ++ RL +RV GQ++A+ ++ +
Sbjct: 521 KNQLLRTEVGTEEIAEVVSRATGIPVSKMMQGERAKLLTMEDRLHERVVGQDEAVRLVSD 580
Query: 221 ALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGN 279
A+ + +A GL+ + G FLF GP GK EL KA+AN L+ D+D H++ DM
Sbjct: 581 AIRRSRA---GLADPSKPYGSFLFLGPTGVGKTELTKALANFLF---DSDEHMVRIDMSE 634
Query: 280 YTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKT 327
+ E ++ + L ++++PYSV+L D+IEKA+ + N+LL++L
Sbjct: 635 FMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILLDEIEKAHPDVFNILLQVL-- 692
Query: 328 DFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT----GSLFKPSLL 383
D R D NT+I+MTS++ +Q+ + M Y ++ +V F+P L
Sbjct: 693 DDGRLTDGQGRTVDFRNTVIVMTSNIGSQQIQK-MSGEPYEKIKDVVWDELKDSFRPEFL 751
Query: 384 KLLDKLVV 391
+D++VV
Sbjct: 752 NRIDEIVV 759
>gi|285017507|ref|YP_003375218.1| ATP-dependent clp protease subunit protein [Xanthomonas albilineans
GPE PC73]
gi|283472725|emb|CBA15230.1| putative atp-dependent clp protease subunit protein [Xanthomonas
albilineans GPE PC73]
Length = 861
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 202/418 (48%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFEL-----------VSFVKLRMQ 129
L + ++ E L KE D S + + D ++L+ F++L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDDASRQRLSDLEADIDKLEREFYDLDEVWKSEKAALQGATKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I + +++LA V EE
Sbjct: 479 IEQARV--ELEAAQRRQDYAK-MSEIQYGLLPNLEKQLAAANEAEQHEFKLVQDRVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + ++ +R++ L +RV GQ++AI V+ +A+ + +A GLS
Sbjct: 536 IAEVVSRWTGIPVNKMLEGERDKLLRMEDELHQRVVGQHEAIKVVSDAVRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D++D +I DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSDA---MIRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTESVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|325916266|ref|ZP_08178547.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
gi|325537560|gb|EGD09275.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
Length = 859
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 201/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 417 LIQLKIQREMLKKEKDEASRQRLADLETDIDKLEREFSDLNEVWKSEKAALQGTTKVKEQ 476
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 477 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 535 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVSRLIGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA++ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 707 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 763
>gi|345300451|ref|YP_004829809.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
gi|345094388|gb|AEN66024.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
Length = 857
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 202/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q++A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLEAATQAEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMMESEREKLLRMEQDLHHRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++D++D +I DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MIRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + E V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKELVLGVVSHSFRPEFINRIDEVVV 762
>gi|218708596|ref|YP_002416217.1| chaperone ClpB protein [Vibrio splendidus LGP32]
gi|218321615|emb|CAV17567.1| Chaperone clpB protein [Vibrio splendidus LGP32]
Length = 857
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L E+ + S + LR + +EL + F EL +K
Sbjct: 419 IIQLKIEQQALTNENDEASEK--RLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E + V EI
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
A+V SK TGIP S +E+ ++++G L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 ADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+ +
Sbjct: 594 PNKPIGSFLFLGPTGVGKTELCKTLANFMFDSED---AMVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV G F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSTRIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVV 762
>gi|222157291|ref|YP_002557430.1| chaperone clpB [Escherichia coli LF82]
gi|222034296|emb|CAP77037.1| chaperone clpB [Escherichia coli LF82]
Length = 823
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 384
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 385 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 442
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 443 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 502
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 503 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 559
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D +I DM + E S+ +
Sbjct: 560 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMIRIDMSEFMEKHSVSRLVGAP 616
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 617 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 674
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 675 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 728
>gi|40060485|gb|AAR37417.1| heat shock protein HSP101 [Zea mays]
Length = 912
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 207/420 (49%), Gaps = 64/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSF-VKLRMQVEYDDFVS 137
+ + VE L KE D +S++ + ++ EL D +L +K R + E D +
Sbjct: 419 ERKRIQLEVELHALEKE-KDKASKARLI-EVRKELDDLRVKLQPLTMKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QIDA---RVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +IDA ++ + E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
+ NT+IIMTS+ E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VNFRNTVIIMTSNPGAEHLLAGMVGKNSMKVARDLVMQEVRRH-FRPELLNRLDEIVIFD 767
>gi|415840105|ref|ZP_11521621.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
gi|323188385|gb|EFZ73676.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
Length = 823
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLARR 384
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 385 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 442
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 443 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 502
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 503 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 559
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 560 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 616
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 617 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 674
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 675 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 728
>gi|387774041|ref|ZP_10129321.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
HK385]
gi|386903128|gb|EIJ67948.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
HK385]
Length = 857
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 129/237 (54%), Gaps = 26/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +++ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKDKLLRMESVLHARVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPDA---MVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GASPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + E M ATYG + EV S+ F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQE-MPEATYGELKEVVMSVVSQHFRPEFINRIDETVV 761
>gi|71276549|ref|ZP_00652823.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|170730931|ref|YP_001776364.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
gi|71162620|gb|EAO12348.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|71729142|gb|EAO31265.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
gi|167965724|gb|ACA12734.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
Length = 861
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 197/418 (47%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE------------LVSFVKLRMQ 129
L + ++ E L KE + S + + D E+ D F L K++
Sbjct: 419 LIQLKIQREMLKKEKDEASKQRLADLERDIEVLDREFSDLEEVWRSEKAALQGATKIKES 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I V +++L V EE
Sbjct: 479 IEQAKL--DLEAAQRRQDYAK-MSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S ++ +R++ L +RV GQ +AI V+ +A+ + ++ GLS
Sbjct: 536 IAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQEEAIKVVSDAVRR---SRTGLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D+ D ++ DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA---MVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ + T V V + F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|227513304|ref|ZP_03943353.1| S14 family endopeptidase Clp [Lactobacillus buchneri ATCC 11577]
gi|227083505|gb|EEI18817.1| S14 family endopeptidase Clp [Lactobacillus buchneri ATCC 11577]
Length = 869
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 60/422 (14%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
LE H ++I D AL A++++ R L ++ ID++ + + LD
Sbjct: 358 GLEIHHGVRIHDNALVAAAKLSD--RYITDRNLPDKAIDLVDEASAEIRVEMNSSPTALD 415
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
+ L R VE E +K++TD +S+ L+++ EL + E V+ + R + E D +
Sbjct: 416 QSNRQLMRLEVE-EAALKQETDEASKK-RLKEVQEELAN-IKEKVNGLNARWKQE-KDAI 471
Query: 137 SCVHDAKRVKDYSK---------------------ILDQIDARV--------HGKFKEKL 167
+ D K+ D ++ + Q++A + H +
Sbjct: 472 QKIGDKKKQLDQARNDLKQAENDYDLNKAAVLQHGTIPQLEADLKKLEENDQHADWLVSE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V +EIA+V S+ TGIP + ++ + + L KRV GQN+A+ + +A+ + +A
Sbjct: 532 SVTADEIAKVVSRETGIPVTKLVEGERQKLLHLADNLHKRVIGQNEAVTAVSDAVIRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++NH++ DM Y E ES+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSENHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVL--DDGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L + + E ++ +V+++ + FKP L +D +
Sbjct: 705 QGRTIDFKNTILIMTSNLGSDILLEGTDENGIISDNAKKQVDQLLKASFKPEFLNRIDDV 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|86148867|ref|ZP_01067123.1| ClpB protein, partial [Vibrio sp. MED222]
gi|85833345|gb|EAQ51547.1| ClpB protein [Vibrio sp. MED222]
Length = 757
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 261 HHVEITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 318
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L E+ + S + LR + +EL + F EL +K
Sbjct: 319 IIQLKIEQQALTNENDEASEK--RLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIK 376
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E + V EI
Sbjct: 377 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEI 436
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
A+V SK TGIP S +E+ ++++G L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 437 ADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRA---GLSD 493
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+ +
Sbjct: 494 PNKPIGSFLFLGPTGVGKTELCKTLANFMFDSED---AMVRIDMSEFMEKHSVARLVGAP 550
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 551 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 608
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV G F+P L +D+ VV
Sbjct: 609 FRNTVVIMTSNLGSTRIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVV 662
>gi|331658742|ref|ZP_08359684.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
gi|419912524|ref|ZP_14430975.1| protein disaggregation chaperone [Escherichia coli KD1]
gi|432899701|ref|ZP_20110253.1| chaperone ClpB [Escherichia coli KTE192]
gi|433029525|ref|ZP_20217380.1| chaperone ClpB [Escherichia coli KTE109]
gi|331053324|gb|EGI25353.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
gi|388391521|gb|EIL52984.1| protein disaggregation chaperone [Escherichia coli KD1]
gi|431425234|gb|ELH07305.1| chaperone ClpB [Escherichia coli KTE192]
gi|431542333|gb|ELI17504.1| chaperone ClpB [Escherichia coli KTE109]
Length = 857
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D +I DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMIRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLDVVSHNFRPEFINRIDEVVV 762
>gi|331684248|ref|ZP_08384840.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
gi|387617905|ref|YP_006120927.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
857C]
gi|450191583|ref|ZP_21891282.1| protein disaggregation chaperone [Escherichia coli SEPT362]
gi|312947166|gb|ADR27993.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
857C]
gi|331077863|gb|EGI49069.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
gi|449319227|gb|EMD09281.1| protein disaggregation chaperone [Escherichia coli SEPT362]
Length = 857
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D +I DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMIRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|289661674|ref|ZP_06483255.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289667092|ref|ZP_06488167.1| ATP-dependent Clp protease [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 861
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 201/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVSRLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|170765528|ref|ZP_02900339.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
gi|170124674|gb|EDS93605.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
Length = 857
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D +I DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMIRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|227510297|ref|ZP_03940346.1| S14 family endopeptidase Clp [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227189949|gb|EEI70016.1| S14 family endopeptidase Clp [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 869
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 60/422 (14%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
LE H ++I D AL A++++ R L ++ ID++ + + LD
Sbjct: 358 GLEIHHGVRIHDNALVAAAKLSD--RYITDRNLPDKAIDLVDEASAEIRVEMNSSPTALD 415
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
+ L R VE E +K++TD +S+ L+++ EL + E V+ + R + E D +
Sbjct: 416 QSNRQLMRLEVE-EAALKQETDEASKK-RLKEVQEELAN-IKEKVNGLNARWKQE-KDAI 471
Query: 137 SCVHDAKRVKDYSK---------------------ILDQIDARV--------HGKFKEKL 167
+ D K+ D ++ + Q++A + H +
Sbjct: 472 QKIGDKKKQLDQARNDLKQAENDYDLNKAAVLQHGTIPQLEADLKKLEENDQHADWLVSE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V +EIA+V S+ TGIP + ++ + + L KRV GQN+A+ + +A+ + +A
Sbjct: 532 SVTADEIAKVVSRETGIPVTKLVEGERQKLLHLADNLHKRVIGQNEAVTAVSDAVIRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++NH++ DM Y E ES+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSENHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVL--DDGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L + + E ++ +V+++ + FKP L +D +
Sbjct: 705 QGRTIDFKNTILIMTSNLGSDILLEGTDENGIISDNAKKQVDQLLKASFKPEFLNRIDDV 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|343492233|ref|ZP_08730606.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
gi|342827573|gb|EGU61961.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
Length = 858
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELVSFVK 125
+ + +E + LV E D SS+ L+ +++EL++ A +K
Sbjct: 419 IIQLKIEQQALVNEHDDASSK--RLKALNSELEEKERDYSELEEIWKAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E K V EI
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVSDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 AEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQQEAVEVVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +A+ ++D+ D ++ DM + E S+ +
Sbjct: 594 PNKPIGSFLFLGPTGVGKTELCKTLASFMFDSEDA---MVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSSRIQENFATLDYDGMKEEVMEVVSKHFRPEFLNRVDESVV 762
>gi|227524448|ref|ZP_03954497.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
hilgardii ATCC 8290]
gi|227088407|gb|EEI23719.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
hilgardii ATCC 8290]
Length = 869
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 60/422 (14%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
LE H ++I D AL A++++ R L ++ ID++ + + LD
Sbjct: 358 GLEIHHGVRIHDNALVAAAKLSD--RYITDRNLPDKAIDLVDEASAEIRVEMNSSPTALD 415
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
+ L R VE E +K++TD +S+ L+++ EL + E V+ + R + E D +
Sbjct: 416 QSNRQLMRLEVE-EAALKQETDEASKK-RLKEVQEELAN-IKEKVNGLNARWKQE-KDAI 471
Query: 137 SCVHDAKRVKDYSK---------------------ILDQIDARV--------HGKFKEKL 167
+ D K+ D ++ + Q++A + H +
Sbjct: 472 QKIGDKKKQLDQARNDLKQAENDYDLNKAAVLQHGTIPQLEADLKKMEENDQHADWLVSE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V +EIA+V S+ TGIP + ++ + + L KRV GQN+A+ + +A+ + +A
Sbjct: 532 SVTADEIAKVVSRETGIPVTKLVEGERQKLLHLADNLHKRVIGQNEAVTAVSDAVIRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++NH++ DM Y E ES+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSENHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVL--DDGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L + + E ++ +V+++ + FKP L +D +
Sbjct: 705 QGRTIDFKNTILIMTSNLGSDILLEGTDENGIISDNAKKQVDQLLKASFKPEFLNRIDDV 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|429087804|ref|ZP_19150536.1| ClpB protein [Cronobacter universalis NCTC 9529]
gi|426507607|emb|CCK15648.1| ClpB protein [Cronobacter universalis NCTC 9529]
Length = 857
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 232/501 (46%), Gaps = 84/501 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L +++EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVSRMLESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVVIDL 394
D NT++IMTS+L + + E Y + E V G F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVVFH- 764
Query: 395 AVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG------ 448
PL + + + +R D VHI+ +A + G+NG
Sbjct: 765 --PLGQQHIASIAQIQLQRLYQRLEDRGYA---------VHISDDALQLLGENGYDPVYG 813
Query: 449 -EGLKRWMDQR---PSADHVI 465
LKR + Q+ P A ++
Sbjct: 814 ARPLKRAIQQQIENPLAQQIL 834
>gi|293411983|ref|ZP_06654706.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
gi|291468754|gb|EFF11245.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
Length = 861
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D +I DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMIRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 766
>gi|294634722|ref|ZP_06713253.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451966850|ref|ZP_21920100.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
gi|291091852|gb|EFE24413.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451314387|dbj|GAC65462.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
Length = 857
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 204/418 (48%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------L 126
L R +++ +Q +K+++D +S+ L +++EL++ + S +
Sbjct: 415 LERRIIQLKLEQQALKKESDEASKK-RLEILNSELEEKERDYASLEEEWKAEKAALTGTQ 473
Query: 127 RMQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL---AVD 170
++ E + + A+R D Y K+ D Q + GK + L D
Sbjct: 474 NIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQSATQAEGKSMKLLRNKVTD 533
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
VE IAEV ++ TGIP S E+ +R++ L KRV GQN+A++ + A+ + +A
Sbjct: 534 VE-IAEVLARWTGIPVSRMLEGEREKLLRMEDELHKRVVGQNEAVEAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E S+
Sbjct: 590 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + + +YG + E+ S+ F+P + +D+ VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQDRFGELSYGEMKELVMSVVTHHFRPEFINRIDETVV 762
>gi|422369617|ref|ZP_16450017.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
gi|315298640|gb|EFU57895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
Length = 861
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D +I DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMIRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLDVVSHNFRPEFINRIDEVVV 766
>gi|417140198|ref|ZP_11983448.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
gi|417311067|ref|ZP_12097861.1| Chaperone protein ClpB [Escherichia coli PCN033]
gi|417690778|ref|ZP_12339998.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
gi|332088101|gb|EGI93226.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
gi|338767303|gb|EGP22129.1| Chaperone protein ClpB [Escherichia coli PCN033]
gi|386156321|gb|EIH12666.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
Length = 857
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + ++ ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEVATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|415845853|ref|ZP_11525254.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
gi|417582098|ref|ZP_12232899.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
gi|417756847|ref|ZP_12404920.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
gi|418041510|ref|ZP_12679732.1| protein disaggregation chaperone [Escherichia coli W26]
gi|419019520|ref|ZP_13566825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
gi|419035734|ref|ZP_13582819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
gi|419115980|ref|ZP_13660995.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
gi|419403099|ref|ZP_13943819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
gi|420327113|ref|ZP_14828859.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
gi|420354031|ref|ZP_14855128.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
gi|420364479|ref|ZP_14865357.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
gi|420392397|ref|ZP_14891648.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
gi|323167772|gb|EFZ53467.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
gi|345335555|gb|EGW67992.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
gi|377859211|gb|EHU24045.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
gi|377873032|gb|EHU37672.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
gi|377878905|gb|EHU43484.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
gi|377959332|gb|EHV22828.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
gi|378245354|gb|EHY05291.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
gi|383475594|gb|EID67551.1| protein disaggregation chaperone [Escherichia coli W26]
gi|391248417|gb|EIQ07658.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
gi|391277052|gb|EIQ35812.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
gi|391293394|gb|EIQ51676.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
gi|391312164|gb|EIQ69787.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
Length = 823
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 384
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 385 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 442
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 443 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 502
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 503 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 559
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 560 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 616
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 617 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 674
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 675 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 728
>gi|418257812|ref|ZP_12881289.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
gi|397896131|gb|EJL12551.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
Length = 823
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 384
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 385 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 442
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 443 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 502
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 503 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 559
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 560 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 616
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 617 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 674
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 675 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 728
>gi|297564892|ref|YP_003683864.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
gi|296849341|gb|ADH62356.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
Length = 855
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 43/321 (13%)
Query: 129 QVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARV--------HGKFKEKLAVDVEE 173
Q D+ + + A+R D +K L +++ARV + KF +L V E+
Sbjct: 468 QQRLDEVRTSIEQAERAYDLNKAAELRYGELPRLEARVKELSEQLRNAKFV-RLEVTEED 526
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V S+ TGIP + E+ +R++ + KRV GQ++AI + +A+ + +A K
Sbjct: 527 IAQVVSRWTGIPVAKLLEGEREKLLRLEEEMHKRVVGQDEAIVAVADAIRRARAGLK--D 584
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK ELAK +A +L+D +N ++ DM Y E ++ +
Sbjct: 585 PNRPIGSFLFLGPTGVGKTELAKTLAAQLFDTEEN---MVRIDMSEYQEKHTVARLIGAP 641
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+LFD+IEKA+ + N+LL+IL D R D
Sbjct: 642 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQIL--DDGRLTDGQGRTVD 699
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTA-----TYGRVNEVTGSLFKPSLLKLLDKLVVIDLAV 396
NT+II+TS+L + E + RV EV F+P L LD++VV
Sbjct: 700 FRNTVIILTSNLGSPLILEGIQAGLPYETIRNRVFEVLQKNFRPEFLNRLDEIVVFK--- 756
Query: 397 PLLDTTRLLLREWACEETKRR 417
PL + E E +RR
Sbjct: 757 PLTQEQIAQIVEIQLEGLRRR 777
>gi|404379863|ref|ZP_10984912.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
gi|294484380|gb|EFG32063.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
Length = 857
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 195/415 (46%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGVDITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + KE D S + L ID E+ E ++ ++
Sbjct: 419 IIQLQMEKMHVAKETDDASKKRLAL--IDEEIASLQKEYADLDEIWKAEKAASSSSADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSK-----------ILDQIDAR-VHGKFKE----KLAVDVEE 173
+ DD + AKR DY+K + Q+ A V G K + V EE
Sbjct: 477 KQIDDLKLKIEQAKRAGDYAKASELEYGQLPNLTQQLQAADVSGSLKTNKLFRTQVGAEE 536
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAE+ S++TGIP S ++ ++++ L KRV GQ++A+ + +A+ + ++ GL+
Sbjct: 537 IAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHKRVIGQDEAVRAVADAIRR---SRSGLA 593
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ G FLF GP GK EL K +A+ L+D+ D HLI DM Y E SI +
Sbjct: 594 DPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSED---HLIRIDMSEYMEKHSIARLIGA 650
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 PPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + T+ Y V E + F+P L+ +D++VV
Sbjct: 709 DFKNTVIVMTSNIGSQNIQNMGDTSDYDAVKAAVMEDVKAYFRPELINRIDEVVV 763
>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
Length = 865
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 197/424 (46%), Gaps = 68/424 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+R++ R +L ++ ID++ + R D +E+D+
Sbjct: 361 HGVDITDGAIIAAARLSH--RYITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-LRQIDNELKDAFFELVSF-----VKLRMQVEYDDF 135
L + +E E L KED D S + L +EL+ + +L L+ EY
Sbjct: 419 LIQLKMEREALRKEDDDASRKRLEKLEDEIDELEKEYADLEEIWQAEKAALQGAAEYKAE 478
Query: 136 VSC----VHDAKRVKDYS---------------KILDQIDARVHGKFKEKL---AVDVEE 173
+ + A+R D S K+ D D + + +L V EE
Sbjct: 479 LEQARVELEQARRAGDLSRMSELQYGEIPELEKKVQDAQDREEQAQTETQLLRNKVTDEE 538
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV +K TGIP S +++ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 539 IAEVVAKWTGIPVSKMLEGEKDKLLRMEDALHDRVVGQNEAVEAVANAVRRSRA---GLS 595
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+AN L+ D + ++ DM + E S+ +
Sbjct: 596 DPNRPNGSFLFLGPTGVGKTELCKALANFLF---DTEEAMVRIDMSEFMEKHSVARLVGA 652
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 653 PPGYVGYEEGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 710
Query: 341 DLTNTLIIMTSDLKDEQV-------------YEVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+++MTS+L + + YE M +A V EV G+ F+P L +D
Sbjct: 711 DFRNTVVVMTSNLGSDLIQKLAGSDAESASDYETMKSA----VMEVVGNHFRPEFLNRVD 766
Query: 388 KLVV 391
+ VV
Sbjct: 767 ETVV 770
>gi|425278990|ref|ZP_18670226.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
gi|408200376|gb|EKI25558.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
Length = 798
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 302 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLARR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 360 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 417
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 418 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 478 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 535 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 650 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 703
>gi|432481938|ref|ZP_19723893.1| chaperone ClpB [Escherichia coli KTE210]
gi|431006460|gb|ELD21466.1| chaperone ClpB [Escherichia coli KTE210]
Length = 857
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|407070078|ref|ZP_11100916.1| chaperone ClpB protein [Vibrio cyclitrophicus ZF14]
Length = 857
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L E+ + S + LR + +EL D F EL +K
Sbjct: 419 IIQLKIEQQALTNENDEASEK--RLRTLQSELSDKERDFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D DF D R+ + Y +I + Q+D + +E + V EI
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
A+V SK TGIP S +E+ ++++G L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 ADVLSKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNKPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V EV F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSSRIQENFNTLDYQGIKNEVMEVVSKHFRPEFLNRVDESVV 762
>gi|420338046|ref|ZP_14839608.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
gi|391259920|gb|EIQ18994.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
Length = 823
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 384
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 385 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 442
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 443 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 502
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 503 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 559
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 560 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 616
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 617 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 674
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 675 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 728
>gi|417729516|ref|ZP_12378211.1| chaperone protein clpB [Shigella flexneri K-671]
gi|419192641|ref|ZP_13736093.1| chaperone protein ClpB [Escherichia coli DEC7E]
gi|332754018|gb|EGJ84390.1| chaperone protein clpB [Shigella flexneri K-671]
gi|378037994|gb|EHW00516.1| chaperone protein ClpB [Escherichia coli DEC7E]
Length = 678
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 182 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 239
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 240 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 297
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 298 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 357
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 358 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 414
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 415 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 471
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 472 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 529
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 530 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 583
>gi|218559513|ref|YP_002392426.1| protein disaggregation chaperone [Escherichia coli S88]
gi|386600563|ref|YP_006102069.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
gi|386603372|ref|YP_006109672.1| protein disaggregation chaperone [Escherichia coli UM146]
gi|417086020|ref|ZP_11953301.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
gi|419944842|ref|ZP_14461312.1| protein disaggregation chaperone [Escherichia coli HM605]
gi|422750407|ref|ZP_16804318.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
gi|422754665|ref|ZP_16808491.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
gi|422840557|ref|ZP_16888527.1| chaperone ClpB [Escherichia coli H397]
gi|432358930|ref|ZP_19602149.1| chaperone ClpB [Escherichia coli KTE4]
gi|432363690|ref|ZP_19606853.1| chaperone ClpB [Escherichia coli KTE5]
gi|432575473|ref|ZP_19811946.1| chaperone ClpB [Escherichia coli KTE55]
gi|432588871|ref|ZP_19825226.1| chaperone ClpB [Escherichia coli KTE58]
gi|432598715|ref|ZP_19834988.1| chaperone ClpB [Escherichia coli KTE62]
gi|432755423|ref|ZP_19989970.1| chaperone ClpB [Escherichia coli KTE22]
gi|432779502|ref|ZP_20013725.1| chaperone ClpB [Escherichia coli KTE59]
gi|432788495|ref|ZP_20022624.1| chaperone ClpB [Escherichia coli KTE65]
gi|432821941|ref|ZP_20055631.1| chaperone ClpB [Escherichia coli KTE118]
gi|432823429|ref|ZP_20057112.1| chaperone ClpB [Escherichia coli KTE123]
gi|433006053|ref|ZP_20194480.1| chaperone ClpB [Escherichia coli KTE227]
gi|433008648|ref|ZP_20197063.1| chaperone ClpB [Escherichia coli KTE229]
gi|433154671|ref|ZP_20339608.1| chaperone ClpB [Escherichia coli KTE176]
gi|433164483|ref|ZP_20349217.1| chaperone ClpB [Escherichia coli KTE179]
gi|433169557|ref|ZP_20354181.1| chaperone ClpB [Escherichia coli KTE180]
gi|218366282|emb|CAR04034.1| protein disaggregation chaperone [Escherichia coli S88]
gi|294493689|gb|ADE92445.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
gi|307625856|gb|ADN70160.1| protein disaggregation chaperone [Escherichia coli UM146]
gi|323951207|gb|EGB47083.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
gi|323957039|gb|EGB52765.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
gi|355350857|gb|EHG00053.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
gi|371605986|gb|EHN94588.1| chaperone ClpB [Escherichia coli H397]
gi|388417427|gb|EIL77270.1| protein disaggregation chaperone [Escherichia coli HM605]
gi|430875662|gb|ELB99184.1| chaperone ClpB [Escherichia coli KTE4]
gi|430885121|gb|ELC08048.1| chaperone ClpB [Escherichia coli KTE5]
gi|431105099|gb|ELE09445.1| chaperone ClpB [Escherichia coli KTE55]
gi|431119264|gb|ELE22272.1| chaperone ClpB [Escherichia coli KTE58]
gi|431129647|gb|ELE31760.1| chaperone ClpB [Escherichia coli KTE62]
gi|431301516|gb|ELF90722.1| chaperone ClpB [Escherichia coli KTE22]
gi|431325766|gb|ELG13144.1| chaperone ClpB [Escherichia coli KTE59]
gi|431336292|gb|ELG23411.1| chaperone ClpB [Escherichia coli KTE65]
gi|431367010|gb|ELG53496.1| chaperone ClpB [Escherichia coli KTE118]
gi|431379087|gb|ELG64023.1| chaperone ClpB [Escherichia coli KTE123]
gi|431513111|gb|ELH91196.1| chaperone ClpB [Escherichia coli KTE227]
gi|431522833|gb|ELH99978.1| chaperone ClpB [Escherichia coli KTE229]
gi|431672931|gb|ELJ39163.1| chaperone ClpB [Escherichia coli KTE176]
gi|431685703|gb|ELJ51270.1| chaperone ClpB [Escherichia coli KTE179]
gi|431686554|gb|ELJ52115.1| chaperone ClpB [Escherichia coli KTE180]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|417282105|ref|ZP_12069405.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
gi|386246434|gb|EII88164.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLARR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|422792066|ref|ZP_16844768.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
gi|323971463|gb|EGB66699.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
Length = 809
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 313 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 370
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 371 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 428
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 429 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 488
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 489 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 545
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 546 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 602
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 603 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 660
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 661 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 714
>gi|387868692|ref|YP_005700161.1| chaperone ClpB [Edwardsiella tarda FL6-60]
gi|304560005|gb|ADM42669.1| ClpB [Edwardsiella tarda FL6-60]
Length = 809
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+
Sbjct: 313 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDR---- 366
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------L 126
L R +++ +Q +K+++D +S+ L ++ EL++ + S +
Sbjct: 367 LERRIIQLKLEQQALKKESDEASKK-RLEILNTELEEKERDYASLEEEWKAEKAALTGTQ 425
Query: 127 RMQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL---AVD 170
++ E + + A+R D Y K+ D Q + GK + L D
Sbjct: 426 NIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQAATQAEGKSMKLLRNKVTD 485
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
VE IAEV ++ TGIP S E+ +R++ L +RV GQN+A++ + A+ + +A
Sbjct: 486 VE-IAEVLARWTGIPVSRMLEGEREKLLRMEDELHRRVIGQNEAVEAVSNAIRRSRA--- 541
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN L+D++D ++ DM + E S+
Sbjct: 542 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA---MVRIDMSEFMEKHSVSRL 598
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 599 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 656
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + + +YG + E+ S+ F+P + +D+ VV
Sbjct: 657 RTVDFRNTVVIMTSNLGSDLIQDRFGDLSYGEMKELVMSVVTHHFRPEFINRIDETVV 714
>gi|417708677|ref|ZP_12357705.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
gi|420332545|ref|ZP_14834195.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
gi|332999364|gb|EGK18949.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
gi|391249376|gb|EIQ08611.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|365101806|ref|ZP_09332436.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
gi|363647356|gb|EHL86585.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + + V + F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSNNFRPEFINRIDEVVV 762
>gi|390940588|ref|YP_006404325.1| chaperone ATPase [Sulfurospirillum barnesii SES-3]
gi|390193695|gb|AFL68750.1| ATPase with chaperone activity, ATP-binding subunit
[Sulfurospirillum barnesii SES-3]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 201/424 (47%), Gaps = 63/424 (14%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
SLE H + I D AL A++++ R + L ++ ID++ + + EL
Sbjct: 356 SLEAHHHVTIMDSALIAAAKLS--ARYISDRFLPDKAIDLIDEASAELKMQIESEPTELS 413
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE---YD 133
+ K + +VE E L+ E + L+ I+ EL DA E + ++++ + E ++
Sbjct: 414 RIKRVIGTLMVEKEALLMEKNKKNDER--LQSIEKELSDAK-EKRNSLEIQFETEKSVFN 470
Query: 134 DFVSCVHDAKRVK------------------DYSKILDQIDARVHGKFK-EKL------- 167
D S DA+ ++ +Y K+ D + K K EK+
Sbjct: 471 DIASLKTDAEALRREAETAKKNSDFNKAAEIEYGKLPDLLKQEEELKVKWEKMVESGTLL 530
Query: 168 --AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
+VD E IA + SK TGIP + + + + V+ LKK V GQ++AI I A+ +
Sbjct: 531 KNSVDEEMIATIVSKWTGIPVTKMLQSEKAKVLHVEEYLKKEVVGQDEAIKAIGRAIKRN 590
Query: 226 KAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELE 284
KA GLS + + +G FLF GP GK + AKA+AN L+D LI FDM Y E
Sbjct: 591 KA---GLSEQSKPIGSFLFLGPTGVGKTQSAKALANFLFDTT---KALIRFDMSEYMEKH 644
Query: 285 SIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRK 332
S+ + L V+++PYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 645 SVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVL--DEGRL 702
Query: 333 ATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKL 389
D NT+II+TS++ ++ +M R EV L FKP L LD +
Sbjct: 703 TDNKGVTVDFKNTIIILTSNIASDK---IMAYEGEKRTEEVMKELRTHFKPEFLNRLDDI 759
Query: 390 VVID 393
++ +
Sbjct: 760 IIFN 763
>gi|269140172|ref|YP_003296873.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
gi|267985833|gb|ACY85662.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------L 126
L R +++ +Q +K+++D +S+ L ++ EL++ + S +
Sbjct: 415 LERRIIQLKLEQQALKKESDEASKK-RLEILNTELEEKERDYASLEEEWKAEKAALTGTQ 473
Query: 127 RMQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL---AVD 170
++ E + + A+R D Y K+ D Q + GK + L D
Sbjct: 474 NIKAEIEQAKIALEQARRSGDLAQMSEIQYGKLPDLEKQLQAATQAEGKSMKLLRNKVTD 533
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
VE IAEV ++ TGIP S E+ +R++ L +RV GQN+A++ + A+ + +A
Sbjct: 534 VE-IAEVLARWTGIPVSRMLEGEREKLLRMEDELHRRVIGQNEAVEAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN L+D++D ++ DM + E S+
Sbjct: 590 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA---MVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + + +YG + E+ S+ F+P + +D+ VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQDRFGDLSYGEMKELVMSVVTHHFRPEFINRIDETVV 762
>gi|147365|gb|AAA24422.1| ATP-dependent protease binding subunit [Escherichia coli]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|30063993|ref|NP_838164.1| protein disaggregation chaperone [Shigella flexneri 2a str. 2457T]
gi|110806537|ref|YP_690057.1| protein disaggregation chaperone [Shigella flexneri 5 str. 8401]
gi|384544218|ref|YP_005728281.1| Chaperone protein clpB [Shigella flexneri 2002017]
gi|415857540|ref|ZP_11532240.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
gi|417704449|ref|ZP_12353544.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
gi|417724281|ref|ZP_12373083.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
gi|417734715|ref|ZP_12383363.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
gi|417739488|ref|ZP_12388064.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
gi|424838928|ref|ZP_18263565.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
gi|30042249|gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str. 2457T]
gi|110616085|gb|ABF04752.1| heat shock protein [Shigella flexneri 5 str. 8401]
gi|281602004|gb|ADA74988.1| Chaperone protein clpB [Shigella flexneri 2002017]
gi|313648272|gb|EFS12716.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
gi|332753866|gb|EGJ84243.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
gi|332755659|gb|EGJ86022.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
gi|332997821|gb|EGK17431.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
gi|333015833|gb|EGK35169.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
gi|383467980|gb|EID63001.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|420321790|ref|ZP_14823615.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
gi|391247097|gb|EIQ06353.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|422970256|ref|ZP_16974049.1| chaperone ClpB [Escherichia coli TA124]
gi|371600634|gb|EHN89406.1| chaperone ClpB [Escherichia coli TA124]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|300722275|ref|YP_003711559.1| ATP-dependent protease [Xenorhabdus nematophila ATCC 19061]
gi|297628776|emb|CBJ89354.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus nematophila ATCC
19061]
Length = 857
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 129/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S +++ +R++ L KRV GQN+A+D + A+ + +A GL
Sbjct: 535 EIAEILARWTGIPVSRMLESEKDKLLRMEQELHKRVIGQNEAVDAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G F+F GP GK EL KA+AN L+ D+D+ ++ DM + E S+
Sbjct: 592 SDPNRPIGSFMFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E + Y V EV G F+P + +D++VV
Sbjct: 707 IDFRNTVVIMTSNLGSDMIQERFGSLDYAGMKDMVMEVVGHHFRPEFINRIDEIVV 762
>gi|417286004|ref|ZP_12073295.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
gi|386251245|gb|EII97412.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|419244574|ref|ZP_13787210.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
gi|378089111|gb|EHW50958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|415811834|ref|ZP_11504147.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
gi|417239377|ref|ZP_12036393.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
gi|417278141|ref|ZP_12065457.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
gi|417624590|ref|ZP_12274887.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
gi|417673475|ref|ZP_12322927.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
gi|417683458|ref|ZP_12332805.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
gi|417829028|ref|ZP_12475576.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
gi|419166727|ref|ZP_13711175.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
gi|419216869|ref|ZP_13759866.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
gi|419224608|ref|ZP_13767506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
gi|419266272|ref|ZP_13808641.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
gi|419303539|ref|ZP_13845514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
gi|419350701|ref|ZP_13892036.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
gi|419356154|ref|ZP_13897407.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
gi|419361218|ref|ZP_13902434.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
gi|419366349|ref|ZP_13907507.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
gi|419813247|ref|ZP_14338100.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
gi|420348871|ref|ZP_14850253.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
gi|420361393|ref|ZP_14862332.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
gi|420381868|ref|ZP_14881308.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
gi|421683751|ref|ZP_16123542.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
gi|424533509|ref|ZP_17976866.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
gi|424540920|ref|ZP_17983849.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
gi|425111332|ref|ZP_18513257.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
gi|425157267|ref|ZP_18556537.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
gi|425175429|ref|ZP_18573554.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
gi|425200975|ref|ZP_18597189.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
gi|425289734|ref|ZP_18680570.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
gi|425301446|ref|ZP_18691335.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
gi|425318562|ref|ZP_18707358.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
gi|429015806|ref|ZP_19082708.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
gi|429027740|ref|ZP_19093752.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
gi|323173093|gb|EFZ58724.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
gi|332089246|gb|EGI94353.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
gi|332091986|gb|EGI97064.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
gi|335574327|gb|EGM60653.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
gi|345376356|gb|EGX08294.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
gi|378006469|gb|EHV69452.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
gi|378060300|gb|EHW22496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
gi|378084050|gb|EHW45977.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
gi|378115045|gb|EHW76594.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
gi|378143617|gb|EHX04808.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
gi|378199027|gb|EHX59495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
gi|378199229|gb|EHX59695.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
gi|378202339|gb|EHX62777.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
gi|378211840|gb|EHX72173.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
gi|385153935|gb|EIF15958.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
gi|386213111|gb|EII23544.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
gi|386239109|gb|EII76043.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
gi|390860758|gb|EIP23050.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
gi|390862609|gb|EIP24785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
gi|391267912|gb|EIQ26843.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
gi|391277116|gb|EIQ35872.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
gi|391299375|gb|EIQ57339.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
gi|404337631|gb|EJZ64082.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
gi|408069291|gb|EKH03682.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
gi|408090876|gb|EKH24129.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
gi|408114538|gb|EKH46076.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
gi|408212539|gb|EKI37061.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
gi|408212633|gb|EKI37150.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
gi|408237828|gb|EKI60673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
gi|408550250|gb|EKK27588.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
gi|427260741|gb|EKW26705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
gi|427278327|gb|EKW42792.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
Length = 798
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 302 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 360 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 417
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 418 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 478 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 535 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 650 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 703
>gi|300825131|ref|ZP_07105224.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
gi|300522403|gb|EFK43472.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
Length = 861
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKEHQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 766
>gi|218547885|ref|YP_002381676.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
35469]
gi|422807810|ref|ZP_16856238.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
gi|218355426|emb|CAQ88034.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
35469]
gi|324111233|gb|EGC05215.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|331654052|ref|ZP_08355052.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
gi|331047434|gb|EGI19511.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
Length = 861
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 766
>gi|312973164|ref|ZP_07787337.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
gi|310333106|gb|EFQ00320.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
Length = 798
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 302 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 360 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKTEKASLSGTQTIK 417
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 418 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 478 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 535 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 650 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 703
>gi|240949095|ref|ZP_04753443.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
gi|240296490|gb|EER47122.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 26/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +++ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMIEGEKDKLLRMENVLHTRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + E M A+YG + EV S+ F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQE-MPNASYGELKEVVMSVVSQHFRPEFINRIDETVV 761
>gi|91211926|ref|YP_541912.1| protein disaggregation chaperone [Escherichia coli UTI89]
gi|117624816|ref|YP_853729.1| protein disaggregation chaperone [Escherichia coli APEC O1]
gi|237706819|ref|ZP_04537300.1| heat shock protein [Escherichia sp. 3_2_53FAA]
gi|422361379|ref|ZP_16442005.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
gi|91073500|gb|ABE08381.1| heat shock protein [Escherichia coli UTI89]
gi|115513940|gb|ABJ02015.1| heat shock protein [Escherichia coli APEC O1]
gi|226899859|gb|EEH86118.1| heat shock protein [Escherichia sp. 3_2_53FAA]
gi|315284809|gb|EFU44254.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
Length = 861
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 766
>gi|429105773|ref|ZP_19167642.1| ClpB protein [Cronobacter malonaticus 681]
gi|429111337|ref|ZP_19173107.1| ClpB protein [Cronobacter malonaticus 507]
gi|426292496|emb|CCJ93755.1| ClpB protein [Cronobacter malonaticus 681]
gi|426312494|emb|CCJ99220.1| ClpB protein [Cronobacter malonaticus 507]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 228/498 (45%), Gaps = 78/498 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNDELADKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVVIDLAVP 397
NT++IMTS+L + + E Y + E V G F+P + +D++VV P
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVVFH---P 765
Query: 398 LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG-------EG 450
L + + + +R D VHI+ +A + G+NG
Sbjct: 766 LGQQHIASIAQIQLQRLYQRLEDRGYA---------VHISDDALQLLGENGYDPVYGARP 816
Query: 451 LKRWMDQR---PSADHVI 465
LKR + Q+ P A ++
Sbjct: 817 LKRAIQQQIENPLAQQIL 834
>gi|422780508|ref|ZP_16833293.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
gi|323978455|gb|EGB73539.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|15832709|ref|NP_311482.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
Sakai]
gi|16130513|ref|NP_417083.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MG1655]
gi|74313151|ref|YP_311570.1| protein disaggregation chaperone [Shigella sonnei Ss046]
gi|82545045|ref|YP_408992.1| protein disaggregation chaperone [Shigella boydii Sb227]
gi|110642755|ref|YP_670485.1| protein disaggregation chaperone [Escherichia coli 536]
gi|157158232|ref|YP_001463913.1| protein disaggregation chaperone [Escherichia coli E24377A]
gi|157162068|ref|YP_001459386.1| protein disaggregation chaperone [Escherichia coli HS]
gi|168752067|ref|ZP_02777089.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
gi|168758662|ref|ZP_02783669.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
gi|168762385|ref|ZP_02787392.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
gi|168771698|ref|ZP_02796705.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
gi|168773480|ref|ZP_02798487.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
gi|168778570|ref|ZP_02803577.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
gi|168789495|ref|ZP_02814502.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
gi|168801710|ref|ZP_02826717.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
gi|170019129|ref|YP_001724083.1| protein disaggregation chaperone [Escherichia coli ATCC 8739]
gi|170082197|ref|YP_001731517.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. DH10B]
gi|170683980|ref|YP_001744777.1| protein disaggregation chaperone [Escherichia coli SMS-3-5]
gi|188492624|ref|ZP_02999894.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
gi|191169051|ref|ZP_03030814.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
gi|191174569|ref|ZP_03036064.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
gi|193064051|ref|ZP_03045136.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
gi|194430164|ref|ZP_03062665.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
gi|194439334|ref|ZP_03071412.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
gi|195940187|ref|ZP_03085569.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4024]
gi|208805997|ref|ZP_03248334.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
gi|208813052|ref|ZP_03254381.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
gi|208819305|ref|ZP_03259625.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
gi|209397795|ref|YP_002272065.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4115]
gi|209920069|ref|YP_002294153.1| protein disaggregation chaperone [Escherichia coli SE11]
gi|215487931|ref|YP_002330362.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
E2348/69]
gi|217326744|ref|ZP_03442827.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
TW14588]
gi|218555172|ref|YP_002388085.1| protein disaggregation chaperone [Escherichia coli IAI1]
gi|218690711|ref|YP_002398923.1| protein disaggregation chaperone [Escherichia coli ED1a]
gi|218696217|ref|YP_002403884.1| protein disaggregation chaperone [Escherichia coli 55989]
gi|218701104|ref|YP_002408733.1| protein disaggregation chaperone [Escherichia coli IAI39]
gi|218706094|ref|YP_002413613.1| protein disaggregation chaperone [Escherichia coli UMN026]
gi|238901753|ref|YP_002927549.1| protein disaggregation chaperone [Escherichia coli BW2952]
gi|251785915|ref|YP_003000219.1| ClpB chaperone [Escherichia coli BL21(DE3)]
gi|253772512|ref|YP_003035343.1| protein disaggregation chaperone [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162563|ref|YP_003045671.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
gi|254289324|ref|YP_003055072.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
gi|254794540|ref|YP_003079377.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
TW14359]
gi|260845274|ref|YP_003223052.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
str. 12009]
gi|260856682|ref|YP_003230573.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
11368]
gi|260869274|ref|YP_003235676.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
str. 11128]
gi|261227477|ref|ZP_05941758.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255671|ref|ZP_05948204.1| protein disaggregation chaperone ClpB [Escherichia coli O157:H7
str. FRIK966]
gi|297516260|ref|ZP_06934646.1| protein disaggregation chaperone [Escherichia coli OP50]
gi|301024190|ref|ZP_07187897.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
gi|306812488|ref|ZP_07446686.1| protein disaggregation chaperone [Escherichia coli NC101]
gi|307315094|ref|ZP_07594678.1| ATP-dependent chaperone ClpB [Escherichia coli W]
gi|312965507|ref|ZP_07779739.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
gi|331664159|ref|ZP_08365068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
gi|331669344|ref|ZP_08370190.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
gi|331674036|ref|ZP_08374798.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
gi|378711951|ref|YP_005276844.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
gi|383179715|ref|YP_005457720.1| protein disaggregation chaperone [Shigella sonnei 53G]
gi|386281657|ref|ZP_10059317.1| chaperone ClpB [Escherichia sp. 4_1_40B]
gi|386594643|ref|YP_006091043.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
gi|386609990|ref|YP_006125476.1| protein disaggregation chaperone [Escherichia coli W]
gi|386615294|ref|YP_006134960.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
gi|386620191|ref|YP_006139771.1| ClpB protein [Escherichia coli NA114]
gi|386625329|ref|YP_006145057.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
gi|386640115|ref|YP_006106913.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
gi|386700465|ref|YP_006164302.1| protein disaggregation chaperone [Escherichia coli KO11FL]
gi|386705853|ref|YP_006169700.1| Chaperone protein clpB [Escherichia coli P12b]
gi|386710479|ref|YP_006174200.1| protein disaggregation chaperone [Escherichia coli W]
gi|387507957|ref|YP_006160213.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
RM12579]
gi|387608240|ref|YP_006097096.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
gi|387613238|ref|YP_006116354.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
gi|387622288|ref|YP_006129916.1| heat shock protein [Escherichia coli DH1]
gi|387830483|ref|YP_003350420.1| ATP-dependent protease [Escherichia coli SE15]
gi|388478624|ref|YP_490816.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. W3110]
gi|404375936|ref|ZP_10981112.1| chaperone ClpB [Escherichia sp. 1_1_43]
gi|407470487|ref|YP_006783070.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480851|ref|YP_006778000.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481417|ref|YP_006768963.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414577322|ref|ZP_11434499.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
gi|415778701|ref|ZP_11489695.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
gi|415784644|ref|ZP_11492465.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
gi|415822347|ref|ZP_11510975.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
gi|415828630|ref|ZP_11515128.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
gi|416260475|ref|ZP_11640263.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
gi|416279141|ref|ZP_11644813.1| ClpB protein [Shigella boydii ATCC 9905]
gi|416299381|ref|ZP_11652348.1| ClpB protein [Shigella flexneri CDC 796-83]
gi|416307900|ref|ZP_11654808.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
gi|416321751|ref|ZP_11663599.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
gi|416326811|ref|ZP_11666923.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
gi|416336625|ref|ZP_11673095.1| ClpB protein [Escherichia coli WV_060327]
gi|416345929|ref|ZP_11679302.1| ClpB protein [Escherichia coli EC4100B]
gi|416776084|ref|ZP_11874696.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
G5101]
gi|416787728|ref|ZP_11879610.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
493-89]
gi|416799412|ref|ZP_11884525.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
2687]
gi|416809743|ref|ZP_11889208.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
3256-97]
gi|416820392|ref|ZP_11893767.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
5905]
gi|416831290|ref|ZP_11899055.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|416898784|ref|ZP_11928330.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
gi|417115524|ref|ZP_11966660.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
gi|417122593|ref|ZP_11971851.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
gi|417135528|ref|ZP_11980313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
gi|417150815|ref|ZP_11990554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
gi|417154595|ref|ZP_11992724.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
gi|417166450|ref|ZP_11999806.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
gi|417174839|ref|ZP_12004635.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
gi|417184955|ref|ZP_12010451.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
gi|417188936|ref|ZP_12012494.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
gi|417214357|ref|ZP_12022904.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
gi|417222149|ref|ZP_12025589.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
gi|417231520|ref|ZP_12032918.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
gi|417251352|ref|ZP_12043117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
gi|417262165|ref|ZP_12049645.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
gi|417268814|ref|ZP_12056174.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
gi|417272803|ref|ZP_12060152.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
gi|417292279|ref|ZP_12079560.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
gi|417299788|ref|ZP_12087015.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
(10e)]
gi|417587600|ref|ZP_12238367.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
gi|417592929|ref|ZP_12243624.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
gi|417597900|ref|ZP_12248535.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
gi|417603264|ref|ZP_12253832.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
gi|417609221|ref|ZP_12259723.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
gi|417614061|ref|ZP_12264518.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
gi|417619179|ref|ZP_12269592.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
gi|417631236|ref|ZP_12281469.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
gi|417635568|ref|ZP_12285779.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
gi|417640347|ref|ZP_12290487.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
gi|417663139|ref|ZP_12312720.1| ClpB protein [Escherichia coli AA86]
gi|417667996|ref|ZP_12317540.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
gi|417713893|ref|ZP_12362856.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
gi|417718518|ref|ZP_12367412.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
gi|417806140|ref|ZP_12453086.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
LB226692]
gi|417833888|ref|ZP_12480335.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
01-09591]
gi|417943982|ref|ZP_12587227.1| protein disaggregation chaperone [Escherichia coli XH140A]
gi|417978062|ref|ZP_12618836.1| protein disaggregation chaperone [Escherichia coli XH001]
gi|418267386|ref|ZP_12886607.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
gi|418304087|ref|ZP_12915881.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
gi|418944161|ref|ZP_13497263.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
T22]
gi|418957031|ref|ZP_13508956.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
gi|418998025|ref|ZP_13545616.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
gi|419003146|ref|ZP_13550669.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
gi|419008833|ref|ZP_13556262.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
gi|419014504|ref|ZP_13561851.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
gi|419025019|ref|ZP_13572244.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
gi|419030056|ref|ZP_13577216.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
gi|419040762|ref|ZP_13587786.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
gi|419045837|ref|ZP_13592780.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
gi|419048721|ref|ZP_13595643.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
gi|419056229|ref|ZP_13603069.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
gi|419065813|ref|ZP_13612510.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
gi|419070710|ref|ZP_13616330.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
gi|419074940|ref|ZP_13620486.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
gi|419081790|ref|ZP_13627237.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
gi|419085877|ref|ZP_13631255.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
gi|419094680|ref|ZP_13639956.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
gi|419099393|ref|ZP_13644589.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
gi|419105595|ref|ZP_13650721.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
gi|419112772|ref|ZP_13657812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
gi|419121670|ref|ZP_13666618.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
gi|419127131|ref|ZP_13672012.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
gi|419132616|ref|ZP_13677451.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
gi|419137752|ref|ZP_13682543.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
gi|419143546|ref|ZP_13688283.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
gi|419149752|ref|ZP_13694404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
gi|419155000|ref|ZP_13699560.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
gi|419160287|ref|ZP_13704791.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
gi|419171261|ref|ZP_13715147.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
gi|419175974|ref|ZP_13719790.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
gi|419181894|ref|ZP_13725506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
gi|419187344|ref|ZP_13730855.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
gi|419200632|ref|ZP_13743898.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
gi|419203059|ref|ZP_13746263.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
gi|419210823|ref|ZP_13753899.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
gi|419219050|ref|ZP_13762016.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
gi|419233674|ref|ZP_13776447.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
gi|419238960|ref|ZP_13781674.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
gi|419250237|ref|ZP_13792815.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
gi|419256078|ref|ZP_13798590.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
gi|419262386|ref|ZP_13804799.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
gi|419273828|ref|ZP_13816122.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
gi|419278381|ref|ZP_13820632.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
gi|419285292|ref|ZP_13827462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
gi|419290582|ref|ZP_13832671.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
gi|419295915|ref|ZP_13837958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
gi|419307494|ref|ZP_13849392.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
gi|419312508|ref|ZP_13854369.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
gi|419317886|ref|ZP_13859688.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
gi|419324074|ref|ZP_13865766.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
gi|419330102|ref|ZP_13871703.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
gi|419335677|ref|ZP_13877199.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
gi|419341032|ref|ZP_13882495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
gi|419346241|ref|ZP_13887613.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
gi|419371080|ref|ZP_13912196.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
gi|419376528|ref|ZP_13917551.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
gi|419381863|ref|ZP_13922812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
gi|419387210|ref|ZP_13928085.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
gi|419392708|ref|ZP_13933514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
gi|419397694|ref|ZP_13938462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
gi|419408266|ref|ZP_13948952.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
gi|419413747|ref|ZP_13954398.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
gi|419701433|ref|ZP_14229033.1| protein disaggregation chaperone [Escherichia coli SCI-07]
gi|419806263|ref|ZP_14331376.1| protein disaggregation chaperone [Escherichia coli AI27]
gi|419865985|ref|ZP_14388357.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
CVM9340]
gi|419872055|ref|ZP_14394099.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
CVM9450]
gi|419878481|ref|ZP_14399948.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9534]
gi|419880948|ref|ZP_14402308.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9545]
gi|419887812|ref|ZP_14408365.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9570]
gi|419897690|ref|ZP_14417271.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9574]
gi|419904021|ref|ZP_14423031.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9942]
gi|419906107|ref|ZP_14425039.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
gi|419921252|ref|ZP_14439309.1| protein disaggregation chaperone [Escherichia coli 541-15]
gi|419934375|ref|ZP_14451489.1| protein disaggregation chaperone [Escherichia coli 576-1]
gi|419939900|ref|ZP_14456683.1| protein disaggregation chaperone [Escherichia coli 75]
gi|419948570|ref|ZP_14464864.1| protein disaggregation chaperone [Escherichia coli CUMT8]
gi|420091280|ref|ZP_14603031.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9602]
gi|420093021|ref|ZP_14604709.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9634]
gi|420103377|ref|ZP_14614257.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9455]
gi|420110872|ref|ZP_14620772.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9553]
gi|420116853|ref|ZP_14626228.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10021]
gi|420124515|ref|ZP_14633366.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10030]
gi|420128968|ref|ZP_14637514.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10224]
gi|420135381|ref|ZP_14643468.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9952]
gi|420270857|ref|ZP_14773214.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
gi|420276604|ref|ZP_14778887.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
gi|420281787|ref|ZP_14784022.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
gi|420289382|ref|ZP_14791562.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
gi|420290345|ref|ZP_14792512.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
gi|420299471|ref|ZP_14801520.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
gi|420305417|ref|ZP_14807410.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
gi|420312633|ref|ZP_14814551.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
gi|420316427|ref|ZP_14818301.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
gi|420386648|ref|ZP_14885996.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
gi|421778297|ref|ZP_16214875.1| protein disaggregation chaperone [Escherichia coli AD30]
gi|421813585|ref|ZP_16249302.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
gi|421819401|ref|ZP_16254896.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
gi|421825399|ref|ZP_16260756.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
gi|421831559|ref|ZP_16266849.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
gi|422760079|ref|ZP_16813839.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
gi|422767878|ref|ZP_16821604.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
gi|422771505|ref|ZP_16825195.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
gi|422776207|ref|ZP_16829862.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
gi|422787849|ref|ZP_16840587.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
gi|422803517|ref|ZP_16852003.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
gi|422819253|ref|ZP_16867464.1| chaperone ClpB [Escherichia coli M919]
gi|422832204|ref|ZP_16880320.1| chaperone ClpB [Escherichia coli B093]
gi|422836955|ref|ZP_16884987.1| chaperone ClpB [Escherichia coli E101]
gi|422962607|ref|ZP_16972880.1| chaperone ClpB [Escherichia coli H494]
gi|422988714|ref|ZP_16979487.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
gi|422995606|ref|ZP_16986370.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
gi|423000751|ref|ZP_16991505.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
gi|423004423|ref|ZP_16995169.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
gi|423010923|ref|ZP_17001657.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
gi|423020151|ref|ZP_17010860.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
gi|423025317|ref|ZP_17016014.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
gi|423031138|ref|ZP_17021825.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
gi|423038963|ref|ZP_17029637.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044083|ref|ZP_17034750.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045811|ref|ZP_17036471.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054350|ref|ZP_17043157.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061325|ref|ZP_17050121.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423704031|ref|ZP_17678456.1| chaperone ClpB [Escherichia coli H730]
gi|423706710|ref|ZP_17681093.1| chaperone ClpB [Escherichia coli B799]
gi|423726319|ref|ZP_17700374.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
gi|424078689|ref|ZP_17815677.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
gi|424085155|ref|ZP_17821656.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
gi|424091567|ref|ZP_17827508.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
gi|424098188|ref|ZP_17833506.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
gi|424104420|ref|ZP_17839198.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
gi|424111092|ref|ZP_17845334.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
gi|424117029|ref|ZP_17850875.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
gi|424123211|ref|ZP_17856539.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
gi|424129376|ref|ZP_17862289.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
gi|424135648|ref|ZP_17868118.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
gi|424142216|ref|ZP_17874109.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
gi|424148643|ref|ZP_17880025.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
gi|424154459|ref|ZP_17885421.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
gi|424251186|ref|ZP_17890985.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
gi|424329347|ref|ZP_17896896.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
gi|424450894|ref|ZP_17902607.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
gi|424457097|ref|ZP_17908240.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
gi|424463535|ref|ZP_17913979.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
gi|424469873|ref|ZP_17919703.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
gi|424476396|ref|ZP_17925719.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
gi|424482151|ref|ZP_17931138.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
gi|424488309|ref|ZP_17936884.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
gi|424494886|ref|ZP_17942609.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
gi|424501680|ref|ZP_17948582.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
gi|424507926|ref|ZP_17954329.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
gi|424515247|ref|ZP_17959938.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
gi|424521466|ref|ZP_17965601.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
gi|424527359|ref|ZP_17971082.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
gi|424545659|ref|ZP_17988072.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
gi|424551901|ref|ZP_17993766.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
gi|424558086|ref|ZP_17999509.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
gi|424564431|ref|ZP_18005439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
gi|424570565|ref|ZP_18011125.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
gi|424576712|ref|ZP_18016793.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
gi|424582550|ref|ZP_18022202.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
gi|424751118|ref|ZP_18179160.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424761399|ref|ZP_18188980.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424773376|ref|ZP_18200438.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424815314|ref|ZP_18240465.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
gi|425100569|ref|ZP_18503290.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
gi|425105317|ref|ZP_18507640.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
gi|425116070|ref|ZP_18517867.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
gi|425120835|ref|ZP_18522528.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
gi|425127258|ref|ZP_18528433.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
gi|425132990|ref|ZP_18533845.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
gi|425139496|ref|ZP_18539883.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
gi|425145289|ref|ZP_18545289.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
gi|425151401|ref|ZP_18551020.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
gi|425163622|ref|ZP_18562514.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
gi|425169365|ref|ZP_18567845.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
gi|425181458|ref|ZP_18579160.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
gi|425187724|ref|ZP_18585004.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
gi|425194498|ref|ZP_18591273.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
gi|425207358|ref|ZP_18603162.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
gi|425213113|ref|ZP_18608520.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
gi|425219234|ref|ZP_18614207.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
gi|425225784|ref|ZP_18620257.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
gi|425232047|ref|ZP_18626093.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
gi|425237966|ref|ZP_18631691.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
gi|425244183|ref|ZP_18637497.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
gi|425250353|ref|ZP_18643295.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
gi|425256175|ref|ZP_18648701.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
gi|425262430|ref|ZP_18654445.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
gi|425268429|ref|ZP_18660064.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
gi|425273745|ref|ZP_18665153.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
gi|425284289|ref|ZP_18675324.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
gi|425295864|ref|ZP_18686073.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
gi|425306330|ref|ZP_18696028.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
gi|425312568|ref|ZP_18701759.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
gi|425324632|ref|ZP_18713008.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
gi|425330997|ref|ZP_18718860.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
gi|425337173|ref|ZP_18724553.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
gi|425343514|ref|ZP_18730411.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
gi|425349324|ref|ZP_18735799.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
gi|425355619|ref|ZP_18741692.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
gi|425361583|ref|ZP_18747236.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
gi|425367763|ref|ZP_18752931.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
gi|425374112|ref|ZP_18758760.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
gi|425380770|ref|ZP_18764785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
gi|425387002|ref|ZP_18770565.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
gi|425395081|ref|ZP_18778175.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
gi|425399791|ref|ZP_18782502.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
gi|425405876|ref|ZP_18788105.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
gi|425412267|ref|ZP_18794036.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
gi|425418589|ref|ZP_18799865.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
gi|425423439|ref|ZP_18804603.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
gi|425429849|ref|ZP_18810467.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
gi|427805771|ref|ZP_18972838.1| heat shock protein [Escherichia coli chi7122]
gi|427810267|ref|ZP_18977332.1| heat shock protein [Escherichia coli]
gi|428948274|ref|ZP_19020564.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
gi|428954364|ref|ZP_19026171.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
gi|428960336|ref|ZP_19031650.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
gi|428966954|ref|ZP_19037681.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
gi|428972670|ref|ZP_19043017.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
gi|428979173|ref|ZP_19049007.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
gi|428984924|ref|ZP_19054328.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
gi|428991079|ref|ZP_19060077.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
gi|428996949|ref|ZP_19065554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
gi|429003194|ref|ZP_19071327.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
gi|429009275|ref|ZP_19076800.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
gi|429021689|ref|ZP_19088221.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
gi|429033930|ref|ZP_19099462.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
gi|429039986|ref|ZP_19105104.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
gi|429045892|ref|ZP_19110615.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
gi|429051310|ref|ZP_19115880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
gi|429056686|ref|ZP_19121010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
gi|429062187|ref|ZP_19126210.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
gi|429068460|ref|ZP_19131935.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
gi|429074406|ref|ZP_19137661.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
gi|429079599|ref|ZP_19142738.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
gi|429720179|ref|ZP_19255107.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772079|ref|ZP_19304100.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
gi|429777024|ref|ZP_19309000.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785751|ref|ZP_19317647.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
gi|429791641|ref|ZP_19323496.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
gi|429792489|ref|ZP_19324339.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
gi|429799065|ref|ZP_19330864.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
gi|429807578|ref|ZP_19339303.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
gi|429812478|ref|ZP_19344162.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
gi|429818000|ref|ZP_19349638.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
gi|429823211|ref|ZP_19354806.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
gi|429827622|ref|ZP_19358673.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
gi|429833979|ref|ZP_19364338.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
gi|429904586|ref|ZP_19370565.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908724|ref|ZP_19374688.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914596|ref|ZP_19380543.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919626|ref|ZP_19385557.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925446|ref|ZP_19391359.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929382|ref|ZP_19395284.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935921|ref|ZP_19401807.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941601|ref|ZP_19407475.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944282|ref|ZP_19410144.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951840|ref|ZP_19417686.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955189|ref|ZP_19421021.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
gi|432354507|ref|ZP_19597777.1| chaperone ClpB [Escherichia coli KTE2]
gi|432370814|ref|ZP_19613897.1| chaperone ClpB [Escherichia coli KTE10]
gi|432377798|ref|ZP_19620787.1| chaperone ClpB [Escherichia coli KTE12]
gi|432382286|ref|ZP_19625228.1| chaperone ClpB [Escherichia coli KTE15]
gi|432388263|ref|ZP_19631146.1| chaperone ClpB [Escherichia coli KTE16]
gi|432389693|ref|ZP_19632563.1| chaperone ClpB [Escherichia coli KTE21]
gi|432398538|ref|ZP_19641317.1| chaperone ClpB [Escherichia coli KTE25]
gi|432402856|ref|ZP_19645607.1| chaperone ClpB [Escherichia coli KTE26]
gi|432407665|ref|ZP_19650372.1| chaperone ClpB [Escherichia coli KTE28]
gi|432412756|ref|ZP_19655417.1| chaperone ClpB [Escherichia coli KTE39]
gi|432418069|ref|ZP_19660667.1| chaperone ClpB [Escherichia coli KTE44]
gi|432422935|ref|ZP_19665478.1| chaperone ClpB [Escherichia coli KTE178]
gi|432427129|ref|ZP_19669624.1| chaperone ClpB [Escherichia coli KTE181]
gi|432437314|ref|ZP_19679702.1| chaperone ClpB [Escherichia coli KTE188]
gi|432442055|ref|ZP_19684394.1| chaperone ClpB [Escherichia coli KTE189]
gi|432447160|ref|ZP_19689459.1| chaperone ClpB [Escherichia coli KTE191]
gi|432450725|ref|ZP_19692987.1| chaperone ClpB [Escherichia coli KTE193]
gi|432457655|ref|ZP_19699836.1| chaperone ClpB [Escherichia coli KTE201]
gi|432461588|ref|ZP_19703734.1| chaperone ClpB [Escherichia coli KTE204]
gi|432471922|ref|ZP_19713964.1| chaperone ClpB [Escherichia coli KTE206]
gi|432476816|ref|ZP_19718811.1| chaperone ClpB [Escherichia coli KTE208]
gi|432486371|ref|ZP_19728285.1| chaperone ClpB [Escherichia coli KTE212]
gi|432490359|ref|ZP_19732227.1| chaperone ClpB [Escherichia coli KTE213]
gi|432496650|ref|ZP_19738446.1| chaperone ClpB [Escherichia coli KTE214]
gi|432501075|ref|ZP_19742831.1| chaperone ClpB [Escherichia coli KTE216]
gi|432505394|ref|ZP_19747116.1| chaperone ClpB [Escherichia coli KTE220]
gi|432514894|ref|ZP_19752116.1| chaperone ClpB [Escherichia coli KTE224]
gi|432518691|ref|ZP_19755876.1| chaperone ClpB [Escherichia coli KTE228]
gi|432524788|ref|ZP_19761914.1| chaperone ClpB [Escherichia coli KTE230]
gi|432527353|ref|ZP_19764443.1| chaperone ClpB [Escherichia coli KTE233]
gi|432534909|ref|ZP_19771880.1| chaperone ClpB [Escherichia coli KTE234]
gi|432538812|ref|ZP_19775712.1| chaperone ClpB [Escherichia coli KTE235]
gi|432544230|ref|ZP_19781071.1| chaperone ClpB [Escherichia coli KTE236]
gi|432549721|ref|ZP_19786486.1| chaperone ClpB [Escherichia coli KTE237]
gi|432554637|ref|ZP_19791357.1| chaperone ClpB [Escherichia coli KTE47]
gi|432559798|ref|ZP_19796466.1| chaperone ClpB [Escherichia coli KTE49]
gi|432564879|ref|ZP_19801458.1| chaperone ClpB [Escherichia coli KTE51]
gi|432569677|ref|ZP_19806186.1| chaperone ClpB [Escherichia coli KTE53]
gi|432576854|ref|ZP_19813309.1| chaperone ClpB [Escherichia coli KTE56]
gi|432593809|ref|ZP_19830123.1| chaperone ClpB [Escherichia coli KTE60]
gi|432603220|ref|ZP_19839463.1| chaperone ClpB [Escherichia coli KTE66]
gi|432608476|ref|ZP_19844660.1| chaperone ClpB [Escherichia coli KTE67]
gi|432612566|ref|ZP_19848726.1| chaperone ClpB [Escherichia coli KTE72]
gi|432617786|ref|ZP_19853897.1| chaperone ClpB [Escherichia coli KTE75]
gi|432622822|ref|ZP_19858849.1| chaperone ClpB [Escherichia coli KTE76]
gi|432628214|ref|ZP_19864189.1| chaperone ClpB [Escherichia coli KTE77]
gi|432632352|ref|ZP_19868276.1| chaperone ClpB [Escherichia coli KTE80]
gi|432637831|ref|ZP_19873699.1| chaperone ClpB [Escherichia coli KTE81]
gi|432642068|ref|ZP_19877899.1| chaperone ClpB [Escherichia coli KTE83]
gi|432647119|ref|ZP_19882907.1| chaperone ClpB [Escherichia coli KTE86]
gi|432652117|ref|ZP_19887869.1| chaperone ClpB [Escherichia coli KTE87]
gi|432656755|ref|ZP_19892457.1| chaperone ClpB [Escherichia coli KTE93]
gi|432661801|ref|ZP_19897441.1| chaperone ClpB [Escherichia coli KTE111]
gi|432667016|ref|ZP_19902595.1| chaperone ClpB [Escherichia coli KTE116]
gi|432671693|ref|ZP_19907221.1| chaperone ClpB [Escherichia coli KTE119]
gi|432675714|ref|ZP_19911170.1| chaperone ClpB [Escherichia coli KTE142]
gi|432681202|ref|ZP_19916574.1| chaperone ClpB [Escherichia coli KTE143]
gi|432686415|ref|ZP_19921709.1| chaperone ClpB [Escherichia coli KTE156]
gi|432687799|ref|ZP_19923081.1| chaperone ClpB [Escherichia coli KTE161]
gi|432695402|ref|ZP_19930599.1| chaperone ClpB [Escherichia coli KTE162]
gi|432700023|ref|ZP_19935175.1| chaperone ClpB [Escherichia coli KTE169]
gi|432705369|ref|ZP_19940468.1| chaperone ClpB [Escherichia coli KTE171]
gi|432706863|ref|ZP_19941944.1| chaperone ClpB [Escherichia coli KTE6]
gi|432714328|ref|ZP_19949363.1| chaperone ClpB [Escherichia coli KTE8]
gi|432719738|ref|ZP_19954705.1| chaperone ClpB [Escherichia coli KTE9]
gi|432724058|ref|ZP_19958975.1| chaperone ClpB [Escherichia coli KTE17]
gi|432728640|ref|ZP_19963517.1| chaperone ClpB [Escherichia coli KTE18]
gi|432733331|ref|ZP_19968159.1| chaperone ClpB [Escherichia coli KTE45]
gi|432738082|ref|ZP_19972837.1| chaperone ClpB [Escherichia coli KTE42]
gi|432742324|ref|ZP_19977042.1| chaperone ClpB [Escherichia coli KTE23]
gi|432746588|ref|ZP_19981252.1| chaperone ClpB [Escherichia coli KTE43]
gi|432751038|ref|ZP_19985639.1| chaperone ClpB [Escherichia coli KTE29]
gi|432760418|ref|ZP_19994910.1| chaperone ClpB [Escherichia coli KTE46]
gi|432765952|ref|ZP_20000384.1| chaperone ClpB [Escherichia coli KTE48]
gi|432771542|ref|ZP_20005867.1| chaperone ClpB [Escherichia coli KTE50]
gi|432775671|ref|ZP_20009939.1| chaperone ClpB [Escherichia coli KTE54]
gi|432784507|ref|ZP_20018686.1| chaperone ClpB [Escherichia coli KTE63]
gi|432793784|ref|ZP_20027867.1| chaperone ClpB [Escherichia coli KTE78]
gi|432795283|ref|ZP_20029345.1| chaperone ClpB [Escherichia coli KTE79]
gi|432806777|ref|ZP_20040697.1| chaperone ClpB [Escherichia coli KTE91]
gi|432810271|ref|ZP_20044150.1| chaperone ClpB [Escherichia coli KTE101]
gi|432816317|ref|ZP_20050099.1| chaperone ClpB [Escherichia coli KTE115]
gi|432828237|ref|ZP_20061859.1| chaperone ClpB [Escherichia coli KTE135]
gi|432835543|ref|ZP_20069080.1| chaperone ClpB [Escherichia coli KTE136]
gi|432840383|ref|ZP_20073847.1| chaperone ClpB [Escherichia coli KTE140]
gi|432852575|ref|ZP_20082291.1| chaperone ClpB [Escherichia coli KTE144]
gi|432863617|ref|ZP_20087499.1| chaperone ClpB [Escherichia coli KTE146]
gi|432869988|ref|ZP_20090520.1| chaperone ClpB [Escherichia coli KTE147]
gi|432876455|ref|ZP_20094373.1| chaperone ClpB [Escherichia coli KTE154]
gi|432887649|ref|ZP_20101620.1| chaperone ClpB [Escherichia coli KTE158]
gi|432905953|ref|ZP_20114717.1| chaperone ClpB [Escherichia coli KTE194]
gi|432913821|ref|ZP_20119441.1| chaperone ClpB [Escherichia coli KTE190]
gi|432920561|ref|ZP_20124196.1| chaperone ClpB [Escherichia coli KTE173]
gi|432928158|ref|ZP_20129411.1| chaperone ClpB [Escherichia coli KTE175]
gi|432935499|ref|ZP_20134840.1| chaperone ClpB [Escherichia coli KTE184]
gi|432938973|ref|ZP_20137175.1| chaperone ClpB [Escherichia coli KTE183]
gi|432948540|ref|ZP_20143591.1| chaperone ClpB [Escherichia coli KTE196]
gi|432956173|ref|ZP_20147961.1| chaperone ClpB [Escherichia coli KTE197]
gi|432962917|ref|ZP_20152387.1| chaperone ClpB [Escherichia coli KTE202]
gi|432968667|ref|ZP_20157581.1| chaperone ClpB [Escherichia coli KTE203]
gi|432972748|ref|ZP_20161613.1| chaperone ClpB [Escherichia coli KTE207]
gi|432974744|ref|ZP_20163580.1| chaperone ClpB [Escherichia coli KTE209]
gi|432981962|ref|ZP_20170736.1| chaperone ClpB [Escherichia coli KTE211]
gi|432986307|ref|ZP_20175027.1| chaperone ClpB [Escherichia coli KTE215]
gi|432991689|ref|ZP_20180353.1| chaperone ClpB [Escherichia coli KTE217]
gi|432996299|ref|ZP_20184884.1| chaperone ClpB [Escherichia coli KTE218]
gi|433000870|ref|ZP_20189393.1| chaperone ClpB [Escherichia coli KTE223]
gi|433014869|ref|ZP_20203210.1| chaperone ClpB [Escherichia coli KTE104]
gi|433019661|ref|ZP_20207852.1| chaperone ClpB [Escherichia coli KTE105]
gi|433024443|ref|ZP_20212423.1| chaperone ClpB [Escherichia coli KTE106]
gi|433034423|ref|ZP_20222130.1| chaperone ClpB [Escherichia coli KTE112]
gi|433039594|ref|ZP_20227191.1| chaperone ClpB [Escherichia coli KTE113]
gi|433044141|ref|ZP_20231634.1| chaperone ClpB [Escherichia coli KTE117]
gi|433049008|ref|ZP_20236353.1| chaperone ClpB [Escherichia coli KTE120]
gi|433054235|ref|ZP_20241407.1| chaperone ClpB [Escherichia coli KTE122]
gi|433059078|ref|ZP_20246119.1| chaperone ClpB [Escherichia coli KTE124]
gi|433064032|ref|ZP_20250948.1| chaperone ClpB [Escherichia coli KTE125]
gi|433068881|ref|ZP_20255665.1| chaperone ClpB [Escherichia coli KTE128]
gi|433078767|ref|ZP_20265293.1| chaperone ClpB [Escherichia coli KTE131]
gi|433083503|ref|ZP_20269958.1| chaperone ClpB [Escherichia coli KTE133]
gi|433088277|ref|ZP_20274645.1| chaperone ClpB [Escherichia coli KTE137]
gi|433092963|ref|ZP_20279226.1| chaperone ClpB [Escherichia coli KTE138]
gi|433097404|ref|ZP_20283586.1| chaperone ClpB [Escherichia coli KTE139]
gi|433102131|ref|ZP_20288209.1| chaperone ClpB [Escherichia coli KTE145]
gi|433106848|ref|ZP_20292819.1| chaperone ClpB [Escherichia coli KTE148]
gi|433111824|ref|ZP_20297684.1| chaperone ClpB [Escherichia coli KTE150]
gi|433116482|ref|ZP_20302270.1| chaperone ClpB [Escherichia coli KTE153]
gi|433126152|ref|ZP_20311706.1| chaperone ClpB [Escherichia coli KTE160]
gi|433131132|ref|ZP_20316565.1| chaperone ClpB [Escherichia coli KTE163]
gi|433135799|ref|ZP_20321139.1| chaperone ClpB [Escherichia coli KTE166]
gi|433140220|ref|ZP_20325472.1| chaperone ClpB [Escherichia coli KTE167]
gi|433145192|ref|ZP_20330332.1| chaperone ClpB [Escherichia coli KTE168]
gi|433150138|ref|ZP_20335154.1| chaperone ClpB [Escherichia coli KTE174]
gi|433159637|ref|ZP_20344470.1| chaperone ClpB [Escherichia coli KTE177]
gi|433174494|ref|ZP_20359012.1| chaperone ClpB [Escherichia coli KTE232]
gi|433179426|ref|ZP_20363819.1| chaperone ClpB [Escherichia coli KTE82]
gi|433189331|ref|ZP_20373426.1| chaperone ClpB [Escherichia coli KTE88]
gi|433194648|ref|ZP_20378632.1| chaperone ClpB [Escherichia coli KTE90]
gi|433199300|ref|ZP_20383194.1| chaperone ClpB [Escherichia coli KTE94]
gi|433204261|ref|ZP_20388026.1| chaperone ClpB [Escherichia coli KTE95]
gi|433213500|ref|ZP_20397089.1| chaperone ClpB [Escherichia coli KTE99]
gi|433323021|ref|ZP_20400391.1| protein disaggregation chaperone [Escherichia coli J96]
gi|433327005|ref|ZP_20403638.1| protein disaggregation chaperone [Escherichia coli J96]
gi|442590621|ref|ZP_21009382.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442599575|ref|ZP_21017288.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442604746|ref|ZP_21019590.1| ClpB protein [Escherichia coli Nissle 1917]
gi|443618647|ref|YP_007382503.1| protein disaggregation chaperone [Escherichia coli APEC O78]
gi|444926153|ref|ZP_21245453.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
gi|444931860|ref|ZP_21250904.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
gi|444937311|ref|ZP_21256091.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
gi|444942940|ref|ZP_21261461.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
gi|444948426|ref|ZP_21266740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
gi|444953971|ref|ZP_21272070.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
gi|444959494|ref|ZP_21277350.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
gi|444964602|ref|ZP_21282213.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
gi|444970627|ref|ZP_21287993.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
gi|444975912|ref|ZP_21293039.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
gi|444981297|ref|ZP_21298211.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
gi|444986692|ref|ZP_21303476.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
gi|444992006|ref|ZP_21308652.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
gi|444997317|ref|ZP_21313817.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
gi|445002889|ref|ZP_21319281.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
gi|445008328|ref|ZP_21324570.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
gi|445013419|ref|ZP_21329529.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
gi|445019288|ref|ZP_21335256.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
gi|445024702|ref|ZP_21340529.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
gi|445030078|ref|ZP_21345756.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
gi|445035545|ref|ZP_21351080.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
gi|445041170|ref|ZP_21356546.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
gi|445046399|ref|ZP_21361652.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
gi|445051913|ref|ZP_21366962.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
gi|445057684|ref|ZP_21372545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
gi|450220041|ref|ZP_21896286.1| protein disaggregation chaperone [Escherichia coli O08]
gi|450247072|ref|ZP_21901086.1| protein disaggregation chaperone [Escherichia coli S17]
gi|452967749|ref|ZP_21965976.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EC4009]
gi|54036848|sp|P63284.1|CLPB_ECOLI RecName: Full=Chaperone protein ClpB; AltName: Full=Heat shock
protein F84.1
gi|54036849|sp|P63285.1|CLPB_ECO57 RecName: Full=Chaperone protein ClpB
gi|54036850|sp|P63286.1|CLPB_ECOL6 RecName: Full=Chaperone protein ClpB
gi|1788943|gb|AAC75641.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MG1655]
gi|1799995|dbj|BAA16476.1| protein disaggregation chaperone [Escherichia coli str. K12 substr.
W3110]
gi|13362926|dbj|BAB36878.1| heat shock protein [Escherichia coli O157:H7 str. Sakai]
gi|73856628|gb|AAZ89335.1| heat shock protein [Shigella sonnei Ss046]
gi|81246456|gb|ABB67164.1| heat shock protein [Shigella boydii Sb227]
gi|110344347|gb|ABG70584.1| ClpB protein [Escherichia coli 536]
gi|157067748|gb|ABV07003.1| ATP-dependent chaperone protein ClpB [Escherichia coli HS]
gi|157080262|gb|ABV19970.1| ATP-dependent chaperone protein ClpB [Escherichia coli E24377A]
gi|169754057|gb|ACA76756.1| ATP-dependent chaperone ClpB [Escherichia coli ATCC 8739]
gi|169890032|gb|ACB03739.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. DH10B]
gi|170521698|gb|ACB19876.1| ATP-dependent chaperone protein ClpB [Escherichia coli SMS-3-5]
gi|187770676|gb|EDU34520.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
gi|188014008|gb|EDU52130.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
gi|188487823|gb|EDU62926.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
gi|189003333|gb|EDU72319.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
gi|189354548|gb|EDU72967.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
gi|189359601|gb|EDU78020.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
gi|189367288|gb|EDU85704.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
gi|189370894|gb|EDU89310.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
gi|189376181|gb|EDU94597.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
gi|190900892|gb|EDV60678.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
gi|190905142|gb|EDV64786.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
gi|192929286|gb|EDV82895.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
gi|194411789|gb|EDX28110.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
gi|194421696|gb|EDX37705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
gi|208725798|gb|EDZ75399.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
gi|208734329|gb|EDZ83016.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
gi|208739428|gb|EDZ87110.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
gi|209159195|gb|ACI36628.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4115]
gi|209913328|dbj|BAG78402.1| ATP-dependent protease [Escherichia coli SE11]
gi|215266003|emb|CAS10414.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
E2348/69]
gi|217319111|gb|EEC27536.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
TW14588]
gi|218352949|emb|CAU98748.1| protein disaggregation chaperone [Escherichia coli 55989]
gi|218361940|emb|CAQ99542.1| protein disaggregation chaperone [Escherichia coli IAI1]
gi|218371090|emb|CAR18919.1| protein disaggregation chaperone [Escherichia coli IAI39]
gi|218428275|emb|CAR09200.2| protein disaggregation chaperone [Escherichia coli ED1a]
gi|218433191|emb|CAR14090.1| protein disaggregation chaperone [Escherichia coli UMN026]
gi|238863301|gb|ACR65299.1| protein disaggregation chaperone [Escherichia coli BW2952]
gi|242378188|emb|CAQ32963.1| ClpB chaperone [Escherichia coli BL21(DE3)]
gi|253323556|gb|ACT28158.1| ATP-dependent chaperone ClpB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974464|gb|ACT40135.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
gi|253978631|gb|ACT44301.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
gi|254593940|gb|ACT73301.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
TW14359]
gi|257755331|dbj|BAI26833.1| protein disaggregation chaperone ClpB [Escherichia coli O26:H11
str. 11368]
gi|257760421|dbj|BAI31918.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
str. 12009]
gi|257765630|dbj|BAI37125.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
str. 11128]
gi|260448332|gb|ACX38754.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
gi|281179640|dbj|BAI55970.1| ATP-dependent protease [Escherichia coli SE15]
gi|284922540|emb|CBG35627.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
gi|299880532|gb|EFI88743.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
gi|305854526|gb|EFM54964.1| protein disaggregation chaperone [Escherichia coli NC101]
gi|306905523|gb|EFN36057.1| ATP-dependent chaperone ClpB [Escherichia coli W]
gi|307554607|gb|ADN47382.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
gi|309702974|emb|CBJ02305.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
gi|312289927|gb|EFR17815.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
gi|315061907|gb|ADT76234.1| protein disaggregation chaperone [Escherichia coli W]
gi|315137212|dbj|BAJ44371.1| heat shock protein [Escherichia coli DH1]
gi|315615333|gb|EFU95967.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
gi|320177085|gb|EFW52102.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
gi|320182491|gb|EFW57385.1| ClpB protein [Shigella boydii ATCC 9905]
gi|320185012|gb|EFW59794.1| ClpB protein [Shigella flexneri CDC 796-83]
gi|320188931|gb|EFW63590.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
gi|320194759|gb|EFW69388.1| ClpB protein [Escherichia coli WV_060327]
gi|320198369|gb|EFW72971.1| ClpB protein [Escherichia coli EC4100B]
gi|320640776|gb|EFX10274.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
G5101]
gi|320646121|gb|EFX15066.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
493-89]
gi|320651418|gb|EFX19819.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
2687]
gi|320657023|gb|EFX24846.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662687|gb|EFX30031.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
5905]
gi|320667504|gb|EFX34428.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|323156248|gb|EFZ42407.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
gi|323177280|gb|EFZ62868.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
gi|323184531|gb|EFZ69905.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
gi|323377512|gb|ADX49780.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
gi|323935612|gb|EGB31932.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
gi|323941388|gb|EGB37572.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
gi|323946279|gb|EGB42312.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
gi|323960548|gb|EGB56177.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
gi|323963902|gb|EGB59395.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
gi|324120051|gb|EGC13927.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
gi|325496334|gb|EGC94193.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
gi|326344348|gb|EGD68106.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
gi|326347717|gb|EGD71434.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
gi|327252298|gb|EGE63970.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
gi|330912357|gb|EGH40867.1| ClpB protein [Escherichia coli AA86]
gi|331058616|gb|EGI30594.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
gi|331063012|gb|EGI34925.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
gi|331068775|gb|EGI40168.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
gi|332344463|gb|AEE57797.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
gi|333001158|gb|EGK20728.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
gi|333015796|gb|EGK35133.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
gi|333970692|gb|AEG37497.1| ClpB protein [Escherichia coli NA114]
gi|339416185|gb|AEJ57857.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
gi|340733532|gb|EGR62663.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
01-09591]
gi|340739435|gb|EGR73670.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
LB226692]
gi|342364116|gb|EGU28218.1| protein disaggregation chaperone [Escherichia coli XH140A]
gi|344192237|gb|EGV46333.1| protein disaggregation chaperone [Escherichia coli XH001]
gi|345334599|gb|EGW67041.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
gi|345337104|gb|EGW69537.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
gi|345349284|gb|EGW81571.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
gi|345352423|gb|EGW84672.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
gi|345357537|gb|EGW89731.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
gi|345361095|gb|EGW93256.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
gi|345369763|gb|EGX01744.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
gi|345374492|gb|EGX06443.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
gi|345386438|gb|EGX16271.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
gi|345392748|gb|EGX22527.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
gi|349739066|gb|AEQ13772.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
gi|354862441|gb|EHF22879.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
gi|354867725|gb|EHF28147.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
gi|354868123|gb|EHF28541.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
gi|354873722|gb|EHF34099.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
gi|354880406|gb|EHF40742.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
gi|354888530|gb|EHF48786.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
gi|354892691|gb|EHF52897.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
gi|354893758|gb|EHF53957.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896838|gb|EHF57005.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
gi|354898532|gb|EHF58686.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912300|gb|EHF72301.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915256|gb|EHF75236.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917144|gb|EHF77113.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|359332897|dbj|BAL39344.1| protein disaggregation chaperone [Escherichia coli str. K-12
substr. MDS42]
gi|371592087|gb|EHN81009.1| chaperone ClpB [Escherichia coli H494]
gi|371606808|gb|EHN95399.1| chaperone ClpB [Escherichia coli E101]
gi|371615394|gb|EHO03800.1| chaperone ClpB [Escherichia coli B093]
gi|374359951|gb|AEZ41658.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
RM12579]
gi|375320531|gb|EHS66474.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
T22]
gi|377842710|gb|EHU07760.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
gi|377842992|gb|EHU08035.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
gi|377846545|gb|EHU11556.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
gi|377855963|gb|EHU20825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
gi|377862695|gb|EHU27503.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
gi|377876581|gb|EHU41181.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
gi|377889074|gb|EHU53541.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
gi|377894379|gb|EHU58801.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
gi|377903360|gb|EHU67656.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
gi|377903368|gb|EHU67661.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
gi|377910932|gb|EHU75115.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
gi|377911230|gb|EHU75404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
gi|377924761|gb|EHU88702.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
gi|377926892|gb|EHU90819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
gi|377935034|gb|EHU98857.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
gi|377938729|gb|EHV02494.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
gi|377941241|gb|EHV04985.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
gi|377946132|gb|EHV09819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
gi|377952146|gb|EHV15747.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
gi|377965090|gb|EHV28518.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
gi|377973637|gb|EHV36974.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
gi|377974765|gb|EHV38091.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
gi|377982172|gb|EHV45424.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
gi|377991404|gb|EHV54555.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
gi|377993350|gb|EHV56487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
gi|377995518|gb|EHV58634.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
gi|378006522|gb|EHV69500.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
gi|378015305|gb|EHV78202.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
gi|378022804|gb|EHV85487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
gi|378027627|gb|EHV90253.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
gi|378031946|gb|EHV94528.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
gi|378039355|gb|EHW01848.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
gi|378052270|gb|EHW14579.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
gi|378052552|gb|EHW14856.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
gi|378074646|gb|EHW36679.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
gi|378076171|gb|EHW38183.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
gi|378083065|gb|EHW45001.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
gi|378093516|gb|EHW55322.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
gi|378099275|gb|EHW60983.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
gi|378104890|gb|EHW66542.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
gi|378115525|gb|EHW77064.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
gi|378128356|gb|EHW89738.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
gi|378129125|gb|EHW90501.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
gi|378130260|gb|EHW91628.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
gi|378140640|gb|EHX01863.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
gi|378147456|gb|EHX08603.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
gi|378157016|gb|EHX18060.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
gi|378164351|gb|EHX25297.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
gi|378168579|gb|EHX29483.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
gi|378168939|gb|EHX29840.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
gi|378180553|gb|EHX41234.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
gi|378185028|gb|EHX45660.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
gi|378187001|gb|EHX47621.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
gi|378215991|gb|EHX76281.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
gi|378218075|gb|EHX78347.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
gi|378227090|gb|EHX87267.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
gi|378230377|gb|EHX90496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
gi|378236556|gb|EHX96601.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
gi|378243815|gb|EHY03761.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
gi|378252827|gb|EHY12705.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
gi|378258568|gb|EHY18385.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
gi|380347350|gb|EIA35638.1| protein disaggregation chaperone [Escherichia coli SCI-07]
gi|383104021|gb|AFG41530.1| Chaperone protein clpB [Escherichia coli P12b]
gi|383391992|gb|AFH16950.1| protein disaggregation chaperone [Escherichia coli KO11FL]
gi|383406171|gb|AFH12414.1| protein disaggregation chaperone [Escherichia coli W]
gi|384380825|gb|EIE38691.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
gi|384470764|gb|EIE54862.1| protein disaggregation chaperone [Escherichia coli AI27]
gi|385537254|gb|EIF84136.1| chaperone ClpB [Escherichia coli M919]
gi|385707147|gb|EIG44179.1| chaperone ClpB [Escherichia coli H730]
gi|385711187|gb|EIG48147.1| chaperone ClpB [Escherichia coli B799]
gi|386121213|gb|EIG69830.1| chaperone ClpB [Escherichia sp. 4_1_40B]
gi|386140943|gb|EIG82095.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
gi|386147873|gb|EIG94313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
gi|386153382|gb|EIH04671.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
gi|386160309|gb|EIH22120.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
gi|386167684|gb|EIH34200.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
gi|386171607|gb|EIH43646.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
gi|386177531|gb|EIH55010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
gi|386183017|gb|EIH65768.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
gi|386192481|gb|EIH81205.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
gi|386194077|gb|EIH88338.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
gi|386201951|gb|EII00942.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
gi|386204519|gb|EII09030.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
gi|386218201|gb|EII34684.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
gi|386224215|gb|EII46558.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
gi|386227619|gb|EII54975.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
gi|386236503|gb|EII68479.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
gi|386254601|gb|EIJ04291.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
gi|386256623|gb|EIJ12117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
(10e)]
gi|388334874|gb|EIL01454.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9534]
gi|388335556|gb|EIL02116.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
CVM9450]
gi|388336442|gb|EIL02985.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
CVM9340]
gi|388354959|gb|EIL19831.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9574]
gi|388361811|gb|EIL25885.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9570]
gi|388366891|gb|EIL30600.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9545]
gi|388368482|gb|EIL32113.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9942]
gi|388379915|gb|EIL42545.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
gi|388397947|gb|EIL58901.1| protein disaggregation chaperone [Escherichia coli 541-15]
gi|388406100|gb|EIL66511.1| protein disaggregation chaperone [Escherichia coli 75]
gi|388408493|gb|EIL68837.1| protein disaggregation chaperone [Escherichia coli 576-1]
gi|388421160|gb|EIL80781.1| protein disaggregation chaperone [Escherichia coli CUMT8]
gi|390640873|gb|EIN20317.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
gi|390642395|gb|EIN21793.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
gi|390643356|gb|EIN22710.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
gi|390659773|gb|EIN37521.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
gi|390661066|gb|EIN38738.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
gi|390662860|gb|EIN40396.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
gi|390676582|gb|EIN52672.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
gi|390679827|gb|EIN55693.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
gi|390683118|gb|EIN58832.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
gi|390695597|gb|EIN70116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
gi|390700139|gb|EIN74460.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
gi|390700597|gb|EIN74890.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
gi|390713745|gb|EIN86673.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
gi|390721880|gb|EIN94573.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
gi|390723387|gb|EIN95983.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
gi|390726355|gb|EIN98805.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
gi|390741481|gb|EIO12548.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
gi|390741941|gb|EIO12968.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
gi|390744542|gb|EIO15398.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
gi|390757407|gb|EIO26891.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
gi|390766404|gb|EIO35526.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
gi|390767719|gb|EIO36786.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
gi|390768138|gb|EIO37181.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
gi|390780798|gb|EIO48492.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
gi|390786853|gb|EIO54355.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
gi|390789740|gb|EIO57184.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
gi|390802310|gb|EIO69351.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
gi|390804600|gb|EIO71558.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
gi|390807166|gb|EIO74068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
gi|390815319|gb|EIO81854.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
gi|390825299|gb|EIO91234.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
gi|390829325|gb|EIO94927.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
gi|390830191|gb|EIO95751.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
gi|390845553|gb|EIP09187.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
gi|390845736|gb|EIP09363.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
gi|390850018|gb|EIP13414.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
gi|390870013|gb|EIP31586.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
gi|390877881|gb|EIP38772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
gi|390883127|gb|EIP43584.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
gi|390892599|gb|EIP52174.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
gi|390895117|gb|EIP54598.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
gi|390897356|gb|EIP56691.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
gi|390907430|gb|EIP66293.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
gi|390918506|gb|EIP76903.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
gi|390919698|gb|EIP78023.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
gi|391283665|gb|EIQ42280.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
gi|391304571|gb|EIQ62380.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
gi|394383682|gb|EJE61272.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9602]
gi|394384190|gb|EJE61757.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10224]
gi|394399883|gb|EJE75853.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CVM9634]
gi|394400710|gb|EJE76622.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9553]
gi|394402890|gb|EJE78574.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10021]
gi|394408132|gb|EJE82854.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CVM9455]
gi|394414750|gb|EJE88672.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM10030]
gi|394420119|gb|EJE93671.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CVM9952]
gi|397784398|gb|EJK95252.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
gi|397898400|gb|EJL14784.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
gi|404290464|gb|EEH71314.2| chaperone ClpB [Escherichia sp. 1_1_43]
gi|406776579|gb|AFS56003.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053148|gb|AFS73199.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066522|gb|AFS87569.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408065418|gb|EKG99892.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
gi|408066055|gb|EKH00519.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
gi|408078498|gb|EKH12650.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
gi|408082392|gb|EKH16375.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
gi|408096980|gb|EKH29894.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
gi|408103486|gb|EKH35832.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
gi|408108044|gb|EKH40082.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
gi|408120379|gb|EKH51376.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
gi|408126922|gb|EKH57449.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
gi|408137165|gb|EKH66879.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
gi|408139500|gb|EKH69110.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
gi|408145583|gb|EKH74742.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
gi|408154477|gb|EKH82818.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
gi|408159346|gb|EKH87418.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
gi|408163120|gb|EKH91000.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
gi|408172759|gb|EKH99813.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
gi|408179519|gb|EKI06179.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
gi|408182301|gb|EKI08817.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
gi|408192674|gb|EKI18244.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
gi|408201192|gb|EKI26354.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
gi|408217080|gb|EKI41366.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
gi|408226599|gb|EKI50233.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
gi|408227563|gb|EKI51146.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
gi|408241828|gb|EKI64439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
gi|408246116|gb|EKI68425.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
gi|408254867|gb|EKI76335.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
gi|408258402|gb|EKI79668.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
gi|408264914|gb|EKI85679.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
gi|408273621|gb|EKI93673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
gi|408276539|gb|EKI96438.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
gi|408285691|gb|EKJ04683.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
gi|408290482|gb|EKJ09195.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
gi|408295458|gb|EKJ13772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
gi|408303668|gb|EKJ21122.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
gi|408307246|gb|EKJ24589.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
gi|408318093|gb|EKJ34309.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
gi|408324292|gb|EKJ40226.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
gi|408325685|gb|EKJ41541.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
gi|408335945|gb|EKJ50755.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
gi|408342856|gb|EKJ57270.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
gi|408345643|gb|EKJ59958.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
gi|408456596|gb|EKJ80409.1| protein disaggregation chaperone [Escherichia coli AD30]
gi|408545467|gb|EKK22897.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
gi|408549014|gb|EKK26382.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
gi|408567358|gb|EKK43417.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
gi|408568063|gb|EKK44102.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
gi|408568197|gb|EKK44234.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
gi|408578176|gb|EKK53705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
gi|408580682|gb|EKK56069.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
gi|408590902|gb|EKK65363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
gi|408595822|gb|EKK70028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
gi|408600548|gb|EKK74389.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
gi|408612015|gb|EKK85363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
gi|412963953|emb|CCK47879.1| heat shock protein [Escherichia coli chi7122]
gi|412970446|emb|CCJ45092.1| heat shock protein [Escherichia coli]
gi|421936383|gb|EKT94047.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421939968|gb|EKT97456.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421944373|gb|EKU01633.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427204151|gb|EKV74434.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
gi|427206034|gb|EKV76261.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
gi|427208023|gb|EKV78176.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
gi|427220326|gb|EKV89252.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
gi|427223700|gb|EKV92431.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
gi|427227468|gb|EKV96019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
gi|427241215|gb|EKW08657.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
gi|427241593|gb|EKW09019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
gi|427245213|gb|EKW12509.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
gi|427260080|gb|EKW26078.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
gi|427264041|gb|EKW29740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
gi|427275876|gb|EKW40469.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
gi|427282427|gb|EKW46677.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
gi|427291326|gb|EKW54740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
gi|427298443|gb|EKW61445.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
gi|427299919|gb|EKW62880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
gi|427311752|gb|EKW73928.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
gi|427314740|gb|EKW76771.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
gi|427319003|gb|EKW80837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
gi|427327344|gb|EKW88737.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
gi|427328670|gb|EKW90028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
gi|429253084|gb|EKY37580.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
gi|429254795|gb|EKY39162.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
gi|429348329|gb|EKY85099.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
gi|429359075|gb|EKY95741.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
gi|429361406|gb|EKY98061.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
gi|429361713|gb|EKY98366.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
gi|429364353|gb|EKZ00973.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
gi|429375202|gb|EKZ11740.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
gi|429376359|gb|EKZ12888.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
gi|429378668|gb|EKZ15176.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
gi|429379532|gb|EKZ16032.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
gi|429390667|gb|EKZ27076.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
gi|429406135|gb|EKZ42396.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
gi|429409054|gb|EKZ45285.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413384|gb|EKZ49571.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
gi|429416528|gb|EKZ52683.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
gi|429420238|gb|EKZ56368.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
gi|429428129|gb|EKZ64208.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
gi|429431551|gb|EKZ67598.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436661|gb|EKZ72677.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437565|gb|EKZ73568.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447235|gb|EKZ83159.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451488|gb|EKZ87379.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456748|gb|EKZ92592.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
gi|430874323|gb|ELB97880.1| chaperone ClpB [Escherichia coli KTE2]
gi|430883700|gb|ELC06674.1| chaperone ClpB [Escherichia coli KTE10]
gi|430897818|gb|ELC20012.1| chaperone ClpB [Escherichia coli KTE12]
gi|430905160|gb|ELC26835.1| chaperone ClpB [Escherichia coli KTE16]
gi|430906999|gb|ELC28503.1| chaperone ClpB [Escherichia coli KTE15]
gi|430914786|gb|ELC35881.1| chaperone ClpB [Escherichia coli KTE25]
gi|430924187|gb|ELC44909.1| chaperone ClpB [Escherichia coli KTE21]
gi|430924628|gb|ELC45313.1| chaperone ClpB [Escherichia coli KTE26]
gi|430928806|gb|ELC49337.1| chaperone ClpB [Escherichia coli KTE28]
gi|430934408|gb|ELC54770.1| chaperone ClpB [Escherichia coli KTE39]
gi|430938174|gb|ELC58417.1| chaperone ClpB [Escherichia coli KTE44]
gi|430943395|gb|ELC63508.1| chaperone ClpB [Escherichia coli KTE178]
gi|430954358|gb|ELC73230.1| chaperone ClpB [Escherichia coli KTE181]
gi|430962645|gb|ELC80502.1| chaperone ClpB [Escherichia coli KTE188]
gi|430965485|gb|ELC82903.1| chaperone ClpB [Escherichia coli KTE189]
gi|430973433|gb|ELC90401.1| chaperone ClpB [Escherichia coli KTE191]
gi|430979217|gb|ELC96003.1| chaperone ClpB [Escherichia coli KTE193]
gi|430981147|gb|ELC97879.1| chaperone ClpB [Escherichia coli KTE201]
gi|430988061|gb|ELD04562.1| chaperone ClpB [Escherichia coli KTE204]
gi|430996977|gb|ELD13245.1| chaperone ClpB [Escherichia coli KTE206]
gi|431004123|gb|ELD19351.1| chaperone ClpB [Escherichia coli KTE208]
gi|431015033|gb|ELD28592.1| chaperone ClpB [Escherichia coli KTE212]
gi|431019262|gb|ELD32664.1| chaperone ClpB [Escherichia coli KTE213]
gi|431023908|gb|ELD37103.1| chaperone ClpB [Escherichia coli KTE214]
gi|431027660|gb|ELD40717.1| chaperone ClpB [Escherichia coli KTE216]
gi|431037409|gb|ELD48392.1| chaperone ClpB [Escherichia coli KTE220]
gi|431041280|gb|ELD51811.1| chaperone ClpB [Escherichia coli KTE224]
gi|431050018|gb|ELD59777.1| chaperone ClpB [Escherichia coli KTE228]
gi|431050645|gb|ELD60384.1| chaperone ClpB [Escherichia coli KTE230]
gi|431059324|gb|ELD68682.1| chaperone ClpB [Escherichia coli KTE234]
gi|431062621|gb|ELD71885.1| chaperone ClpB [Escherichia coli KTE233]
gi|431068692|gb|ELD77166.1| chaperone ClpB [Escherichia coli KTE235]
gi|431073596|gb|ELD81238.1| chaperone ClpB [Escherichia coli KTE236]
gi|431078889|gb|ELD85868.1| chaperone ClpB [Escherichia coli KTE237]
gi|431082715|gb|ELD89027.1| chaperone ClpB [Escherichia coli KTE47]
gi|431090181|gb|ELD95951.1| chaperone ClpB [Escherichia coli KTE49]
gi|431092570|gb|ELD98261.1| chaperone ClpB [Escherichia coli KTE51]
gi|431098769|gb|ELE04075.1| chaperone ClpB [Escherichia coli KTE53]
gi|431114090|gb|ELE17642.1| chaperone ClpB [Escherichia coli KTE56]
gi|431126882|gb|ELE29223.1| chaperone ClpB [Escherichia coli KTE60]
gi|431137420|gb|ELE39267.1| chaperone ClpB [Escherichia coli KTE67]
gi|431140270|gb|ELE42044.1| chaperone ClpB [Escherichia coli KTE66]
gi|431147630|gb|ELE48984.1| chaperone ClpB [Escherichia coli KTE72]
gi|431152924|gb|ELE53844.1| chaperone ClpB [Escherichia coli KTE75]
gi|431158219|gb|ELE58837.1| chaperone ClpB [Escherichia coli KTE76]
gi|431162309|gb|ELE62759.1| chaperone ClpB [Escherichia coli KTE77]
gi|431169228|gb|ELE69449.1| chaperone ClpB [Escherichia coli KTE80]
gi|431169930|gb|ELE70144.1| chaperone ClpB [Escherichia coli KTE81]
gi|431179497|gb|ELE79397.1| chaperone ClpB [Escherichia coli KTE86]
gi|431180932|gb|ELE80808.1| chaperone ClpB [Escherichia coli KTE83]
gi|431189556|gb|ELE88977.1| chaperone ClpB [Escherichia coli KTE87]
gi|431189973|gb|ELE89389.1| chaperone ClpB [Escherichia coli KTE93]
gi|431198760|gb|ELE97543.1| chaperone ClpB [Escherichia coli KTE111]
gi|431199842|gb|ELE98569.1| chaperone ClpB [Escherichia coli KTE116]
gi|431209975|gb|ELF08042.1| chaperone ClpB [Escherichia coli KTE119]
gi|431213521|gb|ELF11395.1| chaperone ClpB [Escherichia coli KTE142]
gi|431219520|gb|ELF16916.1| chaperone ClpB [Escherichia coli KTE143]
gi|431220903|gb|ELF18232.1| chaperone ClpB [Escherichia coli KTE156]
gi|431233024|gb|ELF28622.1| chaperone ClpB [Escherichia coli KTE162]
gi|431238051|gb|ELF32991.1| chaperone ClpB [Escherichia coli KTE161]
gi|431242251|gb|ELF36672.1| chaperone ClpB [Escherichia coli KTE171]
gi|431242452|gb|ELF36869.1| chaperone ClpB [Escherichia coli KTE169]
gi|431255423|gb|ELF48676.1| chaperone ClpB [Escherichia coli KTE8]
gi|431256994|gb|ELF49924.1| chaperone ClpB [Escherichia coli KTE6]
gi|431261505|gb|ELF53539.1| chaperone ClpB [Escherichia coli KTE9]
gi|431264650|gb|ELF56355.1| chaperone ClpB [Escherichia coli KTE17]
gi|431272401|gb|ELF63503.1| chaperone ClpB [Escherichia coli KTE18]
gi|431274084|gb|ELF65148.1| chaperone ClpB [Escherichia coli KTE45]
gi|431280926|gb|ELF71834.1| chaperone ClpB [Escherichia coli KTE42]
gi|431282813|gb|ELF73687.1| chaperone ClpB [Escherichia coli KTE23]
gi|431290737|gb|ELF81268.1| chaperone ClpB [Escherichia coli KTE43]
gi|431295668|gb|ELF85401.1| chaperone ClpB [Escherichia coli KTE29]
gi|431306883|gb|ELF95185.1| chaperone ClpB [Escherichia coli KTE46]
gi|431309349|gb|ELF97549.1| chaperone ClpB [Escherichia coli KTE48]
gi|431314008|gb|ELG01963.1| chaperone ClpB [Escherichia coli KTE50]
gi|431317134|gb|ELG04916.1| chaperone ClpB [Escherichia coli KTE54]
gi|431328930|gb|ELG16234.1| chaperone ClpB [Escherichia coli KTE63]
gi|431338743|gb|ELG25819.1| chaperone ClpB [Escherichia coli KTE78]
gi|431350931|gb|ELG37732.1| chaperone ClpB [Escherichia coli KTE79]
gi|431354165|gb|ELG40904.1| chaperone ClpB [Escherichia coli KTE91]
gi|431361324|gb|ELG47915.1| chaperone ClpB [Escherichia coli KTE101]
gi|431363452|gb|ELG50013.1| chaperone ClpB [Escherichia coli KTE115]
gi|431384371|gb|ELG68427.1| chaperone ClpB [Escherichia coli KTE135]
gi|431384440|gb|ELG68492.1| chaperone ClpB [Escherichia coli KTE136]
gi|431387893|gb|ELG71698.1| chaperone ClpB [Escherichia coli KTE140]
gi|431399103|gb|ELG82515.1| chaperone ClpB [Escherichia coli KTE144]
gi|431403787|gb|ELG87053.1| chaperone ClpB [Escherichia coli KTE146]
gi|431409810|gb|ELG92980.1| chaperone ClpB [Escherichia coli KTE147]
gi|431415458|gb|ELG98000.1| chaperone ClpB [Escherichia coli KTE158]
gi|431419496|gb|ELH01845.1| chaperone ClpB [Escherichia coli KTE154]
gi|431431290|gb|ELH13067.1| chaperone ClpB [Escherichia coli KTE194]
gi|431438678|gb|ELH20051.1| chaperone ClpB [Escherichia coli KTE190]
gi|431441763|gb|ELH22871.1| chaperone ClpB [Escherichia coli KTE173]
gi|431443123|gb|ELH24201.1| chaperone ClpB [Escherichia coli KTE175]
gi|431452017|gb|ELH32468.1| chaperone ClpB [Escherichia coli KTE184]
gi|431456101|gb|ELH36446.1| chaperone ClpB [Escherichia coli KTE196]
gi|431462584|gb|ELH42794.1| chaperone ClpB [Escherichia coli KTE183]
gi|431466555|gb|ELH46574.1| chaperone ClpB [Escherichia coli KTE197]
gi|431470083|gb|ELH50007.1| chaperone ClpB [Escherichia coli KTE203]
gi|431472383|gb|ELH52272.1| chaperone ClpB [Escherichia coli KTE202]
gi|431480655|gb|ELH60373.1| chaperone ClpB [Escherichia coli KTE207]
gi|431487782|gb|ELH67425.1| chaperone ClpB [Escherichia coli KTE209]
gi|431490475|gb|ELH70087.1| chaperone ClpB [Escherichia coli KTE211]
gi|431495771|gb|ELH75357.1| chaperone ClpB [Escherichia coli KTE217]
gi|431498854|gb|ELH78038.1| chaperone ClpB [Escherichia coli KTE215]
gi|431504081|gb|ELH82811.1| chaperone ClpB [Escherichia coli KTE218]
gi|431507559|gb|ELH85843.1| chaperone ClpB [Escherichia coli KTE223]
gi|431529587|gb|ELI06285.1| chaperone ClpB [Escherichia coli KTE104]
gi|431529629|gb|ELI06325.1| chaperone ClpB [Escherichia coli KTE105]
gi|431534093|gb|ELI10582.1| chaperone ClpB [Escherichia coli KTE106]
gi|431549278|gb|ELI23361.1| chaperone ClpB [Escherichia coli KTE112]
gi|431550430|gb|ELI24422.1| chaperone ClpB [Escherichia coli KTE113]
gi|431555156|gb|ELI29012.1| chaperone ClpB [Escherichia coli KTE117]
gi|431563643|gb|ELI36847.1| chaperone ClpB [Escherichia coli KTE120]
gi|431568097|gb|ELI41086.1| chaperone ClpB [Escherichia coli KTE124]
gi|431569328|gb|ELI42282.1| chaperone ClpB [Escherichia coli KTE122]
gi|431580227|gb|ELI52791.1| chaperone ClpB [Escherichia coli KTE125]
gi|431582551|gb|ELI54569.1| chaperone ClpB [Escherichia coli KTE128]
gi|431595513|gb|ELI65507.1| chaperone ClpB [Escherichia coli KTE131]
gi|431600784|gb|ELI70450.1| chaperone ClpB [Escherichia coli KTE133]
gi|431603838|gb|ELI73259.1| chaperone ClpB [Escherichia coli KTE137]
gi|431609405|gb|ELI78727.1| chaperone ClpB [Escherichia coli KTE138]
gi|431614621|gb|ELI83761.1| chaperone ClpB [Escherichia coli KTE139]
gi|431617973|gb|ELI86956.1| chaperone ClpB [Escherichia coli KTE145]
gi|431625959|gb|ELI94512.1| chaperone ClpB [Escherichia coli KTE148]
gi|431627373|gb|ELI95780.1| chaperone ClpB [Escherichia coli KTE150]
gi|431632983|gb|ELJ01266.1| chaperone ClpB [Escherichia coli KTE153]
gi|431643348|gb|ELJ11045.1| chaperone ClpB [Escherichia coli KTE160]
gi|431645363|gb|ELJ12919.1| chaperone ClpB [Escherichia coli KTE163]
gi|431655297|gb|ELJ22331.1| chaperone ClpB [Escherichia coli KTE166]
gi|431658892|gb|ELJ25800.1| chaperone ClpB [Escherichia coli KTE167]
gi|431660628|gb|ELJ27496.1| chaperone ClpB [Escherichia coli KTE168]
gi|431669569|gb|ELJ35988.1| chaperone ClpB [Escherichia coli KTE174]
gi|431676528|gb|ELJ42645.1| chaperone ClpB [Escherichia coli KTE177]
gi|431690895|gb|ELJ56363.1| chaperone ClpB [Escherichia coli KTE232]
gi|431699970|gb|ELJ64958.1| chaperone ClpB [Escherichia coli KTE82]
gi|431704983|gb|ELJ69606.1| chaperone ClpB [Escherichia coli KTE88]
gi|431714776|gb|ELJ78953.1| chaperone ClpB [Escherichia coli KTE90]
gi|431719711|gb|ELJ83762.1| chaperone ClpB [Escherichia coli KTE95]
gi|431719928|gb|ELJ83964.1| chaperone ClpB [Escherichia coli KTE94]
gi|431733804|gb|ELJ97209.1| chaperone ClpB [Escherichia coli KTE99]
gi|432345136|gb|ELL39657.1| protein disaggregation chaperone [Escherichia coli J96]
gi|432348189|gb|ELL42640.1| protein disaggregation chaperone [Escherichia coli J96]
gi|441609076|emb|CCP95295.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441651585|emb|CCQ02785.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441714329|emb|CCQ05567.1| ClpB protein [Escherichia coli Nissle 1917]
gi|443423155|gb|AGC88059.1| protein disaggregation chaperone [Escherichia coli APEC O78]
gi|444537635|gb|ELV17552.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
gi|444539174|gb|ELV18955.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
gi|444547063|gb|ELV25699.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
gi|444556894|gb|ELV34271.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
gi|444557506|gb|ELV34839.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
gi|444562805|gb|ELV39846.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
gi|444572407|gb|ELV48836.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
gi|444576359|gb|ELV52545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
gi|444578805|gb|ELV54837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
gi|444592734|gb|ELV67980.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
gi|444592782|gb|ELV68023.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
gi|444594598|gb|ELV69763.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
gi|444605840|gb|ELV80470.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
gi|444606504|gb|ELV81116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
gi|444615131|gb|ELV89343.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
gi|444622501|gb|ELV96453.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
gi|444623394|gb|ELV97316.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
gi|444629157|gb|ELW02870.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
gi|444637976|gb|ELW11332.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
gi|444640430|gb|ELW13694.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
gi|444644716|gb|ELW17818.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
gi|444653791|gb|ELW26495.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
gi|444659179|gb|ELW31606.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
gi|444663627|gb|ELW35842.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
gi|444669329|gb|ELW41316.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
gi|449316769|gb|EMD06874.1| protein disaggregation chaperone [Escherichia coli O08]
gi|449318506|gb|EMD08572.1| protein disaggregation chaperone [Escherichia coli S17]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|432889814|ref|ZP_20102920.1| chaperone ClpB [Escherichia coli KTE165]
gi|431433011|gb|ELH14685.1| chaperone ClpB [Escherichia coli KTE165]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|432466777|ref|ZP_19708864.1| chaperone ClpB [Escherichia coli KTE205]
gi|432582290|ref|ZP_19818703.1| chaperone ClpB [Escherichia coli KTE57]
gi|433073818|ref|ZP_20260468.1| chaperone ClpB [Escherichia coli KTE129]
gi|433121149|ref|ZP_20306817.1| chaperone ClpB [Escherichia coli KTE157]
gi|433184293|ref|ZP_20368537.1| chaperone ClpB [Escherichia coli KTE85]
gi|430993060|gb|ELD09419.1| chaperone ClpB [Escherichia coli KTE205]
gi|431121701|gb|ELE24580.1| chaperone ClpB [Escherichia coli KTE57]
gi|431586710|gb|ELI58097.1| chaperone ClpB [Escherichia coli KTE129]
gi|431641475|gb|ELJ09213.1| chaperone ClpB [Escherichia coli KTE157]
gi|431705027|gb|ELJ69647.1| chaperone ClpB [Escherichia coli KTE85]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLDVVSHNFRPEFINRIDEVVV 762
>gi|330795076|ref|XP_003285601.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
gi|325084423|gb|EGC37851.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
Length = 882
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 200/425 (47%), Gaps = 65/425 (15%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H ++I D AL +A++++ R L ++ ID++ + C N+R + + +
Sbjct: 358 ENHHGVRITDTALVVAAQLSH--RYITNRFLPDKAIDLVDEA---CANTRVQLNSQPEAI 412
Query: 79 KYFLRRAV---VEYEQLVKEDTDHS-SRSFWLRQIDNELKDAFFEL-VSFVKLRMQVE-- 131
RR + VE L KE+ D S R +R N + D L + K R +V+
Sbjct: 413 DNLERRKLQLEVEATALEKEEDDGSKQRLAAVRDELNNITDELQPLQAKYQKERTRVDKI 472
Query: 132 ------YDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKLAVDV 171
+D + DA+R + D K + Q + K+ L +V
Sbjct: 473 RELRRKLEDIKVKLLDAERRYDTQQAADYRYYVIPDLEKQIQQCEVERKQSKKDALVSEV 532
Query: 172 ---EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
E+IA+V S+ TGIP S ++R + + L KRV GQ++A+D + +A+ + +
Sbjct: 533 VTPEQIADVVSRWTGIPVSKLSQTEKQRLLHLGEHLHKRVVGQDEAVDAVADAVLR---S 589
Query: 229 KKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K GL+ Q LG FLF GP GK ELAKA+A EL+ D++ H+I DM Y E S+
Sbjct: 590 KSGLARENQPLGSFLFLGPTGVGKTELAKALAFELF---DDEKHMIRIDMSEYMEQHSVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYDQGGQLTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV---------YEVMLTATYGRVNEVTGSLFKPSLLKLL 386
D +N +IIMTS+L + + + + + +V F+P L L
Sbjct: 705 QGRTVDFSNVVIIMTSNLGSQYILQEQSNQDNFSTLSQSCKDKVTNEVRKHFRPEFLNRL 764
Query: 387 DKLVV 391
D ++V
Sbjct: 765 DDIIV 769
>gi|432802779|ref|ZP_20036748.1| chaperone ClpB [Escherichia coli KTE84]
gi|431347921|gb|ELG34798.1| chaperone ClpB [Escherichia coli KTE84]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|423109769|ref|ZP_17097464.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
gi|376381138|gb|EHS93877.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 196/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L KE D S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALKKESDDASIKR--LDMLNEELADKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYGHMKEMVLGVVSQSFRPEFINRIDEVVV 762
>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 204/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDIL---LKGIKRCLNSRDKYQKELDKH 78
H +QI D A+ A+ ++ R A +L ++ ID++ I+ ++S+ + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRLQIDSKPEPLDRLDRR 418
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------ 126
L+ +E + L+KED + S + L I +EL + E ++
Sbjct: 419 IIQLK---LEEQALLKEDDEGSRKRLQL--IRDELAEKEKEYAELEEVWKSEKAALAGTQ 473
Query: 127 RMQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+R D Y +I + Q+D + +E K V
Sbjct: 474 HIKAELEQVRQELEVARRASDLARMSELQYGRIPELEKQLDLAAQAEMQEQHLLKNRVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA+V S+ TGIP + +E+ +R++ L ++V GQN+A+D + A+ + +A G
Sbjct: 534 EEIADVLSRWTGIPVAKMLEGEKEKLLRMEDSLHEQVIGQNEAVDAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPVGSFLFMGPTGVGKTELCKALADFLFDSRDA---MVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS++ + + E + Y ++ EV G F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNIGSDLIQEHSASKDYDQMKAMLMEVLGHQFRPEFINRIDEIVV 762
>gi|15803116|ref|NP_289147.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
EDL933]
gi|26248955|ref|NP_754995.1| protein disaggregation chaperone [Escherichia coli CFT073]
gi|227888159|ref|ZP_04005964.1| endopeptidase Clp [Escherichia coli 83972]
gi|291283865|ref|YP_003500683.1| heat shock protein [Escherichia coli O55:H7 str. CB9615]
gi|293406102|ref|ZP_06650028.1| disaggregation chaperone [Escherichia coli FVEC1412]
gi|293415865|ref|ZP_06658505.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
gi|293448944|ref|ZP_06663365.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
gi|298381834|ref|ZP_06991431.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
coli FVEC1302]
gi|300819934|ref|ZP_07100117.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
gi|300900222|ref|ZP_07118408.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
gi|300905088|ref|ZP_07122895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
gi|300921136|ref|ZP_07137517.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
gi|300922524|ref|ZP_07138633.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
gi|300930683|ref|ZP_07146067.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
gi|300940371|ref|ZP_07154959.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
gi|300948986|ref|ZP_07163042.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
gi|300957375|ref|ZP_07169592.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
gi|300976570|ref|ZP_07173522.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
gi|300986851|ref|ZP_07177834.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
gi|301026352|ref|ZP_07189800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
gi|301050461|ref|ZP_07197343.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
gi|301305762|ref|ZP_07211849.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
gi|301326708|ref|ZP_07220026.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
gi|301644034|ref|ZP_07244052.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
gi|309794105|ref|ZP_07688529.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
gi|331643309|ref|ZP_08344440.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
gi|331648336|ref|ZP_08349424.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
gi|331678586|ref|ZP_08379260.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
gi|332280712|ref|ZP_08393125.1| heat shock protein [Shigella sp. D9]
gi|386630361|ref|YP_006150081.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i2']
gi|386635281|ref|YP_006155000.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i14']
gi|387883785|ref|YP_006314087.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
gi|415866944|ref|ZP_11539240.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
gi|415877635|ref|ZP_11543747.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
gi|422355470|ref|ZP_16436185.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
gi|422366379|ref|ZP_16446851.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
gi|422376237|ref|ZP_16456489.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
gi|422382964|ref|ZP_16463116.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
gi|25289895|pir||E85905 heat shock protein [imported] - Escherichia coli (strain O157:H7,
substrain EDL933)
gi|12517013|gb|AAG57705.1|AE005489_4 heat shock protein [Escherichia coli O157:H7 str. EDL933]
gi|26109361|gb|AAN81563.1|AE016764_245 ClpB protein [Escherichia coli CFT073]
gi|209762698|gb|ACI79661.1| heat shock protein [Escherichia coli]
gi|209762700|gb|ACI79662.1| heat shock protein [Escherichia coli]
gi|209762702|gb|ACI79663.1| heat shock protein [Escherichia coli]
gi|209762704|gb|ACI79664.1| heat shock protein [Escherichia coli]
gi|209762706|gb|ACI79665.1| heat shock protein [Escherichia coli]
gi|227834799|gb|EEJ45265.1| endopeptidase Clp [Escherichia coli 83972]
gi|290763738|gb|ADD57699.1| Heat shock protein [Escherichia coli O55:H7 str. CB9615]
gi|291322034|gb|EFE61463.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
gi|291426108|gb|EFE99140.1| disaggregation chaperone [Escherichia coli FVEC1412]
gi|291432054|gb|EFF05036.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
gi|298276974|gb|EFI18490.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
coli FVEC1302]
gi|300297832|gb|EFJ54217.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
gi|300308512|gb|EFJ63032.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
gi|300315878|gb|EFJ65662.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
gi|300356257|gb|EFJ72127.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
gi|300395567|gb|EFJ79105.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
gi|300403015|gb|EFJ86553.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
gi|300407861|gb|EFJ91399.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
gi|300411909|gb|EFJ95219.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
gi|300421136|gb|EFK04447.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
gi|300451543|gb|EFK15163.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
gi|300454825|gb|EFK18318.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
gi|300461457|gb|EFK24950.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
gi|300527522|gb|EFK48584.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
gi|300839016|gb|EFK66776.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
gi|300846631|gb|EFK74391.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
gi|301077608|gb|EFK92414.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
gi|308122010|gb|EFO59272.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
gi|315253120|gb|EFU33088.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
gi|315290939|gb|EFU50304.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
gi|324005832|gb|EGB75051.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
gi|324012458|gb|EGB81677.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
gi|324016581|gb|EGB85800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
gi|331036780|gb|EGI09004.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
gi|331042083|gb|EGI14225.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
gi|331073416|gb|EGI44737.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
gi|332103064|gb|EGJ06410.1| heat shock protein [Shigella sp. D9]
gi|342927877|gb|EGU96599.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
gi|355421260|gb|AER85457.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i2']
gi|355426180|gb|AER90376.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
i14']
gi|386797243|gb|AFJ30277.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
Length = 861
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 766
>gi|187733901|ref|YP_001881380.1| protein disaggregation chaperone [Shigella boydii CDC 3083-94]
gi|187430893|gb|ACD10167.1| ATP-dependent chaperone protein ClpB [Shigella boydii CDC 3083-94]
Length = 857
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|417744471|ref|ZP_12392995.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
gi|420342987|ref|ZP_14844456.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
gi|420374583|ref|ZP_14874550.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
gi|332765573|gb|EGJ95786.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
gi|391264802|gb|EIQ23787.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
gi|391316101|gb|EIQ73582.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
Length = 798
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 302 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 359
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 360 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 417
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI + Q++A ++ GK L V EI
Sbjct: 418 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 477
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 478 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 534
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 535 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 591
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 592 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 649
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 650 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 703
>gi|325267605|ref|ZP_08134257.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
gi|324980955|gb|EGC16615.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
Length = 858
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 199/418 (47%), Gaps = 62/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R ++ +++DK
Sbjct: 361 HGVEITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAASRIKIEKETKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL-----------VSFVKLR 127
+ + +E + KE + S + L ID E L+ + +L VS L+
Sbjct: 419 IIQLKMEKMHVSKESDEASKKRLAL--IDEEIAGLEKEYADLDEVWKAEKASAVSLTDLK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYS-----------KILDQI-DARVHGKFKE-----KLAVD 170
Q+ D+ + AKRV DY K+ Q+ DA G K + V
Sbjct: 477 AQI--DEIKHKIEQAKRVGDYGLASELEYGELPKLTLQLKDAERAGNQKTTNTLFRTEVG 534
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAE+ S++TGIP S E+ +R++ L RV GQ++A+ + +A+ + ++
Sbjct: 535 AEEIAEIVSRMTGIPVSKMMEGEREKLLRMEDVLHNRVVGQDEAVRAVADAIRR---SRS 591
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ + G FLF GP GK EL K +A+ L+D+ D HLI DM Y E S+
Sbjct: 592 GLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSED---HLIRVDMSEYMEKHSVARL 648
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 IGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 706
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVV 391
D NT+++MTS++ + + E+ A Y V + F+P L+ +D++VV
Sbjct: 707 RTVDFKNTVVVMTSNIGSQHIQELGAEAPYEAVKAAVMADVKDYFRPELINRIDEVVV 764
>gi|354724735|ref|ZP_09038950.1| protein disaggregation chaperone [Enterobacter mori LMG 25706]
Length = 857
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 201/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDV 171
++ E + + A+RV D Y KI + +I + GK L V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHNRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSHSFRPEFINRIDEVVV 762
>gi|424800712|ref|ZP_18226254.1| ClpB protein [Cronobacter sakazakii 696]
gi|429120813|ref|ZP_19181474.1| ClpB protein [Cronobacter sakazakii 680]
gi|423236433|emb|CCK08124.1| ClpB protein [Cronobacter sakazakii 696]
gi|426324731|emb|CCK12211.1| ClpB protein [Cronobacter sakazakii 680]
Length = 857
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 228/498 (45%), Gaps = 78/498 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVVIDLAVP 397
NT++IMTS+L + + E Y + E V G F+P + +D++VV P
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVVFH---P 765
Query: 398 LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG-------EG 450
L + + + +R D VHI+ +A + G+NG
Sbjct: 766 LGQKHIASIAQIQLQRLYQRLEDRGYA---------VHISDDALQLLGENGYDPVYGARP 816
Query: 451 LKRWMDQR---PSADHVI 465
LKR + Q+ P A ++
Sbjct: 817 LKRAIQQQIENPLAQQIL 834
>gi|328951491|ref|YP_004368826.1| ATP-dependent chaperone ClpB [Marinithermus hydrothermalis DSM
14884]
gi|328451815|gb|AEB12716.1| ATP-dependent chaperone ClpB [Marinithermus hydrothermalis DSM
14884]
Length = 855
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 204/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRC---LNSRDKYQKELDKH 78
H ++I D A+ A+ ++ R L ++ ID++ + R L S + L++
Sbjct: 353 HGVRIADPAIVAAAVLSH--RYITDRRLPDKAIDLVDEAASRLRMQLESSPEAIDTLERK 410
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELV-----------SFVKLR 127
K L +E E L KE D SR+ L I+NEL+ ++ + KLR
Sbjct: 411 KLQLE---IEREALKKE-KDPDSRA-QLEAIENELEQLNAQIAQMRAEWEAEREALQKLR 465
Query: 128 -MQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV--------HGKFKEKLAVDV 171
Q + D+ + + A+R D +K +L +++ V H +F +L V
Sbjct: 466 EAQKKLDETRTAIEQAERSYDLNKAAELRYGVLPKLEHEVEALSEKLKHARFV-RLEVTE 524
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E+IAEV S+ TGIP + E+ +R++ L+KRV GQ++AI + +A+ + +A K
Sbjct: 525 EDIAEVVSRWTGIPVAKLLEGEREKLVRLEDELRKRVVGQDEAIVAVADAIRRARAGLK- 583
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK +A L+D+ + ++ DM Y E ++
Sbjct: 584 -DPNRPIGSFLFLGPTGVGKTELAKTLAATLFDSEEA---MVRIDMTEYMEKHAVARLIG 639
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +V+++PY+V+LFD+IEKA+ + N+LL+IL D R
Sbjct: 640 APPGYVGYEEGGQLTEVVRRKPYTVILFDEIEKAHPDVFNILLQIL--DDGRLTDSHGRV 697
Query: 340 FDLTNTLIIMTSDLKDEQVYE-VMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+II+TS+L + E + ++Y RV V F+P L LD+++V
Sbjct: 698 VDFRNTVIILTSNLGSPLILEGIQQGSSYEGIRERVFRVLQEHFRPEFLNRLDEIIV 754
>gi|114321705|ref|YP_743388.1| ATPase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228099|gb|ABI57898.1| ATPase AAA-2 domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 864
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 203/416 (48%), Gaps = 60/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R +L ++ ID++ + R D +E+D+ +
Sbjct: 360 HGVEITDPAIVAAAQLSH--RYITDRQLPDKAIDLVDEAASRIKMEIDSKPEEMDRLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSF-WLRQIDNELKDAFFELVSF-----------VKLRMQ 129
L + +E E L KE+ D S + L NEL+D + L ++ Q
Sbjct: 418 LIQLKIEREALAKEEDDASRKRLDALEGEINELEDEYKALEEIWNSEKAAVEGTQSIKEQ 477
Query: 130 VEYD----DFVSCVHDAKRVKD--YSKILD---QID----ARVHGKFKEKLAVDVEEIAE 176
+E D D R+ + Y +I + Q+D A +H + +V EEIAE
Sbjct: 478 LERARQELDTARRAGDLGRMSELQYGRIPELERQLDLALQAEMHDTQLLRTSVGTEEIAE 537
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S+ TGIP S ++ +R++ ++KRV GQ++A+ + A+ + +A GLS
Sbjct: 538 VVSRWTGIPVSKMLEGERDKLLRMEEEIRKRVVGQDEAVAAVANAIRRSRA---GLSDPN 594
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK EL KA+A+ L+D + +I DM + E ++ +
Sbjct: 595 RPNGSFLFLGPTGVGKTELCKALASFLFDTEEA---MIRVDMSEFMEKHAVARLIGAPPG 651
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V+++PYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 652 YVGYEEGGYLTEHVRRKPYSVILLDEVEKAHADVFNVLLQVL--DDGRLTDSHGRTVDFR 709
Query: 344 NTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L E+ Y+ M +A V E+ G+ F+P + +D++VV
Sbjct: 710 NTVIVMTSNLGSDVIQQMAGEEHYQEMRSA----VMEIVGTHFRPEFINRVDEVVV 761
>gi|156932865|ref|YP_001436781.1| protein disaggregation chaperone [Cronobacter sakazakii ATCC
BAA-894]
gi|156531119|gb|ABU75945.1| hypothetical protein ESA_00662 [Cronobacter sakazakii ATCC BAA-894]
Length = 861
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 228/498 (45%), Gaps = 78/498 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVVIDLAVP 397
NT++IMTS+L + + E Y + E V G F+P + +D++VV P
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVVFH---P 769
Query: 398 LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG-------EG 450
L + + + +R D VHI+ +A + G+NG
Sbjct: 770 LGQKHIASIAQIQLQRLYQRLEDRGYA---------VHISDDALQLLGENGYDPVYGARP 820
Query: 451 LKRWMDQR---PSADHVI 465
LKR + Q+ P A ++
Sbjct: 821 LKRAIQQQIENPLAQQIL 838
>gi|383759106|ref|YP_005438091.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
gelatinosus IL144]
gi|381379775|dbj|BAL96592.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
gelatinosus IL144]
Length = 864
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 205/438 (46%), Gaps = 99/438 (22%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKG---IKRCLNSRDKYQKELDKH 78
H ++I D A+ A+ ++ R L ++ ID++ + IK ++S+ + LD+
Sbjct: 360 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRR 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
L+ +E E + KE + S R L I++EL L++Q EY+D
Sbjct: 418 MIQLK---IEREAVKKEQDEASQRRLGL--IEDEL------------LKLQREYNDLEEI 460
Query: 139 ------------------------VHDAKRVKDYSKI-------LDQIDARVH------- 160
+ + KR D++++ L ++D R+
Sbjct: 461 WTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVAELQYGKLPELDKRLKEAQAKEA 520
Query: 161 GKFKE-------KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQND 213
GK K + V EEIAEV S+ TGIP S ++ ++++ +L +RV GQ++
Sbjct: 521 GKAKGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDKLLQMEAKLHERVVGQDE 580
Query: 214 AIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
AI + +A+ + +A GLS R LG FLF GP GK EL KA+A+ L+D+ D H+
Sbjct: 581 AISAVADAIRRSRA---GLSDPNRPLGSFLFLGPTGVGKTELCKALASFLFDSED---HM 634
Query: 273 IHFDMGNYTELESIKHF---------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNL 320
I DM Y E S+ +D AL V+++PYSV+L D++EKA+ + N+
Sbjct: 635 IRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSVLLLDEVEKAHPDVFNV 694
Query: 321 LLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDE-------QVYEVMLTATYGRVNEV 373
LL++L D R D NT+I+MTS+L Q EV+ A + V
Sbjct: 695 LLQVL--DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMSGQPNEVVREAVWAEVK-- 750
Query: 374 TGSLFKPSLLKLLDKLVV 391
S F+P L +D+ VV
Sbjct: 751 --SHFRPEFLNRIDETVV 766
>gi|260598973|ref|YP_003211544.1| protein disaggregation chaperone [Cronobacter turicensis z3032]
gi|260218150|emb|CBA32972.1| Chaperone protein clpB [Cronobacter turicensis z3032]
Length = 857
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMLESERDKLLRMEEDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V G F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVV 762
>gi|417789785|ref|ZP_12437399.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
gi|429115632|ref|ZP_19176550.1| ClpB protein [Cronobacter sakazakii 701]
gi|449307191|ref|YP_007439547.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
gi|333956142|gb|EGL73831.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
gi|426318761|emb|CCK02663.1| ClpB protein [Cronobacter sakazakii 701]
gi|449097224|gb|AGE85258.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
Length = 857
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 228/498 (45%), Gaps = 78/498 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNDELADKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVVIDLAVP 397
NT++IMTS+L + + E Y + E V G F+P + +D++VV P
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVVFH---P 765
Query: 398 LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG-------EG 450
L + + + +R D VHI+ +A + G+NG
Sbjct: 766 LGQKHIASIAQIQLQRLYQRLEDRGYA---------VHISDDALQLLGENGYDPVYGARP 816
Query: 451 LKRWMDQR---PSADHVI 465
LKR + Q+ P A ++
Sbjct: 817 LKRAIQQQIENPLAQQIL 834
>gi|315635103|ref|ZP_07890381.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
gi|315476065|gb|EFU66819.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
Length = 856
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 196/417 (47%), Gaps = 63/417 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRK--RLEMLEKELSEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E ++ + + A+R D SK+ + Q+ A + KE + V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPELEKQLAAAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP S +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVSKMMEGEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDL-------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L E+ Y+ M T V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNQEESYDDMKTL----VMSVVSQHFRPEFINRIDETVV 761
>gi|455643273|gb|EMF22401.1| protein disaggregation chaperone [Citrobacter freundii GTC 09479]
Length = 857
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVV 762
>gi|294666951|ref|ZP_06732180.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603240|gb|EFF46662.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 859
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 417 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 476
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 477 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 535 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 707 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 763
>gi|294624966|ref|ZP_06703618.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600729|gb|EFF44814.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 861
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|223041973|ref|ZP_03612157.1| chaperone ClpB [Actinobacillus minor 202]
gi|223017230|gb|EEF15658.1| chaperone ClpB [Actinobacillus minor 202]
Length = 857
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 26/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +++ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKDKLLRMENVLHTRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + E M A+YG + EV S+ F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQE-MPNASYGELKEVVMSVVSQHFRPEFINRIDETVV 761
>gi|288550291|ref|ZP_06390995.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
ATCC 35316]
gi|288315678|gb|EFC54616.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
ATCC 35316]
Length = 861
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 201/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 418
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL + + EL K
Sbjct: 419 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDEKERQYSELEEEWKAEKASLSGTQ 477
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDV 171
++ E + + A+RV D Y KI + +I + GK L V
Sbjct: 478 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTD 537
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 538 AEIAEVLARWTGIPVARMLESEREKLLRMEQDLHHRVIGQNEAVEAVSNAIRRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLV 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + E V F+P + +D++VV
Sbjct: 710 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKELVMGVVSHSFRPEFINRIDEVVV 766
>gi|311278478|ref|YP_003940709.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
gi|308747673|gb|ADO47425.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
Length = 857
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------L 126
L R +++ +Q +K+++D +SR L ++ EL D + + +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASRK-RLDMLNEELDDKERQYSALEEEWKAEKASLSGTQ 473
Query: 127 RMQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSHSFRPEFINRIDEVVV 762
>gi|381172820|ref|ZP_09881938.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686745|emb|CCG38425.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 859
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 202/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFEL-----------VSFVKLRMQ 129
L + ++ E L KE + S + + D ++L+ F +L K++ Q
Sbjct: 417 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAVLQGTTKIKEQ 476
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 477 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 535 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 707 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 763
>gi|237729507|ref|ZP_04559988.1| disaggregation chaperone [Citrobacter sp. 30_2]
gi|226908113|gb|EEH94031.1| disaggregation chaperone [Citrobacter sp. 30_2]
Length = 861
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVV 766
>gi|421846352|ref|ZP_16279501.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411772505|gb|EKS56120.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 857
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVV 762
>gi|325924771|ref|ZP_08186207.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
gi|325544787|gb|EGD16134.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
Length = 861
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|429093582|ref|ZP_19156164.1| ClpB protein [Cronobacter dublinensis 1210]
gi|426741478|emb|CCJ82277.1| ClpB protein [Cronobacter dublinensis 1210]
Length = 861
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+ +
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+ + +E + L+KE + S + L +++EL D + + + ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNDELNDKERQYSTLEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V G F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVV 766
>gi|359430144|ref|ZP_09221157.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
gi|358234361|dbj|GAB02696.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
Length = 859
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 196/414 (47%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS--FWLRQIDNELKDAFFELVSFVKL---------RMQV 130
L + ++ E VK+D D S++ L Q E + + +L K + QV
Sbjct: 416 LIQLKMQLEA-VKKDEDSGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQV 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D S + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARSALEKAKREGDLAEAARLQYGVIPELQKRLEQAEVAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP S E+ + ++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVSKMLQGEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ AT V V G F+P + +D+LVV
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGEGATDDEVRAVVMNAVGQHFRPEFINRIDELVV 760
>gi|418516808|ref|ZP_13082978.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410706405|gb|EKQ64865.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 861
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|429085706|ref|ZP_19148669.1| ClpB protein [Cronobacter condimenti 1330]
gi|426545026|emb|CCJ74710.1| ClpB protein [Cronobacter condimenti 1330]
Length = 861
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+ + +E + L+KE + S + L +++EL D + + + ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNDELTDKERQYSALEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDSL 293
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +L
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAL 654
Query: 294 AAL------------VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V G F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVV 766
>gi|354613927|ref|ZP_09031824.1| ATPase AAA-2 domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353221737|gb|EHB86078.1| ATPase AAA-2 domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 692
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 127/250 (50%), Gaps = 32/250 (12%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V VEEIAEV S+LTGIPAS + ++R R++ L +RV GQ+DA+ + A+ + +
Sbjct: 348 VTVEEIAEVVSRLTGIPASTLTEREKQRLRRLESELHQRVIGQDDAVTAVSRAVRRNRTG 407
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
R +G FLF GP GK ELAKA+A L+ + DN +I DM + E ++
Sbjct: 408 MN--DPDRPVGTFLFLGPTGVGKTELAKALAGSLFGDEDN---MIRLDMSEFGERHTVSR 462
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
S L V++RPYSV+L D+IEKA+ + NLLL++ D R
Sbjct: 463 LVGSPPGYVGYDESGQLTEKVRRRPYSVILLDEIEKAHPDVFNLLLQVF--DDGRLTDGQ 520
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATY-GRVNEVTGSL------------FKPSLL 383
+ TNT++IMTS+L E + + G E +G F+P L
Sbjct: 521 GRTVNFTNTVLIMTSNLGSEIISSRSGEFGFSGPAQESSGKAVRDRLMGKLRESFRPEFL 580
Query: 384 KLLDKLVVID 393
+D++VV D
Sbjct: 581 NRVDEIVVFD 590
>gi|336451274|ref|ZP_08621714.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
gi|336281891|gb|EGN75154.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
Length = 857
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 205/424 (48%), Gaps = 59/424 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D +ELD+ +
Sbjct: 361 HSVEITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVS-FVKLRMQVEYDDFVS 137
+ + +E + L KE D S + L + NEL + A+ EL + + +M V+ +
Sbjct: 419 IIQLKIEQQALAKEKDDASKKR--LETLSNELSELEGAYAELETVWNSEKMAVQGHQHIK 476
Query: 138 CVHD--------AKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ D A R +D Y KI + Q++A + + +E + V EEI
Sbjct: 477 ELLDQARNDLEIANRARDLNRMAELQYGKIPELEHQLEAALSAEMQEMTLLRNRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP S E+ ++++ L +RV GQ++A+ + ++ + +A GLS
Sbjct: 537 AEVLSRWTGIPVSRMLEGEREKLLQMEDNLHQRVVGQHEAVVAVANSIRRSRA---GLSD 593
Query: 235 R-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A ++D++D ++ DM + E S+ +
Sbjct: 594 PDRPIGSFLFLGPTGVGKTELCKALARFMFDSDDA---MVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVL D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKD----EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAVP 397
NT+IIMTS+L E EV + +V + FKP L +D+ VV P
Sbjct: 709 FRNTVIIMTSNLGSHLIQEHAGEVQYEEMKAMLGDVLRTAFKPEFLNRIDETVVFH---P 765
Query: 398 LLDT 401
L D+
Sbjct: 766 LADS 769
>gi|395231533|ref|ZP_10409821.1| disaggregation chaperone [Citrobacter sp. A1]
gi|424734303|ref|ZP_18162842.1| protein disaggregation chaperone [Citrobacter sp. L17]
gi|394714742|gb|EJF20646.1| disaggregation chaperone [Citrobacter sp. A1]
gi|422891883|gb|EKU31894.1| protein disaggregation chaperone [Citrobacter sp. L17]
Length = 857
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKECQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVV 762
>gi|254478026|ref|ZP_05091410.1| ATP-dependent chaperone ClpB [Carboxydibrachium pacificum DSM
12653]
gi|214036030|gb|EEB76720.1| ATP-dependent chaperone ClpB [Carboxydibrachium pacificum DSM
12653]
Length = 864
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 133/249 (53%), Gaps = 31/249 (12%)
Query: 163 FKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
KEK V EEIA++ SK TGIP + ++ + + L +RV GQ++AI+ + A+
Sbjct: 532 LKEK--VTEEEIAKIVSKWTGIPVTKLIETERQKILELDKILHRRVVGQDEAIEAVCNAI 589
Query: 223 TKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ +A K L RR +G FLF GP GK ELAKA+A L+ D++N++I DM Y E
Sbjct: 590 MRARAGMKDL--RRPIGSFLFLGPTGVGKTELAKALAEALF---DSENNMIRIDMTEYME 644
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ + L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D
Sbjct: 645 KHSVSKLIGAPPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNILLQIM--DDG 702
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSL 382
R D NT+IIMTS+L E Y + + G ++E T L F+P
Sbjct: 703 RLTDSKGKTIDFKNTIIIMTSNLGSE--YLLNANISNGEIDEKTKQLIDGELKMHFRPEF 760
Query: 383 LKLLDKLVV 391
L LD++++
Sbjct: 761 LNRLDEIII 769
>gi|383761689|ref|YP_005440671.1| chaperone ClpB [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381957|dbj|BAL98773.1| chaperone ClpB [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 864
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 139/258 (53%), Gaps = 25/258 (9%)
Query: 152 LDQIDARVHGKFKE----KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKR 207
L Q +ARV K+ K VD EEIAEV SK TGIP S E+ +R++ L +R
Sbjct: 513 LAQANARVQELQKQGALLKEEVDAEEIAEVVSKWTGIPVSKLLESEREKLLRMEEYLHRR 572
Query: 208 VFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNND 267
V GQ++A+ + A+ + +A + R +G F+F GP +GK ELA+++A L+ D
Sbjct: 573 VVGQDEAVRAVANAIRRSRAGLQ--DPNRPIGSFIFLGPTGTGKTELARSLAEYLF---D 627
Query: 268 NDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANS 315
++ LI DM Y E ++ + L V++RPYSVVLFD+IEKA+
Sbjct: 628 DERALIRIDMSEYQERHTVARLIGAPPGYIGYDEGGQLTEAVRRRPYSVVLFDEIEKAHP 687
Query: 316 SILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEV--MLTATYGRVNEV 373
+ N+LL++L D R D NT+IIMTS+L + + +V + RV EV
Sbjct: 688 EVFNVLLQVL--DDGRLTDSQGRTVDFKNTVIIMTSNLGSQYILDVAEVDEEVERRVREV 745
Query: 374 TGSLFKPSLLKLLDKLVV 391
S F+P L +D++VV
Sbjct: 746 LRSHFRPEFLNRIDEIVV 763
>gi|384429028|ref|YP_005638388.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
gi|341938131|gb|AEL08270.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
Length = 859
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 201/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 417 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 476
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 477 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L +RV GQ +AI V+ +A+ + +A GLS
Sbjct: 535 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVSRLIGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA++ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 707 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 763
>gi|389839942|ref|YP_006342026.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
gi|387850418|gb|AFJ98515.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
Length = 857
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 230/498 (46%), Gaps = 78/498 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L +++EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKI--LDQIDA---RVHGKFKEKL--AVDVEEI 174
E + + A+RV D Y KI L+++ A + GK L V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKLLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVVIDLAVP 397
NT++IMTS+L + + E Y + E V G F+P + +D++VV P
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVVFH---P 765
Query: 398 LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNG-------EG 450
L + + + +R D VHI+ +A + G+NG
Sbjct: 766 LGQKHIASIAQIQLQRLYQRLEDRGYA---------VHISDDALQLLGENGYDPVYGARP 816
Query: 451 LKRWMDQR---PSADHVI 465
LKR + Q+ P A ++
Sbjct: 817 LKRAIQQQIENPLAQQIL 834
>gi|332528193|ref|ZP_08404221.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
gi|332112761|gb|EGJ12554.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
Length = 864
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 203/438 (46%), Gaps = 99/438 (22%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKG---IKRCLNSRDKYQKELDKH 78
H ++I D A+ A+ ++ R L ++ ID++ + IK ++S+ + LD+
Sbjct: 360 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRR 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
L+ +E E + KE + S R L I+ EL L++Q EY+D
Sbjct: 418 MIQLK---IEREAVKKEQDEASQRRLGL--IEEEL------------LKLQREYNDLEEI 460
Query: 139 ------------------------VHDAKRVKDYSKI--------------LDQIDARVH 160
+ + KR D++++ L + A+
Sbjct: 461 WTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVAELQYGKLPELEKRLKEAQAKEA 520
Query: 161 GKFKE-------KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQND 213
GK + + V EEIAEV S+ TGIP S ++ ++++ RL +RV GQ++
Sbjct: 521 GKAQGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQGERDKLLQMESRLHERVVGQDE 580
Query: 214 AIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
AI + +A+ + +A GLS R LG FLF GP GK EL KA+A+ L+D+ D H+
Sbjct: 581 AIVAVADAIRRSRA---GLSDPNRPLGSFLFLGPTGVGKTELCKALASFLFDSED---HM 634
Query: 273 IHFDMGNYTELESIKHF---------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNL 320
I DM Y E S+ +D AL V+++PYSV+L D++EKA+ + N+
Sbjct: 635 IRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSVLLLDEVEKAHPDVFNV 694
Query: 321 LLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDE-------QVYEVMLTATYGRVNEV 373
LL++L D R D NT+I+MTS+L Q E++ A +G V
Sbjct: 695 LLQVL--DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQPTELVREAVWGEVK-- 750
Query: 374 TGSLFKPSLLKLLDKLVV 391
S F+P L +D+ VV
Sbjct: 751 --SHFRPEFLNRIDEAVV 766
>gi|432432832|ref|ZP_19675258.1| chaperone ClpB [Escherichia coli KTE187]
gi|432845561|ref|ZP_20078344.1| chaperone ClpB [Escherichia coli KTE141]
gi|433208716|ref|ZP_20392389.1| chaperone ClpB [Escherichia coli KTE97]
gi|430951678|gb|ELC70893.1| chaperone ClpB [Escherichia coli KTE187]
gi|431394006|gb|ELG77549.1| chaperone ClpB [Escherichia coli KTE141]
gi|431729349|gb|ELJ92981.1| chaperone ClpB [Escherichia coli KTE97]
Length = 857
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL--AVDVEEI 174
E + + A+R+ D Y KI + Q++A ++ GK L V EI
Sbjct: 477 AELEQAKIAIEQARRMGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762
>gi|389580929|ref|ZP_10170956.1| ATP-dependent chaperone ClpB [Desulfobacter postgatei 2ac9]
gi|389402564|gb|EIM64786.1| ATP-dependent chaperone ClpB [Desulfobacter postgatei 2ac9]
Length = 869
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 200/419 (47%), Gaps = 63/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R A L ++ ID++ + R D + +D+ +
Sbjct: 359 HGIRIKDSALVAAATLSH--RYIADRFLPDKAIDLIDECASRLRIEIDSMPRAIDEIQRR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLR-------------M 128
L +A +E + L+KE D +SR L ++ + A E + +KL M
Sbjct: 417 LTQAAIERQALIKE-KDKASRE-RLEHLEKNIA-AMEEEIRPLKLHWDNEKSIIREISAM 473
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILDQID----ARVHGKFKEK-------------LAVDV 171
+ + D F + A+R D++K+ QI A ++ K +EK L DV
Sbjct: 474 REDIDRFQTEAQLAERAGDFAKVA-QIRYGNIADLNRKIEEKKQSLDTLQQTCKMLKEDV 532
Query: 172 EE--IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EE +AEV S TGIP S +E+ + ++ + KRV GQ +AID + A+ + A+
Sbjct: 533 EEADVAEVVSTWTGIPVSKMLQGEQEKLITMESHISKRVIGQENAIDAVSNAVRR---AR 589
Query: 230 KGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GL R +G F+F GP GK ELAKA+A ++D+ D ++ DM Y E S+
Sbjct: 590 SGLQPEDRPIGTFIFMGPTGVGKTELAKALAEFMFDSRDA---MVRLDMSEYMEKHSVAR 646
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+LFD+IEKA+ + N+LL+ L D R
Sbjct: 647 LIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNILLQAL--DDGRMTDGH 704
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTA----TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + E + V + + F+P L +D+++
Sbjct: 705 GRTVDFRNTIIIMTSNIGSRILLEAGKSGFSEEVEQAVQQALKAAFRPEFLNRIDEIIT 763
>gi|21232500|ref|NP_638417.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767416|ref|YP_242178.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990519|ref|YP_001902529.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris
str. B100]
gi|54035864|sp|Q8P6A0.1|CLPB_XANCP RecName: Full=Chaperone protein ClpB
gi|21114288|gb|AAM42341.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572748|gb|AAY48158.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732279|emb|CAP50471.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
Length = 861
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 201/417 (48%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L +RV GQ +AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVSRLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|78048880|ref|YP_365055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037310|emb|CAJ25055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 861
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V EEI
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDDLHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|375085622|ref|ZP_09732254.1| ATP-dependent chaperone ClpB [Megamonas funiformis YIT 11815]
gi|374567033|gb|EHR38265.1| ATP-dependent chaperone ClpB [Megamonas funiformis YIT 11815]
Length = 862
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 202/411 (49%), Gaps = 51/411 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R + L ++ ID++ + + + + ++K +
Sbjct: 360 HGVRIRDNALVSAAVLSD--RYISDRFLPDKAIDLVDEAAAKLRTEIESMPEPIEKLRRK 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID---------NELKDAF-FELVSFVKLR-MQV 130
+ + +E E L KE TD +S+ + ID NELK + E V++R ++
Sbjct: 418 IMQLQIEEEALNKE-TDEASKEKLAKLIDEKTKLQNEENELKTKWDREKQGIVRVRAIKK 476
Query: 131 EYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVDVEE 173
E D + + A+R DY+K L++++ VH + +L V E+
Sbjct: 477 EMDSANTEMEKAQRSGDYAKASEIKYGKLPQLQKELEEMEKAVHDEEGNRLLKEEVSEED 536
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V S+ TGIP + T E+ + ++ L +RV GQ++A+ + EA+ + +A K
Sbjct: 537 IAQVVSRWTGIPVTKMLTGEREKLVHLEDVLHERVVGQDEAVKAVSEAIIRARAGIK--D 594
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK ELAK +A L+ D++ +I DM Y E S+ +
Sbjct: 595 PNRPIGSFIFLGPTGVGKTELAKTLAESLF---DDERSIIRIDMSEYMEKHSVARLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D+IEKA+ + N+LL+IL D R +
Sbjct: 652 PGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLLQIL--DDGRLTDGKGRVVN 709
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR-VNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L ++ AT + V ++ F+P L +D ++V
Sbjct: 710 FKNTVIIMTSNLGSHEILNQEDFATAEKLVRDILKDYFRPEFLNRVDDIIV 760
>gi|379708456|ref|YP_005263661.1| ATP-dependent Clp protease ATP-binding subunit clpC [Nocardia
cyriacigeorgica GUH-2]
gi|374845955|emb|CCF63025.1| ATP-dependent Clp protease ATP-binding subunit clpC [Nocardia
cyriacigeorgica GUH-2]
Length = 819
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 45/273 (16%)
Query: 165 EKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTK 224
E V V +IAEV S+ TGIP S T+ +R + ++ L KRV GQ++AI + EA+ +
Sbjct: 477 EAPQVTVTDIAEVISRQTGIPVSELTTEERQRLLGLEDVLHKRVIGQDEAIVAVAEAVRR 536
Query: 225 PKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELE 284
+A K R +G FLF GP GK ELAKA+A ++ + D LI FDM + E
Sbjct: 537 ARAGLK--DPNRPIGSFLFLGPTGVGKTELAKALAEAVFGDED---RLIRFDMSEFQEKH 591
Query: 285 SIKHF---------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRK 332
++ +D A L V+++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 592 TVSRLVGAPPGYVGYDDAAQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLL--DDGRV 649
Query: 333 ATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL-------FKPSLLKL 385
D NT++IMTS++ +++L+A G ++ +T +L F+P L
Sbjct: 650 TDSKGRTVDFKNTIVIMTSNIGS----DLILSAPDGDLDSITPTLNERLRSHFRPEFLNR 705
Query: 386 LDKLVV------------IDLAVPLLDTTRLLL 406
+D +V +DL +LD TR LL
Sbjct: 706 IDDTIVFHRLDQAQIHRIVDL---VLDGTRRLL 735
>gi|157148104|ref|YP_001455423.1| protein disaggregation chaperone [Citrobacter koseri ATCC BAA-895]
gi|157085309|gb|ABV14987.1| hypothetical protein CKO_03914 [Citrobacter koseri ATCC BAA-895]
Length = 861
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GL+
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLAD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E YG + E V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYGHMKELVLGVVSHNFRPEFINRIDEVVV 766
>gi|71730024|gb|EAO32116.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
Length = 861
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 196/418 (46%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE------------LVSFVKLRMQ 129
L + ++ E L KE + S + + D E+ D F L K++
Sbjct: 419 LIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKES 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I V +++L V EE
Sbjct: 479 IEQAKL--DLEAAQRRQDYAK-MSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S ++ +R++ L +RV GQ++AI V+ +A+ + ++ GLS
Sbjct: 536 IAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQDEAIKVVSDAVRR---SRTGLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D+ D ++ DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDA---MVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L L ++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTELARRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ + T V V F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSHQIQELSGDDSPEVYTQMKAAVMGVVQVHFRPEFINRLDDIVV 765
>gi|269926323|ref|YP_003322946.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
gi|269789983|gb|ACZ42124.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
Length = 867
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R + L ++ ID++ + + D ELD+ +
Sbjct: 361 HGVRIRDSALVAAAVLSH--RYISDRFLPDKAIDLVDEAASKIRMEIDSMPVELDELERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE---------- 131
+ + +E E L KE TD +S+ L ++ EL D + + LRMQ E
Sbjct: 419 ILQLEIEREALKKE-TDEASKE-RLANLEKELADLKEKREA---LRMQWEREKSLLQEIN 473
Query: 132 -----YDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKLA----------- 168
D + A+R DY++ L ++ R+ + +E+LA
Sbjct: 474 SVKESIDRVKHEIEQAERNYDYNRAAQLKYSDLTNLERRLK-ELEEQLARTSENRMVQEE 532
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IAEV S+ TGIP S + E+ + ++ L++RV GQ++AI + A+ +AA
Sbjct: 533 VTEEDIAEVVSRWTGIPVSKLLSGEVEKLIHMEEYLRQRVVGQDEAISAVANAI---RAA 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R +G FLF GP GK E A+A+A L+D+ + ++ DM Y E S+
Sbjct: 590 RAGLQDPNRPIGSFLFLGPTGVGKTETARALAEFLFDD---ERAMVRIDMSEYGEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSV+LFD++EKA+ +LN+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEAGQLTEAVRRRPYSVILFDEVEKAHPEVLNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT--ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E L+ RV + + F+P L+ +D++V+
Sbjct: 705 QGRTVDFRNTIIIMTSNLGSQWIMEPGLSWDEVRSRVMDAVRAHFRPELINRIDEIVI 762
>gi|281424641|ref|ZP_06255554.1| ATP-dependent chaperone protein ClpB [Prevotella oris F0302]
gi|299142336|ref|ZP_07035468.1| ATP-dependent chaperone protein ClpB [Prevotella oris C735]
gi|281401229|gb|EFB32060.1| ATP-dependent chaperone protein ClpB [Prevotella oris F0302]
gi|298576058|gb|EFI47932.1| ATP-dependent chaperone protein ClpB [Prevotella oris C735]
Length = 827
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 60/419 (14%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H+++IQD+A A ++++ R + L ++ ID++ + + RD +ELD+
Sbjct: 356 ENHHKVRIQDDACIAAVKLSE--RYISDRFLPDKAIDLMDEAAAKLRMERDSVPEELDEM 413
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE------- 131
+ L++ +E + +++ED + Q++ E+ + E V+ + R Q +
Sbjct: 414 ERSLKQKEIERQAILREDDQQK-----IAQLEKEIAE-LKEKVNAFRARWQAQKGEVDHI 467
Query: 132 ------YDDFVSCVHDAKRVKDYSKIL-----------DQIDA---RVH----GKFKEKL 167
+D A+R +Y ++ DQ+D RVH G+ +
Sbjct: 468 QQIKQHMEDLKLEAERAEREGNYQRVAEIRYGELKQLQDQMDTLRKRVHDEQGGEALVRE 527
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V ++IAEV S+ TGIP S E+ + ++ L KRV GQ++AID + A+ + +A
Sbjct: 528 EVTADDIAEVVSRWTGIPVSRMMQSEREKLLHLEDELHKRVIGQDEAIDAVCNAVRRSRA 587
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ +R + F+F G GK ELAKA+A L+ +++N + DM Y E S+
Sbjct: 588 GLQ--DPKRPIASFIFLGTTGVGKTELAKALAEYLF---NDENMMTRIDMSEYQEKFSVT 642
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD+IEKA+ + N LL++L D R
Sbjct: 643 RLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVL--DDGRLTDN 700
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDL 394
D NT+IIMTS+ EQ+ ++M R++++ F P + + K+V + L
Sbjct: 701 KGRLVDFKNTIIIMTSNATREQLTKLMRPEFLNRIDDII--TFHPLTKEEIGKVVELQL 757
>gi|313679327|ref|YP_004057066.1| ATP-dependent chaperone clpb [Oceanithermus profundus DSM 14977]
gi|313152042|gb|ADR35893.1| ATP-dependent chaperone ClpB [Oceanithermus profundus DSM 14977]
Length = 855
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + L ++ ID++ + R + +E+D+ +
Sbjct: 353 HGVRISDPAIVAAATLSH--RYISDRRLPDKAIDLIDEAAARLRMQLESQPEEIDQLERK 410
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKD-------------AFFELVSFVKLR 127
+ +E E L KE D D +R L +I+ E+ + A E+++ ++ +
Sbjct: 411 KLQLEIEREALKKETDPDSKAR---LEEIEKEIAELTEKIEAMKAEWQAEVEILNELREK 467
Query: 128 MQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDA---RVHGKFKE----KLAVDVEE 173
Q E D+ + + A+R D +K +L +++ R+ K K+ +L V E+
Sbjct: 468 -QKELDELRTQIELAQRNYDLNKAAELQYGVLPKLEEEVNRLSEKLKDAKYVRLEVTEED 526
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + E+ +R++ L KRV GQ++AI + +A+ + +A K
Sbjct: 527 IAEVVSRWTGIPVAKLLEGEREKLLRLEDELHKRVVGQDEAIQSVADAIRRARAGLK--D 584
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK ELAK +A L+D + +I DM Y E S+ +
Sbjct: 585 PNRPIGSFMFLGPTGVGKTELAKTLAETLFDTEEA---MIRIDMTEYMEKHSVARLIGAP 641
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+LL+IL D R D
Sbjct: 642 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQIL--DDGRLTDSHGRVVD 699
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTA-TYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT+IIMTS++ + + + Y R+ E V F+P L LD ++V
Sbjct: 700 FRNTVIIMTSNMGSHLILDGIKEGLPYERIQERVFAVLQEHFRPEFLNRLDDIIV 754
>gi|146297060|ref|YP_001180831.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410636|gb|ABP67640.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 864
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 202/421 (47%), Gaps = 65/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D+AL A++++ R L ++ ID++ + D ELD+
Sbjct: 363 HGVRITDDALIAAAKLSD--RYITDRFLPDKAIDLIDEAAALLRTEIDSMPTELDEITRK 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAF-------------FELVSFVKLRM 128
+ + +E L KE+ + + L +ID E+ + EL+ V+ ++
Sbjct: 421 IMQLRIEKNVLQKEENPSTKQR--LEEIDKEIAELNDRANQLSAQWEYEKELIKEVR-KI 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE-----------KLAVD 170
+ E +D + +A+R D +K+ L ++ R+ K +E K V
Sbjct: 478 KEEIEDVKIKIEEAERNYDLNKLSELKYGRLLELQKRLEQKRQEIEKIPPEKRLLKEEVT 537
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIA++ SK TGIP + ++ + + L +RV GQN+A++ + A+ + +A K
Sbjct: 538 EEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQNEAVEAVCNAIMRARAGIK 597
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 --DPRKPIGTFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLI 652
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 653 GAPPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNILLQIM--DDGRLTDSKGR 710
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLV 390
D NT+IIMTS+L E Y + + G ++E T L F+P L LD+++
Sbjct: 711 TVDFKNTIIIMTSNLGSE--YLLNANISNGEIDENTRKLIDRELKTHFRPEFLNRLDEII 768
Query: 391 V 391
+
Sbjct: 769 I 769
>gi|399117309|emb|CCG20123.1| chaperone protein ClpB [Taylorella asinigenitalis 14/45]
Length = 856
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 205/428 (47%), Gaps = 86/428 (20%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRC---LNSRDKYQKELDKH 78
H ++I D A+ A+ ++ R L ++ ID++ + R ++S+ + LD+
Sbjct: 360 HGVEITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDRLDRR 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDF--- 135
L+ +E E + +ED + S R L I++EL ++Q EYDD+
Sbjct: 418 IIQLK---IEREAVRREDDEASKRRLQL--IEDELA------------KLQREYDDYEQI 460
Query: 136 ----VSCVHDAKRVKD-------------------------YSKILD---QIDARVHGKF 163
S VH + +++ Y K+ D ++ + G+
Sbjct: 461 WKAEKSSVHGVQSIREDIDKVKAQMAEYQRQGEYEKLSELQYGKLPDLELRLKSAEKGEV 520
Query: 164 KEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
K +L V EEIAEV S+ TGIP + + + ++ RL +RV GQ++A+ ++ +
Sbjct: 521 KNQLLRTEVGTEEIAEVVSRATGIPVAKMMQGERAKLLTMEDRLHERVVGQDEAVRLVSD 580
Query: 221 ALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGN 279
A+ + +A GLS + G FLF GP GK EL KA+AN L+ D+D+H++ DM
Sbjct: 581 AIRRSRA---GLSDPSKPYGSFLFLGPTGVGKTELTKALANFLF---DSDDHMVRIDMSE 634
Query: 280 YTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKT 327
+ E ++ + L ++++PYSV+L D+IEKA+ + N+LL++L
Sbjct: 635 FMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSVILLDEIEKAHPDVFNILLQVL-- 692
Query: 328 DFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT----GSLFKPSLL 383
D R D NT+I+MTS++ + + + M Y ++ +V + F+P L
Sbjct: 693 DDGRLTDGQGRTVDFRNTVIVMTSNIGSQHIQK-MSGEPYEKIKDVVWDELKNSFRPEFL 751
Query: 384 KLLDKLVV 391
+D++VV
Sbjct: 752 NRIDEIVV 759
>gi|283786204|ref|YP_003366069.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
gi|282949658|emb|CBG89277.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
Length = 857
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 197/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALMKESDEASKKR--LDMLNEELNDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GL+
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYSHMKEMVLGVVSHNFRPEFINRIDEVVV 762
>gi|350545741|ref|ZP_08915197.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
gi|350526470|emb|CCD40355.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
Length = 865
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S + E+ ++++G+L +RV GQ++AI + A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQREREKLLQIEGKLHERVIGQDEAIGAVANAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ +V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQGMVGKPQEKVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 130/240 (54%), Gaps = 25/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAE+ S+ TGIP S ++ +R++ L KRV GQ++A+ ++ EA+ + +A
Sbjct: 539 VTPEEIAEIVSRWTGIPVSRIQEGERDKLLRLEEILHKRVVGQDEAVRLVSEAVLRARAG 598
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K RR +G FLF GP GK ELAKA+A L+D+ DN +I DM Y E S+
Sbjct: 599 IK--DPRRPIGSFLFLGPTGVGKTELAKALAEALFDSEDN---MIRIDMSEYMEKHSVSR 653
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSV+LFD++EKA+ + N LL+IL D R
Sbjct: 654 LIGAPPGYVGYDEGGQLTEQVRRKPYSVILFDEVEKAHPDVFNTLLQIL--DDGRVTDSH 711
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYE-----VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D N +II+TS++ + + A+ ++EV SLF+P + LD+++V
Sbjct: 712 GKTVDFKNCVIILTSNVGSQHLSRCTDPMAFEEASKRAIDEVK-SLFRPEFINRLDEMIV 770
>gi|219870451|ref|YP_002474826.1| ATP-dependent Clp protease subunit B [Haemophilus parasuis SH0165]
gi|219690655|gb|ACL31878.1| ATP-dependent Clp protease chain B/ATPases with chaperone activity,
ATP-binding subunit [Haemophilus parasuis SH0165]
Length = 857
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 25/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L KRV GQ++A+D + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHKRVIGQSEAVDAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDQD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E +Y V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQENAENMSYDEMKTIVMNVVGQHFRPEFINRIDETVV 762
>gi|372488803|ref|YP_005028368.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
gi|359355356|gb|AEV26527.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
Length = 861
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 204/436 (46%), Gaps = 98/436 (22%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKG---IKRCLNSRDKYQKELDKH 78
H + I D A+ A+ ++ R L ++ ID++ + IK ++S+ + +LD+
Sbjct: 361 HGVDITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRR 418
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
L+ +E E + KE + S + F L I++E+ ++Q EY D
Sbjct: 419 IIQLK---IEREAVKKEKDEASKKRFGL--IEDEIA------------KLQKEYSDLEEV 461
Query: 139 -------VHDAKRVKD-------------------------YSKILDQIDARVH------ 160
VH A VK+ Y K L Q++A++
Sbjct: 462 WKAEKAQVHGAAHVKEEIDKIKAEIARLQREGKLEKVAELQYGK-LPQLEAQLKVAEKAS 520
Query: 161 --GKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAI 215
G+ + KL V EEIAEV S+ TGIP S ++ ++++ RL +RV GQ++A+
Sbjct: 521 EGGQQQNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDRLHQRVVGQDEAV 580
Query: 216 DVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIH 274
++ +A+ + +A GLS R G FLF GP GK EL KA+A L+D+ D HLI
Sbjct: 581 RLVSDAIRRSRA---GLSDPNRPYGSFLFLGPTGVGKTELCKALAEFLFDSED---HLIR 634
Query: 275 FDMGNYTELESIKHFF------------DSLAALVKKRPYSVVLFDKIEKANSSILNLLL 322
DM + E S+ +L V+++PYSV+L D++EKA+ + N+LL
Sbjct: 635 IDMSEFMEKHSVARLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLL 694
Query: 323 KILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTG 375
++L D R D NT+I+MTS+L + + Y+++ A G V
Sbjct: 695 QVL--DDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQLIKLAVMGEVK---- 748
Query: 376 SLFKPSLLKLLDKLVV 391
S F+P + +D+ VV
Sbjct: 749 SYFRPEFINRIDEAVV 764
>gi|33866037|ref|NP_897596.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102]
gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102]
Length = 875
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 131/241 (54%), Gaps = 26/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IAEV +K TGIP + E+ ++++ L +RV GQN A+ + +A+ + +A
Sbjct: 549 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRA- 607
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R + FLF GP GK EL+KA+AN L+ D+D+ ++ DM Y E ++
Sbjct: 608 --GLSDPNRPIASFLFLGPTGVGKTELSKALANRLF---DSDDAMVRIDMSEYMEKHTVS 662
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+V+LFD++EKA+ + N++L+IL D R
Sbjct: 663 RLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL--DDGRVTDG 720
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D TNT++I+TS++ + + E+ TA RVNE + F+P L LD +
Sbjct: 721 QGRTVDFTNTVLILTSNIGSQSILELAGDPEQHTAMEQRVNEALKAKFRPEFLNRLDDQI 780
Query: 391 V 391
+
Sbjct: 781 I 781
>gi|400178625|gb|AFP72858.1| ATP-dependent chaperone ClpB, partial [uncultured bacterium]
Length = 620
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 197/417 (47%), Gaps = 57/417 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A++++ R L ++ ID++ + R D +ELD+ +
Sbjct: 115 HGVRITDPALVAAAQLSH--RYITDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELERR 172
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVK---------LRMQVE 131
+ + +E L KE + S + + Q +EL + EL K ++Q E
Sbjct: 173 IIQLNIERVALEKEKDEASRKRLGILQTQISELGRKYQELEEVWKGEKLTIEGTSQIQKE 232
Query: 132 YDDFVSCVHDAKRVKDYSKILD----------------QIDARVHGKFKE----KLAVDV 171
D + A+R D ++ + +I A G + + V
Sbjct: 233 LDRKRVELDTARRANDLERMAELQYSSIPALEAQLRHAEIHAESTGSGAKPTLLRTEVGE 292
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV ++ TGIP S +E+ ++++ RL+ RV GQ++A+ + A+ + +A G
Sbjct: 293 EEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQTRVVGQSEAVAAVSNAIRRSRA---G 349
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS RR G FLF GP GK EL+KA+A L+D+ D HLI DM + E S+
Sbjct: 350 LSDPRRPNGSFLFLGPTGVGKTELSKALAEFLFDSED---HLIRIDMSEFMEKHSVARLI 406
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 407 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 464
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L +++ E Y V +V F+P L +D+LV+
Sbjct: 465 TVDFRNTVIVMTSNLGSDRIQEFGRKGDYDGMRVAVMDVVQDHFRPEFLNRIDELVI 521
>gi|358636852|dbj|BAL24149.1| ClpB protein [Azoarcus sp. KH32C]
Length = 859
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ +R++ RL RV GQ++A+ ++ +A+ + +A
Sbjct: 533 VGTEEIAEVVSRATGIPVSKMMQGEREKLLRMEERLHSRVVGQDEAVRLVSDAIRRSRA- 591
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 592 --GLSDENRPYGSFLFLGPTGVGKTELCKALAEFLF---DSEEHLIRVDMSEFMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A V + F+P + +D+
Sbjct: 705 QGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMAEVK----TFFRPEFVNRIDE 760
Query: 389 LVV 391
+VV
Sbjct: 761 VVV 763
>gi|291533041|emb|CBL06154.1| ATP-dependent chaperone ClpB [Megamonas hypermegale ART12/1]
Length = 849
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 202/411 (49%), Gaps = 51/411 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R + L ++ ID++ + + + + ++K +
Sbjct: 347 HGVRIRDNALVSAAVLSD--RYISDRFLPDKAIDLVDEAAAKLRTEIESMPEPIEKLRRK 404
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID---------NELKDAF-FELVSFVKLR-MQV 130
+ + +E E L KE TD +S+ + ID NELK + E V++R ++
Sbjct: 405 IMQLQIEEEALNKE-TDEASKEKLAKLIDEKTKLQNEENELKAKWDKEKQGIVRVRAIKK 463
Query: 131 EYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVDVEE 173
E D + + A+R DY+K L++++ VH + +L V E+
Sbjct: 464 EMDSANTEMEKAQRSGDYAKASEIKYGKLPQLQKELEEMEKAVHDEEGNRLLKEEVSEED 523
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V S+ TGIP + T E+ + ++ L +RV GQ++A+ + EA+ + +A K
Sbjct: 524 IAQVVSRWTGIPVTKMLTGEREKLVHLEDVLHERVVGQDEAVKAVSEAIIRARAGIK--D 581
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK ELAK +A L+ D++ +I DM Y E S+ +
Sbjct: 582 PNRPIGSFIFLGPTGVGKTELAKTLAESLF---DDERSIIRIDMSEYMEKHSVARLIGAP 638
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D+IEKA+ + N+LL+IL D R +
Sbjct: 639 PGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLLQIL--DDGRLTDGKGRVVN 696
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR-VNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L ++ AT + V ++ F+P L +D ++V
Sbjct: 697 FKNTVIIMTSNLGSHEILNQEDFATAEKLVRDILKDYFRPEFLNRVDDIIV 747
>gi|269114792|ref|YP_003302555.1| Chaperone ClpB [Mycoplasma hominis ATCC 23114]
gi|268322417|emb|CAX37152.1| Chaperone ClpB [Mycoplasma hominis ATCC 23114]
Length = 716
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 143/268 (53%), Gaps = 25/268 (9%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
V + K D+++ ++ + K +L VD EE+A++ SK T IP + +++ + +
Sbjct: 366 VPELIKTRDELEQKIQSR-KNRLIKEVVDAEEVADIVSKWTNIPINRLLENQKQKILNLS 424
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANE 261
LKKRV GQ+ AI++I +A+ + KA R +G FLF GP GK ELAK++A
Sbjct: 425 ETLKKRVKGQDQAIELISDAIKRSKANIN--DPNRPIGSFLFLGPTGVGKTELAKSLAEA 482
Query: 262 LYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDK 309
L+ D++NH++ DM Y E S+ S L +++ PYS+VLFD+
Sbjct: 483 LF---DDENHIVRLDMSEYMEKHSVSKLIGSPPGYIGYDNGGQLTEKIRQNPYSIVLFDE 539
Query: 310 IEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR 369
IEKANS +LN+LL+IL +T + F NT+IIMTS++ ++ LT R
Sbjct: 540 IEKANSDVLNILLQILDNGTLTDSTGRVVNF--KNTIIIMTSNIGSSEIINKSLTIDGVR 597
Query: 370 VNEVTGSLFKPSLLKLLDKLVVIDLAVP 397
+ F+P + +D++V + P
Sbjct: 598 A--LLLRSFRPEFINRIDEIVPFNPLSP 623
>gi|416077717|ref|ZP_11586018.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348003902|gb|EGY44453.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
Length = 856
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRKR--LEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ + ++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKEKLLHMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + V EV G F+P + +D+ V+
Sbjct: 709 FRNTVVIMTSNLGSDLIQDHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVM 761
>gi|383754728|ref|YP_005433631.1| putative chaperone protein ClpB [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366780|dbj|BAL83608.1| putative chaperone protein ClpB [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 857
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 201/414 (48%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R + L ++ ID++ + + + +D+
Sbjct: 360 HGVRIRDAALVSAAVLSD--RYISDRFLPDKAIDLVDEAAAKLRTEIESMPAPIDE---- 413
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFW---------LRQIDNELKDAF-FELVSFVKLR- 127
+RR +++ E Q +K++TD +S+ L+ +N LK+ + E + +++R
Sbjct: 414 IRRKIMQIEIEEQALKKETDAASQEKLAAITAEKGSLQVEENTLKEKWEHEKQAILRVRA 473
Query: 128 MQVEYDDFVSCVHDAKRVKD--------YSKIL----------DQIDARVHGKFKEKLAV 169
++ E DD S + A+R D Y K+ ++I AR G+ K V
Sbjct: 474 IKKEIDDVNSQMESAERAYDLNRLSELKYGKLPQLQQQLKEEEERIAARAQGESLLKEEV 533
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
E+IA+V S+ TGIP S T E+ + ++ L +RV GQ++A+ + EA+ + +A
Sbjct: 534 GEEDIAKVISRWTGIPVSKMLTGEREKLIHLEDVLHERVVGQDEAVKAVSEAILRARAGI 593
Query: 230 KGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
K R +G F+F GP GK ELAK +A L+ D++ +I DM Y E S+
Sbjct: 594 K--DPNRPIGSFIFLGPTGVGKTELAKTLAEALF---DDERSMIRIDMSEYMEKHSVARL 648
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D+IEKA+ + N+LL+IL D R
Sbjct: 649 IGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLLQIL--DDGRLTDGKG 706
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ NT+IIMTS+L ++ V E+ F+P L +D ++V
Sbjct: 707 RVVNFKNTVIIMTSNLGSHEILNKDYEEAQSAVKEILKDYFRPEFLNRVDDIIV 760
>gi|260886964|ref|ZP_05898227.1| ATP-dependent chaperone protein ClpB [Selenomonas sputigena ATCC
35185]
gi|330839249|ref|YP_004413829.1| ATP-dependent chaperone ClpB [Selenomonas sputigena ATCC 35185]
gi|260863026|gb|EEX77526.1| ATP-dependent chaperone protein ClpB [Selenomonas sputigena ATCC
35185]
gi|329747013|gb|AEC00370.1| ATP-dependent chaperone ClpB [Selenomonas sputigena ATCC 35185]
Length = 857
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 19/235 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IAEV S+ TGIP S T E+ +R++ L +RV GQ++A+ V+ EA+ + +A
Sbjct: 533 VSEEDIAEVVSRWTGIPVSKMLTGEREKLLRLEDVLHERVVGQDEAVRVVSEAILRARAG 592
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELAK +A L+ D+D +I DM Y E S+
Sbjct: 593 IK--DPNRPIGSFIFLGPTGVGKTELAKTLAEALF---DDDRSMIRIDMSEYMEKHSVAR 647
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+L D+IEKA+ + N+LL+IL D R
Sbjct: 648 LIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLLQIL--DDGRLTDGK 705
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ NT+IIMTS+L ++ V E+ F+P L +D +VV
Sbjct: 706 GRVVNFKNTVIIMTSNLGSHEILNKDFEEAQTAVKELLKEYFRPEFLNRVDDIVV 760
>gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit [Chromobacterium violaceum ATCC
12472]
gi|54035800|sp|Q7NWN7.1|CLPB_CHRVO RecName: Full=Chaperone protein ClpB
gi|34103255|gb|AAQ59618.1| ATP-dependent Clp protease subunit; heat-shock protein
[Chromobacterium violaceum ATCC 12472]
Length = 859
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 200/421 (47%), Gaps = 67/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++Q R L ++ ID++ + R D + +DK
Sbjct: 361 HGVDITDPAIVAAAELSQ--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I++E+ + E ++ ++
Sbjct: 419 LIQLKIEREAVNKESDEASQKRLKL--IEDEIAELSREYADLEEIWKAEKAAQQGSQSIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH--------GKFKE----KLAVD 170
E D + + KR D+ K+ L Q++AR+ G+ K + V
Sbjct: 477 EEIDRLKVDMEELKRKGDWQKLAELQYGKLPQLEARLKEAESAGDKGEAKPNRLLRTQVG 536
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAEV S+ TGIP S T E+ ++++ L +RV GQ++A+ + +A+ + ++
Sbjct: 537 AEEIAEVVSRATGIPVSKMLTGEREKLLKMEDVLHQRVVGQDEAVSAVADAIRR---SRS 593
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ + G FLF GP GK EL K +A+ L+D+ D HLI DM Y E S+
Sbjct: 594 GLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSKD---HLIRIDMSEYMEKHSVARL 650
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 IGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGQG 708
Query: 338 AAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+I+MTS++ +Q+ Y+V+ A V + F+P + +D++V
Sbjct: 709 RTVDFKNTVIVMTSNIGSQQIQAMATDDYQVIKLAVMAEVK----TQFRPEFINRIDEVV 764
Query: 391 V 391
V
Sbjct: 765 V 765
>gi|429097512|ref|ZP_19159618.1| ClpB protein [Cronobacter dublinensis 582]
gi|426283852|emb|CCJ85731.1| ClpB protein [Cronobacter dublinensis 582]
Length = 823
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 380
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------L 126
L R +++ +Q + +++D +S+ L +++EL D + + +
Sbjct: 381 LERRIIQLGDRQQALMKESDEASKK-RLDMLNDELNDKERQYSTLEEEWKAEKASLSGTQ 439
Query: 127 RMQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 440 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 499
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A G
Sbjct: 500 AEIAEVLARWTGIPVSRMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---G 556
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 557 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 613
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 614 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 671
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V G F+P + +D++VV
Sbjct: 672 TVDFRNTVVIMTSNLGSDLIQERFGALDYASMKELVMGVVGQSFRPEFINRIDEVVV 728
>gi|213027793|ref|ZP_03342240.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 415
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP S E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 93 EIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GL 149
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 150 SDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVG 206
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 207 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 264
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 265 VDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 320
>gi|54035803|sp|Q7U637.2|CLPB1_SYNPX RecName: Full=Chaperone protein ClpB 1
Length = 862
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 131/241 (54%), Gaps = 26/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IAEV +K TGIP + E+ ++++ L +RV GQN A+ + +A+ + +A
Sbjct: 536 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRA- 594
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R + FLF GP GK EL+KA+AN L+ D+D+ ++ DM Y E ++
Sbjct: 595 --GLSDPNRPIASFLFLGPTGVGKTELSKALANRLF---DSDDAMVRIDMSEYMEKHTVS 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+V+LFD++EKA+ + N++L+IL D R
Sbjct: 650 RLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL--DDGRVTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D TNT++I+TS++ + + E+ TA RVNE + F+P L LD +
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSILELAGDPEQHTAMEQRVNEALKAKFRPEFLNRLDDQI 767
Query: 391 V 391
+
Sbjct: 768 I 768
>gi|251793445|ref|YP_003008174.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
gi|422337408|ref|ZP_16418379.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
gi|247534841|gb|ACS98087.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
gi|353345435|gb|EHB89730.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
Length = 856
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 195/417 (46%), Gaps = 63/417 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRK--RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E ++ + + A+R D SK+ + Q+ A + KE + V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPELEKQLAAAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP S +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVSKMMEGEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDL-------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L E+ Y+ M V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNQEESYDEM----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|356519114|ref|XP_003528219.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 764
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 195/409 (47%), Gaps = 67/409 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++I D AL +A++++ R L ++ ID++ + C N R D + +E+D
Sbjct: 362 HGVRILDRALVVAAQLSS--RYITGRHLPDKAIDLVDEA---CANVRVQLDSHPEEIDNL 416
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRM 128
+ + VE L KE D +R +R+ ++L+D L+ K R+
Sbjct: 417 ERKRMQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYKKEKERIDNIRRL 476
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD--------------QIDARVHGKFKEKLAVDVEEI 174
+ + ++ + +A+R D ++ D +++ G V E I
Sbjct: 477 KQKREELNFALQEAERRYDLARAADLRYGAIQEVESAIQELEGNNEGNVMLTETVGPEHI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AEV S+ TGIP + +ER + + RL +RV GQ+ A++ + EA+ + +A GL
Sbjct: 537 AEVVSRWTGIPVTRLGQNDKERLIGLADRLHQRVVGQDQAVNAVAEAVLRSRA---GLGR 593
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK EL+KA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 594 PQQPTGSFLFLGPTGVGKTELSKALAEQLF---DDENQLVRIDMSEYMEQHSVSRLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L +++RPYSVVLFD++EKA++S+ N LL++L D R D
Sbjct: 651 PGYVGHEEGGQLTEAIRRRPYSVVLFDEVEKAHTSVFNTLLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----------VNEVTGSLFKP 380
NT+IIMTS+L E +LT G+ + EVT + P
Sbjct: 709 FRNTVIIMTSNLGAEH----LLTGLSGKSSMQVARDRVMQEVTNPIQSP 753
>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
Length = 866
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 200/420 (47%), Gaps = 57/420 (13%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H ++I D AL A++++ R L ++ ID++ + R D +ELD+
Sbjct: 358 EAHHGVRITDPALVAAAQLSH--RYITDRNLPDKAIDLMDEAASRIKMEIDSKPQELDEL 415
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVK---------LRM 128
+ + + +E L KE + S + + Q +EL + EL K ++
Sbjct: 416 ERRIIQLNIERVALEKEKDEASRKRLGILQTQISELGRKYQELEEVWKGEKLAIEGTSQI 475
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLA-------- 168
Q E D + A+R D ++ + Q+ +A +H + A
Sbjct: 476 QKELDRKRVELDTARRANDLERMAELQYSSIPALEAQLRNAEIHAESAGSGAKPTLLRTE 535
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV ++ TGIP S +E+ ++++ RL+ RV GQ++A+ + A+ + +A
Sbjct: 536 VGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRA- 594
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS RR G FLF GP GK EL+KA+A L+D+ D HL+ DM + E S+
Sbjct: 595 --GLSDPRRPNGSFLFLGPTGVGKTELSKALAEFLFDSED---HLVRVDMSEFMEKHSVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L +++ E Y V +V F+P L +D+LV+
Sbjct: 708 QGRTVDFRNTVIVMTSNLGSDRIQEFGRKGDYDGMRVAVMDVVQDHFRPEFLNRIDELVI 767
>gi|365967014|ref|YP_004948576.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745927|gb|AEW76832.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 856
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRKR--LEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ + ++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKEKLLHMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + V EV G F+P + +D+ V+
Sbjct: 709 FRNTVVIMTSNLGSDLIQDHAQEGYDTVKSMVMEVVGHYFRPEFINRIDETVM 761
>gi|294650714|ref|ZP_06728066.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
ATCC 19194]
gi|292823398|gb|EFF82249.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
ATCC 19194]
Length = 859
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 196/414 (47%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS--FWLRQIDNELKDAFFELVSFVKL---------RMQV 130
L + ++ E VK+D D S++ L Q E + + +L K + QV
Sbjct: 416 LIQLKMQLEA-VKKDQDDGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQV 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLEQAEIAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVAKMLQGEREKLLHMESFLHNRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ TAT V V S F+P + +D+LV+
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGETATDDEVRAVVMSAVSQHFRPEFINRIDELVI 760
>gi|365839294|ref|ZP_09380539.1| ATP-dependent chaperone protein ClpB [Anaeroglobus geminatus F0357]
gi|364565322|gb|EHM43054.1| ATP-dependent chaperone protein ClpB [Anaeroglobus geminatus F0357]
Length = 875
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 211/443 (47%), Gaps = 59/443 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D A+ A+ ++ R + L ++ ID++ + + + LD+ ++
Sbjct: 376 HGVRIRDNAMVAAAVLSD--RYISDRFLPDKAIDLVDEAAAKLRTEIESMPAPLDEIRHK 433
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDN--ELKDAFFELVSF------VKLRMQV--- 130
+ + +E + L KE TD +S+ + +DN EL+ EL + LR Q
Sbjct: 434 IMQLEIEEQSLNKE-TDEASKERLAKIVDNKKELQAEEKELQARWDKEKQAILRTQALKR 492
Query: 131 EYDDFVSCVHDAKRVKDYSK-----------ILDQIDARVHGKFKE------KLAVDVEE 173
E DD + A+R D +K + Q+ + KE K V E+
Sbjct: 493 ELDDVRHQMEKAEREYDLTKASELKYGKLPELQHQLAEQEESLSKESDSHLLKEEVGEED 552
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V S+ TGIP + T E+ + + L KRV GQ++A+ V+ +A+ + +A K
Sbjct: 553 IAQVVSRWTGIPVTKMMTGEREKLLHLDDTLHKRVVGQDEAVQVVSDAIIRARAGIK--D 610
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK ELAKA+A L+D+ N ++ DM Y E ++ +
Sbjct: 611 PNRPIGSFIFLGPTGVGKTELAKALAESLFDDERN---IVRIDMSEYMEKHTVSRLIGAP 667
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++ PYSV+L D+IEKA+ I N+LL+IL D R +
Sbjct: 668 PGYVGYDEGGQLTEAVRRHPYSVILLDEIEKAHPDIFNVLLQIL--DDGRLTDGKGRVVN 725
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVVID--LA 395
NT+IIMTS+L +E++ T + +V ++ + F+P L +D +VV
Sbjct: 726 FKNTVIIMTSNLGS---HEILETGNFEDAEKQVKDILKNYFRPEFLNRIDDIVVFKGLKR 782
Query: 396 VPLLDTTRLLLREWACEETKRRN 418
+LD R+LLR + K+ N
Sbjct: 783 EQVLDIARILLRNLSNRLQKQMN 805
>gi|310827092|ref|YP_003959449.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738826|gb|ADO36486.1| hypothetical protein ELI_1500 [Eubacterium limosum KIST612]
Length = 867
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 220/486 (45%), Gaps = 66/486 (13%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H ++IQD AL A+ ++ R L ++ ID++ + D +E+D+
Sbjct: 363 EIFHGVKIQDNALVSAAVLSN--RYITDRFLPDKAIDLVDEACAMIRTEIDSMPEEMDEV 420
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFEL----------VSFVK 125
+ + +E L KE+ S L +I EL +D F E+ V V+
Sbjct: 421 NRKMIQLEIEETALKKEEDKLSKER--LERIQKELAEYRDRFNEMKIQWDNEKNAVESVQ 478
Query: 126 LRMQVEYDDFVSCVHDAKRVKDYSK------------------ILDQIDARVHGKFKEKL 167
+++ E D + A+R DY K + + +AR G+ +
Sbjct: 479 -KIKEEIDRVNHQIELAQRESDYDKAAELTYGRLPELQKKMKEMEEAAEARGEGESLIRE 537
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V +EIAEV S TGIP S E+ + ++ L+KRV GQ + I+ + +A+ + +A
Sbjct: 538 SVTEDEIAEVISNWTGIPLSRLMAGEREKLLNLEDTLRKRVVGQEEPIEKVVDAIIRSRA 597
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K +S +G FLF GP GK ELAKA+A L+D+ DN +I DM Y E S+
Sbjct: 598 GIKNPNS--PIGSFLFLGPTGVGKTELAKAVAANLFDSEDN---MIRIDMSEYMEKFSVS 652
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL+IL D R
Sbjct: 653 RLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHKDVFNVLLQIL--DDGRVTDS 710
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEV------MLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS++ E + E +L T V + F+P L +D++
Sbjct: 711 QGRTIDFKNTIIIMTSNIGSEYLLEGIDAEGNILVETEEAVMNSLKNYFRPEFLNRIDEI 770
Query: 390 VVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARKYGQNGE 449
V L PL + + + E ++R +D + V+ + I YG
Sbjct: 771 V---LYKPLTKRSIGRIVDLMMAELQKRLDDKRIVVKLSEDAKEAVIDQGYDPSYG--AR 825
Query: 450 GLKRWM 455
LKR++
Sbjct: 826 PLKRFL 831
>gi|325577681|ref|ZP_08147956.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
gi|325160426|gb|EGC72552.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
Length = 856
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 197/414 (47%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELSDKEREYAELEEVWKSEKAALSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E D + + A+R D SK+ + Q+ A G+ KE + V EEI
Sbjct: 477 QELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLAAAETGEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + +YG V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSD-LIQGSKNESYGEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|302772230|ref|XP_002969533.1| hypothetical protein SELMODRAFT_170696 [Selaginella moellendorffii]
gi|300163009|gb|EFJ29621.1| hypothetical protein SELMODRAFT_170696 [Selaginella moellendorffii]
Length = 900
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 234/488 (47%), Gaps = 75/488 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++I D AL +A++++ R A L ++ ID++ + C N R D +E+DK
Sbjct: 357 HGVRIMDRALVVAAQLSS--RYIAGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDKL 411
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE------- 131
+ + +E L KE D +S+ L ++ EL D E + +K+R Q E
Sbjct: 412 ERQRIQLEIEMHALEKE-KDKASKD-RLVEVHQEL-DNLKEKLQPLKMRYQKEKERVDQL 468
Query: 132 ------YDDFVSCVHDAKRVKDYSKILD-------QIDARVHGKFKE-------KLAVDV 171
++ + +A+R D ++ D +IDA + KE AV
Sbjct: 469 RRLKKKREELQISLQEAERRMDLARAADIRYGGLQEIDAAIARIEKEAEENNMLTEAVGP 528
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E+IAEV S+ TG+P +ER + + RL +RV GQ++A++ + EA+ + +A G
Sbjct: 529 EQIAEVVSRWTGVPVKRLGQDDKERLVGLGKRLHERVVGQDEAVEAVAEAVLRSRA---G 585
Query: 232 LSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L RQ G F+F GP GK ELAKA+A +L+ D++N LI DM Y E ++
Sbjct: 586 LGRPRQPTGSFMFLGPTGVGKTELAKALAEQLF---DDENQLIRLDMSEYMEQHAVARLI 642
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+LFD++EKA+SSI N LL++L D R
Sbjct: 643 GAPPGYVGYEEGGQLTEAVRRRPYSVILFDEVEKAHSSIFNTLLQLL--DDGRLTDGQGR 700
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL-----FKPSLLKLLDKLVVID 393
+ +IIMTS+L E + M+ T + + + F+P LL LD +VV
Sbjct: 701 TVNFAECVIIMTSNLGAEHLLSGMIGQTTMKAAKEKVMMEVRRHFRPELLNRLDDIVVFH 760
Query: 394 LAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQNGEG 450
L R+ ++E A +R V + S +AL H+ S A YG
Sbjct: 761 PLSHEQLRKVARIQMKEVAMRLAQR------GVALGVSDAALDHVLSEAYDPVYG--ARP 812
Query: 451 LKRWMDQR 458
++RW++++
Sbjct: 813 IRRWLEKK 820
>gi|226953127|ref|ZP_03823591.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
gi|226836125|gb|EEH68508.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
Length = 859
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 200/414 (48%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKDAFFELVSFVK--LRMQV 130
L + ++ E VK+D D S++ +QI N+L++ + + V+ + QV
Sbjct: 416 LIQLKMQLEA-VKKDQDDGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQV 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLEQAEIAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVAKMLQGEREKLLHMESFLHNRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ TAT V V S F+P + +D+LV+
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGETATDDEVRAVVMSAVSQHFRPEFINRIDELVI 760
>gi|424790554|ref|ZP_18217088.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797974|gb|EKU26148.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 861
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 197/420 (46%), Gaps = 65/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKE--------------DTDHSSRSFWLRQIDNELKDAFFELVSFVKLR 127
L + ++ E L KE D D R F +D + L +++
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLQREFS--DLDEVWRSEKATLQGATRIK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDV 171
Q+E + A+R +DY+K + +I + +++LA V
Sbjct: 477 EQIEQARV--ELEAAQRRQDYAK-MSEIQYGLLPNLEKQLAAAGDAEHHDFKLVQDRVTA 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV S+ TGIP + ++ +R++ L +RV GQ +AI V+ +A+ + +A G
Sbjct: 534 EEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHRRVVGQQEAIKVVSDAVRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+A L+D+++ +I DM + E S+
Sbjct: 591 LSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEA---MIRIDMSEFMEKHSVARLI 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 706 TVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|345428733|ref|YP_004821849.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
gi|301154792|emb|CBW14255.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
Length = 856
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 197/414 (47%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELADKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E D + + A+R D SK+ + Q+ A G+ KE + V EEI
Sbjct: 477 QELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLAAAETGEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + +YG V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSD-LIQGSKNESYGEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|401764807|ref|YP_006579814.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400176341|gb|AFP71190.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 857
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 202/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDV 171
++ E + + A+RV D Y KI + +I + GK L V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + ++ +R++ L +RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVMGVVSHSFRPEFINRIDEVVV 762
>gi|254427099|ref|ZP_05040806.1| ATPase, AAA family [Alcanivorax sp. DG881]
gi|196193268|gb|EDX88227.1| ATPase, AAA family [Alcanivorax sp. DG881]
Length = 863
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 198/424 (46%), Gaps = 68/424 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+R++ R +L ++ ID++ + R D +E+D+
Sbjct: 359 HGVDITDGAIIAAARLSH--RYITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-LRQIDNELKDAFFELVSF-----VKLRMQVEYDDF 135
L + +E E L KE+ D S + L + +EL+ + +L L+ EY
Sbjct: 417 LIQLKMEREALRKEEDDASRKRLEKLEEEIDELEKQYADLEEIWQAEKAALQGAAEYKAE 476
Query: 136 VSC----VHDAKRVKDYS---------------KILDQIDARVHGKFKEKL---AVDVEE 173
+ + A+R D S K+ D D + + +L V EE
Sbjct: 477 LEQARVEMEQARRAGDLSRMSELQYGQIPELEKKVQDAQDREEQAQAETQLLRNKVTDEE 536
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV +K TGIP S +++ +R++ L RV GQ++A++ + A+ + +A GLS
Sbjct: 537 IAEVVAKWTGIPVSKMLEGEKDKLLRMEEALHDRVVGQDEAVEAVANAVRRSRA---GLS 593
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+AN L+ D + ++ DM + E S+ +
Sbjct: 594 DPNRPNGSFLFLGPTGVGKTELCKALANFLF---DTEEAMVRIDMSEFMEKHSVARLVGA 650
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 651 PPGYVGYEEGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQV-------------YEVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+++MTS+L + + YE M +A V EV GS F+P + +D
Sbjct: 709 DFRNTVVVMTSNLGSDLIQKLAGADAQSGSDYEAMKSA----VMEVVGSHFRPEFINRVD 764
Query: 388 KLVV 391
+ VV
Sbjct: 765 ETVV 768
>gi|433677810|ref|ZP_20509745.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430817074|emb|CCP40175.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 861
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 197/420 (46%), Gaps = 65/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKE--------------DTDHSSRSFWLRQIDNELKDAFFELVSFVKLR 127
L + ++ E L KE D D R F +D + L +++
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLQREFS--DLDEVWRSEKATLQGATRIK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDV 171
Q+E + A+R +DY+K + +I + +++LA V
Sbjct: 477 EQIEQARV--ELEAAQRRQDYAK-MSEIQYGLLPNLEKQLAAAGDAEHHDFTLVQDRVTA 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV S+ TGIP + ++ +R++ L +RV GQ +AI V+ +A+ + +A G
Sbjct: 534 EEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHRRVVGQQEAIKVVSDAVRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+A L+D+++ +I DM + E S+
Sbjct: 591 LSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEA---MIRIDMSEFMEKHSVARLI 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 706 TVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|261867258|ref|YP_003255180.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415767634|ref|ZP_11483306.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|261412590|gb|ACX81961.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348658570|gb|EGY76138.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
D17P-2]
Length = 856
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D S + L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEDDDASRKR--LEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKEKLA-----VDVEEI 174
E ++ + + A+R D SK+ L++ A+ G ++++ V EEI
Sbjct: 477 AELENARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +E+ + ++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKEKLLHMEEFLHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLFDSED---AMMRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + V EV G F+P + +D+ V+
Sbjct: 709 FRNTVVIMTSNLGSDLIQDHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVM 761
>gi|395234382|ref|ZP_10412606.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
gi|394730828|gb|EJF30655.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
Length = 857
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 203/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL+D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASQK-RLSMLNEELEDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + ++ +R++ L +RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGERDKLLRMEKELHQRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQSFRPEFINRIDEVVV 762
>gi|383817288|ref|ZP_09972664.1| protein disaggregation chaperone [Serratia sp. M24T3]
gi|383293843|gb|EIC82201.1| protein disaggregation chaperone [Serratia sp. M24T3]
Length = 857
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 197/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE D S + + +D E K L ++
Sbjct: 419 IIQLKLEQQALKKESDDASIKRLEMLNTELEQKEREYSGLDEEWKAEKASLTGTQNIKAD 478
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL---AVDVEE 173
+E + A+RV D Y KI + Q+ A + GK + L DVE
Sbjct: 479 LEQAKI--TLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAEGKTMKLLRNRVTDVE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V ++ TGIP + E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 536 IADVLARWTGIPVARMLESEREKLLRMEDDLHKRVIGQNEAVDAVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL KA+A L+ ++D+ ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFLFLGPTGVGKTELCKALATFLF---NSDDAMVRIDMSEFMEKHSVSRLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + + ATY + V EV + F+P + +D++VV
Sbjct: 708 DFRNTVVIMTSNLGSDVIQQHFGEATYAQMKESVMEVVTNNFRPEFINRIDEVVV 762
>gi|224825048|ref|ZP_03698154.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
gi|224602719|gb|EEG08896.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
Length = 858
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 195/420 (46%), Gaps = 66/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +E+DK
Sbjct: 361 HGVDITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEEMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I++E+ E ++ ++
Sbjct: 419 LIQLKIEREAVKKESDEASQKRLGL--IEDEIDRLSREYADLEEIWKAEKATAQGSQSIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-----GKFKEK------LAVDV 171
E D + D KR D+ K+ L Q++AR+ G +K V
Sbjct: 477 EEIDRLKVEMEDLKRQGDWQKLAELQYGKLPQLEARLKEAEAAGAGTQKPNRLLRTQVGA 536
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV S++TGIP S E+ +R++ L +R+ GQ++A+ + +A+ + ++ G
Sbjct: 537 EEIAEVVSRMTGIPVSKMLAGEREKLLRMEEVLHERLVGQDEAVRAVSDAIRR---SRSG 593
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL K +A L+D+ D HLI DM Y E S+
Sbjct: 594 LSDPNRPYGSFLFLGPTGVGKTELCKTLAGFLFDSED---HLIRIDMSEYMEKHSVARLI 650
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 GAPPGYVGYEEGGQLTEQVRRKPYSVILLDEVEKAHPEVFNILLQVL--DDGRLTDGQGR 708
Query: 339 AFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+++MTS++ + + Y+V+ A V F+P + +D++VV
Sbjct: 709 TVDFKNTVVVMTSNIGSQHIQAMGSDDYQVIKLAVMAEVK----GYFRPEFINRIDEVVV 764
>gi|323489935|ref|ZP_08095157.1| chaperone clpB [Planococcus donghaensis MPA1U2]
gi|323396442|gb|EGA89266.1| chaperone clpB [Planococcus donghaensis MPA1U2]
Length = 717
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 195/412 (47%), Gaps = 53/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ A R L ++ ID++ + D +ELD+
Sbjct: 214 HAVRIHDRAIVAAA--AMSDRYITERFLPDKAIDLIDEACAMIRTEIDSMPQELDEVTRR 271
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW--------LRQIDNELKDAFFELVSFVK-------- 125
L + +E + L+KE + S LR+ ++K+ + E +K
Sbjct: 272 LLQLEIEEQALMKEKDEASKIRLETLQKEIKELRESSADMKNQWTEEKESLKKIQQKREQ 331
Query: 126 ---LRMQVE-----YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
R Q+E YD + V ++ K L ++A + + E+L V EEI
Sbjct: 332 LDQFRRQLEDAENKYDLNAAAVLQHGKIPALEKELIALEASLENEGAERLLREEVTEEEI 391
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
A + ++ TGIP + E+ +R+ LK+RV GQ+ A++++ EA+ + +A K
Sbjct: 392 AGIVARWTGIPVTKLVEGEREKLLRLGETLKERVIGQDKAVELVTEAVWRARAGIK--DE 449
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R+ +G F+F GP GK ELAK++A L+D+ D H I DM Y E S+ +
Sbjct: 450 RKPIGSFIFLGPTGVGKTELAKSLAANLFDSED---HFIRIDMSEYMEKHSVSRLVGAPP 506
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++ PYSVVL D+IEKA+ + N+LL+IL D R +
Sbjct: 507 GYIGYEEGGQLTEAVRRNPYSVVLLDEIEKAHPDVANILLQIL--DDGRITDSQGRLINF 564
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
+NT++IMTS++ + E ++ + + V G L FKP LL +D +V+
Sbjct: 565 SNTVVIMTSNIGSAHINET--SSEHDVEDIVMGELRKHFKPELLNRIDDIVI 614
>gi|302879019|ref|YP_003847583.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
gi|302581808|gb|ADL55819.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
Length = 861
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 131/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S T ++ ++++ +L +RV GQ++A+ ++ +A+ + +
Sbjct: 535 VGAEEIAEVVSRATGIPVSKMMTGERDKLLKMEDKLHERVVGQDEAVRLVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R G FLF GP GK EL KA+A ++D+ D HLI DM Y E S+
Sbjct: 592 RSGLSDPNRPYGSFLFLGPTGVGKTELCKALAGFMFDSED---HLIRIDMSEYMEKHSVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL+ L D R
Sbjct: 649 RLIGAPPGYVGYEEGGGLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQAL--DDGRMTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A G V + F+P + +D+
Sbjct: 707 QGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMGEVK----TYFRPEFINRIDE 762
Query: 389 LVV 391
+VV
Sbjct: 763 VVV 765
>gi|380513637|ref|ZP_09857044.1| ATP-dependent clp protease subunit protein [Xanthomonas sacchari
NCPPB 4393]
Length = 861
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 195/418 (46%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW------------LRQIDNELKDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + +D K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIAKLEREFSDLDEVWKSEKAALQGATKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY+K + +I + +++LA V EE
Sbjct: 479 IEQARV--ELEAAQRRQDYAK-MSEIQYGLLPNLEKQLAAANEAEQHDFKLVQDRVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP + ++ +R++ L +RV GQ +AI V+ +A+ + +A GLS
Sbjct: 536 IAEVVSRWTGIPVNKMLEGERDKLLRMEDELHQRVVGQEEAIKVVSDAVRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D++D +I DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSD---AMIRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|66802530|ref|XP_635137.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60463456|gb|EAL61641.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 886
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 202/426 (47%), Gaps = 66/426 (15%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H ++I D AL +A++++ R L ++ ID++ + C N+R + + +
Sbjct: 358 ETHHGVRITDNALVVAAQLSH--RYITNRFLPDKAIDLVDEA---CANTRVQLNSQPEAI 412
Query: 79 KYFLRRAV---VEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFEL-VSFVKLRMQVE-- 131
RR + VE L KE+ D S + Q + N++KD L + K R +V+
Sbjct: 413 DNLERRRLQLEVESAALEKEEDDASKQRLKAVQEELNQIKDELQPLEAKYQKERSRVDKI 472
Query: 132 ------YDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKLAVDV 171
+D + DA+R + D K ++ D K+ + +V
Sbjct: 473 RELRKKLEDIKVKLSDAERRYDTSAAADYRYFVIPDLEKQIEVCDKERKENKKDAMVSEV 532
Query: 172 ---EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
E+IA+V S+ TGIP S ++R + + L RV GQ++A+D + +A+ + +
Sbjct: 533 VTPEQIADVVSRWTGIPVSKLSQTEKQRLLSLADHLHNRVVGQDEAVDAVADAVLR---S 589
Query: 229 KKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K GL+ Q LG FLF GP GK ELAKA+A EL+ D+++H++ DM Y E S+
Sbjct: 590 KSGLARENQPLGSFLFLGPTGVGKTELAKALALELF---DDESHMVRIDMSEYMEQHSVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYDQGGQLTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVL--DEGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY----------EVMLTATYGRVNEVTGSLFKPSLLKL 385
D +N +IIMTS+L + + + A +V + F+P L
Sbjct: 705 QGRTVDFSNVVIIMTSNLGSQYILGEQANKEGGNNSLSQACKDKVIDEVRKHFRPEFLNR 764
Query: 386 LDKLVV 391
LD ++V
Sbjct: 765 LDDIIV 770
>gi|441504482|ref|ZP_20986476.1| ClpB protein [Photobacterium sp. AK15]
gi|441427949|gb|ELR65417.1| ClpB protein [Photobacterium sp. AK15]
Length = 857
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 195/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + LVKE D S + L+ + EL E ++ ++
Sbjct: 419 IIQLKIEQQALVKESDDASHK--RLKDLSEELDKKEREYAELEEVWNAEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + + A+R D Y KI + Q+D + +E K V EI
Sbjct: 477 TELEQARTDMEIARRAGDLNRMSELQYGKIPELEKQLDLAAQAEMQEMSLLKNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + E+ + ++ L KRV GQ++A+D + A+ + +A GLS
Sbjct: 537 AEVLSRQTGIPVAKMLEGEREKLLHMEEALHKRVIGQDEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K++AN ++D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDA---MVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
N++IIMTS+L +++ E Y V EV G F+P + +D+ VV
Sbjct: 709 FRNSVIIMTSNLGSDRIQEHFGELDYDGIKHTVMEVVGQHFRPEFINRVDETVV 762
>gi|448821400|ref|YP_007414562.1| Chaperone protein ClpB [Lactobacillus plantarum ZJ316]
gi|448274897|gb|AGE39416.1| Chaperone protein ClpB [Lactobacillus plantarum ZJ316]
Length = 867
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-----EVMLTA-TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L E + + L+A T+ +V ++ S FKP L +D +
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|380032689|ref|YP_004889680.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum WCFS1]
gi|54035837|sp|Q88VX7.1|CLPB_LACPL RecName: Full=Chaperone protein ClpB
gi|342241932|emb|CCC79166.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum WCFS1]
Length = 867
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-----EVMLTA-TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L E + + L+A T+ +V ++ S FKP L +D +
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|308180709|ref|YP_003924837.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046200|gb|ADN98743.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 867
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-----EVMLTA-TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L E + + L+A T+ +V ++ S FKP L +D +
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|254556766|ref|YP_003063183.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum JDM1]
gi|254045693|gb|ACT62486.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum JDM1]
Length = 867
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-----EVMLTA-TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L E + + L+A T+ +V ++ S FKP L +D +
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|167562511|ref|ZP_02355427.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis EO147]
Length = 865
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 127/243 (52%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+ D + HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DTEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + E + A +G V + F+P L +D
Sbjct: 709 QGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQEEIKDAVWGEVKQ----HFRPEFLNRIDD 764
Query: 389 LVV 391
+VV
Sbjct: 765 VVV 767
>gi|418275449|ref|ZP_12890772.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum subsp. plantarum NC8]
gi|376009000|gb|EHS82329.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 867
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-----EVMLTA-TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L E + + L+A T+ +V ++ S FKP L +D +
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|167569691|ref|ZP_02362565.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis C6786]
Length = 865
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 127/243 (52%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+ D + HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DTEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + E + A +G V + F+P L +D
Sbjct: 709 QGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQEEIKDAVWGEVKQ----HFRPEFLNRIDD 764
Query: 389 LVV 391
+VV
Sbjct: 765 VVV 767
>gi|431751971|ref|ZP_19540657.1| chaperone ClpB [Enterococcus faecium E2620]
gi|430614580|gb|ELB51560.1| chaperone ClpB [Enterococcus faecium E2620]
Length = 869
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 155/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+S + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHSDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|401677935|ref|ZP_10809906.1| protein disaggregation chaperone [Enterobacter sp. SST3]
gi|400214706|gb|EJO45621.1| protein disaggregation chaperone [Enterobacter sp. SST3]
Length = 857
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 200/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDV 171
++ E + + A+RV D Y KI + +I + GK L V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMENDLHNRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSHNFRPEFINRIDEVVV 762
>gi|300768067|ref|ZP_07077972.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494131|gb|EFK29294.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 882
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 547 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 606
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 607 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 661
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 662 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 719
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-----EVMLTA-TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS+L E + + L+A T+ +V ++ S FKP L +D +
Sbjct: 720 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDI 779
Query: 390 VV 391
++
Sbjct: 780 IM 781
>gi|302810123|ref|XP_002986753.1| hypothetical protein SELMODRAFT_124842 [Selaginella moellendorffii]
gi|300145407|gb|EFJ12083.1| hypothetical protein SELMODRAFT_124842 [Selaginella moellendorffii]
Length = 900
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 234/488 (47%), Gaps = 75/488 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++I D AL +A++++ R A L ++ ID++ + C N R D +E+DK
Sbjct: 357 HGVRIMDRALVVAAQLSS--RYIAGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDKL 411
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE------- 131
+ + +E L KE D +S+ L ++ EL D E + +K+R Q E
Sbjct: 412 ERQRIQLEIEMHALEKE-KDKASKD-RLVEVHQEL-DNLKEKLQPLKMRYQKEKERVDQL 468
Query: 132 ------YDDFVSCVHDAKRVKDYSKILD-------QIDARVHGKFKE-------KLAVDV 171
++ + +A+R D ++ D +IDA + KE AV
Sbjct: 469 RRLKKKREELQISLQEAERRMDLARAADIRYGGLQEIDAAIARIEKEAEENNMLTEAVGP 528
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E+IAEV S+ TG+P +ER + + RL +RV GQ++A++ + EA+ + +A G
Sbjct: 529 EQIAEVVSRWTGVPVKRLGQDDKERLVGLGKRLHERVVGQDEAVEAVAEAVLRSRA---G 585
Query: 232 LSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L RQ G F+F GP GK ELAKA+A +L+ D++N LI DM Y E ++
Sbjct: 586 LGRPRQPTGSFMFLGPTGVGKTELAKALAEQLF---DDENQLIRLDMSEYMEQHAVARLI 642
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+LFD++EKA+SSI N LL++L D R
Sbjct: 643 GAPPGYVGYEEGGQLTEAVRRRPYSVILFDEVEKAHSSIFNTLLQLL--DDGRLTDGQGR 700
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL-----FKPSLLKLLDKLVVID 393
+ +IIMTS+L E + M+ T + + + F+P LL LD +V+
Sbjct: 701 TVNFAECVIIMTSNLGAEHLLSGMIGQTTMKAAKEKVMMEVRRHFRPELLNRLDDIVIFH 760
Query: 394 LAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQNGEG 450
L R+ ++E A +R V + S +AL H+ S A YG
Sbjct: 761 PLSHDQLRKVARIQMKEVAMRLAQR------GVALGVSDAALDHVLSEAYDPVYG--ARP 812
Query: 451 LKRWMDQR 458
++RW++++
Sbjct: 813 IRRWLEKK 820
>gi|358448455|ref|ZP_09158958.1| ATPase [Marinobacter manganoxydans MnI7-9]
gi|357227243|gb|EHJ05705.1| ATPase [Marinobacter manganoxydans MnI7-9]
Length = 858
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 202/422 (47%), Gaps = 72/422 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +++ D A+ A++++ R A +L ++ ID++ + + D + LD+ +
Sbjct: 361 HGVEVTDGAIIAAAKLSH--RYIADRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR------SFWLRQIDNELKD---------AFFELVSFVKL 126
L + +E E L KE TD +S+ S + ++ E D A +K
Sbjct: 419 LIQLKIEREALKKE-TDAASKKRLSELSDVITGVEREYADLEEVWNTEKAALHGSQKIKS 477
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDV 171
R++ D +A+R D K+ + Q+D + E + V
Sbjct: 478 RLEQARIDL----ENARRAGDLGKMSELQYGQIPELERQLDMASQAEMMEMKLLRNRVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAE+ SK TGIP S ++ MR++ L RV GQ++A++ + A+ + +A G
Sbjct: 534 EEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+A+ L+ D + ++ DM + E S+
Sbjct: 591 LSDPNRPNGSFLFLGPTGVGKTELCKALASFLF---DTEEAMVRIDMSEFMEKHSVARLI 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L+ + + T G
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLE---DGRLTDGQG 704
Query: 339 -AFDLTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+I+MTS+L E+ YEVM A V EV G+ F+P + +D++
Sbjct: 705 RTVDFRNTVIVMTSNLGSDIIQQKAGEESYEVMKNA----VMEVVGTHFRPEFINRVDEV 760
Query: 390 VV 391
VV
Sbjct: 761 VV 762
>gi|389865263|ref|YP_006367504.1| genetic competence negative regulator ClpC/MecB [Modestobacter
marinus]
gi|388487467|emb|CCH89025.1| Negative regulator of genetic competence ClpC/MecB [Modestobacter
marinus]
Length = 851
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 164/341 (48%), Gaps = 50/341 (14%)
Query: 126 LRMQVEYDDFVSCVH--DAKRVKDYSKI----LDQIDARVHGKFKEKLAVDVEEIAEVAS 179
L +Q E D V+ H A ++D L+Q + G E V V EIAEV S
Sbjct: 454 LELQREKDQAVAAEHYERASTLRDQIGTAQADLEQARSGGEGGIPE---VGVPEIAEVVS 510
Query: 180 KLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR-RQL 238
+ TGIP + + +R +R++ L +RV GQ++A++V+ EA+ + +A GL R +
Sbjct: 511 RATGIPVAQLTQEERDRLLRLEDVLHERVVGQDEAVEVVAEAIRRSRA---GLGDPDRPI 567
Query: 239 GLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------ 292
G FLF GP GK ELA+A+A L+ ++D ++ DM + E ++ S
Sbjct: 568 GSFLFLGPTGVGKTELARALAEALFGDSD---RMVRLDMSEFQERHTVSRLVGSPPGYVG 624
Query: 293 ------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTL 346
L V++RPYSVVL D+IEKA+ + N LL++L D R D +NT+
Sbjct: 625 YEDAGQLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQLL--DAGRLTDSQGRTVDFSNTV 682
Query: 347 IIMTSDLKDEQVYEVMLTATYGRVNEVTG------------SLFKPSLLKLLDKLVVIDL 394
+IMTS+L E + N +G F+P L +D++VV
Sbjct: 683 VIMTSNLGSEAIVNAGRGPLGFTANGNSGDDLRDQVMRRLRDAFRPEFLNRIDEIVVFRQ 742
Query: 395 --AVPLLDTTRLLLREWACEETKRR-NNDSKAVIVCPSTSA 432
A L T LLL +ET+RR + AV V P+ A
Sbjct: 743 LEAEQLARITDLLL-----DETRRRLSAQDIAVEVTPAAVA 778
>gi|291086328|ref|ZP_06355437.2| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
gi|291068913|gb|EFE07022.1| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
Length = 861
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 423 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYSHMKDMVLGVVSHNFRPEFINRIDEVVV 766
>gi|213965100|ref|ZP_03393298.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46]
gi|213952214|gb|EEB63598.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46]
Length = 859
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 194/416 (46%), Gaps = 66/416 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D +
Sbjct: 362 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPEEIDSAERI 419
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE---YDDFVSC 138
+RR +E L KE TD +S+ L ++ EL D E ++ +K R Q E DD S
Sbjct: 420 VRRLEIEEMALEKE-TDIASKE-RLDKLREELADER-EKLNALKTRWQNEKSSIDDVRSV 476
Query: 139 VHD----------AKRVKDYSKILD-------------------QIDARVHGKFKEKLAV 169
+ A+R DY ++ + DA + KE+ V
Sbjct: 477 REELDALRTESEKAEREGDYGRVAELRYGRIPELEKKLEAAEESVADAEENSMLKEE--V 534
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
+E+AEV S TGIPA E+ + ++ L +RV GQN A++ + +A+ + +A
Sbjct: 535 TPQEVAEVVSAWTGIPAGKMMQGETEKLLEMELNLGRRVVGQNAAVEAVSDAVRRSRAGV 594
Query: 230 KGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
R G FLF GP GK ELAKA+A L+ D++ ++ DM Y E S+
Sbjct: 595 A--DPNRPTGSFLFLGPTGVGKTELAKALAEFLF---DDERAMVRIDMSEYGEKHSVARL 649
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPY+VVLFD++EKA+ + ++LL++L D R
Sbjct: 650 IGAPPGYVGYDAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVL--DEGRLTDGQG 707
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT++I+TS+L +E ++ A FKP + LD +V+ D
Sbjct: 708 RTVDFRNTILILTSNLGAGGTHEQIMDAVK--------MAFKPEFINRLDDVVIFD 755
>gi|224369602|ref|YP_002603766.1| chaperone ClpB [Desulfobacterium autotrophicum HRM2]
gi|223692319|gb|ACN15602.1| ClpB [Desulfobacterium autotrophicum HRM2]
Length = 859
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 203/418 (48%), Gaps = 59/418 (14%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H ++I+D AL A+ +++ R L ++ ID++ + R D +D+
Sbjct: 357 EVYHGIRIKDSALVAAATLSK--RYITDRFLPDKAIDLIDECASRLRIEIDTMPVAIDE- 413
Query: 79 KYFLRRAVVEYE---QLVKEDTDHSSRSFW------LRQIDNELKDAFFELVSFVKL--- 126
L+R +V+ E Q +K++TD SS+S L +I+ E++ + +L
Sbjct: 414 ---LQRRMVQIEIERQGLKKETDPSSKSRKEKLDRDLAEINEEIRPMRLHWENEKRLIQE 470
Query: 127 --RMQVEYDDFVSCVHDAKRVKDYSKI--------------LDQ--IDARVHGKFKEKLA 168
+++ E D+ V+ A+R D +++ LD+ D R+ + L
Sbjct: 471 IGKIREEIDNAVTLAKRAEREGDLARVAKIRYSTLAEFQTQLDKKKADLRLLQAERRMLK 530
Query: 169 VDVEE--IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
DVEE IAEV S T IP + E+ + ++ L++RV GQ DAI + +A+ +
Sbjct: 531 EDVEESDIAEVVSSWTHIPVATMLKGEREKLIHMEEALEQRVIGQKDAIKAVSDAVRR-- 588
Query: 227 AAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
A+ GL + R +G F+F GP GK EL KA+A +++ N ++ DM Y E S
Sbjct: 589 -ARSGLKPQDRPIGTFIFMGPTGVGKTELTKAVAEFIFNTK---NAMVRIDMSEYMEKHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L V+++PYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 645 VARLIGAPPGYVGYEEGGYLTEAVRRQPYSVVLFDEIEKAHPDVFNVLLQVL--DDGRMT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D TNT++IMTS++ + E ++N+ FKP L +D+++V
Sbjct: 703 DGHGRTVDFTNTILIMTSNVGSRMIQESGGKDIQDKINQALSQTFKPEFLNRIDEIIV 760
>gi|346725988|ref|YP_004852657.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650735|gb|AEO43359.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 861
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 199/417 (47%), Gaps = 59/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + ++ E L KE + S + + D NE+ K L K++ Q
Sbjct: 419 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVDVEEI 174
+E+ + A+R +DY+K +L Q++ ++ H FK + V E I
Sbjct: 479 IEHAKL--ELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEGI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ +R++ L RV GQN+AI V+ +A+ + +A GLS
Sbjct: 537 AEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D+ + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 709 FRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 857
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAANLSH--RYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFVKLR 127
+ + +E + L KE D S + L ++ EL K L ++
Sbjct: 419 IIQLKLEQQALNKESDDASKKR--LEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIK 476
Query: 128 MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE-KL----AVDV 171
++E + A+RV D Y K+ D Q++A + K KL DV
Sbjct: 477 AEIEQAKI--SLEQARRVGDLAKMSEIQYGKLPDLEKQLEAATQSEGKTMKLLRNKVTDV 534
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E IAEV ++ TGIP S + +R++ L +RV GQN+A++ + A+ + +A G
Sbjct: 535 E-IAEVLARWTGIPVSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + + YG + E+ S+ F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVV 762
>gi|334131884|ref|ZP_08505646.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
gi|333443357|gb|EGK71322.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
Length = 861
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 28/241 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ ++++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 533 VGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDRLHQRVIGQDEAVRLVSDAIRRSRA- 591
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K +A L+ D++ HLI DM + E S+
Sbjct: 592 --GLSDENRPYGSFLFLGPTGVGKTELCKTLAEFLF---DSEEHLIRIDMSEFMEKHSVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYDEGGYLTEAVRRKPYSVILFDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRV-----NEVTGSLFKPSLLKLLDKLV 390
D NT+I+MTS+L Q+ + M + YG V +EV + F+P + +D++V
Sbjct: 705 QGRTVDFKNTVIVMTSNL-GSQMIQQMAGSDYGVVKLAVMSEVK-TFFRPEFINRIDEVV 762
Query: 391 V 391
V
Sbjct: 763 V 763
>gi|440730877|ref|ZP_20910938.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
gi|440376400|gb|ELQ13074.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
Length = 897
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 197/420 (46%), Gaps = 65/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + R D +ELD+ +
Sbjct: 397 HGVEITDPAIVAAATLSN--RYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 454
Query: 82 LRRAVVEYEQLVKE--------------DTDHSSRSFWLRQIDNELKDAFFELVSFVKLR 127
L + ++ E L KE D D R F +D + L +++
Sbjct: 455 LIQLKIQREMLKKEKDEASRQRLADLESDIDKLQREFS--DLDEVWRSEKATLQGATRIK 512
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDV 171
Q+E + A+R +DY+K + +I + +++LA V
Sbjct: 513 EQIEQARVE--LEAAQRRQDYAK-MSEIQYGLLPNLEKQLAAAGDAEHHDFTLVQDRVTA 569
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV S+ TGIP + ++ +R++ L +RV GQ +AI V+ +A+ + +A G
Sbjct: 570 EEIAEVVSRWTGIPVNRMLEGERDKLLRMEDELHRRVVGQQEAIKVVSDAVRRSRA---G 626
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+A L+D+++ +I DM + E S+
Sbjct: 627 LSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEA---MIRIDMSEFMEKHSVARLI 683
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYS++L D++EKA+S + N+LL++L D R
Sbjct: 684 GAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGR 741
Query: 339 AFDLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ E+ T V V + F+P + LD +VV
Sbjct: 742 TVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFVNRLDDIVV 801
>gi|167856244|ref|ZP_02478978.1| chaperone ClpB [Haemophilus parasuis 29755]
gi|167852631|gb|EDS23911.1| chaperone ClpB [Haemophilus parasuis 29755]
Length = 857
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 25/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK +GIP S +E+ +R++ L KRV GQ++A+D + A+ + +A G
Sbjct: 534 EEIAEVLSKASGIPVSKMMEGEKEKLLRMEEVLHKRVIGQSEAVDAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDQD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E +Y V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQENAENMSYDEMKTIVMNVVGQHFRPEFINRIDETVV 762
>gi|437731751|ref|ZP_20831464.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435288924|gb|ELO65917.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
Length = 415
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 93 EIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GL 149
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 150 SDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVG 206
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 207 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 264
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 265 VDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 320
>gi|404416775|ref|ZP_10998589.1| ClpB chaperone [Staphylococcus arlettae CVD059]
gi|403490783|gb|EJY96314.1| ClpB chaperone [Staphylococcus arlettae CVD059]
Length = 451
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 120 EEIGDIVSSWTGIPVSKLVETEREKLLNLSEILHQRVVGQDKAVDLVSDAVVRARAGIK- 178
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E S+
Sbjct: 179 -DPQRPIGSFLFLGPTGVGKTELAKSLASTLF---DSEKHMIRIDMSEYMEKHSVSRLIG 234
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D+IEKA+S + N+LL+IL D R +
Sbjct: 235 APPGYVGHDEGGQLTEAVRRNPYSVILLDEIEKAHSDVFNVLLQIL--DEGRLTDSKGRS 292
Query: 340 FDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E V+ AT V + FKP +L +D +V+
Sbjct: 293 VDFKNTIIIMTSNIGSQVLLEQVKDTGVITEATEKAVMDSLNQYFKPEILNRMDDIVL 350
>gi|268597099|ref|ZP_06131266.1| chaperone clpB [Neisseria gonorrhoeae FA19]
gi|268603397|ref|ZP_06137564.1| ClpB protein [Neisseria gonorrhoeae PID1]
gi|268681877|ref|ZP_06148739.1| ClpB protein [Neisseria gonorrhoeae PID332]
gi|268550887|gb|EEZ45906.1| chaperone clpB [Neisseria gonorrhoeae FA19]
gi|268587528|gb|EEZ52204.1| ClpB protein [Neisseria gonorrhoeae PID1]
gi|268622161|gb|EEZ54561.1| ClpB protein [Neisseria gonorrhoeae PID332]
Length = 857
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQN+A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|416701157|ref|ZP_11829280.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|418825038|ref|ZP_13380360.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|323223751|gb|EGA08056.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|392818162|gb|EJA74054.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
Length = 415
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 93 EIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---GL 149
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 150 SDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVG 206
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 207 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 264
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YGR+ E V F+P + +D++VV
Sbjct: 265 VDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVV 320
>gi|420374600|ref|ZP_14874564.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
gi|391316060|gb|EIQ73544.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
Length = 820
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 324 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 381
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 382 IIQLKLEQQALMKESDEASKKR--LDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 439
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q++A + K + V EI
Sbjct: 440 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 499
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 500 AEVLARWTGIPVARMLEGEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRA---GLSD 556
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 557 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 613
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 614 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 671
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 672 FRNTVVIMTSNLGSDLIQERFGELDYSHMKDMVLGVVSQNFRPEFINRIDEVVV 725
>gi|209694256|ref|YP_002262184.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
LFI1238]
gi|208008207|emb|CAQ78351.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
LFI1238]
Length = 861
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFELVSFVKL---------RMQ 129
+ + +E + LVKE D S + L ++ EL++ + EL K ++
Sbjct: 419 IIQLKIEQQALVKESDDASLK--RLDSLNLELREKERDYSELEEIWKAEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E D S + A+R D Y +I + Q+D + +E K V EI
Sbjct: 477 TELDIARSNMDIARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMSLLKNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + ++ ++++ L RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLSRQTGIPVNKMLEGERDKLLKMEAMLHHRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K++AN ++D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKSLANFMFDSED---AMVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L E++ + YG + E V G F+P L +D+ VV
Sbjct: 709 FKNTVIIMTSNLGSEKIQQHFGELDYGGIKELVMDVVGQHFRPEFLNRVDEAVV 762
>gi|392948965|ref|ZP_10314564.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
pentosus KCA1]
gi|392435784|gb|EIW13709.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
pentosus KCA1]
Length = 867
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 130/244 (53%), Gaps = 29/244 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLK--------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L D+Q + + T+ +V ++ S FKP L +D
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGH--LSDETHSQVMQLVQSRFKPEFLNRID 762
Query: 388 KLVV 391
+++
Sbjct: 763 DIIM 766
>gi|413962472|ref|ZP_11401699.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
gi|413928304|gb|EKS67592.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
Length = 865
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLQIEAKLHERVIGQDEAIGAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ RV E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQGMVGEPQERVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|339638943|emb|CCC18145.1| chaperone protein ClpB [Lactobacillus pentosus IG1]
Length = 867
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 130/244 (53%), Gaps = 29/244 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D+H++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDHMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLK--------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L D+Q + + T+ +V ++ S FKP L +D
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGH--LSDETHSQVMQLVQSRFKPEFLNRID 762
Query: 388 KLVV 391
+++
Sbjct: 763 DIIM 766
>gi|225022530|ref|ZP_03711722.1| hypothetical protein CORMATOL_02570 [Corynebacterium matruchotii
ATCC 33806]
gi|224944769|gb|EEG25978.1| hypothetical protein CORMATOL_02570 [Corynebacterium matruchotii
ATCC 33806]
Length = 848
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 197/410 (48%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFEL--------VSFVKLR-MQV 130
+RR +E L KE TD +S R LR+ + ++ EL + K+R ++
Sbjct: 421 VRRLEIEEMALTKE-TDAASHDRLVKLREELADQRERLGELKARWNNEKAAIDKVRGVKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKLA-------VDVEEIAE 176
E + A+R DY K+ + Q++ ++ ++ LA V + IAE
Sbjct: 480 ELEKMRQASEIAERDGDYGKVAELRYGTIPQLEKQLEQLEQQSLAPTMLSEEVTPDTIAE 539
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S TGIPA E+ + ++ L KRV GQ DA+ + +A+ + A+ G++
Sbjct: 540 VVSAWTGIPAGKMLEGETEKLLHMEAELGKRVVGQLDAVQAVADAVRR---ARAGVADPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK ELAK++A ++ D++ ++ DM Y E ++ +
Sbjct: 597 RPMGSFLFLGPTGVGKTELAKSLAEFMF---DDERAMVRIDMSEYAEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DDGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 712 NTILILTSNLGAGGTPEQMMDAVK--------KAFKPEFINRLDDVVIFD 753
>gi|85859726|ref|YP_461928.1| clpB protein [Syntrophus aciditrophicus SB]
gi|85722817|gb|ABC77760.1| clpB protein [Syntrophus aciditrophicus SB]
Length = 874
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 130/238 (54%), Gaps = 23/238 (9%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E++AEV + TGIP + ++ + ++ RLK+RV GQ++ I + AL + A
Sbjct: 545 VDAEDVAEVVANWTGIPVARMMESDIQKLIHMEDRLKQRVIGQDEGIHAVSAALRR---A 601
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R +G F+F GP GK ELA+A+A ++ DN+ +I DM Y E S+
Sbjct: 602 RSGLQDPNRPIGSFIFLGPTGVGKTELARALAEFMF---DNEQAMIRIDMSEYMEKHSVA 658
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+V+LFD+IEKA+ + N+LL+IL D R
Sbjct: 659 RLIGAPPGYVGYDEGGYLTEAVRRRPYAVLLFDEIEKAHPDVFNILLQIL--DDGRLTDG 716
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--EVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS++ + + ++ LTA R+ E+ + FKP L +D +++
Sbjct: 717 HGRTVDFKNTIVILTSNVGSQWIQDITLTAEEKRLRTMEILRATFKPEFLNRIDDIII 774
>gi|385330270|ref|YP_005884221.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
gi|311693420|gb|ADP96293.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
Length = 858
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 202/422 (47%), Gaps = 72/422 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +++ D A+ A++++ R A +L ++ ID++ + + D + LD+ +
Sbjct: 361 HGVEVTDGAIIAAAKLSH--RYIADRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR------SFWLRQIDNELKD---------AFFELVSFVKL 126
L + +E E L KE TD +S+ S + ++ E D A +K
Sbjct: 419 LIQLKIEREALKKE-TDAASKKRLSELSDVITGVEREYADLEEVWNTEKAALHGSQKIKS 477
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDV 171
R++ D +A+R D K+ + Q+D + E + V
Sbjct: 478 RLEQARIDL----ENARRAGDLGKMSELQYGQIPELERQLDMASQAEMMEMKLLRNRVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAE+ SK TGIP S ++ MR++ L RV GQ++A++ + A+ + +A G
Sbjct: 534 EEIAEIVSKWTGIPVSKMLEGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+A+ L+ D + ++ DM + E S+
Sbjct: 591 LSDPNRPNGSFLFLGPTGVGKTELCKALASFLF---DTEEAMVRIDMSEFMEKHSVARLI 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L+ + + T G
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLE---DGRLTDGQG 704
Query: 339 -AFDLTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+I+MTS+L E+ YEVM A V EV G+ F+P + +D++
Sbjct: 705 RTVDFRNTVIVMTSNLGSDIIQQKAGEENYEVMKNA----VMEVVGTHFRPEFINRVDEV 760
Query: 390 VV 391
VV
Sbjct: 761 VV 762
>gi|78212541|ref|YP_381320.1| ATPase [Synechococcus sp. CC9605]
gi|78197000|gb|ABB34765.1| ATPase [Synechococcus sp. CC9605]
Length = 862
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 136/249 (54%), Gaps = 28/249 (11%)
Query: 161 GKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
G +E+++ D +IAEV +K TGIP + E+ ++++ L +RV GQ+ A+ + +
Sbjct: 530 GLLREEVSED--DIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQHKAVTAVAD 587
Query: 221 ALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGN 279
A+ + +A GLS R + FLF GP GK EL+KA+AN L+D++D ++ DM
Sbjct: 588 AIQRSRA---GLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDA---MVRIDMSE 641
Query: 280 YTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKT 327
Y E ++ + L V++RPY+V+LFD++EKA+ + N++L+IL
Sbjct: 642 YMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL-- 699
Query: 328 DFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSL 382
D R D TNT++I+TS++ + + E+ AT RVNE + F+P
Sbjct: 700 DDGRVTDGQGRTVDFTNTVLILTSNIGSQSILELAGDPEQHRATESRVNEALRAHFRPEF 759
Query: 383 LKLLDKLVV 391
L LD ++
Sbjct: 760 LNRLDDQII 768
>gi|148265968|ref|YP_001232674.1| ATPase [Geobacter uraniireducens Rf4]
gi|146399468|gb|ABQ28101.1| ATPase AAA-2 domain protein [Geobacter uraniireducens Rf4]
Length = 864
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 134/249 (53%), Gaps = 31/249 (12%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD + +AE+ +K TGIP S E+ +R++ RLK RV GQ+DA+ ++ A+ + A
Sbjct: 536 VDGDMVAEIVAKWTGIPVSRMLETESEKLVRMEERLKSRVVGQDDALTLVANAVRR---A 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G F+F GP GK E A+A+A L+ D+D ++ DM Y E ++
Sbjct: 593 RSGLSDPNRPIGSFIFLGPTGVGKTETARALAAFLF---DDDQSIVRIDMSEYQEKHTVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVL--DDGRLTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDE--QVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L + Q Y V + Y R V E FKP L LD++
Sbjct: 708 HGRTVDFRNTVIIMTSNLGSQWIQQYGV---SDYARMRTMVMETLKENFKPEFLNRLDEI 764
Query: 390 VVIDLAVPL 398
V+ A+PL
Sbjct: 765 VIYH-ALPL 772
>gi|261250366|ref|ZP_05942942.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954665|ref|ZP_12597697.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939482|gb|EEX95468.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814941|gb|EGU49872.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 857
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFEL-------------VSFVK 125
+ + +E + L E + S + + +++EL D AF EL +K
Sbjct: 419 IIQLKIEQQALTNEHDEASEKRLTI--LNDELNDKERAFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D +F D R+ + Y +I + Q+D + +E + V EI
Sbjct: 477 SELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
A+V SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 537 ADVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQTEAVEVVANAIRRSRA---GLSD 593
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
Q +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+ +
Sbjct: 594 PNQPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y +V +V F+P L +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSARIQENFATLDYQGMKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|305680258|ref|ZP_07403066.1| ATP-dependent chaperone protein ClpB [Corynebacterium matruchotii
ATCC 14266]
gi|305659789|gb|EFM49288.1| ATP-dependent chaperone protein ClpB [Corynebacterium matruchotii
ATCC 14266]
Length = 848
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 197/410 (48%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFEL--------VSFVKLR-MQV 130
+RR +E L KE TD +S R LR+ + ++ EL + K+R ++
Sbjct: 421 VRRLEIEEMALTKE-TDAASHDRLVKLREELADQRERLGELKARWNNEKAAIDKVRGVKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKLA-------VDVEEIAE 176
E + A+R DY K+ + Q++ ++ ++ LA V + IAE
Sbjct: 480 ELEKMRQASEIAERDGDYGKVAELRYGTIPQLEKQLEQLEQQSLAPTMLSEEVTPDTIAE 539
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S TGIPA E+ + ++ L KRV GQ DA+ + +A+ + A+ G++
Sbjct: 540 VVSAWTGIPAGKMLEGETEKLLHMEAELGKRVVGQLDAVQAVADAVRR---ARAGVADPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK ELAK++A ++ D++ ++ DM Y E ++ +
Sbjct: 597 RPMGSFLFLGPTGVGKTELAKSLAEFMF---DDERAMVRIDMSEYAEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DDGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 712 NTILILTSNLGAGGTPEQMMDAVK--------KAFKPEFINRLDDVVIFD 753
>gi|171058702|ref|YP_001791051.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
gi|170776147|gb|ACB34286.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
Length = 865
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 196/422 (46%), Gaps = 67/422 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R L ++ ID++ + + D + +DK
Sbjct: 360 HGVQITDPAIIAAAELSH--RYVTDRFLPDKAIDLIDEAAAKIKIEMDSKPESMDKLDRR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL-----RQIDNELKD----------------AFFEL 120
L + +E E + KE + S R F L +++ E D F E
Sbjct: 418 LIQLKIEREAVRKEKDEGSVRRFGLIEEEIAKLEREAADLEEIWKAEKAAAQGSKQFMEE 477
Query: 121 VSFVKLRMQVEY---DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKE-------KLAV 169
+ +L+++ E+ DF ++ + K L A+ GK K + V
Sbjct: 478 IESARLQIE-EFKRKGDFNRVAELQYGKLPELEKKLHDAQAKEAGKAKGGQGPQLLRTVV 536
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ ++++G+L RV GQ++AI + A+ + +A
Sbjct: 537 GAEEIAEVVSRATGIPVAKLMQGERDKLLQMEGKLHDRVVGQSEAIIAVSNAIRRSRA-- 594
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R LG FLF GP GK EL KA+A L+ D+D+H+I DM + E S+
Sbjct: 595 -GLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLF---DSDDHMIRIDMSEFMEKHSVSR 650
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 LIGAPPGYVGYDEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL--DDGRLTDGQ 708
Query: 337 IAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+I+MTS+L Q+ E++ A + V + F+P L +D+
Sbjct: 709 GRTVDFKNTVIVMTSNLGSHQIMQMAGQDTELIREAVWAEVKQ----HFRPEFLNRIDEA 764
Query: 390 VV 391
VV
Sbjct: 765 VV 766
>gi|337287439|ref|YP_004626912.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
gi|335360267|gb|AEH45948.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
Length = 872
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 140/264 (53%), Gaps = 22/264 (8%)
Query: 143 KRVKDYSKILDQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQG 202
K +++++K L+++ KE+ V E+IAEV +K TGIP + E+ ++++
Sbjct: 511 KELEEWNKKLEELQKEGKSFLKEE--VTAEDIAEVVAKWTGIPVTRLLESEREKLLKMEE 568
Query: 203 RLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANEL 262
RL +RV GQ+ AI I A+ + +A K R +G F+F GP GK ELAKA+A +
Sbjct: 569 RLAQRVVGQDHAIKAIANAVRRARAGLK--DPNRPIGSFMFLGPTGVGKTELAKALAEFM 626
Query: 263 YDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKI 310
+D + LI FDM Y E ++ + L V++RPYSV+LFD+I
Sbjct: 627 FDTEEA---LIRFDMSEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEI 683
Query: 311 EKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR- 369
EKA+ + N+LL+IL D R + NT+IIMTS++ V E+ R
Sbjct: 684 EKAHPDVFNILLQIL--DDGRLTDSKGRTVNFQNTIIIMTSNIGSHYVMELEDRKDAERL 741
Query: 370 VNEVTGSLFKPSLLKLLDKLVVID 393
V + S F+P L +D++++ +
Sbjct: 742 VMDAVRSHFRPEFLNRIDEIIIFN 765
>gi|240014358|ref|ZP_04721271.1| putative ClpB protein [Neisseria gonorrhoeae DGI18]
gi|240016791|ref|ZP_04723331.1| putative ClpB protein [Neisseria gonorrhoeae FA6140]
gi|240121920|ref|ZP_04734882.1| putative ClpB protein [Neisseria gonorrhoeae PID24-1]
gi|291044107|ref|ZP_06569823.1| ClpB protein [Neisseria gonorrhoeae DGI2]
gi|291012570|gb|EFE04559.1| ClpB protein [Neisseria gonorrhoeae DGI2]
Length = 857
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 194/407 (47%), Gaps = 67/407 (16%)
Query: 41 PRNKATGELRERFI----------DILLKGIKRCLNSRDKYQKELDKHKYFLRRAVVEYE 90
P AT EL +R+I D++ + R D +++DK + + +E
Sbjct: 368 PAIVATAELSDRYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKM 427
Query: 91 QLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQVEYDDFVSC 138
+ KE D S + L ID E L+ + +L S ++ + DD
Sbjct: 428 HVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVK 485
Query: 139 VHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVEEIAEVASKL 181
+ AKR D+++ L ++ A++ GK + KL V +E+AE+ S++
Sbjct: 486 IEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGADEVAEIVSRM 545
Query: 182 TGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGL 240
TGIP S ++ ++++ L +RV GQN+A+ + +A+ + ++ GL+ + G
Sbjct: 546 TGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---SRSGLADPNKPYGS 602
Query: 241 FLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-------- 292
FLF GP GK EL KA+A L+D+ D HLI DM Y E ++ +
Sbjct: 603 FLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIGAPPGYVGYE 659
Query: 293 ----LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLII 348
L V+++PYSV+L D++EKA+ + N+LL++L D R D NT+I+
Sbjct: 660 EGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFKNTVIV 717
Query: 349 MTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 718 MTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|210620978|ref|ZP_03292363.1| hypothetical protein CLOHIR_00306 [Clostridium hiranonis DSM 13275]
gi|210154962|gb|EEA85968.1| hypothetical protein CLOHIR_00306 [Clostridium hiranonis DSM 13275]
Length = 864
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 194/413 (46%), Gaps = 53/413 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R + L ++ ID++ + + D ELD +
Sbjct: 366 HGIRIHDNAIVAAAKLSD--RYISDRYLPDKAIDLIDEASAMIRSEIDSLPTELDSIRRK 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW--------LRQIDNELKDAFFELVSFVK--LRMQVE 131
L E E L+KED D S L+ +++E+ + + S++ ++ +
Sbjct: 424 LFTLETEREALLKEDDDKSKARLIDIQREIAELKSMNDEMTAKYDKEKSYITEIKNLKSQ 483
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARV---HGKFKEK------------LAVDV--EEI 174
DD V +R DY+K + + + KEK L DV +EI
Sbjct: 484 LDDARGRVEKYEREYDYNKAAEVKYSEIPHLEEAIKEKEERMKNASETPLLKEDVTEDEI 543
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
+E+ SK TGIP + E+ ++++ L KRV GQ+ A+ + +A+ + +A K
Sbjct: 544 SEIVSKWTGIPVTKLLEGEREKLLKLEDELHKRVIGQDKAVTAVSDAVIRARAGLK--DE 601
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
+ +G F+F GP GK ELAK +A L+D+ DN +I DM Y E S+
Sbjct: 602 NKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDN---IIRIDMSEYMEKHSVSRLVGPPP 658
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 659 GYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQIL--DDGRLTDNKGKTVDF 716
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVV 391
NT+IIMTS++ + + E T VN+V S FKP L +D +++
Sbjct: 717 KNTIIIMTSNIGSQYLLESGGNITE-EVNDVVMSEMKHRFKPEFLNRVDDIIM 768
>gi|422022041|ref|ZP_16368550.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
gi|414097791|gb|EKT59444.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
Length = 857
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S E+ +R++ +L KRV GQN+A+ + A+ + +A GL
Sbjct: 535 EIAEILARWTGIPVSRMLESEREKLLRMEHQLHKRVIGQNEAVVAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+AN ++ D+D+ +I DM + E ++
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMIRIDMSEFMEKHAVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 707 VDFRNTVIIMTSNLGSDLIQESFGRISYPEMKDMVMEVLTRSFRPEFINRIDEVVV 762
>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
Length = 857
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAANLSH--RYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFVKLR 127
+ + +E + L KE D S + L ++ EL K L ++
Sbjct: 419 IIQLKLEQQALNKESDDASKKR--LEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE-KL----AVDV 171
++E + A+RV D +K+ + Q++A + K KL DV
Sbjct: 477 AEIEQAKI--SLEQARRVGDLAKMSEIQYGKLPGLEKQLEAATQSEGKTMKLLRNKVTDV 534
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E IAEV ++ TGIP S + +R++ L +RV GQN+A++ + A+ + +A G
Sbjct: 535 E-IAEVLARWTGIPVSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + + YG + E+ S+ F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVV 762
>gi|440286532|ref|YP_007339297.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
FGI 57]
gi|440046054|gb|AGB77112.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
FGI 57]
Length = 857
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL+D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELEDKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLAAATQSEGKTMRLLRNRVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQSFRPEFINRIDEVVV 762
>gi|393778254|ref|ZP_10366533.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
gi|392714720|gb|EIZ02315.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
Length = 861
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 136/258 (52%), Gaps = 35/258 (13%)
Query: 157 ARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQND 213
A G + KL V EEIAEV S+ TGIP + T E+ ++++ RL +RV GQ++
Sbjct: 518 AETQGATQNKLLRTQVGAEEIAEVVSRATGIPVAKMMTGEREKLLQMEDRLHQRVVGQDE 577
Query: 214 AIDVIFEALTKPKAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
A+ ++ +A+ + +A GLS R G FLF GP GK EL KA+A+ L+ D++ HL
Sbjct: 578 AVRLVSDAIRRSRA---GLSDENRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHL 631
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM + E S+ + L V+++PYSVVL D++EKA+ + N+
Sbjct: 632 IRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNV 691
Query: 321 LLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEV 373
LL++L D R D NT+I+MTS+L + YE + A + V E
Sbjct: 692 LLQVL--DDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQAMTNEPYEAIKGAVWQEVKE- 748
Query: 374 TGSLFKPSLLKLLDKLVV 391
F+P L +D++VV
Sbjct: 749 ---HFRPEFLNRIDEVVV 763
>gi|402833982|ref|ZP_10882589.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. CM52]
gi|402279051|gb|EJU28094.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. CM52]
Length = 857
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 123/235 (52%), Gaps = 19/235 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IAEV S+ TGIP S T E+ +R++ L +RV GQ++A+ V+ EA+ + +A
Sbjct: 533 VSEEDIAEVVSRWTGIPVSKMLTGEREKLLRLEDVLHERVVGQDEAVRVVSEAILRARAG 592
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELAK +A L+ D++ +I DM Y E S+
Sbjct: 593 IK--DPNRPIGSFIFLGPTGVGKTELAKTLAEALF---DDERSMIRIDMSEYMEKHSVAR 647
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+L D+IEKA+ + N+LL+IL D R
Sbjct: 648 LIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLLQIL--DDGRLTDGK 705
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ NT+IIMTS+L ++ V E+ F+P L +D +VV
Sbjct: 706 GRVVNFKNTVIIMTSNLGSHEILNKDFEEAQTAVKELLKEYFRPEFLNRVDDIVV 760
>gi|328871453|gb|EGG19823.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
Length = 892
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 203/423 (47%), Gaps = 65/423 (15%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDIL---LKGIKRCLNSRDKYQKEL 75
E H ++I D AL +++++A R L ++ ID+L I+ LNS+ + +L
Sbjct: 356 ETHHGVRITDTALVVSAQLAN--RYITNRFLPDKAIDLLDEACANIRVQLNSQPEAIDQL 413
Query: 76 DKHKYFLRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKDAFFELVS-------F 123
++ K L+ VE L KE+ D S L +I++EL+ S
Sbjct: 414 ERRKLQLQ---VEQTALEKEEDDGSKHRLETVKEELAKIEDELQPLMARYQSERSRVDKS 470
Query: 124 VKLRMQVEYDDFVSCVHDAKRVKDYSKILD-------QIDARVHGKFKEKLA-------- 168
LR ++E D + DA+R D + D ++ ++ KE+
Sbjct: 471 RDLRKKLE--DVRVKLQDAERRHDLQLVADLRYYVIPDLEKQIESTNKERKEAKKDDLVS 528
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
V E IAEV ++ TGIP S +R + + L +RV GQ +A+D + +A+ + K
Sbjct: 529 EIVTPENIAEVVARWTGIPVSKLSQTERQRTLHLADHLHQRVVGQYEAVDAVADAVMRSK 588
Query: 227 AAKKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
A GL+ Q LG FLF GP GK ELAKA+A EL+ D++ H++ DM + E S
Sbjct: 589 A---GLARLNQPLGSFLFLGPTGVGKTELAKALAYELF---DDEKHMVRIDMSEFMEQHS 642
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L+ V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 643 VARLIGAPPGYVGYDEGGQLSEAVRRKPYSVVLFDEVEKAHPQVWNVLLQVL--DDGRLT 700
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVY-EVMLTATYGRV-NEVTGSL---FKPSLLKLLDK 388
D +N +IIMTS+L + + E L V + V G + F+P L LD
Sbjct: 701 DGKGKTVDFSNVVIIMTSNLGSQYLLAEAQLETISQHVKDSVMGEVRKHFRPEFLNRLDD 760
Query: 389 LVV 391
+V+
Sbjct: 761 MVI 763
>gi|268601078|ref|ZP_06135245.1| chaperone clpB [Neisseria gonorrhoeae PID18]
gi|268585209|gb|EEZ49885.1| chaperone clpB [Neisseria gonorrhoeae PID18]
Length = 857
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 194/407 (47%), Gaps = 67/407 (16%)
Query: 41 PRNKATGELRERFI----------DILLKGIKRCLNSRDKYQKELDKHKYFLRRAVVEYE 90
P AT EL +R+I D++ + R D +++DK + + +E
Sbjct: 368 PAIVATAELSDRYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKM 427
Query: 91 QLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQVEYDDFVSC 138
+ KE D S + L ID E L+ + +L S ++ + DD
Sbjct: 428 HVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVK 485
Query: 139 VHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVEEIAEVASKL 181
+ AKR D+++ L ++ A++ GK + KL V +E+AE+ S++
Sbjct: 486 IEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGADEVAEIVSRM 545
Query: 182 TGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGL 240
TGIP S ++ ++++ L +RV GQN+A+ + +A+ + ++ GL+ + G
Sbjct: 546 TGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---SRSGLADPNKPYGS 602
Query: 241 FLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-------- 292
FLF GP GK EL KA+A L+D+ D HLI DM Y E ++ +
Sbjct: 603 FLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIGAPPGYVGYE 659
Query: 293 ----LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLII 348
L V+++PYSV+L D++EKA+ + N+LL++L D R D NT+I+
Sbjct: 660 EGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFKNTVIV 717
Query: 349 MTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 718 MTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|296135529|ref|YP_003642771.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
gi|295795651|gb|ADG30441.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
Length = 861
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ + ++ RL +RV GQ++AI + +A+ + +A
Sbjct: 535 VGAEEIAEVVSRATGIPVSKLVQGERDKLVHMEERLHRRVVGQDEAIRAVSDAIRRSRA- 593
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS RR G FLF GP GK EL K +A L+ D D H++ DM + E S+
Sbjct: 594 --GLSDPRRPYGSFLFLGPTGVGKTELTKGLAEFLF---DTDEHIVRLDMSEFMEKHSVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + A V E + F+P L +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQQAIRDAVWEEVKAHFRPEFLNRIDEVVV 765
>gi|436841908|ref|YP_007326286.1| protein disaggregation chaperone [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432170814|emb|CCO24185.1| protein disaggregation chaperone [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 874
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 232/508 (45%), Gaps = 76/508 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++Q R +L ++ ID++ + D ELDK
Sbjct: 366 HGVRISDAALVEAATLSQ--RYITDRQLPDKAIDLIDEAAAMIRTEIDSQPYELDKINRQ 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDN--ELKDAFFELV-----------SFVKLRM 128
+ + +E E L +E+ D +SR + D+ E+K ELV + L+
Sbjct: 424 ILQTEIEREALRREE-DQASRERLSKLEDSLTEMKIKQSELVEQWEKEKASIDTVRNLKA 482
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILDQIDARVHG--KFKEKLAVDVE-------------- 172
Q+E + +A+R DY++ + + + G K E++ VD+E
Sbjct: 483 QIEQTKL--QIEEAERSLDYNRAAELKYSTLLGLEKRLEEIQVDIEGGEDKASSNGSRLL 540
Query: 173 -------EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
+IA + S+ TGIP + E+ +R++ L RV GQ++A+ + EA+ +
Sbjct: 541 KEFVGPDDIAGIISRWTGIPVTRLVEGEREKLLRLEDILHGRVIGQDEAVRAVSEAVLRA 600
Query: 226 KAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
+A K S R +G F+F GP GK EL KA+A L+D+ +N ++ DM Y E +
Sbjct: 601 RAGLKDPS--RPIGSFIFLGPTGVGKTELCKALAEALFDSEEN---IVRMDMSEYMEKHA 655
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSVVLFD+IEKA+S + N+LL+IL D R
Sbjct: 656 VARLIGAPPGYIGYDEGGQLTEAIRRKPYSVVLFDEIEKAHSDVFNVLLQIL--DDGRIT 713
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVM------LTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+IIMTS+L + + E + V V F+P L +D
Sbjct: 714 DSQGRTIDCKNTIIIMTSNLGSQLLLEGIEPDGEFKNGVQENVMNVLSGHFRPEFLNRVD 773
Query: 388 KLVVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVI-VCPSTSALVHIASNAARKYGQ 446
+ V+ PLL++ L+ + E + R K + V + A + AS YG
Sbjct: 774 ETVLFK---PLLESDLKLIVDLQLEGLRARLGGQKMSLEVTENAKAFIAHASYDP-VYG- 828
Query: 447 NGEGLKRWMD---QRPSADHVIDKFLRD 471
L+R++ + P A +I LR+
Sbjct: 829 -ARPLRRYIQAHLETPLAKQIIGGDLRE 855
>gi|167836362|ref|ZP_02463245.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|424903869|ref|ZP_18327382.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|390931742|gb|EIP89143.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
Length = 865
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 196/420 (46%), Gaps = 63/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D +E+D+
Sbjct: 361 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I+ E++ E ++ +++
Sbjct: 419 LIQLKIEREAVKKEQDEASQKRLAL--IEEEIERLGREYADLEEIWTAEKAAVQGSAQLK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARV-----------HGKFKEKL---A 168
E D + + +R K+ L Q++AR+ H + +L
Sbjct: 477 EEIDKVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVAQAEESEQHNPTRPRLLRTQ 536
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M A+ + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGASQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|237653311|ref|YP_002889625.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
gi|237624558|gb|ACR01248.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
Length = 860
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 132/241 (54%), Gaps = 28/241 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++A+ ++ +A+ + +A
Sbjct: 533 VGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDKLHERVVGQDEAVRLVADAIRRSRA- 591
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K +AN L+ D++ HLI DM + E S+
Sbjct: 592 --GLSDENRPYGSFLFLGPTGVGKTELCKTLANFLF---DSEEHLIRIDMSEFMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN-----EVTGSLFKPSLLKLLDKLV 390
D NT+I+MTS+L Q+ + M YG + EV + F+P + +D++V
Sbjct: 705 QGRTVDFKNTVIVMTSNL-GSQMIQAMAGDDYGVIKLAVMAEVK-TYFRPEFINRIDEVV 762
Query: 391 V 391
V
Sbjct: 763 V 763
>gi|398801707|ref|ZP_10560945.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
gi|398091391|gb|EJL81836.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
Length = 857
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 196/418 (46%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRLQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF-----------ELVSFVKLR-MQ 129
+ + +E + L KE D S + L +++EL E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASLKR--LEMLESELDQKEREYAELEEEWKAEKASLTGTQNIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---KLAVDVE-------------- 172
E + + A+RV D L Q+ +GK E +LA+ +
Sbjct: 477 AELEQARLTMEQARRVGD----LGQMSELQYGKIPELEKQLAIATQSEGKTMKLLRNRVT 532
Query: 173 --EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EIA+V ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A
Sbjct: 533 DVEIADVLARWTGIPVARMMEGEREKLLRMEQELHARVIGQNEAVEAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN L+D++D ++ DM + E S+
Sbjct: 590 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA---MVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E + Y + E V G F+P + +D +VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQERFGSLDYPEMKEVVMTVVGQHFRPEFINRIDDMVV 762
>gi|297850252|ref|XP_002893007.1| hypothetical protein ARALYDRAFT_889286 [Arabidopsis lyrata subsp.
lyrata]
gi|297338849|gb|EFH69266.1| hypothetical protein ARALYDRAFT_889286 [Arabidopsis lyrata subsp.
lyrata]
Length = 695
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 200/417 (47%), Gaps = 58/417 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + IQD AL ++++++ R +L ++ ID++ + D +E+D +
Sbjct: 167 HGVSIQDTALVVSAQLS--ARYITGRKLPDKAIDLVDEACAYVRVQLDSQPEEIDDFERK 224
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE---------- 131
+ +E L K D D +S + L ++ EL D +L LR Q E
Sbjct: 225 RMQLKIELHALEK-DKDKASVA-RLVKVQKELDDLRDKLQPLT-LRYQNEKKIIDEIRKL 281
Query: 132 ---YDDFVSCVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVEEI 174
++ +S + +A+R + D Q++ A++ KE L V + I
Sbjct: 282 KQKREELMSALKEAERQHKLPRAADLRYGEIQQVESGLAKLEESSKENLMLTETVGPDNI 341
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AE+ S+ TGIP + +E+ + RL +RV GQ+ A+D + +A+ + +A GL
Sbjct: 342 AEIVSQWTGIPVTKLDQNDKEKLNSLADRLHQRVVGQDQAVDAVADAILRSRA---GLGR 398
Query: 235 RRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+Q G FLF GP GK ELAKA+A +L+D+ +N L+ DM Y E SI +
Sbjct: 399 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDD---ENLLVRLDMSEYMEKYSITRLIGAS 455
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+ RPY VVLFD++EKA+ SI N+LL++L D R D
Sbjct: 456 PGYIGYEEGGQLTEAVRNRPYCVVLFDEVEKAHVSIFNILLQVL--DEGRLTDSQGRTVD 513
Query: 342 LTNTLIIMTSDLKDEQVY-----EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
N++IIMT+++ + + EV + RV + F+P LL LD++VV D
Sbjct: 514 FKNSMIIMTANIGADHLISGLTGEVTMQVAQDRVMKAVRKHFRPELLNRLDEIVVFD 570
>gi|410693234|ref|YP_003623855.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
gi|294339658|emb|CAZ88018.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
Length = 861
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ + ++ RL +RV GQ++AI + +A+ + +A
Sbjct: 535 VGAEEIAEVVSRATGIPVSKLVQGERDKLVHMEERLHRRVVGQDEAIRAVSDAIRRSRA- 593
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS RR G FLF GP GK EL K +A L+ D D H++ DM + E S+
Sbjct: 594 --GLSDPRRPYGSFLFLGPTGVGKTELTKGLAEFLF---DTDEHIVRLDMSEFMEKHSVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + A V E + F+P L +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQQAIRDAVWEEVKAHFRPEFLNRIDEVVV 765
>gi|54310128|ref|YP_131148.1| clpB, ATPase with chaperone activity [Photobacterium profundum SS9]
gi|46914567|emb|CAG21346.1| putative clpB, ATPases with chaperone activity [Photobacterium
profundum SS9]
Length = 861
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 32/268 (11%)
Query: 148 YSKILD---QIDARVHGKFKE----KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRV 200
Y KI + Q+D + +E K V EIAEV SK TGIP + ++ +R+
Sbjct: 507 YGKIPELEKQLDLAAQAEMQEMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDKLLRM 566
Query: 201 QGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIA 259
+ L +RV GQN+A++ + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 567 EDELHQRVIGQNEAVEAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLA 623
Query: 260 NELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLF 307
N ++D+ DN ++ DM + E S+ + L V++RPYSV+L
Sbjct: 624 NFMFDSEDN---MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 680
Query: 308 DKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY 367
D++EKA+ + N+LL++L D R D NT+IIMTS+L +++ E Y
Sbjct: 681 DEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNY 738
Query: 368 ----GRVNEVTGSLFKPSLLKLLDKLVV 391
V EV F+P + +D+ VV
Sbjct: 739 EGIKNMVLEVVSQYFRPEFINRVDETVV 766
>gi|94265726|ref|ZP_01289463.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium
MLMS-1]
gi|93453739|gb|EAT04115.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium
MLMS-1]
Length = 867
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 137/273 (50%), Gaps = 35/273 (12%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IA+V +K TGIP +E+ + G L KRV GQ +AI + A+ + +A
Sbjct: 536 VDEEDIAKVVAKWTGIPVDKLLEGEKEKLVAADGELSKRVVGQREAISAVANAVRRARAG 595
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ R LG F+F GP GK ELA+++A L+ D + +I DM + E S+
Sbjct: 596 LQ--DPNRPLGSFIFMGPTGVGKTELARSLAAFLF---DTEKAMIRLDMSEFMEKHSVAR 650
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+LFD+IEKA+ + N+LL+IL D R
Sbjct: 651 LIGAPPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQIL--DDGRMTDGQ 708
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEV---MLTATYGRVNEVTGSLFKPSLLKLLDKLV--- 390
D NT++IMTS+L + + E+ RV+E+ + F+P L LD+++
Sbjct: 709 GRTVDFKNTILIMTSNLGSQLIMELGEARREEIKTRVDEILHAQFRPEFLNRLDEIIIFH 768
Query: 391 ---------VIDLAVPLLDTTRLLLREWACEET 414
+IDL LL T RL R + E T
Sbjct: 769 ALSREDLRQIIDLQAELL-TGRLAERHYQIELT 800
>gi|431800678|ref|YP_007227581.1| ATPase [Pseudomonas putida HB3267]
gi|430791443|gb|AGA71638.1| ATPase [Pseudomonas putida HB3267]
Length = 854
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQN+A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 ELLHQRVIGQNEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + GS F+P + +D++VV +
Sbjct: 736 RAAVMDAVGSHFRPEFINRIDEVVVFE 762
>gi|54035760|sp|Q6LMY0.2|CLPB_PHOPR RecName: Full=Chaperone protein ClpB
Length = 857
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 32/268 (11%)
Query: 148 YSKILD---QIDARVHGKFKE----KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRV 200
Y KI + Q+D + +E K V EIAEV SK TGIP + ++ +R+
Sbjct: 503 YGKIPELEKQLDLAAQAEMQEMSLLKNKVTDAEIAEVLSKQTGIPVAKMLEGERDKLLRM 562
Query: 201 QGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIA 259
+ L +RV GQN+A++ + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 563 EDELHQRVIGQNEAVEAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLA 619
Query: 260 NELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLF 307
N ++D+ DN ++ DM + E S+ + L V++RPYSV+L
Sbjct: 620 NFMFDSEDN---MVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676
Query: 308 DKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY 367
D++EKA+ + N+LL++L D R D NT+IIMTS+L +++ E Y
Sbjct: 677 DEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLNY 734
Query: 368 ----GRVNEVTGSLFKPSLLKLLDKLVV 391
V EV F+P + +D+ VV
Sbjct: 735 EGIKNMVLEVVSQYFRPEFINRVDETVV 762
>gi|302556316|ref|ZP_07308658.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302473934|gb|EFL37027.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 879
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 199/423 (47%), Gaps = 61/423 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEIFHGVKIQDTALVSAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE TD +S++ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEEAALSKE-TDPASKT-RLEELRKELADLRSEADAKHAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK-----------------RVKDYSKILDQIDARVHGKFKE----KL 167
Q + H+A+ R++D + L + ++ K E +
Sbjct: 478 QELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQGENRLLRE 537
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V EEIAE+ + TG+P + E+ +R+ L++RV GQ++A+ ++ +A+ + ++
Sbjct: 538 VVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVADAIIRARS 597
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ RR +G F+F GP GK ELAK +A L+D+ DN ++ DM Y E ++
Sbjct: 598 GIR--DPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEDN---MVRLDMSEYQERHTVS 652
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD+IEKA++ + N LL+IL D R
Sbjct: 653 RLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQIL--DDGRITDA 710
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+IIMTS++ E + E+ A + E+ G F+P L +D
Sbjct: 711 QGRTVDFRNTVIIMTSNIGSEHLLDGVTAEGEIKPDARALVMGELRGH-FRPEFLNRVDD 769
Query: 389 LVV 391
+V+
Sbjct: 770 IVL 772
>gi|425744089|ref|ZP_18862150.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-323]
gi|425491890|gb|EKU58167.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-323]
Length = 859
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 196/414 (47%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS--FWLRQIDNELKDAFFELVSFVKL---------RMQV 130
L + ++ E VK+D D S++ L Q E + + +L K + QV
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQV 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D S + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARSALEKAKREGDLAEAARLQYGVIPELQKRLEQAEVAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVAKMLQGEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ AT V V S F+P + +D+LV+
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGEGATDDEVRAVVMSAVTQHFRPEFINRIDELVI 760
>gi|419801894|ref|ZP_14327097.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK262]
gi|385192261|gb|EIF39667.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK262]
Length = 856
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 197/414 (47%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLDMLEKELSDKEREYAELEEVWKSEKAALSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E D + + A+R D SK+ + Q+ A G+ KE + V EEI
Sbjct: 477 QELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLAAAETGEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + +YG V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSD-LIQGSKDESYGEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|424776135|ref|ZP_18203120.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
gi|422888595|gb|EKU30981.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
Length = 863
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 202/433 (46%), Gaps = 91/433 (21%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++Q R L ++ ID++ + R D + +DK
Sbjct: 361 HGVAITDPAIVAAAELSQ--RYITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDF------ 135
+ + +E E ++K DTD +S+ L+ I++E++ ++Q EY+D+
Sbjct: 419 IIQLKIEREAVIK-DTDEASQR-RLQAINDEME------------KLQREYNDYEEIWKA 464
Query: 136 -VSCVHDAKRVKD-YSKI------------LDQIDARVHGKFKE---------------- 165
+ V ++ VK+ K+ D++ +GK E
Sbjct: 465 EKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLAELQYGKLPELEERLKAAEANMDKAD 524
Query: 166 -------KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVI 218
+ V EEIAEV S+ TGIP S E+ ++++ L KRV GQ +A+ ++
Sbjct: 525 QDKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLQMEDYLHKRVVGQGEAVRLV 584
Query: 219 FEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDM 277
+A+ + +A GLS R G FLF GP GK EL KA+AN L+D+ D H+I DM
Sbjct: 585 SDAIRRSRA---GLSDPSRPYGSFLFLGPTGVGKTELTKALANFLFDSED---HMIRIDM 638
Query: 278 GNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKIL 325
+ E S+ + L V+++PYSV+L D++EKA+ + N+LL++L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 326 KTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLF 378
D R D NT+IIMTS+L + + Y+V+ + V + F
Sbjct: 699 --DDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPYDVIKEVVWEEVKQ----HF 752
Query: 379 KPSLLKLLDKLVV 391
+P L +D++VV
Sbjct: 753 RPEFLNRIDEVVV 765
>gi|310823094|ref|YP_003955452.1| ATP-dependent chaperone protein clpb [Stigmatella aurantiaca
DW4/3-1]
gi|309396166|gb|ADO73625.1| ATP-dependent chaperone protein ClpB [Stigmatella aurantiaca
DW4/3-1]
Length = 876
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 199/425 (46%), Gaps = 69/425 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD+AL A+ ++ R A L ++ ID++ + R D E+D +
Sbjct: 360 HGVRIQDQALVAAANLSH--RYIADRFLPDKAIDLVDEASSRLRIEIDSMPTEIDDIRRK 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSF----------------VK 125
+ + +E + L KE HS L QI+ EL + S +K
Sbjct: 418 MTQLEIERQGLKKETDPHSQER--LGQIEKELANLSERFTSLKAHWDAEKSAITGIRELK 475
Query: 126 LRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV---HGKFKE--------KL 167
+++ +D S A+R D ++ +L ++ V + K E K
Sbjct: 476 EKLEKAKNDQAS----AERQGDLNRAAELKFGVLPSLEKEVTAQNAKLAELQKSQKFLKE 531
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
VD E+IAEV +K T IP S ++ ++++ RL RV GQ+ AI+ + A+ +
Sbjct: 532 EVDAEDIAEVVAKWTHIPVSKLLEGEVQKLVKMEDRLSNRVIGQHSAIEAVSNAVRR--- 588
Query: 228 AKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
A+ GL R +G F+F GP GK E AKA+A L+ D+D+ +I DM Y E S+
Sbjct: 589 ARSGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLF---DDDSSMIRIDMSEYMEKHSV 645
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V++RPYSV+LFD+IEKA+ + N+LL+IL D R
Sbjct: 646 ARLVGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNILLQIL--DEGRLTD 703
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDK 388
D NT++I+TS++ + + E M T G V + S F+P L +D+
Sbjct: 704 SQGRTVDFKNTVLILTSNIGSQALQEGMAGKETLDERTRGEVMDALRSHFRPEFLNRVDE 763
Query: 389 LVVID 393
+V+ +
Sbjct: 764 IVLFE 768
>gi|115379537|ref|ZP_01466628.1| AAA ATPase [Stigmatella aurantiaca DW4/3-1]
gi|115363446|gb|EAU62590.1| AAA ATPase [Stigmatella aurantiaca DW4/3-1]
Length = 803
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 199/425 (46%), Gaps = 69/425 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD+AL A+ ++ R A L ++ ID++ + R D E+D +
Sbjct: 287 HGVRIQDQALVAAANLSH--RYIADRFLPDKAIDLVDEASSRLRIEIDSMPTEIDDIRRK 344
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSF----------------VK 125
+ + +E + L KE HS L QI+ EL + S +K
Sbjct: 345 MTQLEIERQGLKKETDPHSQER--LGQIEKELANLSERFTSLKAHWDAEKSAITGIRELK 402
Query: 126 LRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV---HGKFKE--------KL 167
+++ +D S A+R D ++ +L ++ V + K E K
Sbjct: 403 EKLEKAKNDQAS----AERQGDLNRAAELKFGVLPSLEKEVTAQNAKLAELQKSQKFLKE 458
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
VD E+IAEV +K T IP S ++ ++++ RL RV GQ+ AI+ + A+ +
Sbjct: 459 EVDAEDIAEVVAKWTHIPVSKLLEGEVQKLVKMEDRLSNRVIGQHSAIEAVSNAVRR--- 515
Query: 228 AKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
A+ GL R +G F+F GP GK E AKA+A L+ D+D+ +I DM Y E S+
Sbjct: 516 ARSGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLF---DDDSSMIRIDMSEYMEKHSV 572
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V++RPYSV+LFD+IEKA+ + N+LL+IL D R
Sbjct: 573 ARLVGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNILLQIL--DEGRLTD 630
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDK 388
D NT++I+TS++ + + E M T G V + S F+P L +D+
Sbjct: 631 SQGRTVDFKNTVLILTSNIGSQALQEGMAGKETLDERTRGEVMDALRSHFRPEFLNRVDE 690
Query: 389 LVVID 393
+V+ +
Sbjct: 691 IVLFE 695
>gi|393757526|ref|ZP_10346350.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165218|gb|EJC65267.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 863
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 202/433 (46%), Gaps = 91/433 (21%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++Q R L ++ ID++ + R D + +DK
Sbjct: 361 HGVAITDPAIVAAAELSQ--RYITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDF------ 135
+ + +E E ++K DTD +S+ L+ I++E++ ++Q EY+D+
Sbjct: 419 IIQLKIEREAVIK-DTDEASQR-RLQAINDEME------------KLQREYNDYEEVWKA 464
Query: 136 -VSCVHDAKRVKD-YSKI------------LDQIDARVHGKFKE---------------- 165
+ V ++ VK+ K+ D++ +GK E
Sbjct: 465 EKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLAELQYGKLPELEERLKAAEANMDKAD 524
Query: 166 -------KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVI 218
+ V EEIAEV S+ TGIP S E+ ++++ L KRV GQ +A+ ++
Sbjct: 525 QDKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLQMEDYLHKRVVGQGEAVRLV 584
Query: 219 FEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDM 277
+A+ + +A GLS R G FLF GP GK EL KA+AN L+D+ D H+I DM
Sbjct: 585 SDAIRRSRA---GLSDPSRPYGSFLFLGPTGVGKTELTKALANFLFDSED---HMIRIDM 638
Query: 278 GNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKIL 325
+ E S+ + L V+++PYSV+L D++EKA+ + N+LL++L
Sbjct: 639 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL 698
Query: 326 KTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLF 378
D R D NT+IIMTS+L + + Y+V+ + V + F
Sbjct: 699 --DDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPYDVIKEVVWEEVKQ----HF 752
Query: 379 KPSLLKLLDKLVV 391
+P L +D++VV
Sbjct: 753 RPEFLNRIDEVVV 765
>gi|375256817|ref|YP_005015987.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
gi|365906295|gb|AEX01748.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
Length = 857
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASIK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKELVLGVVSQSFRPEFINRIDEVVV 762
>gi|398848122|ref|ZP_10604958.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
gi|398249906|gb|EJN35274.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
Length = 854
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQN+A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 DLLHQRVIGQNEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + GS F+P + +D++VV +
Sbjct: 736 RAAVMDAVGSHFRPEFVNRIDEVVVFE 762
>gi|375105822|ref|ZP_09752083.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
gi|374666553|gb|EHR71338.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
Length = 862
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 132/239 (55%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ ++++ +L +RV GQ++AI + +A+ + +
Sbjct: 534 VGAEEIAEVVSRATGIPVSKLMQGERDKLLKMEDKLHERVVGQDEAITAVSDAIRR---S 590
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R G FLF GP GK EL KA+AN L+D+ D HLI DM Y E S+
Sbjct: 591 RSGLSDPNRPYGSFLFLGPTGVGKTELCKALANFLFDSED---HLIRVDMSEYMEKHSVS 647
Query: 288 HF---------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+D AL V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 RMIGAPPGYVGYDEGGALTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
D NT+++MTS+L Q+ +++ ++ + V + F+P L +D+ VV
Sbjct: 706 QGRTVDFKNTVVVMTSNLGSHQIMQMVGQSSEDIRDAVWAEVKEHFRPEFLNRIDETVV 764
>gi|332284688|ref|YP_004416599.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
gi|330428641|gb|AEC19975.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
Length = 864
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + ++ ++++ L +RV GQN+A+ ++ +A+ + +A
Sbjct: 536 VGAEEIAEVVSRATGIPVAKMMQGERDKLLKMEDFLHQRVVGQNEAVSLVADAIRRSRA- 594
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+AN L+ D++ H+I DM + E S+
Sbjct: 595 --GLSDPSRPYGSFLFLGPTGVGKTELTKALANFLF---DSEEHMIRIDMSEFMEKHSVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D+IEKA+ + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEIEKAHPDVFNVLLQVL--DDGRLTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT----GSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + + M Y V EV F+P L +D++VV
Sbjct: 708 QGRTVDFRNTVIIMTSNLGSQHI-QSMAGQPYEVVKEVIWDELKQSFRPEFLNRIDEVVV 766
>gi|419846184|ref|ZP_14369441.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK2019]
gi|386414479|gb|EIJ29035.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
HK2019]
Length = 856
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 197/414 (47%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLDMLEKELADKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E D + + A+R D SK+ + Q+ A G+ KE + V EEI
Sbjct: 477 QELDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLAAAETGEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + +YG V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSD-LIQGSKDESYGEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|302529318|ref|ZP_07281660.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302438213|gb|EFL10029.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 874
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 205/430 (47%), Gaps = 75/430 (17%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL +A+ + H R + L ++ ID++ + D ELD+
Sbjct: 362 LEVFHGVKIQDSAL-VAAVVLSH-RYISDRFLPDKAIDLVDEACAMLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
L R +E L KE TD +S++ L ++ EL D E M+ +++ S
Sbjct: 420 LSRRLTRTEIEEAALAKE-TDAASKA-RLEELRRELVDLRAEAGG-----MRTQWEAERS 472
Query: 138 CVHD-----------------AKRVKDYSKI-------LDQIDARVHGKFKEKLA----- 168
+H A+R D +K L +++ R+ G+ +E LA
Sbjct: 473 ALHKVQALREEIEQVSRDADAAERAYDLNKAAELRHGKLPELERRLVGE-EELLATRQAG 531
Query: 169 -------VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEA 221
V EEIA V S+ TGIP S E+ +R+ L +RV GQ++A+ ++ +A
Sbjct: 532 TRLLREVVTEEEIAAVVSRWTGIPVSRLQEGEREKLLRLDELLHERVIGQDEAVQLVADA 591
Query: 222 LTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYT 281
+ + ++ K RR +G FLF GP GK ELAKA+A +L+D DN ++ DM Y
Sbjct: 592 IIRARSRIK--DPRRPIGSFLFLGPTGVGKTELAKALAADLFDTEDN---IVRIDMSEYQ 646
Query: 282 ELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDF 329
E ++ + L V+++PYSVVLFD+IEKA++ + N LL++L D
Sbjct: 647 ERHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVL--DD 704
Query: 330 NRKATRGIAAFDLTNTLIIMTSD-----LKDEQVYEVMLTATYGRVNEVTGSL---FKPS 381
R D NT+IIMTS+ L D E +T + +EV +L F+P
Sbjct: 705 GRLTDAQGRTVDFRNTVIIMTSNIGAHFLLDGVNAEGEITESA--RDEVMAALRGHFRPE 762
Query: 382 LLKLLDKLVV 391
L +D +V+
Sbjct: 763 FLNRIDDIVL 772
>gi|259505834|ref|ZP_05748736.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Corynebacterium efficiens YS-314]
gi|259166576|gb|EEW51130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Corynebacterium efficiens YS-314]
Length = 839
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 194/413 (46%), Gaps = 61/413 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 350 HGVRIQDSALVAAAELSH--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 407
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE---YDD---- 134
+RR +E L KE TD +SR L ++ +EL D E +S +K R Q E DD
Sbjct: 408 VRRLEIEEVALTKE-TDVASRE-RLERLRSELADE-REKLSELKARWQNEKAVIDDVRKF 464
Query: 135 ------FVSCVHDAKRVKDYSKILDQIDARVH------GKFKEKLA----------VDVE 172
S A+R DY ++ + R+ + +EK+ V E
Sbjct: 465 KEELEALRSESDIAEREGDYGRVAELRYGRIPELEKKIAEAEEKIGGADNSMLTEEVTPE 524
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IAEV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 525 VIAEVVSAWTGIPAGKMMQGETEKLLNMERFLGKRVVGQHEAVTAVSDAVRRSRAGVA-- 582
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK ELAKA++ L+ D++ ++ DM Y+E S+ +
Sbjct: 583 DPNRPTGSFLFLGPTGVGKTELAKAVSEFLF---DDERAMVRIDMSEYSEKHSVARLVGA 639
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY+ VLFD++EKA+ + ++LL++L D R
Sbjct: 640 PPGYVGYDQGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVL--DDGRLTDGQGRTV 697
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT++I+TS+L E M+ A FKP + LD +VV D
Sbjct: 698 DFRNTILILTSNLGAGGTREQMMDAVK--------MAFKPEFINRLDDIVVFD 742
>gi|365539747|ref|ZP_09364922.1| ClpV protein [Vibrio ordalii ATCC 33509]
Length = 858
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 198/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELK---DAFFEL-------------VSFVK 125
+ + +E + L E + S + L+ ++ ELK F EL +K
Sbjct: 419 IIQLKIEQQALTNEHDEASEK--RLQVLNEELKVKEREFAELEEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKEKL-----AVDVEE 173
+ Q D DF D R+ + Y +I + Q+D + +E DVE
Sbjct: 477 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDVE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV SK TGIP S + +E+ ++++ L +RV GQ +A++V+ A+ + +A GLS
Sbjct: 536 IAEVLSKQTGIPVSKMLEEEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L ++++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L Q+ E + Y V E+ G F+P L +D+ VV
Sbjct: 708 DFRNTVVIMTSNLGSSQIQEKFASLDYEGIKKEVMEIVGKHFRPEFLNRVDESVV 762
>gi|424780576|ref|ZP_18207449.1| ClpB protein [Catellicoccus marimammalium M35/04/3]
gi|422842978|gb|EKU27425.1| ClpB protein [Catellicoccus marimammalium M35/04/3]
Length = 890
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 194/419 (46%), Gaps = 62/419 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D AL A+ ++ R L ++ ID++ + + ELD+
Sbjct: 362 HGVTIHDNALVAAATLSN--RYITDRYLPDKAIDLVDEACATIRVEMNSMPTELDQ--IT 417
Query: 82 LRRAVVEYE-QLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC-- 138
R+ +E E Q +K++TD +S+ L + +EL D E + ++LR Q E D +
Sbjct: 418 RRKMQLEIEEQALKKETDDASKK-RLEILQSELAD-LNEEANKMQLRWQKEKDSVEAINQ 475
Query: 139 -----------VHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVD 170
+ DA+ D K L++++ H E L +V
Sbjct: 476 KRAELEKTKIELEDAENKYDLEKAAVLRHGTIPSLEHELNELEKEAHKDNGESLVQESVT 535
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
+EI+ V S++TGIP + E+ +R+ L +RV GQ +A+D + +A+ + +A +
Sbjct: 536 ADEISRVVSRMTGIPVTKLAEGEREKILRLNDTLHERVIGQEEAVDAVSDAVIRSRAGLQ 595
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
R LG FLF GP GK ELAKA+A L+ D++ H++ DM Y E ++
Sbjct: 596 --DPNRPLGSFLFLGPTGVGKTELAKALAENLF---DSEEHIVRIDMSEYMEKHNVSRLV 650
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 651 GAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDSQGR 708
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATY------GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L +Q+ E + + VN + FKP L +D ++
Sbjct: 709 VVDFKNTILIMTSNLGSQQLLEGVTPDGHIPEEVANEVNSMLKGYFKPEFLNRIDDTIL 767
>gi|322421265|ref|YP_004200488.1| ATP-dependent chaperone ClpB [Geobacter sp. M18]
gi|320127652|gb|ADW15212.1| ATP-dependent chaperone ClpB [Geobacter sp. M18]
Length = 871
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 136/247 (55%), Gaps = 27/247 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E +AEV +K TGIP + E+ +R++ RLK RV GQ++A+ ++ A+ + A
Sbjct: 535 VDAEMVAEVVAKWTGIPVNRMLETESEKLVRMEERLKSRVVGQDEALTLVANAVRR---A 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G F+F GP GK E A+A+A+ L+ D+D ++ FDM Y E ++
Sbjct: 592 RSGLSDPNRPIGSFIFLGPTGVGKTETARALASFLF---DDDQAIVRFDMSEYQEKHTVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY +VLFD+IEKA+ + N+ L+IL D R
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRRPYCIVLFDEIEKAHPEVFNVFLQIL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRV-NEVTGSL---FKPSLLKLLDKLVV 391
D N +IIMTS+L + + + T Y R+ +EV +L FKP L +D++V+
Sbjct: 707 QGRTVDFKNAVIIMTSNLGSQWIQQYGAT-DYARMQSEVMETLREAFKPEFLNRVDEIVI 765
Query: 392 IDLAVPL 398
A+PL
Sbjct: 766 YH-ALPL 771
>gi|315924574|ref|ZP_07920793.1| chaperone protein ClpB [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622104|gb|EFV02066.1| chaperone protein ClpB [Pseudoramibacter alactolyticus ATCC 23263]
Length = 866
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 163/334 (48%), Gaps = 45/334 (13%)
Query: 87 VEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHDAKRVK 146
V+ Q +KE D + + Q DN+L+ A +++Y + + K ++
Sbjct: 474 VDSVQKIKEQIDQVNHEIDMAQRDNDLEKA-----------AELKYGRLPALQNQMKTME 522
Query: 147 DYSKILDQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKK 206
D + DA+ + + V EEI E+ S TGIP S + E+ + ++ LK+
Sbjct: 523 DAA------DAKGYDDNLIRERVGEEEIGEIISNWTGIPLSKLMSGEREKLLHLEATLKE 576
Query: 207 RVFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNN 266
RV GQ++ I + +A+ + +A K +S +G FLF GP GK ELAKA+A L+D+
Sbjct: 577 RVIGQDEPIQKVTDAILRSRAGIKNPNS--PIGSFLFLGPTGVGKTELAKAVAANLFDSE 634
Query: 267 DNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKAN 314
DN ++ DM Y E S+ + L V+++PYSV+L D++EKA+
Sbjct: 635 DN---MVRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEVEKAH 691
Query: 315 SSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEV------MLTATYG 368
+ N+LL+IL D R D NT+IIMTS+L E + + + AT
Sbjct: 692 RDVFNILLQIL--DDGRVTDSQGRVVDFKNTIIIMTSNLGSEYILDGIDVDGNIKPATED 749
Query: 369 RVNEVTGSLFKPSLLKLLDKLVVIDLAVPLLDTT 402
V ++ F+P L +D++V L PL TT
Sbjct: 750 TVMKLLNQTFRPEFLNRIDEIV---LYKPLSKTT 780
>gi|25029169|ref|NP_739223.1| endopeptidase Clp ATP-binding subunit B [Corynebacterium efficiens
YS-314]
gi|54035859|sp|Q8FM94.1|CLPB_COREF RecName: Full=Chaperone protein ClpB
gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium
efficiens YS-314]
Length = 852
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 194/413 (46%), Gaps = 61/413 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAAELSH--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE---YDD---- 134
+RR +E L KE TD +SR L ++ +EL D E +S +K R Q E DD
Sbjct: 421 VRRLEIEEVALTKE-TDVASRE-RLERLRSELADE-REKLSELKARWQNEKAVIDDVRKF 477
Query: 135 ------FVSCVHDAKRVKDYSKILDQIDARVH------GKFKEKLA----------VDVE 172
S A+R DY ++ + R+ + +EK+ V E
Sbjct: 478 KEELEALRSESDIAEREGDYGRVAELRYGRIPELEKKIAEAEEKIGGADNSMLTEEVTPE 537
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IAEV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 538 VIAEVVSAWTGIPAGKMMQGETEKLLNMERFLGKRVVGQHEAVTAVSDAVRRSRAGVA-- 595
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK ELAKA++ L+ D++ ++ DM Y+E S+ +
Sbjct: 596 DPNRPTGSFLFLGPTGVGKTELAKAVSEFLF---DDERAMVRIDMSEYSEKHSVARLVGA 652
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY+ VLFD++EKA+ + ++LL++L D R
Sbjct: 653 PPGYVGYDQGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVL--DDGRLTDGQGRTV 710
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT++I+TS+L E M+ A FKP + LD +VV D
Sbjct: 711 DFRNTILILTSNLGAGGTREQMMDAVK--------MAFKPEFINRLDDIVVFD 755
>gi|404497700|ref|YP_006721806.1| ATP-dependent chaperone ClpB [Geobacter metallireducens GS-15]
gi|418067962|ref|ZP_12705288.1| ATP-dependent chaperone ClpB [Geobacter metallireducens RCH3]
gi|78195302|gb|ABB33069.1| ATP-dependent chaperone ClpB [Geobacter metallireducens GS-15]
gi|373557856|gb|EHP84236.1| ATP-dependent chaperone ClpB [Geobacter metallireducens RCH3]
Length = 864
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 137/247 (55%), Gaps = 27/247 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E +AE+ S+ TG+P S ++ + ++ RLK RV GQNDA+ ++ A+ + A
Sbjct: 536 VDGELVAEIVSRWTGVPVSRMMEGEADKLVHMEERLKTRVVGQNDALLLVANAIRR---A 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G FLF GP GK E AKA+A L+ ++D ++ DM Y E ++
Sbjct: 593 RSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLF---NDDQAIVRIDMSEYQEKHTVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L VK+RPYS+VLFD+IEKA++ + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGQLTEAVKRRPYSIVLFDEIEKAHAEVFNVLLQVL--DDGRLTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+IIMTS+L + + + + Y R+ + VT +L FKP L +D+ VV
Sbjct: 708 QGRTVDFRNTVIIMTSNLGSQWIQQYG-ASDYTRMKQMVTETLRESFKPEFLNRIDE-VV 765
Query: 392 IDLAVPL 398
I A+PL
Sbjct: 766 IYHALPL 772
>gi|320160812|ref|YP_004174036.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
gi|319994665|dbj|BAJ63436.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
Length = 861
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 66/400 (16%)
Query: 8 VKEMDNQIVSLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDIL--LKGIKRCL 65
+ E+D QI+ LE I R +Q E R+KA+ E + L LK L
Sbjct: 410 IDEVDRQILQLE-IERQALQKE------------RDKASQERLSKLEQELANLKEKSASL 456
Query: 66 NSRDKYQKELDKHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK 125
++R K +KE A+ Q VKE D + R + +N L++A +
Sbjct: 457 HARWKLEKE----------AIANLRQ-VKEQIDQTYRDIERAERENNLEEA-------AR 498
Query: 126 LRMQVEYDDFVSCVHDAK-RVKDYSKILDQIDARVHGKFKEKLAVDVEEIAEVASKLTGI 184
LR V +H+ + +VK+ K L +I KE+ VD EEIAE+ S+ TGI
Sbjct: 499 LRYGV--------LHELQNKVKEAEKRLAEIQQE-GALLKEE--VDAEEIAEIVSRWTGI 547
Query: 185 PASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLF 243
P S ++ + ++ RL +RV GQ++A+ + A+ + A+ GL R +G F+F
Sbjct: 548 PVSRLLEGEMKKLLEMEERLHQRVVGQDEAVRAVSNAIRR---ARAGLQDPNRPIGSFIF 604
Query: 244 AGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS----------- 292
GP GK ELA+A+A ++ D+++ +I DM Y E ++ +
Sbjct: 605 LGPTGVGKTELARALAEFMF---DDEHAMIRIDMSEYQEKHTVSRLIGAPPGYVGYEEGG 661
Query: 293 -LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTS 351
L V++RPYSVVLFD+IEKA+ + N+LL++L D R D N ++IMTS
Sbjct: 662 QLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQLL--DDGRLTDGQGRTVDFRNVVVIMTS 719
Query: 352 DLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+L E + + ++ V + F+P L +D++VV
Sbjct: 720 NLGSELWLSNVGQVSREQITRVLQAHFRPEFLNRIDEVVV 759
>gi|339485554|ref|YP_004700082.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
gi|338836397|gb|AEJ11202.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
Length = 831
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 483 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 540
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQN+A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 541 ELLHQRVIGQNEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 597
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 598 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 654
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 655 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 712
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + GS F+P + +D++VV +
Sbjct: 713 RAAVMDAVGSHFRPEFINRIDEVVVFE 739
>gi|405354006|ref|ZP_11023415.1| ClpB protein [Chondromyces apiculatus DSM 436]
gi|397092697|gb|EJJ23446.1| ClpB protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 874
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 196/426 (46%), Gaps = 71/426 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R A L ++ ID++ + R D ELD +
Sbjct: 360 HGVRIQDNALVAAATLSH--RYIADRFLPDKAIDLVDEASSRLRIEIDSMPTELDDVRRK 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHD 141
+ + +E E L KE HS L QI+ EL + + + ++V +D S +
Sbjct: 418 MTQLQIEREGLRKETDLHSQER--LGQIEKELANLSEKFNA-----LKVHWDAEKSAIGA 470
Query: 142 AKRVKDYSKIL--DQIDARVHG--------KF-------------KEKLA---------- 168
+ +K+ + DQ A G KF EKLA
Sbjct: 471 IRALKEKQEKAKNDQAAAERQGDLNRAAELKFGVIPSLDKELKAQNEKLAELQKNQKFLK 530
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
VD E+IAEV +K TGIP S ++ + ++ RL KRV GQ AI+ + A+ +
Sbjct: 531 EEVDAEDIAEVVAKWTGIPVSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRR-- 588
Query: 227 AAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
A+ GL R +G F+F GP GK E AKA+A L+ D+D+ ++ DM Y E S
Sbjct: 589 -ARSGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLF---DDDSAMVRIDMSEYMEKHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L V++RPY+VVLFD+IEKA+ + N+LL+IL D R
Sbjct: 645 VARLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQIL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLD 387
D NT++I+TS+L + + M T V + S F+P L +D
Sbjct: 703 DSQGRTVDFKNTVLILTSNLGSQDIQAGMAGKEELDERTREEVMDALRSHFRPEFLNRVD 762
Query: 388 KLVVID 393
++V+ +
Sbjct: 763 EVVIFE 768
>gi|397659422|ref|YP_006500124.1| clpB protein [Klebsiella oxytoca E718]
gi|394347603|gb|AFN33724.1| ClpB protein [Klebsiella oxytoca E718]
Length = 823
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 380
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 381 LDRRIIQLKLEQQALKKESDEASIK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 439
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 440 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 499
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 500 AEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 556
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 557 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 613
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 614 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 671
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 672 TVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKELVLGVVSQSFRPEFINRIDEVVV 728
>gi|338536305|ref|YP_004669639.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
gi|337262401|gb|AEI68561.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
Length = 874
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 194/424 (45%), Gaps = 67/424 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R A L ++ ID++ + R D ELD +
Sbjct: 360 HGVRIQDNALVAAATLSH--RYIADRFLPDKAIDLVDEASSRLRIEIDSMPTELDDVRRK 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHD 141
+ + +E E L KE HS L QI+ EL + E + +K+ E + +
Sbjct: 418 VTQLQIEKEGLRKETDPHSQER--LGQIEKELAN-LSEKFNALKVHWDAE-KAAIGAIRS 473
Query: 142 AKRVKDYSKILDQIDARVHG--------KF-------------KEKLA------------ 168
K ++ +K DQ A G KF EKLA
Sbjct: 474 LKEKQEKAKN-DQAAAERQGDLNRAAELKFGVIPSLDKELRAQNEKLAELQKNQKFLKEE 532
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IAEV +K TGIP S ++ + ++ RL KRV GQ AI+ + A+ + A
Sbjct: 533 VDAEDIAEVVAKWTGIPVSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRR---A 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R +G F+F GP GK E AKA+A L+ D+D+ ++ DM Y E S+
Sbjct: 590 RSGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLF---DDDSAMVRIDMSEYMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+VVLFD+IEKA+ + N+LL+IL D R
Sbjct: 647 RLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQIL--DEGRLTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++I+TS+L + + M T V + F+P L +D++
Sbjct: 705 QGRTVDFKNTVLILTSNLGSQDIQAGMAGKDELDERTRNEVMDALRGHFRPEFLNRVDEV 764
Query: 390 VVID 393
V+ +
Sbjct: 765 VIFE 768
>gi|374619251|ref|ZP_09691785.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
gi|374302478|gb|EHQ56662.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
Length = 873
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 199/412 (48%), Gaps = 53/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+R++Q R +L ++ ID++ + R D + +DK +
Sbjct: 361 HSVAITDSAIIAAARLSQ--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL--RQIDN------ELKDAFFELVSFVKLRMQVEYD 133
L + +E E + K+ T+ + + L QID +L++ + + V+ Q++ D
Sbjct: 419 LIQLKIEREAVKKDTTEAAVKQVELLDEQIDQVQREFADLEEVWTAEKAVVQGSAQIKSD 478
Query: 134 --DFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
+ A R D ++ + +I V + +++L V +E+A
Sbjct: 479 IEQAKQDLEAAHRTGDLAR-MSEIQYGVIPELEKRLEAAEGADQPEPTLLRSRVTEDEVA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP S R +R++ LK+RV GQ++A+ V+ A+ + +A GLS
Sbjct: 538 EVVSRWTGIPVSKMLEGDRSRLLRMEASLKERVVGQDEAVTVVANAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
+R G FLF GP GK EL K++A L+ D+D ++ DM + E S+ +
Sbjct: 595 KRPNGSFLFLGPTGVGKTELCKSLAEFLF---DSDQSMVRIDMSEFMEKHSVARLIGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D+IEKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSVLLLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
NT+I+MTS+L + + ++ EV G++ F+P + +D+ VV
Sbjct: 710 RNTVIVMTSNLGSDIIQDMADDDYDDMKREVMGAVAENFRPEFINRIDESVV 761
>gi|323526162|ref|YP_004228315.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407713481|ref|YP_006834046.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
gi|323383164|gb|ADX55255.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407235665|gb|AFT85864.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
Length = 865
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI+ + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHERVIGQDEAINAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ V + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMVGEPQEAVKDAVWAEVKLHFRPEFLNRIDDVVV 767
>gi|238756475|ref|ZP_04617782.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
gi|238705324|gb|EEP97734.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
Length = 857
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 196/413 (47%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALNKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLAVDVE----------------EIA 175
+ + A+RV D K+ + ++ + +++LA + EIA
Sbjct: 479 LEQAKISLEQARRVGDLGKMSELQYGKIP-ELEKQLAAATQAEGNTMKLLRNRVTETEIA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
+V ++ TGIP S ++ +R++ L KRV GQN+A++ + A+ + +A GLS
Sbjct: 538 DVLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQNEAVEAVSNAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL KA+A L+D++D ++ DM + E S+ +
Sbjct: 595 NRPIGSFLFLGPTGVGKTELCKALATFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMT----SDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMT SDL E+ E T V E+ G F+P + +D++VV
Sbjct: 710 RNTVVIMTSNLGSDLIQERFGERSYTEMKNMVMEIVGHHFRPEFINRIDEVVV 762
>gi|170718829|ref|YP_001783422.1| ATPase [Haemophilus somnus 2336]
gi|168826958|gb|ACA32329.1| ATPase AAA-2 domain protein [Haemophilus somnus 2336]
Length = 856
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 202/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDN---------ELKDAF-FELVSFVKLR-MQV 130
+ + +E + L KED D +SR + EL+D + E + + ++
Sbjct: 419 IIQLKLEQQALQKED-DEASRKRLDLLEEELGEKEREYAELEDVWKAEKAALSGAQHIKA 477
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEI 174
E D+ + A+R+ D++K+ + R+ + +++LA V EEI
Sbjct: 478 ELDNAKIQMEQARRISDFAKMSELQYGRIP-ELEKQLAQAESAEGKEMTLLRNRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +++ +R++ L KRV GQ++A+ + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKDKLLRMEQELHKRVVGQSEAVVAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +AN ++ D++N ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLANFMF---DDENAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+S + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E+ A V V G F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKELDYNAMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|167587015|ref|ZP_02379403.1| AAA ATPase, ClpB [Burkholderia ubonensis Bu]
Length = 865
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAAFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMAGSPQEEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|226939364|ref|YP_002794437.1| ClpB [Laribacter hongkongensis HLHK9]
gi|226714290|gb|ACO73428.1| ClpB [Laribacter hongkongensis HLHK9]
Length = 857
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 203/419 (48%), Gaps = 65/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D + +DK
Sbjct: 361 HGVDITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPESMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL----RMQV------- 130
+ + +E E VK++TD +S+ L I+ E+ E ++ + QV
Sbjct: 419 IIQLKIEREA-VKKETDEASQK-RLALIEEEIGKLSKEYADLDEIWKAEKAQVVGSQSIK 476
Query: 131 -EYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHG-------KFKEKL---AVDVE 172
E D S + DAKR D+ K L ++++R+ K + +L V E
Sbjct: 477 DELDKVRSQIEDAKRRGDFGKASELQYGKLPELESRLKAAEAGEGSKGQNRLLRTEVGAE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S+ TGIP S E+ + ++ L +RV GQ++A+ V+ +A+ + ++ GL
Sbjct: 537 EIAEVVSRATGIPVSKMLEGEREKLLHMEDVLHQRVVGQDEAVRVVADAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL K +A ++D+ D HLI DM Y E S+
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKTLAGFMFDSED---HLIRIDMSEYMEKHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+++MTS++ +Q+ Y+++ A +NEV G F+P + +D++VV
Sbjct: 709 VDFKNTVVVMTSNVGSQQIQSMAGDHYDLIKLAV---MNEVKG-YFRPEFINRIDEVVV 763
>gi|146312713|ref|YP_001177787.1| protein disaggregation chaperone [Enterobacter sp. 638]
gi|145319589|gb|ABP61736.1| ATPase AAA-2 domain protein [Enterobacter sp. 638]
Length = 857
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 202/419 (48%), Gaps = 66/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 415 LERRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---------QIDARVHGKFKEKLAV 169
++ E + + A+RV D Y KI + Q + + + K+
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLGRMSELQYGKIPELEKQLEFAMQSEGKTMRLLRNKV-T 532
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
DVE IA+V ++ TGIP + ++ +R++ L RV GQN+A++ + A+ + +A
Sbjct: 533 DVE-IADVLARWTGIPVARMLEGERDKLLRMEHDLHHRVIGQNEAVEAVSNAIRRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 590 -GLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 704 GRTVDFRNTVIIMTSNLGSDLIQERFGELDYGHMKDLVMGVVSHSFRPEFINRIDEVVV 762
>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 866
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 33/288 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV ++ TGIP S +E+ ++++ RL+ RV GQ++A+ + A+ + +A
Sbjct: 536 VGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRA- 594
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS +R G FLF GP GK EL KA+A L+D+ D HL+ DM + E S+
Sbjct: 595 --GLSDPKRPNGSFLFLGPTGVGKTELTKALAEFLFDSED---HLVRIDMSEFMEKHSVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPEVFNILLQVL--DDGRLTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L +++ E Y V +V F+P L +D+LV+
Sbjct: 708 QGRTVDFRNTVIVMTSNLGSDRIQEFSRKGEYDSMRVAVLDVVQDHFRPEFLNRIDELVI 767
Query: 392 ID--LAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIA 437
AV L + T + + ++ R D V+ S AL H+A
Sbjct: 768 FRPLTAVQLREITGI---QMGFLRSRLRERDMDLVL---SDGALDHLA 809
>gi|306817201|ref|ZP_07450948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
gi|304650003|gb|EFM47281.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
Length = 915
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 40/260 (15%)
Query: 161 GKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
G+ K KL VD E+IAEV + TGIP + +R++ L KR+ GQN+A+ + +
Sbjct: 476 GEDKTKLVVDAEQIAEVLAMATGIPVFKLTQAESSKLLRMEDELHKRIIGQNEAVKAVSQ 535
Query: 221 ALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNY 280
++ + +A K +R G F+FAGP GK ELAKA+A L+ ++N LI DM +
Sbjct: 536 SIRRTRAGLK--DPKRPGGSFIFAGPTGVGKTELAKALAEFLF---GDENALIQLDMSEF 590
Query: 281 TELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK-- 326
+E + F S L V+++P+SVVLFD++EKA+ I N LL++L+
Sbjct: 591 SEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEG 650
Query: 327 --TDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA-------------TYGRVN 371
TD + D NT+IIMT++L + + +LT G+V
Sbjct: 651 HLTDSQGRLV------DFKNTIIIMTTNLGTRDINKGVLTGFQASGELATDYQRMKGKVQ 704
Query: 372 EVTGSLFKPSLLKLLDKLVV 391
E F+P L +D++VV
Sbjct: 705 EELKQHFRPEFLNRVDEVVV 724
>gi|221632469|ref|YP_002521690.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
gi|221157168|gb|ACM06295.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
Length = 870
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 129/239 (53%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD ++IAE+ SK TGIP + E+ + ++ RL +RV GQ++A+ + A+ + A
Sbjct: 535 VDADDIAEIVSKWTGIPVAKLMEGEMEKLVHMEERLHERVVGQDEAVRAVSNAIRR---A 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R LG F+F GP GK ELA+A+A L+ D++ ++ DM Y E ++
Sbjct: 592 RAGLQDPNRPLGSFIFLGPTGVGKTELARALAEFLF---DDERAMVRIDMSEYQERHTVS 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVML---TATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L E + ++ Y RV + + F+P L +D++++
Sbjct: 707 QGRTVDFRNTVIIMTSNLGSEYIQALLPHREEEAYERVMQAVRAHFRPEFLNRIDEIIM 765
>gi|398795524|ref|ZP_10555375.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
gi|398206177|gb|EJM92948.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
Length = 857
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRLQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF-----------ELVSFVKLR-MQ 129
+ + +E + L KE D S + L +++EL E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASVKR--LEMLESELDQKEREYAELEEEWKAEKASLTGTQNIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---KLAVDVE-------------- 172
E + + A+RV D L Q+ +GK E +LA+ +
Sbjct: 477 AELEQARLTMEQARRVGD----LGQMSELQYGKIPELEKQLAIATQSEGKTMKLLRNRVT 532
Query: 173 --EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EIA+V ++ TGIP + ++ +R++ L RV GQN+A++ + A+ + +A
Sbjct: 533 DVEIADVLARWTGIPVARMMEGERDKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E S+
Sbjct: 590 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E + Y + E V G F+P + +D +VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQERFGSLDYAEMKEVVMTVVGQHFRPEFINRIDDMVV 762
>gi|377579335|ref|ZP_09808305.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
gi|377539445|dbj|GAB53470.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
Length = 857
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR---------MQ 129
+ + +E + L+KE + S + L ++ EL D + EL K ++
Sbjct: 419 IIQLKLEQQALLKESDEASKKR--LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E + + A+RV D Y KI + Q+ A + K + V EI
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP S E+ +R++ L +RV GQ++A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVSRMMESEREKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGDLDYSHMKDMVLTVVSQNFRPEFINRIDEVVV 762
>gi|338812538|ref|ZP_08624710.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
gi|337275468|gb|EGO63933.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
Length = 866
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R + L ++ ID++ + + D ELD+ +
Sbjct: 362 HGVRIKDAALIAAAVLSD--RYISDRFLPDKAIDLVDEAAAKLRTEIDSMPGELDEALHR 419
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELK------DAF-----FELVSFVKLR-MQ 129
+ + +E EQ + ++ D SS+ LR+I EL D+ E + ++LR ++
Sbjct: 420 VMQLEIE-EQALGKEPDPSSQE-RLRRIREELANLKAQADSLKAQWQTEKQAIMRLRDLK 477
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE----------------------KL 167
E D + + A+R D +K+ + +GK E K
Sbjct: 478 KEIDTVRTAMESAERSYDLNKLAEL----KYGKLPELEKKLKSEEASLAENRSHRVMLKE 533
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V+ ++IA + S+ TGIP + + E+ R++ L +RV GQ+ A+ + EA+ + +A
Sbjct: 534 EVNEDDIARIVSRWTGIPVTRLLSGEREKLSRLEEILHQRVVGQDAAVTAVTEAIIRARA 593
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K +R +G F+F GP GK ELAKA++ L+D+ + +I DM Y E ++
Sbjct: 594 GIK--DPQRPIGSFIFLGPTGVGKTELAKALSEVLFDD---ERSMIRIDMSEYMEKHTVS 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSV+L D++EKA+S + N+LL+IL D R
Sbjct: 649 RLVGAPPGYIGYDEGGQLTEAVRRRPYSVILLDEVEKAHSDVFNILLQIL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT++IMTS++ +++ A RV E+ F+P L +D ++V +
Sbjct: 707 KGRTVDFKNTVVIMTSNIGSQEILNGDFAAAKERVLEMMKRHFRPEFLNRIDDIIVFN 764
>gi|227876310|ref|ZP_03994423.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269976114|ref|ZP_06183113.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307701521|ref|ZP_07638539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
gi|227843083|gb|EEJ53279.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269935707|gb|EEZ92242.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307613313|gb|EFN92564.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
Length = 915
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 40/260 (15%)
Query: 161 GKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
G+ K KL VD E+IAEV + TGIP + +R++ L KR+ GQN+A+ + +
Sbjct: 476 GEDKTKLVVDAEQIAEVLAMATGIPVFKLTQAESSKLLRMEDELHKRIIGQNEAVKAVSQ 535
Query: 221 ALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNY 280
++ + +A K +R G F+FAGP GK ELAKA+A L+ ++N LI DM +
Sbjct: 536 SIRRTRAGLK--DPKRPGGSFIFAGPTGVGKTELAKALAEFLF---GDENALIQLDMSEF 590
Query: 281 TELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK-- 326
+E + F S L V+++P+SVVLFD++EKA+ I N LL++L+
Sbjct: 591 SEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEG 650
Query: 327 --TDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA-------------TYGRVN 371
TD + D NT+IIMT++L + + +LT G+V
Sbjct: 651 HLTDSQGRLV------DFKNTIIIMTTNLGTRDINKGVLTGFQASGELATDYQRMKGKVQ 704
Query: 372 EVTGSLFKPSLLKLLDKLVV 391
E F+P L +D++VV
Sbjct: 705 EELKQHFRPEFLNRVDEVVV 724
>gi|319786186|ref|YP_004145661.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
gi|317464698|gb|ADV26430.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
Length = 861
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 200/419 (47%), Gaps = 63/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE-LKDAFFELVSFVK---------LRMQVE 131
L + ++ E L KE D S + + D E L+ F +L K R++ +
Sbjct: 419 LVQLKIQREMLKKEKDDASKQRLADLEADIEKLEREFSDLNEVWKSEKAALQGATRVKEQ 478
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE------------KLAVDV---EEIAE 176
+ + A+R +DY+++ + R+ K+ KL D EEIAE
Sbjct: 479 LEQARIELEAAQRAQDYARMSEIQYGRIPALEKQLAAAAEAEKKDFKLVQDKVTEEEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S+ TGIP S ++ +R++ +L +RV GQ++AI + +A+ + +A GLS
Sbjct: 539 VVSRWTGIPVSKMLEGERDKLLRMEQQLHRRVVGQDEAIRAVSDAVRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL K +A L+D+ + ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKGLAEFLFDSAEA---MVRIDMSEFMEKHSVARLIGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYS++L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEV-----------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L Q+ E+ M A G V + F+P + LD++VV
Sbjct: 711 NTVIVMTSNLGSHQIQELSGDGSPEAYVQMKAAVMG----VVQAHFRPEFINRLDEIVV 765
>gi|69246678|ref|ZP_00604068.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium
DO]
gi|257878405|ref|ZP_05658058.1| AAA ATPase [Enterococcus faecium 1,230,933]
gi|257889396|ref|ZP_05669049.1| AAA ATPase [Enterococcus faecium 1,231,410]
gi|257894409|ref|ZP_05674062.1| AAA ATPase [Enterococcus faecium 1,231,408]
gi|260559994|ref|ZP_05832172.1| AAA ATPase [Enterococcus faecium C68]
gi|293563855|ref|ZP_06678287.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1162]
gi|314939819|ref|ZP_07847037.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a04]
gi|314941451|ref|ZP_07848341.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133C]
gi|314949622|ref|ZP_07852945.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0082]
gi|314950820|ref|ZP_07853891.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133A]
gi|314992240|ref|ZP_07857679.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133B]
gi|314995368|ref|ZP_07860473.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a01]
gi|383328854|ref|YP_005354738.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium Aus0004]
gi|389868731|ref|YP_006376154.1| S14 family endopeptidase Clp [Enterococcus faecium DO]
gi|424836338|ref|ZP_18260990.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R501]
gi|424883196|ref|ZP_18306826.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R497]
gi|424963149|ref|ZP_18377413.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1190]
gi|424972156|ref|ZP_18385531.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1139]
gi|424973174|ref|ZP_18386463.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1137]
gi|424977540|ref|ZP_18390545.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1123]
gi|424980135|ref|ZP_18392949.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV99]
gi|424984472|ref|ZP_18397004.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV69]
gi|424988733|ref|ZP_18401035.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV38]
gi|424991382|ref|ZP_18403539.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV26]
gi|424993651|ref|ZP_18405636.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV168]
gi|425006577|ref|ZP_18417749.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV1]
gi|425015056|ref|ZP_18425697.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E417]
gi|425021303|ref|ZP_18431569.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C497]
gi|425027926|ref|ZP_18435178.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C1904]
gi|425034766|ref|ZP_18439633.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 514]
gi|425045971|ref|ZP_18450027.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 510]
gi|425050278|ref|ZP_18454040.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 509]
gi|425051765|ref|ZP_18455408.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 506]
gi|425061992|ref|ZP_18465182.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 503]
gi|430830696|ref|ZP_19448752.1| chaperone ClpB [Enterococcus faecium E0333]
gi|430846057|ref|ZP_19463922.1| chaperone ClpB [Enterococcus faecium E1133]
gi|431541883|ref|ZP_19518112.1| chaperone ClpB [Enterococcus faecium E1731]
gi|431750136|ref|ZP_19538863.1| chaperone ClpB [Enterococcus faecium E2297]
gi|431754799|ref|ZP_19543459.1| chaperone ClpB [Enterococcus faecium E2883]
gi|431770796|ref|ZP_19559193.1| chaperone ClpB [Enterococcus faecium E1644]
gi|431778765|ref|ZP_19566971.1| chaperone ClpB [Enterococcus faecium E4389]
gi|431781919|ref|ZP_19570059.1| chaperone ClpB [Enterococcus faecium E6012]
gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium
DO]
gi|257812633|gb|EEV41391.1| AAA ATPase [Enterococcus faecium 1,230,933]
gi|257825756|gb|EEV52382.1| AAA ATPase [Enterococcus faecium 1,231,410]
gi|257830788|gb|EEV57395.1| AAA ATPase [Enterococcus faecium 1,231,408]
gi|260073829|gb|EEW62153.1| AAA ATPase [Enterococcus faecium C68]
gi|291604184|gb|EFF33686.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1162]
gi|313590414|gb|EFR69259.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a01]
gi|313593208|gb|EFR72053.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133B]
gi|313596996|gb|EFR75841.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133A]
gi|313599736|gb|EFR78579.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133C]
gi|313640915|gb|EFS05495.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a04]
gi|313644015|gb|EFS08595.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0082]
gi|378938548|gb|AFC63620.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium Aus0004]
gi|388533980|gb|AFK59172.1| S14 family endopeptidase Clp [Enterococcus faecium DO]
gi|402920977|gb|EJX41450.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R501]
gi|402934089|gb|EJX53480.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R497]
gi|402950151|gb|EJX68163.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1190]
gi|402955878|gb|EJX73377.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1139]
gi|402959213|gb|EJX76487.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1137]
gi|402965540|gb|EJX82246.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1123]
gi|402967236|gb|EJX83808.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV99]
gi|402968757|gb|EJX85221.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV69]
gi|402971013|gb|EJX87318.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV38]
gi|402976856|gb|EJX92710.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV26]
gi|402982175|gb|EJX97656.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV168]
gi|402996833|gb|EJY11194.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E417]
gi|402997109|gb|EJY11459.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV1]
gi|403004998|gb|EJY18749.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C1904]
gi|403007218|gb|EJY20809.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C497]
gi|403019449|gb|EJY32052.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 514]
gi|403024224|gb|EJY36398.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 509]
gi|403025856|gb|EJY37900.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 510]
gi|403036856|gb|EJY48194.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 506]
gi|403039857|gb|EJY50975.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 503]
gi|430482285|gb|ELA59403.1| chaperone ClpB [Enterococcus faecium E0333]
gi|430539877|gb|ELA80116.1| chaperone ClpB [Enterococcus faecium E1133]
gi|430592930|gb|ELB30917.1| chaperone ClpB [Enterococcus faecium E1731]
gi|430610609|gb|ELB47753.1| chaperone ClpB [Enterococcus faecium E2297]
gi|430618627|gb|ELB55468.1| chaperone ClpB [Enterococcus faecium E2883]
gi|430634687|gb|ELB70801.1| chaperone ClpB [Enterococcus faecium E1644]
gi|430643426|gb|ELB79165.1| chaperone ClpB [Enterococcus faecium E4389]
gi|430648320|gb|ELB83727.1| chaperone ClpB [Enterococcus faecium E6012]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|312135307|ref|YP_004002645.1| ATP-dependent chaperone clpb [Caldicellulosiruptor owensensis OL]
gi|311775358|gb|ADQ04845.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor owensensis OL]
Length = 864
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L KRV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHKRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 -DPRKPIGTFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G ++E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIDEETRKLIDRELKLNFRPEFLNRLDEIII 769
>gi|257887256|ref|ZP_05666909.1| AAA ATPase [Enterococcus faecium 1,141,733]
gi|257823310|gb|EEV50242.1| AAA ATPase [Enterococcus faecium 1,141,733]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|331269758|ref|YP_004396250.1| ATPase AAA-2 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329126308|gb|AEB76253.1| ATPase AAA-2 domain protein [Clostridium botulinum BKT015925]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 197/426 (46%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R + ++ ID++ + + D ELD
Sbjct: 369 HGVRIHDSAIVAAAKLSH--RYIQDRYMPDKAIDLIDEAGAMIRSEIDSLPTELD----M 422
Query: 82 LRRAVV----EYEQLVKEDTDHSSRSFW--------LRQIDNELKDAF-FELVSFVKLR- 127
+RR + E E L KE+ + S + L++ +NE+ + E +++R
Sbjct: 423 IRRKQLMLETEKEALTKENDEASKKRLEILEKELAELKEKNNEMTAKYEKEKAHILEVRD 482
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVD 170
++ E D+ + A+R D +K+ + +++ +V K K+ K V
Sbjct: 483 LKTELDEARGDLEKAERDYDLNKVAELKYGTIPELERKVQEKEKDMEKNYEGALLKEEVT 542
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EI+E+ SK TGIP + ++ +R++ LKKRV GQ++A + A+ + +A K
Sbjct: 543 ESEISEIVSKWTGIPVTRLVEGERQKLLRLEDELKKRVIGQDEATVAVSNAVIRARAGLK 602
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
RR +G F+F GP GK ELAK +A L+DN DN +I DM Y E ++
Sbjct: 603 --DERRPIGSFIFLGPTGVGKTELAKTLARNLFDNEDN---IIRIDMSEYMEKHAVSRLI 657
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
L V++ PYSV+LFD+IEKAN + N+ L+IL D R
Sbjct: 658 GPPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQIL--DDGRLTDNKGK 715
Query: 339 AFDLTNTLIIMTSDLK-------------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+IIMTS+L DE++ E ++ R FKP L
Sbjct: 716 TVDFKNTIIIMTSNLGSSYLLENKKEDSIDEKIREEVMNTLKLR--------FKPEFLNR 767
Query: 386 LDKLVV 391
+D +++
Sbjct: 768 IDDIIL 773
>gi|415888115|ref|ZP_11549051.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4453]
gi|416134154|ref|ZP_11598210.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4452]
gi|431294054|ref|ZP_19506928.1| chaperone ClpB [Enterococcus faecium E1626]
gi|364092666|gb|EHM35014.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4452]
gi|364094972|gb|EHM37078.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4453]
gi|430581647|gb|ELB20086.1| chaperone ClpB [Enterococcus faecium E1626]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|261207870|ref|ZP_05922555.1| AAA ATPase [Enterococcus faecium TC 6]
gi|289566614|ref|ZP_06447034.1| ATP-dependent chaperone ClpB [Enterococcus faecium D344SRF]
gi|294619343|ref|ZP_06698807.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1679]
gi|294623272|ref|ZP_06702137.1| ATP-dependent chaperone ClpB [Enterococcus faecium U0317]
gi|406580943|ref|ZP_11056128.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD4E]
gi|406583142|ref|ZP_11058233.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD3E]
gi|406585530|ref|ZP_11060517.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD2E]
gi|410937182|ref|ZP_11369043.1| S14 family endopeptidase Clp [Enterococcus sp. GMD5E]
gi|424792413|ref|ZP_18218650.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium V689]
gi|424802674|ref|ZP_18228151.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium S447]
gi|424859590|ref|ZP_18283581.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R499]
gi|424950760|ref|ZP_18365909.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R496]
gi|424953535|ref|ZP_18368487.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R494]
gi|424955626|ref|ZP_18370452.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R446]
gi|424960430|ref|ZP_18374945.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1986]
gi|424966994|ref|ZP_18380735.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1140]
gi|424996928|ref|ZP_18408712.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV165]
gi|425000782|ref|ZP_18412330.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV161]
gi|425005284|ref|ZP_18416542.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV102]
gi|425012317|ref|ZP_18423141.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E422]
gi|425016766|ref|ZP_18427311.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C621]
gi|425032054|ref|ZP_18437142.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 515]
gi|425038469|ref|ZP_18443085.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 513]
gi|425041849|ref|ZP_18446229.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 511]
gi|425056077|ref|ZP_18459537.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 505]
gi|427396161|ref|ZP_18888920.1| chaperone ClpB [Enterococcus durans FB129-CNAB-4]
gi|430844057|ref|ZP_19461955.1| chaperone ClpB [Enterococcus faecium E1050]
gi|430851649|ref|ZP_19469384.1| chaperone ClpB [Enterococcus faecium E1258]
gi|430854796|ref|ZP_19472508.1| chaperone ClpB [Enterococcus faecium E1392]
gi|430860185|ref|ZP_19477789.1| chaperone ClpB [Enterococcus faecium E1573]
gi|430949860|ref|ZP_19486083.1| chaperone ClpB [Enterococcus faecium E1576]
gi|431006665|ref|ZP_19489130.1| chaperone ClpB [Enterococcus faecium E1578]
gi|431032955|ref|ZP_19490801.1| chaperone ClpB [Enterococcus faecium E1590]
gi|431229764|ref|ZP_19501967.1| chaperone ClpB [Enterococcus faecium E1622]
gi|431253130|ref|ZP_19504456.1| chaperone ClpB [Enterococcus faecium E1623]
gi|431661126|ref|ZP_19523938.1| chaperone ClpB [Enterococcus faecium E1904]
gi|431767174|ref|ZP_19555629.1| chaperone ClpB [Enterococcus faecium E1321]
gi|431772254|ref|ZP_19560596.1| chaperone ClpB [Enterococcus faecium E2369]
gi|431775806|ref|ZP_19564076.1| chaperone ClpB [Enterococcus faecium E2560]
gi|431785704|ref|ZP_19573727.1| chaperone ClpB [Enterococcus faecium E6045]
gi|447912591|ref|YP_007394003.1| ClpB protein [Enterococcus faecium NRRL B-2354]
gi|260078253|gb|EEW65959.1| AAA ATPase [Enterococcus faecium TC 6]
gi|289161604|gb|EFD09484.1| ATP-dependent chaperone ClpB [Enterococcus faecium D344SRF]
gi|291594392|gb|EFF25805.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1679]
gi|291597300|gb|EFF28486.1| ATP-dependent chaperone ClpB [Enterococcus faecium U0317]
gi|402917692|gb|EJX38446.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium V689]
gi|402919393|gb|EJX39999.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium S447]
gi|402926253|gb|EJX46304.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R499]
gi|402932558|gb|EJX52057.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R496]
gi|402938740|gb|EJX57721.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R494]
gi|402947708|gb|EJX65900.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1986]
gi|402948275|gb|EJX66428.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R446]
gi|402955261|gb|EJX72803.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1140]
gi|402986687|gb|EJY01799.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV102]
gi|402987462|gb|EJY02524.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV165]
gi|402988520|gb|EJY03523.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV161]
gi|402993774|gb|EJY08362.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E422]
gi|403006206|gb|EJY19870.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C621]
gi|403014034|gb|EJY27054.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 515]
gi|403019574|gb|EJY32170.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 513]
gi|403025348|gb|EJY37434.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 511]
gi|403032476|gb|EJY44030.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 505]
gi|404453319|gb|EKA00384.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD4E]
gi|404457117|gb|EKA03691.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD3E]
gi|404462545|gb|EKA08277.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD2E]
gi|410734293|gb|EKQ76213.1| S14 family endopeptidase Clp [Enterococcus sp. GMD5E]
gi|425722831|gb|EKU85722.1| chaperone ClpB [Enterococcus durans FB129-CNAB-4]
gi|430496647|gb|ELA72706.1| chaperone ClpB [Enterococcus faecium E1050]
gi|430542231|gb|ELA82339.1| chaperone ClpB [Enterococcus faecium E1258]
gi|430547675|gb|ELA87591.1| chaperone ClpB [Enterococcus faecium E1392]
gi|430552622|gb|ELA92350.1| chaperone ClpB [Enterococcus faecium E1573]
gi|430557714|gb|ELA97160.1| chaperone ClpB [Enterococcus faecium E1576]
gi|430561201|gb|ELB00478.1| chaperone ClpB [Enterococcus faecium E1578]
gi|430564056|gb|ELB03240.1| chaperone ClpB [Enterococcus faecium E1590]
gi|430573750|gb|ELB12528.1| chaperone ClpB [Enterococcus faecium E1622]
gi|430578218|gb|ELB16788.1| chaperone ClpB [Enterococcus faecium E1623]
gi|430600246|gb|ELB37900.1| chaperone ClpB [Enterococcus faecium E1904]
gi|430631182|gb|ELB67505.1| chaperone ClpB [Enterococcus faecium E1321]
gi|430638118|gb|ELB74095.1| chaperone ClpB [Enterococcus faecium E2369]
gi|430642454|gb|ELB78232.1| chaperone ClpB [Enterococcus faecium E2560]
gi|430646863|gb|ELB82324.1| chaperone ClpB [Enterococcus faecium E6045]
gi|445188300|gb|AGE29942.1| ClpB protein [Enterococcus faecium NRRL B-2354]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|227551605|ref|ZP_03981654.1| S14 family endopeptidase Clp [Enterococcus faecium TX1330]
gi|257884473|ref|ZP_05664126.1| AAA ATPase [Enterococcus faecium 1,231,501]
gi|257895792|ref|ZP_05675445.1| AAA ATPase [Enterococcus faecium Com12]
gi|257898362|ref|ZP_05678015.1| AAA ATPase [Enterococcus faecium Com15]
gi|293377592|ref|ZP_06623781.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium PC4.1]
gi|293571788|ref|ZP_06682804.1| ATP-dependent chaperone ClpB [Enterococcus faecium E980]
gi|430841365|ref|ZP_19459284.1| chaperone ClpB [Enterococcus faecium E1007]
gi|431071617|ref|ZP_19494588.1| chaperone ClpB [Enterococcus faecium E1604]
gi|431106063|ref|ZP_19497220.1| chaperone ClpB [Enterococcus faecium E1613]
gi|431737614|ref|ZP_19526567.1| chaperone ClpB [Enterococcus faecium E1972]
gi|431740044|ref|ZP_19528963.1| chaperone ClpB [Enterococcus faecium E2039]
gi|227179282|gb|EEI60254.1| S14 family endopeptidase Clp [Enterococcus faecium TX1330]
gi|257820311|gb|EEV47459.1| AAA ATPase [Enterococcus faecium 1,231,501]
gi|257832357|gb|EEV58778.1| AAA ATPase [Enterococcus faecium Com12]
gi|257836274|gb|EEV61348.1| AAA ATPase [Enterococcus faecium Com15]
gi|291608042|gb|EFF37348.1| ATP-dependent chaperone ClpB [Enterococcus faecium E980]
gi|292643592|gb|EFF61713.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium PC4.1]
gi|430494141|gb|ELA70391.1| chaperone ClpB [Enterococcus faecium E1007]
gi|430567250|gb|ELB06336.1| chaperone ClpB [Enterococcus faecium E1604]
gi|430569595|gb|ELB08585.1| chaperone ClpB [Enterococcus faecium E1613]
gi|430598701|gb|ELB36436.1| chaperone ClpB [Enterococcus faecium E1972]
gi|430604171|gb|ELB41671.1| chaperone ClpB [Enterococcus faecium E2039]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|431585951|ref|ZP_19520466.1| chaperone ClpB [Enterococcus faecium E1861]
gi|430593129|gb|ELB31115.1| chaperone ClpB [Enterococcus faecium E1861]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|431412436|ref|ZP_19511871.1| chaperone ClpB [Enterococcus faecium E1630]
gi|431743147|ref|ZP_19532028.1| chaperone ClpB [Enterococcus faecium E2071]
gi|431759324|ref|ZP_19547938.1| chaperone ClpB [Enterococcus faecium E3346]
gi|430589391|gb|ELB27519.1| chaperone ClpB [Enterococcus faecium E1630]
gi|430607511|gb|ELB44831.1| chaperone ClpB [Enterococcus faecium E2071]
gi|430626124|gb|ELB62710.1| chaperone ClpB [Enterococcus faecium E3346]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|431756787|ref|ZP_19545419.1| chaperone ClpB [Enterococcus faecium E3083]
gi|431762013|ref|ZP_19550575.1| chaperone ClpB [Enterococcus faecium E3548]
gi|430620641|gb|ELB57443.1| chaperone ClpB [Enterococcus faecium E3083]
gi|430624705|gb|ELB61355.1| chaperone ClpB [Enterococcus faecium E3548]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|293568999|ref|ZP_06680312.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1071]
gi|291588432|gb|EFF20267.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1071]
Length = 869
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|293556232|ref|ZP_06674822.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1039]
gi|294615628|ref|ZP_06695483.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1636]
gi|425057913|ref|ZP_18461310.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 504]
gi|430825471|ref|ZP_19443675.1| chaperone ClpB [Enterococcus faecium E0164]
gi|430827600|ref|ZP_19445733.1| chaperone ClpB [Enterococcus faecium E0269]
gi|430835825|ref|ZP_19453811.1| chaperone ClpB [Enterococcus faecium E0680]
gi|430849709|ref|ZP_19467482.1| chaperone ClpB [Enterococcus faecium E1185]
gi|430871222|ref|ZP_19483645.1| chaperone ClpB [Enterococcus faecium E1575]
gi|431145494|ref|ZP_19499020.1| chaperone ClpB [Enterococcus faecium E1620]
gi|431497724|ref|ZP_19514878.1| chaperone ClpB [Enterococcus faecium E1634]
gi|431746158|ref|ZP_19534992.1| chaperone ClpB [Enterococcus faecium E2134]
gi|431764088|ref|ZP_19552631.1| chaperone ClpB [Enterococcus faecium E4215]
gi|291591457|gb|EFF23111.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1636]
gi|291601651|gb|EFF31913.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1039]
gi|403039488|gb|EJY50632.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 504]
gi|430445936|gb|ELA55635.1| chaperone ClpB [Enterococcus faecium E0164]
gi|430484460|gb|ELA61475.1| chaperone ClpB [Enterococcus faecium E0269]
gi|430488939|gb|ELA65579.1| chaperone ClpB [Enterococcus faecium E0680]
gi|430537460|gb|ELA77803.1| chaperone ClpB [Enterococcus faecium E1185]
gi|430558179|gb|ELA97606.1| chaperone ClpB [Enterococcus faecium E1575]
gi|430575941|gb|ELB14634.1| chaperone ClpB [Enterococcus faecium E1620]
gi|430588659|gb|ELB26851.1| chaperone ClpB [Enterococcus faecium E1634]
gi|430608927|gb|ELB46133.1| chaperone ClpB [Enterococcus faecium E2134]
gi|430631273|gb|ELB67595.1| chaperone ClpB [Enterococcus faecium E4215]
Length = 869
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|170692320|ref|ZP_02883483.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
gi|170142750|gb|EDT10915.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
Length = 865
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLQIEDKLHERVIGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ V + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMVGEPQEAVKDAVWTEVKLHFRPEFLNRIDDVVV 767
>gi|91783442|ref|YP_558648.1| heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385209766|ref|ZP_10036634.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
gi|91687396|gb|ABE30596.1| Heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385182104|gb|EIF31380.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
Length = 865
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHARVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A+ L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALASFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ A V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMVGEPQEAVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|336124918|ref|YP_004566966.1| ClpV protein [Vibrio anguillarum 775]
gi|335342641|gb|AEH33924.1| ClpV protein [Vibrio anguillarum 775]
Length = 863
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 197/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 366 HHVEITDPAIVAAASLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELK---DAFFEL-------------VSFVK 125
+ + +E + L E + S + L+ ++ ELK F EL +K
Sbjct: 424 IIQLKIEQQALTNEHDEASEK--RLQVLNEELKVKEREFAELEEVWNAEKAALSGTQHIK 481
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKEKL-----AVDVEE 173
+ Q D DF D R+ + Y +I + Q+D + +E DVE
Sbjct: 482 SELEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNNVTDVE- 540
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV SK TGIP S +E+ ++++ L +RV GQ +A++V+ A+ + +A GLS
Sbjct: 541 IAEVLSKQTGIPVSKMLEAEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRA---GLS 597
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+ +
Sbjct: 598 DPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSED---AMVRIDMSEFMEKHSVARLVGA 654
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L ++++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 655 PPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 712
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L Q+ E + Y V E+ G F+P L +D+ VV
Sbjct: 713 DFRNTVVIMTSNLGSSQIQEKFASLDYEGIKKEVMEIVGKHFRPEFLNRVDESVV 767
>gi|257882823|ref|ZP_05662476.1| AAA ATPase [Enterococcus faecium 1,231,502]
gi|257818481|gb|EEV45809.1| AAA ATPase [Enterococcus faecium 1,231,502]
Length = 869
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|189485561|ref|YP_001956502.1| chaperone ClpB [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287520|dbj|BAG14041.1| chaperone ClpB [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 869
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 205/425 (48%), Gaps = 78/425 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R L ++ ID++ + + D ELD ++
Sbjct: 366 HGVKIKDSALVAAATLS--ARYIMDRYLPDKAIDLVDESASKLRIEIDSMPAELDSVEHR 423
Query: 82 LRRAVVEYEQLVKEDTDHSSR---SFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
LR+ VE Q VK++TD +S+ + ++ID +D+ M+V+++ S
Sbjct: 424 LRQIEVE-RQAVKKETDAASKERLANMEKEIDKLKRDS---------AEMKVQWEKEKSS 473
Query: 139 VHDAKRVK---DYSKILDQIDAR----------VHGKFKE-------------------- 165
+ + +R+K + KI +Q R +GK +
Sbjct: 474 ISEIRRLKAEIENMKIEEQKAERNGDLNAVAEIRYGKIPQAQKQLEEENKKLLKQQKEKK 533
Query: 166 --KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
K VD E+IA V SK TGIP + ++ ++++ +L RV GQ++AI I A+
Sbjct: 534 MLKEEVDEEDIAVVVSKWTGIPVTRMMESEMQKLLKMEDKLHGRVIGQDEAISAIANAVR 593
Query: 224 KPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ ++ GLS R +G FLF GP GK ELAKA+A L+D+ N ++ DM Y E
Sbjct: 594 R---SRSGLSDPNRPIGSFLFLGPTGVGKTELAKALAELLFDDEKN---IVRIDMSEYME 647
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ F + L V++RPY +VLFD++EKAN + N++L++ D
Sbjct: 648 KHSVSRFIGAPPGYVGFEEGGQLTEAVRRRPYCIVLFDEVEKANREVFNVMLQLF-DDGR 706
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRV-NEVTGSL---FKPSLLKLL 386
RG D NT+IIMTS++ + + E + Y + N+V L F+P L +
Sbjct: 707 LTDGRG-KTVDFKNTVIIMTSNIGSQHIQE---SENYDEMKNKVMQELRNYFRPEFLNRI 762
Query: 387 DKLVV 391
D++++
Sbjct: 763 DEIII 767
>gi|284990567|ref|YP_003409121.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284063812|gb|ADB74750.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 847
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 156/327 (47%), Gaps = 53/327 (16%)
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKILDQI--------DARVHGKFKEKLAVDVEEIAEVA 178
R+Q E D V+ A++ + S++ DQ+ AR G V VE+IAEV
Sbjct: 455 RLQREKDQAVA----AEQYERASELRDQLAEAQARLEQARSGGGQPGVPEVGVEDIAEVV 510
Query: 179 SKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR-RQ 237
S+ TGIP S + +R + ++ L +RV GQ+DA+ V+ EA+ + ++ GL R
Sbjct: 511 SRSTGIPVSQLTQEEVQRLLGLEDHLHQRVVGQDDAVRVVAEAVRR---SRVGLGDPDRP 567
Query: 238 LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS----- 292
+G FLF GP GK ELA+A+A L+ + D +I DM + E ++ S
Sbjct: 568 IGSFLFLGPTGVGKTELARALAEALFGDED---RMIRLDMSEFQERHTVSRLVGSPPGYV 624
Query: 293 -------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNT 345
L V++RPYSVVL D+IEKA+ + N LL++L D R D NT
Sbjct: 625 GYEDAGQLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQVL--DDGRLTDSQGRTVDFKNT 682
Query: 346 LIIMTSDLKDEQVYEVMLTATYGRVNEVTG-------------SLFKPSLLKLLDKLVVI 392
++IMTS+L E + +G N F+P L +D++VV
Sbjct: 683 VLIMTSNLGSELIQGRNTPLGFGAGNAAASDDGLRERLLRRLREQFRPEFLNRVDEIVVF 742
Query: 393 DL--AVPLLDTTRLLLREWACEETKRR 417
L TRLLL +ET+RR
Sbjct: 743 QQLETEQLAQITRLLL-----DETRRR 764
>gi|209519546|ref|ZP_03268339.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
gi|209500025|gb|EEA00088.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
Length = 865
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI+ + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIESKLHERVVGQDEAINAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ A V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMVGEPQEAVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|157165320|ref|YP_001466745.1| chaperone ClpB 1 [Campylobacter concisus 13826]
gi|112799976|gb|EAT97320.1| chaperone ClpB 1 [Campylobacter concisus 13826]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 192/423 (45%), Gaps = 63/423 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H + I D AL A+R++ R A L ++ ID++ + + EL K
Sbjct: 357 LEVHHGITITDSALVAAARLSD--RYIANRFLPDKAIDLIDEAAAELKMQIESEPYELSK 414
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELV 121
K + VE E L ED D + L +I+ E+ D A F +
Sbjct: 415 IKREIVTLQVEKEALKMEDADKNKER--LGEIEKEIADLNEKKLALDTKFENEKAVFGGI 472
Query: 122 SFVKLRMQVEYDDFVSCVHDAKRVKD--------YSKILD------QIDARVHGKFKE-- 165
S + E D S AKR D Y KI D +++ + KE
Sbjct: 473 S----KATKEIDSLKSQAEIAKRNGDLQKAAEIEYGKIADAKKHKHELEEKWEHMKKEGV 528
Query: 166 --KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
K VD E +AE+ SK TGI T +E+Y+R++ L++ V GQ+DA+ + A+
Sbjct: 529 LLKNQVDEELVAEILSKWTGISVKKMLTSEKEKYLRIEEHLRESVVGQDDALHALARAVK 588
Query: 224 KPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ KA GL+ +R +G FLF GP GK + AKA+A L+ D++ LI FDM Y E
Sbjct: 589 RNKA---GLNEGQRPIGSFLFLGPTGVGKTQSAKALAKFLF---DDEKALIRFDMSEYME 642
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ + L V++RPYSV+LFD++EKA+ + N+LL IL D
Sbjct: 643 KHSVSRLLGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEVEKAHKDVFNILLGIL--DDG 700
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
R D NT+II+TS++ + E+ V + FKP L LD +
Sbjct: 701 RATDNKGVTVDFKNTIIILTSNIASNFIMELKGEDRDVAVKNELKNYFKPEFLNRLDDTI 760
Query: 391 VID 393
+ +
Sbjct: 761 IFN 763
>gi|430822510|ref|ZP_19441088.1| chaperone ClpB [Enterococcus faecium E0120]
gi|430865070|ref|ZP_19480828.1| chaperone ClpB [Enterococcus faecium E1574]
gi|430443087|gb|ELA53084.1| chaperone ClpB [Enterococcus faecium E0120]
gi|430553148|gb|ELA92849.1| chaperone ClpB [Enterococcus faecium E1574]
Length = 869
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|320451090|ref|YP_004203186.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
gi|320151259|gb|ADW22637.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
Length = 861
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 30/260 (11%)
Query: 166 KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
+L V E+IAE+ S+ TGIP S E+ +R++ L KRV GQ +AI + +A+ +
Sbjct: 525 RLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEDELHKRVVGQEEAIRAVADAIRRA 584
Query: 226 KAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
+A K R +G FLF GP GK ELAK +A L+D + ++ DM Y E +
Sbjct: 585 RAGLK--DPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEA---MVRIDMTEYMEKHA 639
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L V++RPY+V+LFD+IEKA+ + N+LL+IL D R
Sbjct: 640 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNILLQIL--DDGRLT 697
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGRVNE----VTGSLFKPSLLKLLDK 388
D NT+II+TS+L + E + Y R+ E V F+P L LD+
Sbjct: 698 DSHGRTVDFRNTVIILTSNLGSPLILEGIQKGLPYERIREEVFAVLQKHFRPEFLNRLDE 757
Query: 389 LVVIDLAVPLLDTTRLLLRE 408
+VV PL TR LRE
Sbjct: 758 IVVFR---PL---TREQLRE 771
>gi|53723604|ref|YP_103036.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|67639679|ref|ZP_00438519.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|121598639|ref|YP_993186.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124385885|ref|YP_001026039.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10229]
gi|126448469|ref|YP_001080692.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10247]
gi|167003461|ref|ZP_02269247.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
gi|254178097|ref|ZP_04884752.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|254206315|ref|ZP_04912667.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|254358273|ref|ZP_04974546.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|52427027|gb|AAU47620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|121227449|gb|ABM49967.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124293905|gb|ABN03174.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10229]
gi|126241339|gb|ABO04432.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10247]
gi|147753758|gb|EDK60823.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|148027400|gb|EDK85421.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|160699136|gb|EDP89106.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|238520268|gb|EEP83730.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|243061022|gb|EES43208.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
Length = 865
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 196/420 (46%), Gaps = 63/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D +E+DK
Sbjct: 361 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I+ E++ E ++ +++
Sbjct: 419 LIQLKIEREAVKKEPDEASQKRLAL--IEEEIERLGREYADLDEIWTAEKAAVQGSAQLK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARV-----------HGKFKEKL---A 168
E D + + +R K+ L Q++AR+ H + +L
Sbjct: 477 EEIDKVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQ 536
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M ++ + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGSSQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|320157323|ref|YP_004189702.1| ClpB protein [Vibrio vulnificus MO6-24/O]
gi|319932635|gb|ADV87499.1| ClpB protein [Vibrio vulnificus MO6-24/O]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 196/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL------------------ 120
+ + +E + L E + S + LR ++ EL + F EL
Sbjct: 419 IIQLKIEQQALSNEHDEASEK--RLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIK 476
Query: 121 VSFVKLRMQVEYDDFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDV 171
+ + RM +E F D R+ + Y +I + Q+D + +E K V
Sbjct: 477 AALEQARMDME---FARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A G
Sbjct: 534 NEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y +V EV F+P L +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFLNRVDETVV 762
>gi|27363946|ref|NP_759474.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
gi|54035847|sp|Q8DEV2.1|CLPB_VIBVU RecName: Full=Chaperone protein ClpB
gi|27360063|gb|AAO09001.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 196/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL------------------ 120
+ + +E + L E + S + LR ++ EL + F EL
Sbjct: 419 IIQLKIEQQALSNEHDEASEK--RLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIK 476
Query: 121 VSFVKLRMQVEYDDFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDV 171
+ + RM +E F D R+ + Y +I + Q+D + +E K V
Sbjct: 477 AALEQARMDME---FARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A G
Sbjct: 534 NEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y +V EV F+P L +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFLNRVDETVV 762
>gi|238790743|ref|ZP_04634504.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
gi|238721184|gb|EEQ12863.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALKKESDDASKKRLEMLETELEQKEREYSELEEEWKAEKASLTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLA--VDVEEIAE 176
+ + A+RV D Y KI + Q+ A + GK + L V EIAE
Sbjct: 479 LEQAKITLEQARRVGDLARMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEAEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP S ++ +R++ L KRV GQN+A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQNEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMT----SDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMT SDL E+ E T V +V F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYTEMKNMVMDVVTHHFRPEFINRIDEVVV 762
>gi|182418409|ref|ZP_02949703.1| ATP-dependent chaperone ClpB [Clostridium butyricum 5521]
gi|237666871|ref|ZP_04526856.1| ATP-dependent chaperone ClpB [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377791|gb|EDT75335.1| ATP-dependent chaperone ClpB [Clostridium butyricum 5521]
gi|237658070|gb|EEP55625.1| ATP-dependent chaperone ClpB [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 871
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 221/480 (46%), Gaps = 68/480 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R + ++ ID++ + + D ELD +
Sbjct: 364 HGIRIHDSAIVAAAKLSD--RYIQDRYMPDKAIDLIDEAGAMIRSEIDSLPTELDIVRRK 421
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW--------LRQIDNELKDAFFE----LVSFVKLRMQ 129
+ + +E E L KE + S + L++ ++E+ + + + S L+ Q
Sbjct: 422 IFKLEIEKEALSKEKDEGSKKRLSDVEKELAELKEKNDEMTAKYTKEKENITSIKTLKSQ 481
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD---QIDARVHGKFKEKLA--------------VDVE 172
+ D+ + +A+R DY+K+ + + ++ + K K A V E
Sbjct: 482 L--DEARGKIEEAQRNFDYNKVAEIQYSVIPKIEEEIKAKEAFTKENYEGALLKEEVTEE 539
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+++V +K TGIP S E+ +R++ + KRV GQ +A++ + A+ + +A K +
Sbjct: 540 EVSQVLAKWTGIPVSRLLEGEREKLLRLEEDMSKRVIGQGEAVETVTNAILRARAGLKDV 599
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ R +G F+F GP GK ELAK +A L+D+ +N +I DM Y E S+ +
Sbjct: 600 N--RPIGSFIFLGPTGVGKTELAKTLARNLFDSEEN---IIRIDMSEYMEKHSVSRLVGA 654
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++ PYSV+LFD+IEKA+ + N+ L+IL D R
Sbjct: 655 PPGYVGYDEGGQLTEAVRRNPYSVILFDEIEKAHEDVFNIFLQIL--DDGRLTDNKGKTV 712
Query: 341 DLTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLA 395
D NT+IIMTS++ E + E + +V + S FKP L +D +++
Sbjct: 713 DFKNTIIIMTSNIGSEYLLENKNEDHVEDEIKSKVMTILKSRFKPEFLNRVDDIIMFK-- 770
Query: 396 VPLLDTTRLLLREWACEETKRRNNDSKAVI-VCPSTSALV-------HIASNAARKYGQN 447
PL ++ + + ++ RR D +I V L+ H + ++Y QN
Sbjct: 771 -PLTESGIKKIIDIFLKDVARRLKDKNIIIEVTDEAETLMAREGYDPHYGARPLKRYIQN 829
>gi|120553812|ref|YP_958163.1| ATPase [Marinobacter aquaeolei VT8]
gi|120323661|gb|ABM17976.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
Length = 859
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 200/419 (47%), Gaps = 66/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +++ D A+ A++++ R +L ++ ID++ + + D + LD+ +
Sbjct: 361 HGVEVTDGAIIAAAKLSH--RYITDRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR------SFWLRQIDNELKD-------AFFELVSFVKLRM 128
L + +E E L KE TD +S+ S + ++ E D L K++
Sbjct: 419 LIQLKIEREALKKE-TDAASKKRLEELSAVIGNVEREYADLEEVWNTEKAALHGSQKIKS 477
Query: 129 QVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEE 173
Q+E + +A+R D Y KI + Q+D + E + V EE
Sbjct: 478 QLEQARI--DLENARRAGDLGKMSELQYGKIPELERQLDMASQAEMMEMKLLRNRVTDEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAE+ SK TGIP S ++ MR++ L RV GQ++A++ + A+ + +A GLS
Sbjct: 536 IAEIVSKWTGIPVSKMLEGERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+AN L+ D + ++ DM + E S+ +
Sbjct: 593 DPNRPNGSFLFLGPTGVGKTELCKALANFLF---DTEEAMVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+++MTS+L E+ YE M +A V EV GS F+P + +D++VV
Sbjct: 708 DFRNTVVVMTSNLGSHIIQEKAGEENYEDMKSA----VMEVVGSHFRPEFINRVDEVVV 762
>gi|76812125|ref|YP_333784.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|167738226|ref|ZP_02411000.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 14]
gi|167902362|ref|ZP_02489567.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei NCTC 13177]
gi|167910600|ref|ZP_02497691.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 112]
gi|254261495|ref|ZP_04952549.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|254297398|ref|ZP_04964851.1| clpB protein [Burkholderia pseudomallei 406e]
gi|386861504|ref|YP_006274453.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
gi|418533774|ref|ZP_13099633.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|418540647|ref|ZP_13106174.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|418546892|ref|ZP_13112080.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|76581578|gb|ABA51053.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|157807919|gb|EDO85089.1| clpB protein [Burkholderia pseudomallei 406e]
gi|254220184|gb|EET09568.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|385360734|gb|EIF66648.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|385361021|gb|EIF66923.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|385362820|gb|EIF68618.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|385658632|gb|AFI66055.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
Length = 865
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 196/420 (46%), Gaps = 63/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D +E+DK
Sbjct: 361 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I+ E++ E ++ +++
Sbjct: 419 LIQLKIEREAVKKEPDEASQKRLAL--IEEEIERLGREYADLDEIWTAEKAAVQGSAQLK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARV-----------HGKFKEKL---A 168
E D + + +R K+ L Q++AR+ H + +L
Sbjct: 477 EEIDKVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQ 536
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M ++ + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGSSQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|113460345|ref|YP_718406.1| ATP-dependent Clp protease subunit B [Haemophilus somnus 129PT]
gi|112822388|gb|ABI24477.1| ATP-dependent Clp protease, subunit B [Haemophilus somnus 129PT]
Length = 856
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 202/413 (48%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDN---------ELKDAF-FELVSFVKLR-MQV 130
+ + +E + L KED D +SR + EL+D + E + + ++
Sbjct: 419 IIQLKLEQQALQKED-DEASRKRLDLLEEELGEKEREYAELEDVWKAEKAALSGAQHIKA 477
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEI 174
E D+ + A+R+ D++K+ + R+ + +++LA V EEI
Sbjct: 478 ELDNAKIQMEQARRISDFAKMSELQYGRIP-ELEKQLAQAESAEGKEMTLLRNRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP + +++ +R++ L KRV GQ++A+ + A+ + +A GLS
Sbjct: 537 AEVLSRATGIPVAKMMEGEKDKLLRMEQELHKRVVGQSEAVVAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +AN ++ D++N ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLANFMF---DDENAMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+S + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E+ A V V G F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKELDYNAMKEIVMSVVGQHFRPEFINRIDETVV 761
>gi|449473904|ref|XP_004154017.1| PREDICTED: chaperone protein ClpB-like [Cucumis sativus]
Length = 861
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE + S + + +++ E K L ++ +
Sbjct: 423 IIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAE 482
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDVEEI 174
+E + A+RV D Y KI + +I + GK L V EI
Sbjct: 483 LEQAKI--AIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L +RV GQN+A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSQNFRPEFINRIDEVVV 766
>gi|365153106|ref|ZP_09349550.1| chaperone ClpB [Campylobacter sp. 10_1_50]
gi|363652422|gb|EHL91462.1| chaperone ClpB [Campylobacter sp. 10_1_50]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 192/423 (45%), Gaps = 63/423 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H + I D AL A+R++ R A L ++ ID++ + + EL K
Sbjct: 357 LEVHHGITITDSALVAAARLSD--RYIANRFLPDKAIDLIDEAAAELKMQIESEPYELSK 414
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELV 121
K + VE E L ED D + L +I+ E+ D A F +
Sbjct: 415 IKREIVTLQVEKEALKMEDADKNKER--LGEIEKEIADLNEKKLALDTKFENEKAVFGGI 472
Query: 122 SFVKLRMQVEYDDFVSCVHDAKRVKD--------YSKILD------QIDARVHGKFKE-- 165
S + E D S AKR D Y KI D +++ + KE
Sbjct: 473 S----KATKEIDSLKSQAEIAKRNGDLQKAAEIEYGKIADAKKHKHELEEKWEHMKKEGV 528
Query: 166 --KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
K VD E +AE+ SK TGI T +E+Y+R++ L++ V GQ+DA+ + A+
Sbjct: 529 LLKNQVDEELVAEILSKWTGISVKKMLTSEKEKYLRIEEHLRESVVGQDDALHALARAVK 588
Query: 224 KPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ KA GL+ +R +G FLF GP GK + AKA+A L+ D++ LI FDM Y E
Sbjct: 589 RNKA---GLNEGQRPIGSFLFLGPTGVGKTQSAKALAKFLF---DDEKALIRFDMSEYME 642
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ + L V++RPYSV+LFD++EKA+ + N+LL IL D
Sbjct: 643 KHSVSRLLGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEVEKAHKDVFNILLGIL--DDG 700
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
R D NT+II+TS++ + E+ V + FKP L LD +
Sbjct: 701 RATDNKGVTVDFKNTIIILTSNIASNFIMELNGEDRDVAVKNELKNYFKPEFLNRLDDTI 760
Query: 391 VID 393
+ +
Sbjct: 761 IFN 763
>gi|312796158|ref|YP_004029080.1| ClpB protein [Burkholderia rhizoxinica HKI 454]
gi|312167933|emb|CBW74936.1| ClpB protein [Burkholderia rhizoxinica HKI 454]
Length = 364
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + E+ ++++ +L +RV GQ++AI + +A+ + +A
Sbjct: 36 VGAEEIAEVVSRATGIPVARMMQGEREKLLQIEAKLHERVVGQDEAISAVADAIRRSRA- 94
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+D D HLI DM + E S+
Sbjct: 95 --GLADPNRPYGSFLFLGPTGVGKTELCKALAAFLFDTED---HLIRIDMSEFMEKHSVA 149
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 150 RLIGAPPGYVGYEEGGYLTETVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 207
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L +Q+ ++ A V E F+P L +D++VV
Sbjct: 208 QGRTVDFKNTVIVMTSNLGSQQIQSMVGEPHAAVRDAVWEEVKQYFRPEFLNRIDEVVV 266
>gi|300812110|ref|ZP_07092558.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496949|gb|EFK32023.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 819
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 40/267 (14%)
Query: 153 DQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQN 212
++I ++ GK +++ V E++A+V S TG+P + T +R R++G L +RV GQ+
Sbjct: 459 NEIAKKLAGKDEKRSVVGAEDVAKVVSIWTGVPVTQLKTSENKRLARLEGILHERVIGQD 518
Query: 213 DAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
DA+ + A+ + ++ K R +G FLF GP GK ELAKA+A ++ + DN +
Sbjct: 519 DAVKAVANAIRRSRSGLK--DENRPIGSFLFLGPTGVGKTELAKAVAEAVFGSEDN---I 573
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM Y + ES S L+ V++ PYSVVLFD++EKAN I N+
Sbjct: 574 IRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNV 633
Query: 321 LLKILKTDF-----NRKATRGIAAFDLTNTLIIMTSDLKD---EQVYEVMLTATY----- 367
LL++L F RK D NT+IIMTS+L E V +A+
Sbjct: 634 LLRVLDEGFMTDSLGRK-------VDFRNTIIIMTSNLGSRSLEAGSHVGFSASQEDQGK 686
Query: 368 ---GRVNEVTGSLFKPSLLKLLDKLVV 391
+V T F+P L +D+ +V
Sbjct: 687 LIAEKVTRATKDFFRPEFLNRIDEKIV 713
>gi|347539270|ref|YP_004846695.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
gi|345642448|dbj|BAK76281.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
Length = 858
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 195/420 (46%), Gaps = 66/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +E+DK
Sbjct: 361 HGVDITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEEMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I++E+ E ++ ++
Sbjct: 419 LIQLKIEREAVKKESDEASQKRLGL--IEDEIDRLSREYADLEEIWKAEKATAQGSQSIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-----GKFKEK------LAVDV 171
E D + D KR D+ K+ L Q++AR+ G +K V
Sbjct: 477 EEIDRLKVEMEDLKRQGDWQKLAELQYGKLPQLEARLKEAEAAGAGTQKPNRLLRTQVGA 536
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV S++TGIP S E+ ++++ + +R+ GQ++A+ + +A+ + ++ G
Sbjct: 537 EEIAEVVSRMTGIPVSKMLAGEREKLLKMEEVMHERLVGQDEAVRAVSDAIRR---SRSG 593
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL K +A L+D+ D HLI DM Y E S+
Sbjct: 594 LSDPNRPYGSFLFLGPTGVGKTELCKTLAGFLFDSED---HLIRIDMSEYMEKHSVARLI 650
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 GAPPGYVGYEEGGQLTEQVRRKPYSVILLDEVEKAHPEVFNILLQVL--DDGRLTDGQGR 708
Query: 339 AFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+++MTS++ + + Y+V+ A V F+P + +D++VV
Sbjct: 709 TVDFKNTVVVMTSNIGSQHIQAMGSDDYQVIKLAVMAEVK----GYFRPEFINRIDEVVV 764
>gi|261380959|ref|ZP_05985532.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
gi|284796218|gb|EFC51565.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTTDIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVSRLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|307250341|ref|ZP_07532290.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254986|ref|ZP_07536804.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259422|ref|ZP_07541147.1| hypothetical protein appser11_12190 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306857616|gb|EFM89723.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861859|gb|EFM93835.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866358|gb|EFM98221.1| hypothetical protein appser11_12190 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 359 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 417 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 474
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 475 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
gi|74056328|gb|AAZ96768.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
Length = 859
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ M ++ L RV GQ++A+ V+ +A+ + +A
Sbjct: 532 VGAEEIAEVVSRATGIPVSKMMQGERDKLMHMEDHLHGRVVGQDEAVAVVSDAIRRSRA- 590
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R LG FLF GP GK EL K +A L+D+ + H++ DM + E S+
Sbjct: 591 --GLSDPNRPLGSFLFLGPTGVGKTELCKTLAEYLFDSAE---HMVRIDMSEFMEKHSVA 645
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 646 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEIEKAHPDVFNVLLQVL--DDGRLTDG 703
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A G V S F+P + +D+
Sbjct: 704 QGRTVDFRNTVIVMTSNLGSQMIQQMSGDDYQVVKLAVLGEVK----SYFRPEFINRIDE 759
Query: 389 LVV 391
+VV
Sbjct: 760 VVV 762
>gi|334125226|ref|ZP_08499217.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
gi|333387301|gb|EGK58501.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
Length = 861
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE + S + + +++ E K L ++ +
Sbjct: 423 IIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAE 482
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDVEEI 174
+E + A+RV D Y KI + +I + GK L V EI
Sbjct: 483 LEQAKI--AIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTDAEI 540
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L +RV GQN+A++ + A+ + +A GLS
Sbjct: 541 AEVLARWTGIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRA---GLSD 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 655 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 713 FRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSQNFRPEFINRIDEVVV 766
>gi|113474405|ref|YP_720466.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110165453|gb|ABG49993.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 870
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 23/234 (9%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAE+ SK TGIP S +E+ + ++G L KRV GQN+A+ + +A+ + +A GL
Sbjct: 541 DIAEIISKWTGIPISKLVESEKEKLLHLEGELHKRVIGQNEAVSAVSDAIQRSRA---GL 597
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R + F+F GP GK EL KA+A L+D D ++ DM Y E S+
Sbjct: 598 ADPNRPVASFIFLGPTGVGKTELGKALAAYLFDTED---AMVRIDMSEYMEKHSVSRLIG 654
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++RPY+V+LFD+IEKA+ + N++L+IL D R
Sbjct: 655 APPGYVGYDEGGQLTEAIRRRPYTVILFDEIEKAHPDVFNIMLQIL--DDGRVTDSQGHK 712
Query: 340 FDLTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D N++IIMTS++ + + +V GRV E + F+P L +D+ ++
Sbjct: 713 VDFKNSVIIMTSNIGSQYILDVTDDYEQMQGRVMEALRAAFRPEFLNRIDETII 766
>gi|37678899|ref|NP_933508.1| clpB protein [Vibrio vulnificus YJ016]
gi|54035791|sp|Q7MNK1.1|CLPB_VIBVY RecName: Full=Chaperone protein ClpB
gi|37197640|dbj|BAC93479.1| clpB protein [Vibrio vulnificus YJ016]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 196/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL------------------ 120
+ + +E + L E + S + LR ++ EL + F EL
Sbjct: 419 IIQLKIEQQALSNEHDEASEK--RLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIK 476
Query: 121 VSFVKLRMQVEYDDFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDV 171
+ + RM +E F D R+ + Y +I + Q+D + +E K V
Sbjct: 477 AALEQARMDME---FARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A G
Sbjct: 534 NEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y +V EV F+P L +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFLNRVDETVV 762
>gi|294678922|ref|YP_003579537.1| chaperone ClpB [Rhodobacter capsulatus SB 1003]
gi|294477742|gb|ADE87130.1| chaperone ClpB [Rhodobacter capsulatus SB 1003]
Length = 871
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 194/424 (45%), Gaps = 74/424 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + R D +ELD
Sbjct: 361 HGVRISDSALVAAATLSH--RYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDRQ 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA----------------FFELVSFVK 125
+ + +E E L +ED D +S+ L +++ +L D E VK
Sbjct: 419 ILQMQIEAEALRRED-DSASKD-RLEKLEKDLADVQQRAAEMTAKWQAERDMLEASRSVK 476
Query: 126 LRMQVEYDDFVSCVHDAKRVKDYSK--------------ILDQIDARVHGKFKEKLAVDV 171
++ D + + AKR +++K +L + + GK E+ AV
Sbjct: 477 EQL----DQARAALEQAKREGNFAKAGELQYGRIPELERVLAEAETVAEGKMVEE-AVRP 531
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E+IAEV + TGIP S E+ ++++ L KRV GQ+ AI + A+ + A+ G
Sbjct: 532 EQIAEVVERWTGIPTSKMLEGEREKLLKMEEELHKRVIGQDAAITAVANAVRR---ARAG 588
Query: 232 LSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L+ R LG FLF GP GK EL KA+AN L+ D+D ++ DM + E S+
Sbjct: 589 LNDENRPLGSFLFLGPTGVGKTELTKAVANYLF---DDDAAMVRIDMSEFMEKHSVSRLI 645
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK----TDFNRKAT 334
+ L V++RPY VVLFD++EKA+ + N+LL++L TD +
Sbjct: 646 GAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGMLTDGQGR-- 703
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG-----RVNEVTGSLFKPSLLKLLDKL 389
D TLI++TS+L Q + T G V E F+P L LD++
Sbjct: 704 ----TVDFKQTLIVLTSNL-GSQALSRLPEGTDGSEAKAEVMEAVRMHFRPEFLNRLDEM 758
Query: 390 VVID 393
V+ D
Sbjct: 759 VIFD 762
>gi|303250165|ref|ZP_07336367.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252723|ref|ZP_07534614.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651228|gb|EFL81382.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859755|gb|EFM91777.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 359 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 417 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 474
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 475 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|303253337|ref|ZP_07339486.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648019|gb|EFL78226.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 359 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 417 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 474
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 475 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|152979666|ref|YP_001345295.1| ATPase [Actinobacillus succinogenes 130Z]
gi|150841389|gb|ABR75360.1| ATPase AAA-2 domain protein [Actinobacillus succinogenes 130Z]
Length = 856
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 197/414 (47%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D LDK +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPLPLDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KED D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALKKED-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
E ++ + + A+R D +K + ++ +++LA V EE
Sbjct: 477 AELENARTQMEQARRAGDLNK-MSELQYGTIPALEKQLADADKSEGKEMKLLRYRVTDEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S +E+ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 536 IAEVLSRATGIPVSRMMEGEKEKLLRMEQELHKRVVGQSEAVEAVANAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL K +AN ++ D++N ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DDENAMVRIDMSEFMEKHSVSRLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E G V V G F+P + +D+ VV
Sbjct: 708 DFRNTVVIMTSNLGSDLIQENRSLGYEGMKEIVMSVVGQHFRPEFINRIDETVV 761
>gi|386761922|ref|YP_006235557.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter
cinaedi PAGU611]
gi|385146938|dbj|BAM12446.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter
cinaedi PAGU611]
Length = 861
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 194/425 (45%), Gaps = 64/425 (15%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
+LE H + I D AL A++++ R L ++ ID++ + + EL
Sbjct: 355 NLEAHHNVNITDLALIAAAKLSS--RYITDRFLPDKAIDLIDEAAAELKMQIESEPLELS 412
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVS-----------FVK 125
K K + VE + L E TD S + +ID EL++ E +S F +
Sbjct: 413 KVKKQIANLEVERQALNMEKTD--SNQARITEIDKELENLKEEKISLNGRFEQEKNVFTQ 470
Query: 126 L-RMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKL----------------- 167
+ ++ E D +AKR DYSK +ID +GK + L
Sbjct: 471 IANIKAELDSLRRESENAKRSGDYSKAA-EID---YGKIPQTLNKEKELQDQWEQMQKNG 526
Query: 168 -----AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
AV E IA V S+ +G+P +ER + ++ L K V GQ AI I A+
Sbjct: 527 TLLKNAVTQESIASVVSRWSGVPIKKMLQSQKERILDIESELTKSVVGQESAIKAIARAI 586
Query: 223 TKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYT 281
+ KA GLS + R +G FLF GP GK + AK +A L+DN + L+ DM Y
Sbjct: 587 KRNKA---GLSDANRPIGSFLFLGPTGVGKTQCAKTLAEFLFDNAKS---LVRIDMSEYM 640
Query: 282 ELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDF 329
E ++ + L ++++PYS+VLFD++EKA+ + N+LL++L D
Sbjct: 641 EKHAVSRLVGAPPGYVGYEEGGVLTEAIRRKPYSIVLFDEVEKAHPDVFNILLQVL--DD 698
Query: 330 NRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM-LTATYGRVNEVTGSLFKPSLLKLLDK 388
R + D +NT+II+TS++ +++ E+ V E FKP L LD
Sbjct: 699 GRLSDNKGVVVDFSNTIIILTSNIASDKILELQDKEQKQNAVKEALRMYFKPEFLNRLDD 758
Query: 389 LVVID 393
+V+ +
Sbjct: 759 VVIFN 763
>gi|307248109|ref|ZP_07530137.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306855286|gb|EFM87461.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 864
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 366 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 424 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 481
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 482 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEE 541
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 542 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 598
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 599 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 655
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 656 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 713
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 714 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 768
>gi|167386790|ref|XP_001737903.1| heat shock protein [Entamoeba dispar SAW760]
gi|165899112|gb|EDR25793.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 132/246 (53%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M+++ L KRV GQN+A+ + +A+ +
Sbjct: 531 LQVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTIVIMTSNLGSEIIMKGV--ETEGQVSRKVKETVMEIVKKTFKPEFLNR 760
Query: 386 LDKLVV 391
LD +++
Sbjct: 761 LDDIII 766
>gi|165976510|ref|YP_001652103.1| ATP-dependent Clp protease subunit B [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307261568|ref|ZP_07543236.1| hypothetical protein appser12_11290 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|165876611|gb|ABY69659.1| ATP-dependant Clp protease chain B [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306868691|gb|EFN00500.1| hypothetical protein appser12_11290 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 857
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 359 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 417 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 474
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 475 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|408417727|ref|YP_006759141.1| chaperone ClpB [Desulfobacula toluolica Tol2]
gi|405104940|emb|CCK78437.1| ClpB: chaperone [Desulfobacula toluolica Tol2]
Length = 862
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 196/425 (46%), Gaps = 76/425 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D A+ A+ ++ R A L ++ +D++ + R D + +D+ +
Sbjct: 360 HGIRIKDSAIVAAATLSN--RYIADRFLPDKAVDLIDECASRLRIEIDSMPRAIDEIQRK 417
Query: 82 LRRAVVEYEQLVKEDTDHSS--------------------RSFWLRQIDNELKDAFFELV 121
+ +A +E + L+KE S R W DNE + + +
Sbjct: 418 ITQAQIERQALIKEKDKASKERLEKLEMDIAVMKEEVGPLRLHW----DNEKQ--LIQDI 471
Query: 122 SFVKLRMQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKF---------KE 165
S ++ M D F + H A+R D + ++Q+ + K K
Sbjct: 472 SAIRENM----DRFQTQAHVAERNGDLETVAKIRYGTIEQLQRDLEAKKQALNDLQQDKR 527
Query: 166 KLAVDVEE--IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
L DVEE +AEV S TGIP S +E+ ++++G +KKRV GQ AID + A+
Sbjct: 528 MLKEDVEESDVAEVVSTWTGIPVSKMLKGEQEKLVQMEGYIKKRVIGQKKAIDAVSNAVR 587
Query: 224 KPKAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ A+ GL R +G F+F GP GK ELAK++A ++ D+D ++ DM Y E
Sbjct: 588 R---ARSGLQPEDRPIGTFIFMGPTGVGKTELAKSLAEFIF---DSDQAMVRVDMSEYME 641
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ + L V++RPYSV+LFD+IEKA+ + N+LL++L D
Sbjct: 642 KHSVARLIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHQDVFNVLLQVL--DDG 699
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA-----TYGRVNEVTGSLFKPSLLKL 385
R D NT+IIMTS++ + E ++ T + +F+P L
Sbjct: 700 RMTDGHGRTVDFRNTIIIMTSNVGSRFLQEAGISGLDENKTQQSIAHALKEVFRPEFLNR 759
Query: 386 LDKLV 390
+D+++
Sbjct: 760 IDEII 764
>gi|220933996|ref|YP_002512895.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995306|gb|ACL71908.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 859
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 194/419 (46%), Gaps = 66/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +E+D+ +
Sbjct: 361 HGVEITDPAIVAAAMLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVH- 140
L + +E E L KE +D +SR L ++ E+ E ++ + E H
Sbjct: 419 LIQLKIEREALKKE-SDEASRK-RLDTLEGEIDKLEREFADLDEI-WKAEKAALSGTAHI 475
Query: 141 ------------DAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEE 173
A+R D Y +I + Q+D + E + V EE
Sbjct: 476 KEELERARLELETARRAGDLARMSELQYGRIPELEKQLDMAAQAEMHEMRLLRNKVSDEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S E+ +R++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 536 IAEVVSRWTGIPVSKMLEGEREKLLRMEEALTTRVVGQSEAVKAVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
RR G FLF GP GK EL KA+A L+D + ++ DM + E S+ +
Sbjct: 593 DPRRPNGSFLFLGPTGVGKTELTKALAAFLFDTEEA---MVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L E+ YE M A V EV GS F+P + +D++VV
Sbjct: 708 DFRNTVIVMTSNLGSQIIQEMAGEEHYEAMKAA----VMEVVGSHFRPEFINRVDEVVV 762
>gi|440229579|ref|YP_007343372.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
gi|440051284|gb|AGB81187.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
Length = 857
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALNKESDDASKKRLEMLSTELEQKEREYSELEEEWKAEKASLSGTQTIKAE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEIAE 176
+ + A+RV D Y KI D Q+ A + K + V EIAE
Sbjct: 479 LEQAKISLEQARRVGDLGRMSELQYGKIPDLEKQLAAATQSEGKTMKLLRNRVTDAEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V +K TGIP + ++ +R++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 539 VLAKATGIPVARMLEGERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A+ L+D++D ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALASFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + V E+ G F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVGHHFRPEFINRIDEVVV 762
>gi|295676449|ref|YP_003604973.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
gi|295436292|gb|ADG15462.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
Length = 865
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIESKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ A V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMVGEPQEAVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|343498451|ref|ZP_08736487.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
gi|418477074|ref|ZP_13046210.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342824423|gb|EGU58968.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
gi|384575269|gb|EIF05720.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 857
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFEL------------------ 120
+ + +E + L E D S + + +++EL + AF EL
Sbjct: 419 IIQLKIEQQALTNEHDDASEKRLTI--LNDELAEKERAFAELEEVWNAEKAALSGTQHIK 476
Query: 121 VSFVKLRMQVEYDDFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDV 171
+ RM +E F D R+ + Y +I + Q+D + +E + V
Sbjct: 477 SELEQARMDME---FARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIA+V SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A G
Sbjct: 534 NEIADVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQTEAVEVVANAIRRSRA---G 590
Query: 232 LSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS Q +G FLF GP GK EL K +A+ ++D+ D ++ DM + E S+
Sbjct: 591 LSDPNQPIGSFLFLGPTGVGKTELCKTLASFMFDSED---AMVRIDMSEFMEKHSVARLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E + Y +V +V G F+P L +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSTRIQENFGSLDYQGMKEQVMDVVGKHFRPEFLNRVDESVV 762
>gi|325273285|ref|ZP_08139562.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
gi|324101570|gb|EGB99139.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
Length = 854
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ +A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 ALLHQRVIGQGEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 736 RAAVMDAVGAHFRPEFINRIDEVVVFE 762
>gi|386817480|ref|ZP_10104698.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
gi|386422056|gb|EIJ35891.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
Length = 870
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 140/268 (52%), Gaps = 28/268 (10%)
Query: 144 RVKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRV 200
++ + + L DA V+ + + KL V EEIA++ S+ TGIP S +E+ +++
Sbjct: 506 KIPELEQQLAAADAAVNSQQETKLLKNKVTDEEIADIVSRWTGIPVSKMLESEKEKLLQM 565
Query: 201 QGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIA 259
+ L KRV GQ +A+ + A+ + A+ GLS R G FLF GP GK EL KA+A
Sbjct: 566 EDVLGKRVIGQREAVVAVSNAIRR---ARAGLSDPNRPSGSFLFLGPTGVGKTELTKALA 622
Query: 260 NELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLF 307
L+ D D+ ++ DM + E S+ + L V++RPYSV+L
Sbjct: 623 KFLF---DTDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILL 679
Query: 308 DKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY 367
D++EKA++ + N+LL++L D R D NT+IIMTS+L + E+ Y
Sbjct: 680 DEVEKAHADVFNVLLQVL--DDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMTGEENY 737
Query: 368 GR----VNEVTGSLFKPSLLKLLDKLVV 391
R V EV G+ F+P + +D+ VV
Sbjct: 738 ERMKAAVMEVVGTHFRPEFINRIDETVV 765
>gi|298368650|ref|ZP_06979968.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
str. F0314]
gi|298282653|gb|EFI24140.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
str. F0314]
Length = 857
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYDAVKEAVMEEVKAYFRPEMINRIDEVVV 763
>gi|430833117|ref|ZP_19451130.1| chaperone ClpB [Enterococcus faecium E0679]
gi|430838077|ref|ZP_19456027.1| chaperone ClpB [Enterococcus faecium E0688]
gi|430858164|ref|ZP_19475793.1| chaperone ClpB [Enterococcus faecium E1552]
gi|430486572|gb|ELA63408.1| chaperone ClpB [Enterococcus faecium E0679]
gi|430492357|gb|ELA68771.1| chaperone ClpB [Enterococcus faecium E0688]
gi|430546116|gb|ELA86082.1| chaperone ClpB [Enterococcus faecium E1552]
Length = 869
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNMLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|348027237|ref|YP_004767042.1| ATP-dependent chaperone protein ClpB [Megasphaera elsdenii DSM
20460]
gi|341823291|emb|CCC74215.1| ATP-dependent chaperone protein ClpB [Megasphaera elsdenii DSM
20460]
Length = 862
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 126/239 (52%), Gaps = 26/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IA+V S+ TGIP + T E+ + + L KRV GQ+DA+ V+ +A+ + +A
Sbjct: 532 VGEEDIAQVVSRWTGIPVTKMMTGEREKLLHLDETLHKRVVGQDDAVRVVSDAIIRARAG 591
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELAK +A L+D+ N +I DM Y E ++
Sbjct: 592 IK--DPNRPIGSFIFLGPTGVGKTELAKTLAEALFDDERN---IIRIDMSEYMEKHTVSR 646
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+L D+IEKA+ I N+LL+IL D R
Sbjct: 647 LIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHPDIFNVLLQIL--DDGRLTDGK 704
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
+ NT+IIMTS+L +E++ + Y +V E+ F+P L +D +VV
Sbjct: 705 GRVVNFKNTIIIMTSNLGS---HEILESKDYDEANAKVRELLKQYFRPEFLNRVDDIVV 760
>gi|430819984|ref|ZP_19438628.1| chaperone ClpB [Enterococcus faecium E0045]
gi|430440187|gb|ELA50464.1| chaperone ClpB [Enterococcus faecium E0045]
Length = 869
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNMLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|313123097|ref|YP_004033356.1| ATP-dependent clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279660|gb|ADQ60379.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 819
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 40/267 (14%)
Query: 153 DQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQN 212
++I ++ GK +++ V E++A+V S TG+P + T +R R++G L +RV GQ+
Sbjct: 459 NEIAKKLAGKDEKRSVVGAEDVAKVVSIWTGVPVTQLKTSENKRLARLEGILHERVIGQD 518
Query: 213 DAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
DA+ + A+ + ++ K R +G FLF GP GK ELAKA+A ++ + DN +
Sbjct: 519 DAVKAVANAIRRSRSGLK--DENRPIGSFLFLGPTGVGKTELAKAVAEAVFGSEDN---I 573
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM Y + ES S L+ V++ PYSVVLFD++EKAN I N+
Sbjct: 574 IRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNV 633
Query: 321 LLKILKTDF-----NRKATRGIAAFDLTNTLIIMTSDLKD---EQVYEVMLTATY----- 367
LL++L F RK D NT+IIMTS+L E V +A+
Sbjct: 634 LLRVLDEGFMTDSLGRK-------VDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGK 686
Query: 368 ---GRVNEVTGSLFKPSLLKLLDKLVV 391
+V T F+P L +D+ +V
Sbjct: 687 LIAEKVTRATKDFFRPEFLNRIDEKIV 713
>gi|153007024|ref|YP_001381349.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152030597|gb|ABS28365.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 893
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 197/428 (46%), Gaps = 78/428 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H+++IQD AL A+R++Q R L ++ ID++ + R D E+D+
Sbjct: 378 HKVRIQDAALVEAARLSQ--RYITDRFLPDKAIDLVDESASRLRIEIDSMPTEVDE---- 431
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
+RR V + E Q ++ + D +SR L Q++ EL E R++ +D +
Sbjct: 432 VRRRVAQLEIERQGLQREQDEASR-HRLGQVEKELAQLNEEFT-----RLKSRWDAEKAV 485
Query: 139 VHDAKRVKDYSKILDQIDA-----------------------RVHGKFKEKLA------- 168
+ + + K L Q A R G+ EKLA
Sbjct: 486 IQEIAQAKQEIDALKQQQAQAEREANFQKAAEIKFGRLPELQRAVGELHEKLAQLQSAGG 545
Query: 169 ------VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
V EEIAEV SK TGIP S E+ + ++ RL +RV GQ++A+ + A+
Sbjct: 546 PMLREEVTPEEIAEVVSKWTGIPVSKLMEGEVEKLLGMEDRLAQRVVGQDEAVQAVSAAV 605
Query: 223 TKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYT 281
+ A+ GL R +G F+F GP GK E A+A+A L+ D++ ++ DM Y
Sbjct: 606 RR---ARSGLQDPHRPIGSFIFLGPTGVGKTETARALAEFLF---DDEGAMVRLDMSEYM 659
Query: 282 ELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDF 329
E ++ + L V++RPY+V+LFD+IEKA+ + N+LL+IL D
Sbjct: 660 EKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEIEKAHHDVFNVLLQIL--DD 717
Query: 330 NRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM------LTATYGRVNEVTGSLFKPSLL 383
R D N ++IMTS++ +++ + ++A E + F+P L
Sbjct: 718 GRLTDGQGRTVDFRNAVVIMTSNIGSQEIQRLAGRPGADVSAIREAALENLRAEFRPEFL 777
Query: 384 KLLDKLVV 391
+D++VV
Sbjct: 778 NRVDEIVV 785
>gi|262372812|ref|ZP_06066091.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
gi|262312837|gb|EEY93922.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
Length = 859
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 199/414 (48%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKDAFFELVSFVK--LRMQV 130
L + ++ E VK+D D S++ +QI N+L++ + + V+ + QV
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQV 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLEQAEVAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP S E+ + ++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVSKMLQGEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ AT V V S F+P + +D+LV+
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGEGATDDEVRTVVMSAVSQHFRPEFINRIDELVI 760
>gi|302871695|ref|YP_003840331.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor obsidiansis
OB47]
gi|302574554|gb|ADL42345.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor obsidiansis
OB47]
Length = 864
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L KRV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHKRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 -DPRKPIGSFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 654 AQPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G ++E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIII 769
>gi|78184486|ref|YP_376921.1| ATPase [Synechococcus sp. CC9902]
gi|78168780|gb|ABB25877.1| ATPase [Synechococcus sp. CC9902]
Length = 862
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 26/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IAEV +K TGIP + E+ ++++ L +RV GQ+ A+ + +A+ + +A
Sbjct: 536 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLETDLHRRVIGQDQAVTAVADAIQRSRA- 594
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R + FLF GP GK EL+KA+AN L+D++D ++ DM Y E ++
Sbjct: 595 --GLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDA---MVRIDMSEYMEKHTVS 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+V+LFD++EKA+ + N++L+IL D R
Sbjct: 650 RLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL--DDGRVTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D TNT++I+TS++ + + E+ A RVNE + F+P L LD +
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSILELAGDPDQHQAMEARVNEALKAHFRPEFLNRLDDQI 767
Query: 391 V 391
+
Sbjct: 768 I 768
>gi|411002904|ref|ZP_11379233.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
Length = 879
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 197/423 (46%), Gaps = 61/423 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVKIQDTALVSAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE +D +S++ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEEAALSKE-SDPASQA-RLEELRKELADLRGEADAKHAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK-----------------RVKDYSKIL----DQIDARVHGKFKEKL 167
Q D HDA+ R++D + L +Q+ R +
Sbjct: 478 QELRKDLEQVRHDAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLATRQGQNRLLRE 537
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V EEIAE+ + TGIP + ++ +R+ L++RV GQ++A+ ++ +A+ + ++
Sbjct: 538 VVTEEEIAEIVAAWTGIPVARLQEGERDKLLRLDEILRERVVGQDEAVKLVADAIIRARS 597
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ RR +G F+F GP GK EL K +A L+D+ DN ++ DM Y E ++
Sbjct: 598 GIR--DPRRPIGSFIFLGPTGVGKTELTKTLARALFDSEDN---MVRLDMSEYQERHTVS 652
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD+IEKA+S + N LL+IL D R
Sbjct: 653 RLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQIL--DDGRITDA 710
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+IIMTS++ E + E+ A + E+ G F+P L +D
Sbjct: 711 QGRTVDFRNTVIIMTSNIGSEHLLDGATVEGEIKPEARALVMGELRGH-FRPEFLNRVDD 769
Query: 389 LVV 391
+V+
Sbjct: 770 IVL 772
>gi|241758789|ref|ZP_04756902.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
flavescens SK114]
gi|241320997|gb|EER57210.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
flavescens SK114]
Length = 588
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 92 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 149
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 150 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 207
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 208 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 267
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 268 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 324
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 325 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 381
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 382 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 439
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 440 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 494
>gi|153939896|ref|YP_001389780.1| clpB protein [Clostridium botulinum F str. Langeland]
gi|384460852|ref|YP_005673447.1| clpB protein [Clostridium botulinum F str. 230613]
gi|152935792|gb|ABS41290.1| clpB protein [Clostridium botulinum F str. Langeland]
gi|295317869|gb|ADF98246.1| clpB protein [Clostridium botulinum F str. 230613]
Length = 866
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESVRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|417843784|ref|ZP_12489850.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
gi|341948532|gb|EGT75158.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
Length = 856
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 195/413 (47%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELADKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E D + + A+R D +K+ + Q++ G+ KE + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPTLEKQLEQAETGEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E + V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKEESYSEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|302344661|ref|YP_003809190.1| ATP-dependent chaperone ClpB [Desulfarculus baarsii DSM 2075]
gi|301641274|gb|ADK86596.1| ATP-dependent chaperone ClpB [Desulfarculus baarsii DSM 2075]
Length = 861
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 197/418 (47%), Gaps = 60/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ R L ++ ID++ + + D +ELD+ +
Sbjct: 360 HGVRIKDAALVAAATLSD--RYITDRFLPDKAIDLIDEAASKLRIDIDSLPEELDQLQRR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKDAF----------FELVSFVK- 125
L + +E E L KE + S+R + Q++ + +DA E + +K
Sbjct: 418 LMQMTIEVEALKKETDEASARRLEKLRGEIAQLEGQ-RDALKEQWQREKQSIETIREIKE 476
Query: 126 ----LRMQVEYDDFVSCVHDAKRVKDYSKI------LDQIDA-----RVHGKFKEKLAVD 170
LR+ +E + A +K YS I L Q A R G+ K VD
Sbjct: 477 RLEKLRLDMERAGREGDLSRASELK-YSAIPAAEKELAQRQAAMDELRDGGEALVKEEVD 535
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
E++AEV K TGIP + E+ + ++ R+ KRV GQ DA++ + A+ + A+
Sbjct: 536 SEDVAEVVGKWTGIPVARLMEGEREKLLHMEERIAKRVVGQKDAVEAVANAVRR---ARS 592
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL R +G F+F GP GK ELA+A+A ++ D++ +I DM + E S+
Sbjct: 593 GLQDPNRPVGSFIFMGPTGVGKTELARALAEFMF---DDEQAMIRLDMSEFMEKHSVSRL 649
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSVVLFD+IEKA+ + N LL+IL D R
Sbjct: 650 IGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEIEKAHPDVFNALLQIL--DDGRLTDGQG 707
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D TN +IIMTS++ + + ++ R+ E + FKP L +D +V+
Sbjct: 708 RTVDFTNAIIIMTSNIGSQYIQDLAGPHQRQRMEEAVMTALRAQFKPEFLNRVDNVVI 765
>gi|94985312|ref|YP_604676.1| ATPase AAA [Deinococcus geothermalis DSM 11300]
gi|94555593|gb|ABF45507.1| ATPase AAA-2 [Deinococcus geothermalis DSM 11300]
Length = 861
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 68/426 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKR---CLNSRDKYQKELDKH 78
H + + D AL A++++ R +L ++ ID++ + R L S + +L++
Sbjct: 361 HNVNLTDPALVAAAQLSH--RYITDRQLPDKAIDLIDEAAARLRMALESSPERIDQLERR 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVE------ 131
K L +E E L KE D D +R L I+++LK A + ++ V+ R + E
Sbjct: 419 KLQLE---IEREALKKEKDVDSQNR---LLDIEDQLK-AITDELAEVRSRWEAERQEVQA 471
Query: 132 -------YDDFVSCVHDAKRVKDYSK-------ILDQIDARVHGKFKEKLA--------V 169
D + + A+R D K L Q++ V + + KL V
Sbjct: 472 LREKRDQLDQVRTEIEKARREYDLGKAAQLEYGTLPQLEKDVQ-ELERKLKAAEFAHMEV 530
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
E+IA V S+ TGIP S E+ +R++ +L +RV GQ+ AI + +A+ + A+
Sbjct: 531 TDEDIASVVSRWTGIPVSKLMEGEREKLLRLEEQLHERVIGQDRAIVSVADAIRR---AR 587
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GL+ R LG F+F GP GK ELAKA+A L+D+ D +I DM Y E S+
Sbjct: 588 AGLNDPNRPLGSFMFLGPTGVGKTELAKALAEFLFDSPDA---MIRIDMSEYMEKHSVAR 644
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 645 LIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVLLQVL--DDGRLTDGQ 702
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG-----RVNEVTGSLFKPSLLKLLDKLVV 391
D NTLIIMTS++ + E +V +V + F+P L +D ++V
Sbjct: 703 GRTVDFRNTLIIMTSNIGSHLILEAQARGDSPESIREQVLQVLQAHFRPEFLNRIDDIIV 762
Query: 392 IDLAVP 397
D P
Sbjct: 763 FDALTP 768
>gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Wolbachia endosymbiont strain TRS of Brugia malayi]
gi|58418757|gb|AAW70772.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Wolbachia endosymbiont strain TRS of Brugia malayi]
Length = 853
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 19/232 (8%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
++IA + SK TGIP +E+ + ++ + KRV GQ DAI+ I A+ + ++ +
Sbjct: 533 DDIANIVSKWTGIPVDNMMHSEKEKLLSMENEIGKRVIGQKDAIEAISNAVRRSRSGVQ- 591
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R G FLF GP GK ELAKA+A L+D+ + L+ FDM Y E S+
Sbjct: 592 -DTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQ---SALLRFDMSEYMEKHSVSKLIG 647
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPY V+LFD+IEKAN I NLLL+IL D R
Sbjct: 648 APPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQIL--DEGRLTDSHGKL 705
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + + V ++ S F+P L LD++++
Sbjct: 706 IDFRNTILILTSNLGAEIMLKGVADFVKSEVMQIVKSAFRPEFLNRLDEIII 757
>gi|422845089|ref|ZP_16891799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|325684709|gb|EGD26863.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 819
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 40/267 (14%)
Query: 153 DQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQN 212
++I ++ GK +++ V E++A+V S TG+P + T +R R++G L +RV GQ+
Sbjct: 459 NEIAKKLAGKDEKRSVVGAEDVAKVVSIWTGVPVTQLKTSENKRLARLEGILHERVIGQD 518
Query: 213 DAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
DA+ + A+ + ++ K R +G FLF GP GK ELAKA+A ++ + DN +
Sbjct: 519 DAVKAVANAIRRSRSGLK--DENRPIGSFLFLGPTGVGKTELAKAVAEAVFGSEDN---I 573
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM Y + ES S L+ V++ PYSVVLFD++EKAN I N+
Sbjct: 574 IRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNV 633
Query: 321 LLKILKTDF-----NRKATRGIAAFDLTNTLIIMTSDLKD---EQVYEVMLTATY----- 367
LL++L F RK D NT+IIMTS+L E V +A+
Sbjct: 634 LLRVLDEGFMTDSLGRK-------VDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGK 686
Query: 368 ---GRVNEVTGSLFKPSLLKLLDKLVV 391
+V T F+P L +D+ +V
Sbjct: 687 LIAEKVTRATKDFFRPEFLNRIDEKIV 713
>gi|406590647|ref|ZP_11065007.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD1E]
gi|404469075|gb|EKA13913.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD1E]
Length = 869
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 153/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVPKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ S A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTISDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|409387248|ref|ZP_11239499.1| ClpB protein [Lactococcus raffinolactis 4877]
gi|399205624|emb|CCK20414.1| ClpB protein [Lactococcus raffinolactis 4877]
Length = 864
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 230/489 (47%), Gaps = 79/489 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + + ELD+
Sbjct: 363 HGVKIHDNALIAAATLSN--RYITDRYLPDKAIDLVDEASATIRVEMNSSPTELDQITRK 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHD 141
L + +E E L KE D S + + Q EL + E + +K+R + E + V +H
Sbjct: 421 LMQLEIEEEALKKETDDGSKKRLAILQ--EELANTR-ETANALKMRWETE-KEAVEAIH- 475
Query: 142 AKRVK-------------DYSKILDQIDARVHGKFK--EKLAVDVE-------------- 172
AKR + +Y+ L+Q HG EK D+E
Sbjct: 476 AKRAELEQARFDLENAENEYN--LEQAAVLRHGTIPKLEKEVADLEDAQEADAGTHLVQE 533
Query: 173 -----EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
EIAEV +LTGIP + +E+ + + L +RV GQ++A++ + +A+ + +A
Sbjct: 534 SVTDQEIAEVIGRLTGIPVTKLVEGEKEKLLHLADTLHQRVVGQDEAVNAVSDAIIRSRA 593
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ + LG FLF GP GK ELAK++A +L+ D++NH++ DM Y E S+
Sbjct: 594 GLQ--DPNKPLGSFLFLGPTGVGKTELAKSLAEDLF---DSENHMVRIDMSEYMEKHSVS 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D ++
Sbjct: 649 RLVGAPPGYVGYDEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLD-DGRLTDSK 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVML-------TATYGRVNEVTGSLFKPSLLKLLDK 388
G+ D NT++IMTS++ + + + T ++E+ G FKP L +D
Sbjct: 708 GVVV-DFKNTVLIMTSNIGSRTLLDGIKDDGTLDNTTKEAVLDELKGH-FKPEFLNRIDD 765
Query: 389 LVVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAAR-KYGQ 446
VV PL L + ++ + + T+R ++ + + + +T AL IA NA +YG
Sbjct: 766 TVVF---TPLTLSVVKQIIDKIVAQLTERLSH--QDINLELTTDALDWIAKNAYEPEYG- 819
Query: 447 NGEGLKRWM 455
+KR+M
Sbjct: 820 -ARPIKRFM 827
>gi|313673099|ref|YP_004051210.1| ATP-dependent chaperone clpb [Calditerrivibrio nitroreducens DSM
19672]
gi|312939855|gb|ADR19047.1| ATP-dependent chaperone ClpB [Calditerrivibrio nitroreducens DSM
19672]
Length = 866
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 210/422 (49%), Gaps = 64/422 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D A+ A+ ++ + + + ++ ID++ + + D ELD+ +
Sbjct: 362 HGVRIKDSAIVAAAYLSH--KYISDRHMPDKAIDLVDEACAKLRMEIDSMPTELDELERK 419
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSF-----------VKLR-MQ 129
R+ +E Q +K + D S+ L +I+ E+ D ++++ V+++ ++
Sbjct: 420 KRQLEIE-RQALKREQDEVSK-VKLEKIEKEINDLSEKIIALKTHWQNEKNIIVEIKKVK 477
Query: 130 VEYDDFVSCVHDAKRVKDY---SKI-------LDQIDARVHGKFKE--------KLAVDV 171
E +D + + +A+R +Y S+I L++ ++ K KE K VD
Sbjct: 478 EEIEDQKNAMLNAERSGNYELASQIKYGKLVELNRKIEELNNKLKEIQKDKKMLKEEVDE 537
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E+IAE+ +K TGIP + + E+ ++++ L KRV GQ+ AI I EA+ + +A G
Sbjct: 538 EDIAEIIAKWTGIPVTKLLEEEAEKLIKMEENLHKRVIGQDKAISSISEAIRRSRA---G 594
Query: 232 LSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS+ +R +G F+F GP GK ELAKA+A L+D+ D LI DM Y E S+
Sbjct: 595 LSNPKRPIGSFIFLGPTGVGKTELAKALAEFLFDSED---ALIRIDMSEYMEKHSVAKLI 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+LFD+IEKA+ + N++L+IL D R
Sbjct: 652 GAPPGYVGYDEGGQLTEKVRRRPYSVILFDEIEKAHPDVFNIMLQIL--DDGRLTDSKGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTAT-----YGRVNE----VTGSLFKPSLLKLLDKL 389
NT+IIMTS++ E + Y R+++ + FKP L +D +
Sbjct: 710 VVSFKNTVIIMTSNIGSELIQTEFEKGGSWEEEYDRISKLVFNIISQYFKPEFLNRVDDI 769
Query: 390 VV 391
+V
Sbjct: 770 IV 771
>gi|313668136|ref|YP_004048420.1| ClpB protein [Neisseria lactamica 020-06]
gi|313005598|emb|CBN87035.1| ClpB protein [Neisseria lactamica 020-06]
Length = 857
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|83719137|ref|YP_442726.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|167581671|ref|ZP_02374545.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis TXDOH]
gi|167619788|ref|ZP_02388419.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis Bt4]
gi|257138938|ref|ZP_05587200.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|83652962|gb|ABC37025.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
Length = 865
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M ++ + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGSSQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|253699226|ref|YP_003020415.1| ATP-dependent chaperone ClpB [Geobacter sp. M21]
gi|251774076|gb|ACT16657.1| ATP-dependent chaperone ClpB [Geobacter sp. M21]
Length = 862
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 137/247 (55%), Gaps = 27/247 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E +AEV +K TGIP S E+ ++++ RLK RV GQ++A+ ++ A+ + A
Sbjct: 535 VDAEMVAEVVAKWTGIPVSRMLETESEKLVKMEERLKSRVVGQDEALTLVSNAVRR---A 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G F+F GP GK E A+A+A+ L+ D+D ++ DM Y E ++
Sbjct: 592 RSGLSDPNRPIGSFIFLGPTGVGKTETARALASFLF---DDDQAVVRIDMSEYQEKHTVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY +VLFD+IEKA+ + N+ L+IL D R
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRRPYCIVLFDEIEKAHPEVFNVFLQIL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRV-NEVTGSL---FKPSLLKLLDKLVV 391
D N++IIMTS+L + + + T YG++ +EV +L FKP L +D++V+
Sbjct: 707 QGRTVDFKNSVIIMTSNLGSQWIQQYGAT-DYGKMQSEVMETLREAFKPEFLNRVDEIVI 765
Query: 392 IDLAVPL 398
A+PL
Sbjct: 766 YH-ALPL 771
>gi|237793732|ref|YP_002861284.1| clpB protein [Clostridium botulinum Ba4 str. 657]
gi|229261258|gb|ACQ52291.1| clpB protein [Clostridium botulinum Ba4 str. 657]
Length = 866
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLEARVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|312793685|ref|YP_004026608.1| ATP-dependent chaperone clpb [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180825|gb|ADQ40995.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 864
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L +RV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 -DPRKPIGTFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G ++E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIII 769
>gi|312622269|ref|YP_004023882.1| ATP-dependent chaperone clpb [Caldicellulosiruptor kronotskyensis
2002]
gi|312202736|gb|ADQ46063.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor kronotskyensis
2002]
Length = 864
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L +RV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 -DPRKPIGTFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G ++E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIII 769
>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
Length = 860
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IAEV SK TGIP E+ +R++ RL RV GQ++A++ + A+ + A
Sbjct: 534 VDDEDIAEVISKWTGIPVRKMLESEREKLVRMEDRLAMRVIGQDEALEAVSNAVRR---A 590
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ G+ R +G F+F GP GK ELAKA+A ++ D++ ++ DM Y E ++
Sbjct: 591 RSGMQDPNRPIGSFIFMGPTGVGKTELAKALAEFIF---DSEQAMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD+IEKA+ + N+LL+IL D R
Sbjct: 648 RLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEIEKAHPEVFNVLLQIL--DDGRMTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT---ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E+ ++ RV E + FKP L +D+ ++
Sbjct: 706 HGRTVDFKNTIIIMTSNVGSQWIQELGISRRKEMEERVTEALKASFKPEFLNRIDETII 764
>gi|126453997|ref|YP_001066525.1| clpB protein [Burkholderia pseudomallei 1106a]
gi|167815415|ref|ZP_02447095.1| ClpB heat-shock protein [Burkholderia pseudomallei 91]
gi|167823825|ref|ZP_02455296.1| ClpB heat-shock protein [Burkholderia pseudomallei 9]
gi|167845366|ref|ZP_02470874.1| ClpB heat-shock protein [Burkholderia pseudomallei B7210]
gi|217421888|ref|ZP_03453392.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|226197488|ref|ZP_03793065.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237812581|ref|YP_002897032.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242314296|ref|ZP_04813312.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|254179519|ref|ZP_04886118.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|254197201|ref|ZP_04903623.1| clpB protein [Burkholderia pseudomallei S13]
gi|403518952|ref|YP_006653085.1| clpB protein [Burkholderia pseudomallei BPC006]
gi|418382969|ref|ZP_12966888.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|418553114|ref|ZP_13117952.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|126227639|gb|ABN91179.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106a]
gi|169653942|gb|EDS86635.1| clpB protein [Burkholderia pseudomallei S13]
gi|184210059|gb|EDU07102.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|217395630|gb|EEC35648.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|225930867|gb|EEH26877.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237506453|gb|ACQ98771.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242137535|gb|EES23937.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|385372048|gb|EIF77180.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|385376808|gb|EIF81443.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|403074594|gb|AFR16174.1| clpB protein [Burkholderia pseudomallei BPC006]
Length = 865
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 195/420 (46%), Gaps = 63/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D +E+DK
Sbjct: 361 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I+ E++ E ++ +++
Sbjct: 419 LIQLKIEREAVKKEPDEASQKRLAL--IEEEIERLGREYADLDEIWTAEKAAVQGSAQLK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARV-----------HGKFKEKL---A 168
E D + + +R K+ L Q++AR+ H + +L
Sbjct: 477 EEIDKVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQ 536
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGSPQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|387888298|ref|YP_006318596.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|414595937|ref|ZP_11445541.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
gi|386923131|gb|AFJ46085.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|403193094|dbj|GAB83193.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
Length = 858
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 199/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q ++++ D +S+ L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALRKEADEASKK-RLDMLEEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+R D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRNGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ +L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVSRMMESERDKLLRMEEQLHDRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L+ R +G FLF GP GK EL KA+AN ++ D+D+ +I DM + E S+
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMIRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG V EV F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELNYGSMKDLVLEVVSHNFRPEFINRIDEVVV 762
>gi|53719118|ref|YP_108104.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|254189090|ref|ZP_04895601.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|157936769|gb|EDO92439.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
Length = 876
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 195/420 (46%), Gaps = 63/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D +E+DK
Sbjct: 372 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRR 429
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E + KE + S + L I+ E++ E ++ +++
Sbjct: 430 LIQLKIEREAVKKEPDEASQKRLAL--IEEEIERLGREYADLDEIWTAEKAAVQGSAQLK 487
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARV-----------HGKFKEKL---A 168
E D + + +R K+ L Q++AR+ H + +L
Sbjct: 488 EEIDKVRADIARLQREGKLEKVAELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQ 547
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 548 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 606
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 607 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 661
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 662 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 719
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M + + + F+P L +D +VV
Sbjct: 720 QGRTVDFKNTVIVMTSNL-GSQLIQSMSGSPQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 778
>gi|222529497|ref|YP_002573379.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor bescii DSM 6725]
gi|222456344|gb|ACM60606.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor bescii DSM 6725]
Length = 864
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L +RV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 -DPRKPIGTFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G ++E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIII 769
>gi|389696003|ref|ZP_10183645.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
gi|388584809|gb|EIM25104.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
Length = 873
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 190/416 (45%), Gaps = 55/416 (13%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E+ H ++I D AL A+ ++ R L ++ ID++ + R D +ELD
Sbjct: 359 EQHHGVRITDSALVAAATLSN--RYITDRFLPDKAIDLVDEASSRLRMQVDSKPEELDNI 416
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
+ R +E E L KE TD +S+ L ++ EL D E + R + E D +
Sbjct: 417 DREIVRLKIEQEALKKE-TDTASKD-RLERLSKELAD-LEEQSDAITTRWKAEKDKLGTA 473
Query: 139 -------------VHDAKRVKDYSKI--------------LDQIDARVHGKFKEKLAVDV 171
+ A+R D++K L +++AR G + AV
Sbjct: 474 ADLKKKLEEARNQLAAAQRGGDWAKAGELSYGVIPGLEKQLSEVEARADGGGLMEEAVTP 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
+ +A+V S+ TG+P E+ + ++ L KRV GQ +A+ + A+ + +A +
Sbjct: 534 DHVAQVVSRWTGVPVDKMLEGEREKLLHMEQDLAKRVVGQAEAVTAVSTAVRRARAGLQ- 592
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF- 290
R +G F+F GP GK EL KA+A+ L+ D++ L+ DM Y E S+
Sbjct: 593 -DPNRPIGSFMFLGPTGVGKTELTKALASFLF---DDETALVRIDMSEYMEKHSVARLIG 648
Query: 291 -----------DSLAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+L V++RPY VVLFD+IEKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDE----QVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NTLIIMTS+L E Q A V V S F+P L +D++++
Sbjct: 707 VDFRNTLIIMTSNLGAEYLVNQPEGQDTDAVRDEVMSVVRSHFRPEFLNRVDEIIL 762
>gi|402840625|ref|ZP_10889087.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
gi|423104334|ref|ZP_17092036.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
gi|376382906|gb|EHS95635.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
gi|402285341|gb|EJU33827.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
Length = 857
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASIK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQSFRPEFINRIDEVVV 762
>gi|409417475|ref|ZP_11257524.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
sp. HYS]
Length = 854
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKAENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ +A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 SLLHERVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSSQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + GS F+P + +D++VV +
Sbjct: 736 RAAVMDAVGSHFRPEFINRIDEVVVFE 762
>gi|389817442|ref|ZP_10208129.1| chaperone clpB [Planococcus antarcticus DSM 14505]
gi|388464566|gb|EIM06896.1| chaperone clpB [Planococcus antarcticus DSM 14505]
Length = 713
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 195/412 (47%), Gaps = 53/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ A R L ++ ID++ + D +ELD+
Sbjct: 214 HAVRIHDRAIVAAA--AMSDRYITERFLPDKAIDLIDEACAMIRTEIDSMPQELDEVTRR 271
Query: 82 LRRAVVEYEQLVKEDTDHSS-RSFWLRQIDNELKDAFFELVS------------------ 122
L + +E + L+KE + S R LR+ +L+D+ + +
Sbjct: 272 LMQLEIEEQALMKEKDEASKIRLKTLREEITDLRDSSAGMKNQWTEEKESLKKIQEKRER 331
Query: 123 FVKLRMQVE-----YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+ R Q+E YD + V ++ + K L ++A + E+L V EEI
Sbjct: 332 LDQFRRQLEDAENRYDLNAAAVLQHGKIPELEKELVALEADLEKGGAERLLREEVTEEEI 391
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
A + + TGIP + E+ +R+ LK+RV GQ+ A++++ EA+ + +A K
Sbjct: 392 AGIVGRWTGIPVTKLVEGEREKLLRLDETLKERVIGQDKAVELVTEAVWRARAGIK--DE 449
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R+ +G F+F GP GK ELAK++A L+D+ D H I DM Y E S+ +
Sbjct: 450 RKPIGSFIFLGPTGVGKTELAKSLAANLFDSED---HFIRIDMSEYMEKHSVSRLIGAPP 506
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++ PYSVVL D+IEKA+ + N+LL+IL D R +
Sbjct: 507 GYIGYEEGGQLTEAVRRNPYSVVLLDEIEKAHPDVANILLQIL--DDGRITDSQGRLVNF 564
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
+NT++IMTS++ + + ++ + + V G L FKP LL +D +V+
Sbjct: 565 SNTVVIMTSNIGSAYINDT--SSEHDIEDIVMGELRRHFKPELLNRIDDIVI 614
>gi|170756703|ref|YP_001780063.1| clpB protein [Clostridium botulinum B1 str. Okra]
gi|387816648|ref|YP_005676992.1| clpb protein [Clostridium botulinum H04402 065]
gi|429244312|ref|ZP_19207779.1| clpb protein [Clostridium botulinum CFSAN001628]
gi|169121915|gb|ACA45751.1| clpB protein [Clostridium botulinum B1 str. Okra]
gi|322804689|emb|CBZ02241.1| clpb protein [Clostridium botulinum H04402 065]
gi|428758693|gb|EKX81098.1| clpb protein [Clostridium botulinum CFSAN001628]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|32265608|ref|NP_859640.1| ATP-dependent Clp protease ClpA [Helicobacter hepaticus ATCC 51449]
gi|54035810|sp|Q7VJY3.1|CLPB_HELHP RecName: Full=Chaperone protein ClpB
gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Helicobacter hepaticus ATCC 51449]
Length = 859
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 207/433 (47%), Gaps = 57/433 (13%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
+LE H + I D AL A++++ R L ++ ID++ + + EL
Sbjct: 355 NLEAHHNVNITDAALVAAAKLSS--RYITDRFLPDKAIDLIDEAAAELKMQIESEPLELS 412
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVS-----------FVK 125
K K + VE + L E T+ + +ID EL++ E +S F +
Sbjct: 413 KIKKHIANLEVEKQALNMEKTNVNEARVL--EIDKELENLREEKMSLEGKFEQEKSVFTR 470
Query: 126 L-RMQVEYDDFVSCVHDAKRVKDYSKI----------LDQIDARVHGKFKE--------K 166
+ ++ E D AKR DY+K + +A +H +++E K
Sbjct: 471 IATIKAELDSLKRESELAKRSGDYNKAAEIDYGKIPDIQAQEAALHKQWEEMQQNGTLLK 530
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
AV E IA V S+ +GIP +ER + ++ L K V GQ+DAI I A+ + K
Sbjct: 531 NAVTQESIAGVVSRWSGIPIKKMLQSQKERILGIESELAKSVVGQDDAIKAIARAIKRNK 590
Query: 227 AAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
A GL+ + R +G FLF GP GK + AK +A L+DN + L+ DM Y E +
Sbjct: 591 A---GLNDASRPIGSFLFLGPTGVGKTQCAKTLAEFLFDNAKS---LVRIDMSEYMEKHA 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYS+VLFD++EKA+ + N+LL++L D
Sbjct: 645 VSRLVGAPPGYVGYEEGGVLTEAIRRKPYSIVLFDEVEKAHPDVFNILLQVL-DDGRLTD 703
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR-VNEVTGSLFKPSLLKLLDKLVVI 392
++G+ + D +NT+II+TS++ +++ E+ + V E FKP L LD +VV
Sbjct: 704 SKGV-SVDFSNTIIILTSNIASDKIMEIGDKQERQKAVKEALKMYFKPEFLNRLDDVVVF 762
Query: 393 DLAVPLLDTTRLL 405
+ + L D T+++
Sbjct: 763 N-PLGLADITQIV 774
>gi|226947643|ref|YP_002802734.1| clpB protein [Clostridium botulinum A2 str. Kyoto]
gi|226841508|gb|ACO84174.1| clpB protein [Clostridium botulinum A2 str. Kyoto]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|126442131|ref|YP_001059258.1| ATPase AAA [Burkholderia pseudomallei 668]
gi|167719228|ref|ZP_02402464.1| ATPase AAA-2 [Burkholderia pseudomallei DM98]
gi|167893910|ref|ZP_02481312.1| ATPase AAA-2 [Burkholderia pseudomallei 7894]
gi|167918626|ref|ZP_02505717.1| ATPase AAA-2 [Burkholderia pseudomallei BCC215]
gi|126221624|gb|ABN85130.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 668]
Length = 865
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M ++ + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGSSQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|168177755|ref|ZP_02612419.1| clpB protein [Clostridium botulinum NCTC 2916]
gi|182671320|gb|EDT83294.1| clpB protein [Clostridium botulinum NCTC 2916]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|153931423|ref|YP_001382793.1| clpB protein [Clostridium botulinum A str. ATCC 19397]
gi|153935231|ref|YP_001386344.1| clpB protein [Clostridium botulinum A str. Hall]
gi|152927467|gb|ABS32967.1| clpB protein [Clostridium botulinum A str. ATCC 19397]
gi|152931145|gb|ABS36644.1| clpB protein [Clostridium botulinum A str. Hall]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|312897982|ref|ZP_07757391.1| ATP-dependent chaperone protein ClpB [Megasphaera micronuciformis
F0359]
gi|310620907|gb|EFQ04458.1| ATP-dependent chaperone protein ClpB [Megasphaera micronuciformis
F0359]
Length = 873
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 22/265 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IA+V S+ TGIP + T E+ + + L +RV GQ++A+ V+ +A+ + +A
Sbjct: 546 VSEEDIAQVVSRWTGIPVTKMMTGEREKLLHLDDTLHQRVVGQDEAVRVVSDAIMRARAG 605
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELAKA+A L+ D+D +++ DM Y E ++
Sbjct: 606 IK--DPNRPIGSFIFLGPTGVGKTELAKALAESLF---DDDRNIVRIDMSEYMEKHTVSR 660
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++ PYSV+L D+IEKA+ I N+LL+IL D R
Sbjct: 661 LIGAPPGYVGYDEGGQLTEAVRRHPYSVILLDEIEKAHPDIFNVLLQIL--DDGRLTDGK 718
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR-VNEVTGSLFKPSLLKLLDKLVVIDL- 394
+ NT+IIMTS+L ++ E T + V ++ S F+P L +D +VV
Sbjct: 719 GRVVNFKNTVIIMTSNLGSHEILEAADFETAEKSVKDILKSYFRPEFLNRIDDIVVFKAL 778
Query: 395 -AVPLLDTTRLLLREWACEETKRRN 418
+ D R+LL + K+ N
Sbjct: 779 KKEQVFDIARILLEHLSNRLQKQMN 803
>gi|294669705|ref|ZP_06734772.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308618|gb|EFE49861.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 857
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEAVMEEVKAYFRPEMINRIDEVVV 763
>gi|253990664|ref|YP_003042020.1| chaperone clpb [Photorhabdus asymbiotica]
gi|253782114|emb|CAQ85278.1| chaperone clpb [Photorhabdus asymbiotica]
Length = 857
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 129/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP + +++ +R++ L KRV GQN+A+D + A+ + +A GL
Sbjct: 535 EIAEILARWTGIPVARMLESEKDKLLRMEQELHKRVIGQNEAVDAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN L+D++D ++ DM + E ++
Sbjct: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA---MVRIDMSEFMEKHAVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + ++ + F+P + +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSDMIQERFGGLNYGEMKDMVMGIVSHHFRPEFINRIDEVVV 762
>gi|383318057|ref|YP_005378899.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
gi|379045161|gb|AFC87217.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
Length = 860
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 66/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYIPDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE------------LVSFVKLRMQ 129
L + ++ E L KE + S R + D + ++ F L K++ Q
Sbjct: 419 LIQLKIQREMLRKEKDEESRRRLADLESDIDTEERVFSDLNEVWKSEKAALQGTTKVKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY++ + +I + +++LA V EE
Sbjct: 479 IEAARL--ALETAQRQQDYAR-MSEIQYGTLPELEKQLAAAQAAETQDFKLVQDRVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV ++ TGIP + E+ + ++ L +RV GQ++A+ + +A+ + A+ GLS
Sbjct: 536 IAEVVARWTGIPVAKMLEGEREKLLHMEQVLHERVVGQDEAVRAVSDAIRR---ARAGLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A+ L+D D ++ DM + E S+ +
Sbjct: 593 DPNRPYGSFLFLGPTGVGKTELCKALADFLFDTQD---AMVRIDMSEFMEKHSVSRLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYE---------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + E V + A+ V V + F+P + LD+LVV
Sbjct: 708 DFRNTVIVMTSNLGSSLIQEQAGDSEADYVQMKAS---VLGVVQAHFRPEFINRLDELVV 764
>gi|330817193|ref|YP_004360898.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
gi|327369586|gb|AEA60942.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
Length = 865
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGTEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVIGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ + V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQSMVGSPQEVVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|349611011|ref|ZP_08890327.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
gi|419797400|ref|ZP_14322885.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
gi|348615041|gb|EGY64573.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
gi|385698231|gb|EIG28607.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
Length = 857
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEAVMEEVKAYFRPEMINRIDEVVV 763
>gi|148378412|ref|YP_001252953.1| ClpA-type chaperone [Clostridium botulinum A str. ATCC 3502]
gi|148287896|emb|CAL81962.1| heat shock protein [Clostridium botulinum A str. ATCC 3502]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|386838314|ref|YP_006243372.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098615|gb|AEY87499.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791606|gb|AGF61655.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 879
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 202/424 (47%), Gaps = 63/424 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVKIQDTALVSAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE TD +SR+ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEEAALSKE-TDAASRT-RLEELRKELADLRGEADAKRAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK---RVKDYSKI-------LDQIDARVHGKFKEKLAVDV------- 171
Q + H+A+ R D ++ L ++ R+ + +E+LAV
Sbjct: 478 QELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLKAE-EEQLAVKQGQNRLLR 536
Query: 172 -----EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
EEIAE+ + TGIP + E+ +R+ L++RV GQ++A+ ++ +A+ + +
Sbjct: 537 EVVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVADAIIRAR 596
Query: 227 AAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
+ + RR +G F+F GP GK ELAK +A L+D+ +N ++ DM Y E ++
Sbjct: 597 SGIR--DPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEEN---MVRLDMSEYQERHTV 651
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSVVLFD+IEKA++ + N LL++L D R
Sbjct: 652 SRLMGAPPGYIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQVL--DDGRITD 709
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+IIMTS++ E + E+ A + E+ G F+P L +D
Sbjct: 710 SQGRTVDFRNTVIIMTSNIGSEYLLDGATAEGEIKPDARALVMGELRGH-FRPEFLNRVD 768
Query: 388 KLVV 391
+V+
Sbjct: 769 DIVL 772
>gi|261364438|ref|ZP_05977321.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
gi|288567348|gb|EFC88908.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
Length = 857
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEAVMEEVKAYFRPEMINRIDEVVV 763
>gi|167383345|ref|XP_001736499.1| heat shock protein [Entamoeba dispar SAW760]
gi|165901109|gb|EDR27269.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 131/246 (53%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M ++ L KRV GQN+A+ + +A+ +
Sbjct: 531 LQVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMNLEEELHKRVIGQNEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTIVIMTSNLGSEIIMKGV--ETEGQVSRKVKETVMEIVKKTFKPEFLNR 760
Query: 386 LDKLVV 391
LD ++V
Sbjct: 761 LDDIIV 766
>gi|52425838|ref|YP_088975.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 856
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 195/416 (46%), Gaps = 61/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------ 126
L R +++ +Q +K++ D +SR L ++ EL + E ++
Sbjct: 415 LDRRIIQLKLEQQALKKEEDEASRK-RLDMLEKELSEKEREYAELEEVWKSEKAALSGTQ 473
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLAVDV--------------- 171
++ E + + + A+R D +K+ + + K+ A D
Sbjct: 474 HIKAELESARTQMEQARRAGDLNKMSELQYGTIPALEKQLAAADSAEGKEMSLLRNRVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA+V S+ TGIP S +E+ +R++ L KRV GQ +A++ + A+ + +A G
Sbjct: 534 EEIAQVLSRATGIPVSRMMEGEKEKLLRMEEELHKRVIGQGEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D++N ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DDENAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E G V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQENKDLGYEGMKEIVMSVVGQHFRPEFINRIDETVV 761
>gi|167539748|ref|XP_001741332.1| heat shock protein [Entamoeba dispar SAW760]
gi|165894033|gb|EDR22117.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 132/246 (53%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M+++ L KRV GQN+A+ + +A+ +
Sbjct: 531 LQVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTIVIMTSNLGSEIIMKGV--ETEGQVSRKVKETVMEIVKKTFKPEFLNR 760
Query: 386 LDKLVV 391
LD ++V
Sbjct: 761 LDDIIV 766
>gi|71908340|ref|YP_285927.1| ATPase AAA [Dechloromonas aromatica RCB]
gi|71847961|gb|AAZ47457.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica
RCB]
Length = 863
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 127/243 (52%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ RL KRV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGEREKLLNMEDRLHKRVVGQDEAVRLVGDAIRRSRA- 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A ++D D HLI DM + E S+
Sbjct: 593 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAEFMFDAED---HLIRIDMSEFMEKHSVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y V+ A V + F+P + +D+
Sbjct: 706 QGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYGVIKVAVMAEVK----NYFRPEFINRIDE 761
Query: 389 LVV 391
+VV
Sbjct: 762 VVV 764
>gi|238027045|ref|YP_002911276.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
gi|237876239|gb|ACR28572.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
Length = 865
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ +AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVIGQEEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK E+ KA+A L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTEVCKALAGFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + V + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQSMAGSPQEAVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|187776981|ref|ZP_02993454.1| hypothetical protein CLOSPO_00526 [Clostridium sporogenes ATCC
15579]
gi|187773909|gb|EDU37711.1| ATP-dependent chaperone protein ClpB [Clostridium sporogenes ATCC
15579]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 192/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKERDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPTLQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ++A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQSEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESVRVRVKEALKARFKPEFLNRVDDIIM 770
>gi|170761667|ref|YP_001785749.1| clpB protein [Clostridium botulinum A3 str. Loch Maree]
gi|169408656|gb|ACA57067.1| clpB protein [Clostridium botulinum A3 str. Loch Maree]
Length = 866
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 190/415 (45%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLERELSELKEKDKEMTAKYENEKSHITKIRDLKER 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIRENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESVRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|387813183|ref|YP_005428664.1| ATP-dependent protease [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338194|emb|CCG94241.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 859
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 66/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +++ D A+ A++++ R +L ++ ID++ + + D + LD+ +
Sbjct: 361 HGVEVTDGAIIAAAKLSH--RYITDRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR------SFWLRQIDNELKD-------AFFELVSFVKLRM 128
L + +E E L KE TD +S+ S + ++ E D L K++
Sbjct: 419 LIQLKIEREALKKE-TDAASKKRLEELSAVIGNVEREYADLEEVWNTEKAALHGSQKIKS 477
Query: 129 QVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEE 173
Q+E + +A+R D Y KI + Q+D + E + V EE
Sbjct: 478 QLEQARI--DLENARRAGDLGKMSELQYGKIPELERQLDMASQAEMMEMKLLRNRVTDEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAE+ SK TGIP S ++ MR++ L RV GQ++A++ + A+ + +A GLS
Sbjct: 536 IAEIVSKWTGIPVSKMLEGERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+AN L+ D + ++ DM + E S+ +
Sbjct: 593 DPNRPNGSFLFLGPTGVGKTELCKALANFLF---DTEEAMVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+++MTS+L E+ YE M +A V EV G+ F+P + +D++VV
Sbjct: 708 DFRNTVVVMTSNLGSHIIQEKAGEENYEDMKSA----VMEVVGTHFRPEFINRVDEVVV 762
>gi|115464933|ref|NP_001056066.1| Os05g0519700 [Oryza sativa Japonica Group]
gi|62510680|sp|Q6F2Y7.1|CLPB1_ORYSJ RecName: Full=Chaperone protein ClpB1; AltName: Full=ATP-dependent
Clp protease ATP-binding subunit ClpB homolog 1;
AltName: Full=Casein lytic proteinase B1; AltName:
Full=Heat shock protein 101
gi|18033450|gb|AAL57165.1|AF332981_1 heat shock protein [Oryza sativa Japonica Group]
gi|50080323|gb|AAT69657.1| putative heat shock protein HSP101 [Oryza sativa Japonica Group]
gi|52353699|gb|AAU44265.1| heat shock protein HSP101 [Oryza sativa Japonica Group]
gi|113579617|dbj|BAF17980.1| Os05g0519700 [Oryza sativa Japonica Group]
gi|215740589|dbj|BAG97245.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632258|gb|EEE64390.1| hypothetical protein OsJ_19232 [Oryza sativa Japonica Group]
Length = 912
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 237/488 (48%), Gaps = 75/488 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE+ L KE D +R +++ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +ID A++ + E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEIVIFD 767
Query: 394 LAV--PLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSAL-VHIASNAARKYGQNGEG 450
L RL +++ A +R V + + +AL V ++ + YG
Sbjct: 768 PLSHEQLRKVARLQMKDVAVRLAER------GVALAVTDAALDVILSLSYDPVYG--ARP 819
Query: 451 LKRWMDQR 458
++RW+++R
Sbjct: 820 IRRWIEKR 827
>gi|357060230|ref|ZP_09121003.1| chaperone ClpB [Alloprevotella rava F0323]
gi|355376502|gb|EHG23746.1| chaperone ClpB [Alloprevotella rava F0323]
Length = 866
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 220/477 (46%), Gaps = 74/477 (15%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H+++IQD+AL A++++ R + L ++ ID++ + + RD +ELD+
Sbjct: 356 ENHHKVRIQDDALIAAAQLSH--RYISDRFLPDKAIDLMDEAAAKLRMERDSQPEELDEI 413
Query: 79 KYFLRRAVVEYEQLVKEDTDHSS-----------------RSFWL--RQIDNELKD--AF 117
LR+ +E E + +E+ + R+ W R++ N+++D
Sbjct: 414 TRRLRQLEIEREAIKRENDEQKLAALNKEISELEEREKDFRAKWEGERELLNKIQDNKKQ 473
Query: 118 FELVSFVKLRMQVE--YDDFVSCVHDAKRVKDYSKILDQIDARVHGK------FKEKLAV 169
E + F R + E Y+ + ++K +D I ++H + KE++
Sbjct: 474 MEQLKFEADRAEREGNYEQVAEIRYG--KLKALQDEIDSIQEQLHQRQGAEALVKEEVTP 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
D +IA+V S+ TGIP S E+ + ++G L KRV GQ++AI + +A+ + +A
Sbjct: 532 D--DIADVVSRWTGIPVSRMLQSEREKLVHMEGELHKRVIGQDEAIQAVSDAVRRSRAGL 589
Query: 230 KGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLI-HFDMGNYTELESIKH 288
+ +R +G F+F G GK ELAKA+A L+ ND L+ DM Y E S+
Sbjct: 590 Q--DPKRPIGSFIFLGTTGVGKTELAKALAEYLF----NDETLMTRIDMSEYQEKFSVSR 643
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 644 LVGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVL--DDGRLTDNK 701
Query: 337 IAAFDLTNTLIIMTSDLKD---EQVYEVM-----------LTATYGRVNEVTGSLFKPSL 382
+ NT+IIMTS+L +Q +E M L T V E+ +P
Sbjct: 702 GRVVNFKNTIIIMTSNLGSQFIQQKFEAMRGLPDAKQANILEETKNEVLEMLKKTIRPEF 761
Query: 383 LKLLDKLVVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIAS 438
L +D +++ PL D L++R +R + V P AL+ A
Sbjct: 762 LNRIDDIIMFQ---PLKKDEIELIVRLQVEAVIRRLAEQEVQLTVTPDAIALISEAG 815
>gi|376257936|ref|YP_005145827.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae VA01]
gi|372120453|gb|AEX84187.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae VA01]
Length = 849
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 195/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVSF--------VKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV++ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVAWWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTLETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|206560283|ref|YP_002231047.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|444358706|ref|ZP_21160085.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|444365745|ref|ZP_21165861.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
gi|198036324|emb|CAR52220.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|443603407|gb|ELT71418.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|443605667|gb|ELT73504.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
Length = 865
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKAN + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKANPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMTGSPQDEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|183233250|ref|XP_001913827.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|169801663|gb|EDS89397.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R + ++ + KRV GQ++A+ + +A+ +
Sbjct: 531 LQVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R +G F+F GP+ GK ELAKA+A EL+D+ +N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEEN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L +++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTVVIMTSNLGSEIIMKGV--ETTGQVDEQVKEQVMEIVKKSFKPEFLNR 760
Query: 386 LDKLVV 391
+D ++V
Sbjct: 761 MDDIIV 766
>gi|312881919|ref|ZP_07741682.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370437|gb|EFP97926.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 858
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 195/417 (46%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYISDRQLPDKAIDLIDEAASSIRLQMDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AFFEL------------------ 120
+ + +E + L E S + L ++ EL D AF EL
Sbjct: 419 IIQLKIEQQALTNEHDGASEK--RLINLNQELVDKERAFSELEEVWKAEKAALSGTQHIK 476
Query: 121 VSFVKLRMQVEYDDFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDV 171
+ RM +E F D R+ + Y +I + Q+D + +E K V
Sbjct: 477 TELEQARMDME---FARRAGDLNRMSELQYGRIPELERQLDLAAQAEMQEMTLLKNKVSD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIA+V SK TGIP S + + +R++ L RV GQ++A++V+ A+ + +A G
Sbjct: 534 NEIADVLSKQTGIPVSKMLEAEKVKLLRMEEVLHDRVIGQSEAVEVVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS + +G FLF GP GK EL K +AN L+ D++ ++ DM + E S+
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFLF---DSETAMVRIDMSEFMEKHSVARLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E T Y +V EV G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSSRIQEGFATTNYQQMKEKVMEVVGKHFRPEFINRVDESVV 762
>gi|357420426|ref|YP_004933418.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
gi|355397892|gb|AER67321.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
Length = 870
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 25/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIA+V S TGIP S E+ +R++ L +RV GQ++A+ ++ +A+ + ++
Sbjct: 538 VTEEEIAKVVSMWTGIPVSRLMEGEREKLLRLEEVLHQRVVGQDEAVKLVADAVLRARSG 597
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K RR +G F+F GP GK ELAK +A L+D+ DN LI DM Y E ++
Sbjct: 598 IK--DPRRPIGSFIFLGPTGVGKTELAKTLAEALFDSEDN---LIRIDMSEYMEKHAVSR 652
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 653 LIGAPPGYVGYEEGGQLTERVRRKPYSVILFDEIEKAHQDVFNILLQVL--DDGRLTDSH 710
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTA---TYGRVNEVTGSL---FKPSLLKLLDKLV 390
D NT+IIMTS++ + E + + T NEVT L F+P L +D +V
Sbjct: 711 GRTVDFRNTIIIMTSNIGATALMEGITESGEITEEARNEVTRQLRLHFRPEFLNRVDDVV 770
Query: 391 V 391
+
Sbjct: 771 L 771
>gi|284007736|emb|CBA73548.1| protein disaggregation chaperone [Arsenophonus nasoniae]
Length = 863
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S E+ + ++ L KRV GQN+A+D + A+ + +A GL
Sbjct: 541 EIAEILARWTGIPVSRMLESEREKLLHMEQDLHKRVIGQNEAVDAVSNAIRRSRA---GL 597
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E ++
Sbjct: 598 SDPNRPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHTVSRLVG 654
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++RPYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 655 APPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRT 712
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E + Y V EV F+P + +D++VV
Sbjct: 713 VDFRNTVVIMTSNLGSDLIQERFGSLGYNEMKEIVMEVVSRSFRPEFINRIDEVVV 768
>gi|67473761|ref|XP_652630.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|183233638|ref|XP_001913888.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|183235644|ref|XP_001914274.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|56469501|gb|EAL47244.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|169800435|gb|EDS88950.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|169801477|gb|EDS89337.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R + ++ + KRV GQ++A+ + +A+ +
Sbjct: 531 LQVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R +G F+F GP+ GK ELAKA+A EL+D+ +N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEEN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L +++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTVVIMTSNLGSEIIMKGV--ETTGQVDEQVKEQVMEIVKKSFKPEFLNR 760
Query: 386 LDKLVV 391
+D ++V
Sbjct: 761 MDDIIV 766
>gi|402496847|ref|YP_006556107.1| ATP-binding subunit of Clp protease and DnaKDnaJ chaperones
[Wolbachia endosymbiont of Onchocerca ochengi]
gi|398650120|emb|CCF78290.1| ATP-binding subunit of Clp protease and DnaKDnaJ chaperones
[Wolbachia endosymbiont of Onchocerca ochengi]
Length = 853
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IA + SK TGIP +E+ + ++ + KRV GQ DAI+ I A+ + ++ +
Sbjct: 534 DIANIVSKWTGIPVDSMMHSEKEKLLSMENEIGKRVVGQKDAIEAISNAVRRSRSGVQ-- 591
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ R G FLF GP GK ELAK +A L+DN + FDM Y E SI +
Sbjct: 592 DTNRPFGSFLFLGPTGVGKTELAKVLAEFLFDNQGTP---LRFDMSEYMEKHSISKLIGA 648
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY V+LFD+IEKAN I NLLL++L D R
Sbjct: 649 PPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQVL--DEGRLTDSHGKLI 706
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + + + V ++ S F+P L LD++++
Sbjct: 707 DFRNTILILTSNLGAEIMLKGVADSIKSEVMQIVKSAFRPEFLNRLDEIII 757
>gi|395237740|ref|ZP_10415770.1| Chaperone protein [Turicella otitidis ATCC 51513]
gi|423351450|ref|ZP_17329101.1| chaperone ClpB [Turicella otitidis ATCC 51513]
gi|394486944|emb|CCI83858.1| Chaperone protein [Turicella otitidis ATCC 51513]
gi|404386509|gb|EJZ81665.1| chaperone ClpB [Turicella otitidis ATCC 51513]
Length = 854
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 193/414 (46%), Gaps = 63/414 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + + D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAAELSD--RYITSRFLPDKAIDLVDEAASQLRMEIDSSPQEVDEAERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL---------RMQVEY 132
+RR +E L KE TD +S+ L ++ EL D +L R++
Sbjct: 421 VRRLEIEEVALEKE-TDDASKE-RLGKLREELADEREKLAELKARWSNEKGAIDRVRRAK 478
Query: 133 DDFVSCVHDAKRVK---DYSKI--------------LDQIDARVHGKFKEKLAVDV--EE 173
+D HD++R + DY K+ +D + V G + L +V +
Sbjct: 479 EDLEQLRHDSERAERDGDYGKVAELRYGRIPEAEKEVDAAEKEVSGANEGMLTEEVTPDT 538
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA V S TGIPA E+ +R++ L +R+ GQ +A+ + +A+ + +A
Sbjct: 539 IAGVVSAWTGIPAGKMLEAETEKLLRMEEELGRRIVGQREAVTAVSDAVRRARAGVA--D 596
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK ELAKA+A L+D+ + ++ DM Y E S+ +
Sbjct: 597 PNRPTGSFLFLGPTGVGKTELAKALAEFLFDD---ERAMVRIDMSEYGEKHSVARLVGAP 653
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 PGYVGYDAGGQLTEAVRRRPYTVVLFDEVEKAHPEVFDVLLQVL--DEGRLTDGQGRTVD 711
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR--VNEVTGSLFKPSLLKLLDKLVVID 393
NT++++TS+L A GR V + + FKP + LD +VV D
Sbjct: 712 FRNTILVLTSNLG----------AGGGREEVMQAVKAAFKPEFINRLDDVVVFD 755
>gi|296104261|ref|YP_003614407.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|392980273|ref|YP_006478861.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
dissolvens SDM]
gi|295058720|gb|ADF63458.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|392326206|gb|AFM61159.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 857
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 201/417 (48%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKD---AFFELVSFVKLR-------- 127
L R +++ +Q +K+++D +S+ L ++ EL D + EL K
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASKK-RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDV 171
++ E + + A+RV D Y KI + +I + GK L V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + ++ +R++ L +RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSHNFRPEFINRIDEVVV 762
>gi|167389932|ref|XP_001739140.1| heat shock protein [Entamoeba dispar SAW760]
gi|165897287|gb|EDR24500.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 131/246 (53%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M ++ L KRV GQN+A+ + +A+ +
Sbjct: 531 LQVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMNLEEELHKRVIGQNEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTIVIMTSNLGSEIIMKGV--ETEGQVSKKVKETVMEIVKKTFKPEFLNR 760
Query: 386 LDKLVV 391
LD ++V
Sbjct: 761 LDDIIV 766
>gi|429220788|ref|YP_007182432.1| ATP-dependent chaperone ClpB [Deinococcus peraridilitoris DSM
19664]
gi|429131651|gb|AFZ68666.1| ATP-dependent chaperone ClpB [Deinococcus peraridilitoris DSM
19664]
Length = 852
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 197/421 (46%), Gaps = 66/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKR---CLNSRDKYQKELDKH 78
H ++I D AL A+ ++Q R A +L ++ ID++ + R L S + L++
Sbjct: 352 HNVEITDPALVAAATLSQ--RYIADRQLPDKAIDLIDEAAARLRMALESSPEQIDALERR 409
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK-----------L 126
K L +E + L KE D D R L I++ L+ EL S L
Sbjct: 410 KLQLE---IERQALSKEKDEDSQQR---LIDIEDSLRAVTDELGSLRGKWEAERHELHDL 463
Query: 127 RMQVEYDDFV-SCVHDAKRVKDYSKI-------LDQIDARVH--------GKFKEKLAVD 170
R + E D V + + A+R D SK L Q++ V +F + D
Sbjct: 464 RTKREQLDSVRTQIEQAERDYDLSKAAELRYGQLPQLEREVQDLEARLKNAEFAHQEVTD 523
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
E+IA + ++ TGIP S E+ +R++ L +RV GQ+ AI + +A+ + +A
Sbjct: 524 -EDIAAIVARWTGIPVSRLMEGEREKLLRLEQELHRRVIGQHRAIVSVADAIRRSRA--- 579
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS RR +G F+F GP GK ELAKA+A L+D D ++ DM Y E ++
Sbjct: 580 GLSDPRRPIGSFMFLGPTGVGKTELAKALAAFLFDTEDA---MVRLDMSEYMEKHTVARL 636
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 637 IGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVLLQVL--DDGRLTDGQG 694
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRV--NEVTGSL---FKPSLLKLLDKLVVI 392
D N+L+IMTS++ + E + V G+L F+P L +D ++V
Sbjct: 695 RTVDFRNSLVIMTSNIGSPLILEAQARGDDAETIRSAVMGALSQAFRPEFLNRVDDIIVF 754
Query: 393 D 393
D
Sbjct: 755 D 755
>gi|376243676|ref|YP_005134528.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|372106918|gb|AEX72980.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae CDCE 8392]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|423125257|ref|ZP_17112936.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
gi|376399224|gb|EHT11842.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
Length = 857
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASIK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQSFRPEFINRIDEVVV 762
>gi|375293913|ref|YP_005128453.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae INCA 402]
gi|371583585|gb|AEX47251.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae INCA 402]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKCAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|183235698|ref|XP_001914289.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|169800404|gb|EDS88935.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R + ++ + KRV GQ++A+ + +A+ +
Sbjct: 531 LQVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R +G F+F GP+ GK ELAKA+A EL+D+ +N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEEN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L +++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTVVIMTSNLGSEIIMKGV--ETTGQVDEQVKEQVMEIVKKSFKPEFLNR 760
Query: 386 LDKLVV 391
+D ++V
Sbjct: 761 MDDIIV 766
>gi|339482101|ref|YP_004693887.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
gi|338804246|gb|AEJ00488.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
Length = 871
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L RV GQ++A+ ++ +A+ + +A
Sbjct: 542 VGAEEIAEVVSRATGIPVSKMMQGEREKLLLMEQKLHDRVVGQDEAVRLVSDAIRRSRA- 600
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 601 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEFMEKHSVA 655
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L +V+++PY+V+L D++EKA+ + N+LL++L D R
Sbjct: 656 RLIGAPPGYVGYEEGGYLTEIVRRKPYAVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 713
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+I+MTS+L + + E M + Y + E V G + F+P + +D++VV
Sbjct: 714 QGRTVDFKNTVIVMTSNLGSQMIQE-MSGSEYQAIKEAVMGEVKTHFRPEFINRIDEVVV 772
>gi|42520119|ref|NP_966034.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|54035774|sp|Q73IE4.1|CLPB_WOLPM RecName: Full=Chaperone protein ClpB
gi|42409856|gb|AAS13968.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 853
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 125/235 (53%), Gaps = 19/235 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IA + SK TGIP +E+ + ++ + +RV GQ DAI+ I A+ + ++
Sbjct: 530 VTGDDIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSG 589
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ + + G FLF GP GK ELAKA+A L+D+ + L+ FDM Y E S+
Sbjct: 590 VQ--DTNKPFGSFLFLGPTGVGKTELAKALAEFLFDDQ---SALLRFDMSEYMEKHSVSK 644
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPY V+LFD+IEKAN I NLLL+IL D R
Sbjct: 645 LIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQIL--DEGRLTDSH 702
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + + + V ++ S F+P L LD++++
Sbjct: 703 GKLIDFRNTILILTSNLGAEIMLKGNVDSVRNEVMQIVKSAFRPEFLNRLDEIII 757
>gi|410084770|ref|ZP_11281491.1| ClpB protein [Morganella morganii SC01]
gi|409768415|gb|EKN52475.1| ClpB protein [Morganella morganii SC01]
Length = 812
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 197/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R L ++ ID++ + D + LD+
Sbjct: 316 HHVQITDPAIVAAATLSH--RYITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLDRR 373
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+ + +E + L KE D S + L ++ EL + E S + ++
Sbjct: 374 IIQLKLEQQALKKESDDASKKR--LDMLEQELTEKEREYASLEEEWKAEKATLSGTQHIK 431
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE-KL----AVDVEE 173
E + + + A+R D +K+ + Q+ A + KE KL DVE
Sbjct: 432 AELEQAKTALEQARRTGDLTKMSELQYGKIPELEKQLAAANAAEDKEMKLLRNKVTDVE- 490
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAE+ ++ TGIP S E+ +R++ + RV GQ++A+D + A+ + +A GLS
Sbjct: 491 IAEILARWTGIPVSRMLEGEREKLLRMEQVMHSRVIGQDEAVDAVANAIRRSRA---GLS 547
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL KA+A+ L+D++D ++ DM + E S+ +
Sbjct: 548 DPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDA---MVRIDMSEFMEKHSVARLIGA 604
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 605 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 662
Query: 341 DLTNTLIIMTSDLKDEQVY----EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L +++ E+ A G V EV F+P + +D++VV
Sbjct: 663 DFRNTVVIMTSNLGSDRIQEHFGELNYDAMKGAVMEVVSHHFRPEFINRIDEVVV 717
>gi|389781121|ref|ZP_10194528.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
gi|388435401|gb|EIL92308.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
Length = 863
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 199/421 (47%), Gaps = 65/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSN--RYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK---------LRMQVE 131
L + ++ E L KE D++ R L ++L+ F +L K R++ +
Sbjct: 419 LIQLKIQREMLKKEKDSESKQRLADLETDIDKLEREFSDLNEIWKSEKASLQGTTRVKEQ 478
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---KLA----------------VDVE 172
+ + A+R +DY+K + +I +GK E +LA V E
Sbjct: 479 IEQAHQELESAQRRQDYAK-MSEIQ---YGKLPELEKQLAAAQAAETQDFKLVQTKVTAE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP S ++ ++++ L KRV GQ++A+ + +A+ + +A GL
Sbjct: 535 EIAEVVARWTGIPVSKMLEGERDKLLKMEDELHKRVVGQDEAVHAVADAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+A ++D D ++ DM + E S+
Sbjct: 592 SDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVY---------EVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+I+MTS+L + + E T V V + F+P + LD++V
Sbjct: 707 VDFRNTVIVMTSNLGSQMIQDASENGGDAEEQYTQMKASVMGVVQAHFRPEFINRLDEIV 766
Query: 391 V 391
V
Sbjct: 767 V 767
>gi|187923803|ref|YP_001895445.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
gi|187714997|gb|ACD16221.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
Length = 865
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLQIEEKLHARVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A+ L+D+ D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALASFLFDSED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ A V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQSMVGEPQEAVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|410696680|gb|AFV75748.1| ATP-dependent chaperone ClpB [Thermus oshimai JL-2]
Length = 854
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 194/414 (46%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + R + + +E+D +
Sbjct: 352 HGVRISDSALIAAATLSH--RYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERR 409
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFV-----------KLR-M 128
+ +E E L KE D + +R L+ I+ E+ E+ + +LR
Sbjct: 410 KLQLEIEREALKKEKDPEAQTR---LKAIEEEIGKLAQEIATLRAEWEKEREVLRRLREA 466
Query: 129 QVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE-------KLAVDVEEI 174
Q D+ + A+R D ++ L +++A V +E +L V E+I
Sbjct: 467 QQRLDEVRRQIELAERQYDLNRAAELRYGELPKLEAEVEALSQELKGARFVRLEVTEEDI 526
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
AE+ S+ TGIP S E+ +R++ L KRV GQ++AI + +A+ + +A K
Sbjct: 527 AEIVSRWTGIPVSRLLEGEREKLLRLEDELHKRVVGQDEAIRAVADAIRRARAGLK--DP 584
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK ELAK +A L+D + ++ DM Y E ++ +
Sbjct: 585 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEA---MVRIDMTEYMEKHAVSRLIGAPP 641
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPY+V+LFD+IEKA+ + NLLL+IL D R D
Sbjct: 642 GYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQIL--DDGRLTDSHGRTVDF 699
Query: 343 TNTLIIMTSDLKDEQVYEVM-----LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+II+TS+L + E + A RV F+P L LD++V+
Sbjct: 700 RNTVIILTSNLGSPLILEGLQQGLPYEAIRDRVFRELQRHFRPEFLNRLDEIVL 753
>gi|183235400|ref|XP_001914216.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800573|gb|EDS89008.1| hypothetical protein EHI_005657 [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 27/244 (11%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R + ++ + KRV GQ++A+ + +A+ +
Sbjct: 531 LQVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R +G F+F GP+ GK ELAKA+A EL+D+ +N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEEN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L +++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L E + + + T +V E+ FKP L +D
Sbjct: 703 DGRGRTVDFKNTVVIMTSNLGSEIIMKGVETTGQVKEEVKEQVMEIVKKSFKPEFLNRMD 762
Query: 388 KLVV 391
++V
Sbjct: 763 DIIV 766
>gi|38234653|ref|NP_940420.1| ATP-dependent protease regulatory subunit, ClpB [Corynebacterium
diphtheriae NCTC 13129]
gi|54035766|sp|Q6NF05.1|CLPB_CORDI RecName: Full=Chaperone protein ClpB
gi|38200917|emb|CAE50634.1| Putative ATP-dependent protease regulatory subunit, ClpB
[Corynebacterium diphtheriae]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|334880447|emb|CCB81184.1| chaperone protein ClpB [Lactobacillus pentosus MP-10]
Length = 867
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 130/244 (53%), Gaps = 29/244 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V ++IA V S++TGIP + E+ + + L +RV GQ+ A+D + +A+ + +A
Sbjct: 532 SVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG F+F GP GK ELAKA+A L+ D D++++ DM Y E ES+
Sbjct: 592 GLQ--DPNRPLGSFMFLGPTGVGKTELAKALAENLF---DADDYMVRIDMSEYMEKESVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PYS+VLFD+IEKA+ + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLK--------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L D+Q + + T+ +V ++ S FKP L +D
Sbjct: 705 QGRTVDFKNTILIMTSNLGSELLLAGVDDQGH--LSDETHSQVMQLVQSRFKPEFLNRID 762
Query: 388 KLVV 391
+++
Sbjct: 763 DIIM 766
>gi|148258937|ref|YP_001243522.1| chaperone clpB [Bradyrhizobium sp. BTAi1]
gi|146411110|gb|ABQ39616.1| Chaperone clpB [Bradyrhizobium sp. BTAi1]
Length = 876
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 206/418 (49%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D +E+D+
Sbjct: 377 HGVRITDGAIVAAATLSN--RYITDRFLPDKAIDLVDEAASRVRMEADSKPEEVDEIDRR 434
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL-----KDAFF---------ELVSFVKLR 127
+ + +E E L KE TD +S+ L+++D E+ K A +L S K++
Sbjct: 435 IIQLKIEREALKKE-TDEASKE-RLKKVDQEIAELEKKSADLTSIWKAEKEKLASVQKIK 492
Query: 128 MQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-----HGK-FKEKLAVDVEEI 174
Q+ D S + +R D ++ I+ Q++ ++ G+ FK++ V EEI
Sbjct: 493 EQL--DQARSELESVQRRGDLTRAGELMYSIIPQLEKKLAETPAQGRMFKQE--VTAEEI 548
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP E+ + ++ +L++RV GQ+ AI V+ +A+ + A+ GL
Sbjct: 549 AEVVSRWTGIPVDKMMEGEREKLLHMEDKLRERVVGQDQAIVVVADAVRR---ARAGLQD 605
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF--- 290
R +G FLF GP GK EL KA+A L+ D++ ++ DM Y E S+
Sbjct: 606 PHRPIGSFLFLGPTGVGKTELCKALAEFLF---DDEQAMVRIDMSEYMEKHSVARLIGAP 662
Query: 291 ---------DSLAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
SL V++RPY V+LFD++EKA+S + N+LL++L D R D
Sbjct: 663 PGYVGYEEGGSLTEAVRRRPYQVILFDEVEKAHSDVFNILLQVL--DDGRLTDGQGRTVD 720
Query: 342 LTNTLIIMTSDLKDEQVYEVML----TATYGR--VNEVTGSLFKPSLLKLLDKLVVID 393
NT+I++TS+L E Y L A R V EV F+P L LD++++ +
Sbjct: 721 FRNTIIVLTSNLGAE--YLAALPEGKPAEEAREQVMEVVRRSFRPEFLNRLDEIILFN 776
>gi|377564982|ref|ZP_09794290.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
gi|377527870|dbj|GAB39455.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
Length = 861
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 138/257 (53%), Gaps = 38/257 (14%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V V +IAEV S+ TGIP S T+ E+ + ++ L RV GQ+ A+ + EA+ + A
Sbjct: 490 VTVMDIAEVVSRQTGIPVSELTTEEREKLLGLENTLHDRVIGQDKAVTAVAEAVRR---A 546
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G FLF GP GK ELAKA+A ++ + D +I FDM + E ++
Sbjct: 547 RAGLSDPNRPIGSFLFLGPTGVGKTELAKALAAAVFGDED---RMIRFDMSEFQEKHNVA 603
Query: 288 HF---------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+D L V+++PYSV+LFD+IEKA+ + N+LL++L + + T
Sbjct: 604 RLVGAPPGYVGYDDAGQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLLD---DGRVTD 660
Query: 336 GIA-AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL-------FKPSLLKLLD 387
G D NTL+IMTS++ +++L A G V +V + F+P L +D
Sbjct: 661 GQGRTVDFKNTLVIMTSNIG----SDLILNAPDGDVEKVVPDVMDLLRQRFRPEFLNRID 716
Query: 388 KLVVIDLAVPLLDTTRL 404
+ VV D LD T+L
Sbjct: 717 ETVVFD----RLDKTQL 729
>gi|421494136|ref|ZP_15941488.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455738463|ref|YP_007504729.1| ClpB protein [Morganella morganii subsp. morganii KT]
gi|400191693|gb|EJO24837.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455420026|gb|AGG30356.1| ClpB protein [Morganella morganii subsp. morganii KT]
Length = 857
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 197/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+ + +E + L KE D S + L ++ EL + E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASKKR--LDMLEQELTEKEREYASLEEEWKAEKATLSGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE-KL----AVDVEE 173
E + + + A+R D +K+ + Q+ A + KE KL DVE
Sbjct: 477 AELEQAKTALEQARRTGDLTKMSELQYGKIPELEKQLAAANAAEDKEMKLLRNKVTDVE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAE+ ++ TGIP S E+ +R++ + RV GQ++A+D + A+ + +A GLS
Sbjct: 536 IAEILARWTGIPVSRMLEGEREKLLRMEQVMHSRVIGQDEAVDAVANAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL KA+A+ L+D++D ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDA---MVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVY----EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L +++ E+ A G V EV F+P + +D++VV
Sbjct: 708 DFRNTVVIMTSNLGSDRIQEHFGELNYDAMKGAVMEVVSHHFRPEFINRIDEVVV 762
>gi|419960229|ref|ZP_14476273.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae GS1]
gi|388604901|gb|EIM34127.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
cloacae GS1]
Length = 857
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 194/414 (46%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE + S + + +++ E K L ++ +
Sbjct: 419 IIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAE 478
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD-----QIDARVHGKFKEKL--AVDVEEI 174
+E + A+RV D Y KI + +I + GK L V EI
Sbjct: 479 LEQAKI--AIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTDAEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP + E+ +R++ L +RV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEVLARWTGIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E ++ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHAVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSQNFRPEFINRIDEVVV 762
>gi|377821024|ref|YP_004977395.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
gi|357935859|gb|AET89418.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
Length = 865
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIESKLHERVIGQDEAIGAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D+ D HL+ DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDSED---HLVRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQGMIGEPQESVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|167379615|ref|XP_001735209.1| heat shock protein [Entamoeba dispar SAW760]
gi|165902897|gb|EDR28604.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 575
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 27/244 (11%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M+++ L KRV GQN+A+ + +A+ + +
Sbjct: 240 LQVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSR 299
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 300 G---GLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 353
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 354 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 411
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L E + + V R V E+ FKP L LD
Sbjct: 412 DGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLD 471
Query: 388 KLVV 391
++V
Sbjct: 472 DIIV 475
>gi|344996166|ref|YP_004798509.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964385|gb|AEM73532.1| LOW QUALITY PROTEIN: AAA ATPase central domain protein
[Caldicellulosiruptor lactoaceticus 6A]
Length = 864
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L +RV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+ D++N++I DM Y E S+
Sbjct: 598 -DPRKPIGTFLFLGPTGVGKTELARALAEALF---DSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + N+LL+I+ D R
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G + E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIGEETRKLIDRELKLHFRPEFLNRLDEIII 769
>gi|312127443|ref|YP_003992317.1| ATP-dependent chaperone clpb [Caldicellulosiruptor hydrothermalis
108]
gi|311777462|gb|ADQ06948.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor hydrothermalis
108]
Length = 864
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA++ SK TGIP + ++ + + L +RV GQ++AI+ + A+ + +A K
Sbjct: 539 EEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARAGIK- 597
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R+ +G FLF GP GK ELA+A+A L+D+ N +I DM Y E S+
Sbjct: 598 -DPRKPIGTFLFLGPTGVGKTELARALAEALFDSESN---MIRIDMTEYMEKHSVSRLIG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+ +PYSVVLFD+IEKA+ + NLLL+I+ D R
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNLLLQIM--DDGRLTDSKGRT 711
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
D NT+IIMTS+L E Y + + G ++E T L F+P L LD++++
Sbjct: 712 VDFKNTIIIMTSNLGSE--YLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEVII 769
>gi|58696668|ref|ZP_00372220.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Drosophila simulans]
gi|58537150|gb|EAL60256.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Drosophila simulans]
Length = 816
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 19/235 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IA + SK TGIP +E+ + ++ + +RV GQ DAI+ I A+ + ++
Sbjct: 493 VTGDDIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSG 552
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ + R G FLF GP GK ELAKA+A L+D+ + L+ FDM Y E S+
Sbjct: 553 VQ--DTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQ---SALLRFDMSEYMEKHSVSK 607
Query: 289 FFDSLAALV------------KKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ V ++RPY V+LFD+IEKAN I NLLL+IL D R
Sbjct: 608 LIGAPPGYVGYEQGGRLTEAARRRPYQVILFDEIEKANPDIFNLLLQIL--DEGRLTDSH 665
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + + + V ++ S F+P L LD++++
Sbjct: 666 GKLIDFRNTILILTSNLGAEIMLKGNVDSVRNEVMQIVKSTFRPEFLNRLDEIII 720
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 198/430 (46%), Gaps = 86/430 (20%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D + +DK +
Sbjct: 359 HGVEITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDF------ 135
+ + +E E + KE D S R + I++ELK ++Q EY+D+
Sbjct: 417 IIQLKIEREAVKKESDDVSKRRLCV--IEDELK------------KIQQEYNDYEKIWKS 462
Query: 136 -VSCVHDAKRVKD-------------------------YSKILD-----------QIDAR 158
+ V K +K+ YSK+ + I+
Sbjct: 463 EKNVVEGTKNIKEEIDSLKAKMAEFQRNGQYDRLAELQYSKLPELEEKLKSAESYSINQS 522
Query: 159 VHGKFKE-KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDV 217
KFK + V EEIAEV S+ TGIP S E+ + + L ++ GQ++A++
Sbjct: 523 SDKKFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLHMSDFLNSKIIGQSEAVNA 582
Query: 218 IFEALTKPKAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFD 276
+ +A+ + +A GLS + R G FLF GP GK ELAKA+A+ ++D+ D H+I D
Sbjct: 583 VSDAILRARA---GLSDQSRPSGSFLFLGPTGVGKTELAKALADFMFDSRD---HMIRID 636
Query: 277 MGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKI 324
M + E S+ + L V+++PYSVVL D++EKA+ + N+LL++
Sbjct: 637 MSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQV 696
Query: 325 LKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT----GSLFKP 380
L D R D NT+IIMTS+L + + M+ TY + +V + +P
Sbjct: 697 L--DDGRLTDSHGRTVDFRNTIIIMTSNLGSNHI-QSMMNDTYDEIRKVVMEELKATLRP 753
Query: 381 SLLKLLDKLV 390
L +D++V
Sbjct: 754 EFLNRIDEIV 763
>gi|376249392|ref|YP_005141336.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC04]
gi|376252160|ref|YP_005139041.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC03]
gi|372113664|gb|AEX79723.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC03]
gi|372115960|gb|AEX82018.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC04]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTLETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|206890329|ref|YP_002249718.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742267|gb|ACI21324.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 876
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 191/399 (47%), Gaps = 64/399 (16%)
Query: 49 LRERFIDILLKGIKRCLNSRDKYQKELDKHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQ 108
L ++ ID++ + + D ELD+ + LR+ +E + L KE T+ + +++
Sbjct: 388 LPDKAIDLIDEAAAKLRMEIDSMPIELDEIERKLRQLEIERQALSKEPTEDAKEK--IKK 445
Query: 109 IDNELKDAFF---ELVS--------FVKLR-MQVEYDDFVSCVHDAKRVKDYS------- 149
I E++ EL + +K+R ++ E + A+R D +
Sbjct: 446 ISQEIEQLLTKKEELNTQWQAEKEFILKIREIKAEIEQAKIASEQAERQGDLTRAAELRY 505
Query: 150 -------KILDQIDARV----HGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYM 198
K LD+ +AR+ G+ K VD E+IAEV +K TGIP ++ +
Sbjct: 506 GKLIELQKALDEANARLKEIQRGRQMLKEEVDEEDIAEVVAKWTGIPVKRLLESETQKLI 565
Query: 199 RVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKA 257
+++ RLK+RV GQ++AI + A+ + +A GL R +G F+F GP GK ELAKA
Sbjct: 566 KMEERLKERVVGQDEAIIAVSNAIRRARA---GLQDPNRPIGSFMFLGPTGVGKTELAKA 622
Query: 258 IANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVV 305
+A L+ D++N +I DM Y E ++ + L V++RPYSVV
Sbjct: 623 LAEFLF---DDENAMIRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVV 679
Query: 306 LFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTA 365
LFD+IEKA+ + N+LL+IL D R D NT+IIMTS++ + E +
Sbjct: 680 LFDEIEKAHQEVFNILLQIL--DDGRLTDGHGRTVDFRNTIIIMTSNIGSAHIQEFLENK 737
Query: 366 TY-----------GRVNEVTGSLFKPSLLKLLDKLVVID 393
R+ + + F+P L +D++++ +
Sbjct: 738 GSEHWQDLKKDLKTRIIDDLRAFFRPEFLNRIDEIIIFN 776
>gi|378697060|ref|YP_005179018.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
gi|301169578|emb|CBW29179.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
Length = 856
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 137/271 (50%), Gaps = 37/271 (13%)
Query: 144 RVKDYSKILDQIDARVHGKFKEKLAVDV--EEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
R+ D K L+Q + GK L V EEIAEV SK TGIP S +E+ +R++
Sbjct: 505 RIPDLEKQLEQAETS-EGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L KRV GQN+A+D + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 564 EELHKRVIGQNEAVDAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLAK 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D+ D ++ DM + E S+ + L V++RPYSV+L D
Sbjct: 621 FLFDSED---AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDL--------KDEQVYE 360
++EKA++ + N+LL++L D R D NT++IMTS+L KDE E
Sbjct: 678 EVEKAHADVFNILLQVL--DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSE 735
Query: 361 VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ V V F+P + +D+ VV
Sbjct: 736 M-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|218197115|gb|EEC79542.1| hypothetical protein OsI_20656 [Oryza sativa Indica Group]
Length = 913
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 208/420 (49%), Gaps = 64/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSR---DKYQKELDKH 78
H ++IQD AL +A++++ R L ++ ID++ + C N R D +E+D
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVDEA---CANVRVQLDSQPEEIDNL 418
Query: 79 KYFLRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
+ + VE+ L KE D +R +++ ++L+D L +K R + E D +
Sbjct: 419 ERKRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLT--MKYRKEKERIDEIR 476
Query: 138 -----------CVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVE 172
+ +A+R D +++ D +ID A++ + E L V E
Sbjct: 477 KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLESETGENLMLTETVGPE 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV S+ TGIP + +ER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 537 QIAEVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRA---GL 593
Query: 233 SSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+
Sbjct: 594 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+LFD++EKA+ ++ N LL++L D R
Sbjct: 651 APPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 709 VDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEIVIFD 767
>gi|376288581|ref|YP_005161147.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae BH8]
gi|371585915|gb|AEX49580.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae BH8]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|376285602|ref|YP_005158812.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae 31A]
gi|371579117|gb|AEX42785.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae 31A]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|322514940|ref|ZP_08067954.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
gi|322119090|gb|EFX91247.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
Length = 864
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 127/240 (52%), Gaps = 32/240 (13%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + ++ + +A G
Sbjct: 541 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEDVLHSRVIGQNEAVEAVANSIRRSRA---G 597
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 598 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLV 654
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 655 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 712
Query: 339 AFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + Y+V+ T V EV G F+P + +D+ V+
Sbjct: 713 TVDFRNTVVIMTSNLGSHLIQENAYKGYDVVKTM----VMEVVGQHFRPEFINRIDETVM 768
>gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630044|ref|YP_002726835.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia sp.
wRi]
gi|58535249|gb|EAL59328.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225592025|gb|ACN95044.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia sp.
wRi]
Length = 866
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 19/235 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IA + SK TGIP +E+ + ++ + +RV GQ DAI+ I A+ + ++
Sbjct: 543 VTGDDIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSG 602
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ + R G FLF GP GK ELAKA+A L+D+ + L+ FDM Y E S+
Sbjct: 603 VQ--DTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQ---SALLRFDMSEYMEKHSVSK 657
Query: 289 FFDSLAALV------------KKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ V ++RPY V+LFD+IEKAN I NLLL+IL D R
Sbjct: 658 LIGAPPGYVGYEQGGRLTEAARRRPYQVILFDEIEKANPDIFNLLLQIL--DEGRLTDSH 715
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + + + V ++ S F+P L LD++++
Sbjct: 716 GKLIDFRNTILILTSNLGAEIMLKGNVDSVRNEVMQIVKSTFRPEFLNRLDEIII 770
>gi|375291712|ref|YP_005126252.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae 241]
gi|376246548|ref|YP_005136787.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC01]
gi|371581383|gb|AEX45050.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae 241]
gi|372109178|gb|AEX75239.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC01]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|342216055|ref|ZP_08708702.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
375 str. F0436]
gi|341586945|gb|EGS30345.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
375 str. F0436]
Length = 856
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA+V SK TGIP + ++ +++ LKKRVFGQ++AID + +A+ + +A K
Sbjct: 530 EEIAQVVSKWTGIPVAKLAQTERDKLLQMDSLLKKRVFGQDEAIDAVSDAVLRARAGLK- 588
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G F+F GP GK E AKA+ L+D+ N +I DM Y E S+
Sbjct: 589 -AQNRPIGSFIFLGPTGVGKTETAKALTELLFDDERN---MIRIDMSEYMEKHSVSRLVG 644
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
S L V++ PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 SPPGYVGYDEGGQLTEAVRRAPYSVILFDEIEKAHPDVFNILLQVL--DDGRLTDNQGRT 702
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLLDKLVV 391
D NT+IIMTS++ + E + +G + V G L FKP L +D +V+
Sbjct: 703 VDFKNTVIIMTSNIGSLDLIESI--EDHGEITPEAQERVQGQLRAAFKPEFLNRIDDIVL 760
>gi|376291268|ref|YP_005163515.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372104664|gb|AEX68261.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae C7 (beta)]
Length = 849
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|429728262|ref|ZP_19262994.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus anaerobius
VPI 4330]
gi|429150253|gb|EKX93192.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus anaerobius
VPI 4330]
Length = 864
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 24/242 (9%)
Query: 166 KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
K V EEIA++ SK TGIP +E+ +R++ +L +RV GQ++ + + +A+ +
Sbjct: 537 KQEVTEEEIADIISKWTGIPIKKLVESEKEKLLRLEDKLHERVIGQDEPVRAVSDAILRS 596
Query: 226 KAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELE 284
+A GLS + R LG F+F GP GK ELAK +A EL+D+ D+ +I DM Y E
Sbjct: 597 RA---GLSDQNRPLGSFIFLGPTGVGKTELAKTLARELFDSEDS---IIRLDMSEYMEKH 650
Query: 285 SIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRK 332
S+ L V+++PYSV+LFD+IEKA+ + N+ L+IL D R
Sbjct: 651 SVSRLVGPPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNMFLQIL--DEGRL 708
Query: 333 ATRGIAAFDLTNTLIIMTSDLKDEQVYEV---MLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NTLIIMTS++ + + E + + Y V ++ FKP L +D +
Sbjct: 709 TDNKGKTVDFKNTLIIMTSNIGSDILLESKGNIDESVYKSVMDIMKFKFKPEFLNRVDDI 768
Query: 390 VV 391
++
Sbjct: 769 IM 770
>gi|67465519|ref|XP_648944.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|56465258|gb|EAL43558.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R + ++ + KRV GQ++A+ + +A+ +
Sbjct: 531 LQVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R +G F+F GP+ GK ELAKA+A EL+D+ +N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPIGSFMFLGPSGIGKTELAKALAAELFDSEEN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L +++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTVVIMTSNLGSEIIMKGV--ETTGQVDEQVKEQVMEIVKKSFKPEFLNR 760
Query: 386 LDKLVV 391
+D ++V
Sbjct: 761 MDDIIV 766
>gi|393201967|ref|YP_006463809.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327441298|dbj|BAK17663.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 709
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 198/418 (47%), Gaps = 57/418 (13%)
Query: 18 LEKIHR-LQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
E+ HR ++I D A+ A+++A R L ++ ID++ + D +ELD
Sbjct: 209 FEEHHRGVRIHDRAIIAAAQLAN--RYITDRFLPDKAIDLVDEACAMIRIEIDSMPQELD 266
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWL--RQIDN------------ELKDAFFELVS 122
+ L + +E + L KE D S + + +ID EL+ ++V
Sbjct: 267 QLTRRLTQLKIEQQALKKEKDDASKKRLEIITDEIDTLETSIKSMKEQWELEKNGLQIVR 326
Query: 123 FVK---LRMQVEYDDFVSCVHDAKRVKD--YSKI---------LDQIDARVHGKFKEKLA 168
K +M+ E DD ++ R + YSKI L+Q + G +
Sbjct: 327 DKKDELKKMEAERDDLFISGNNLARASELQYSKIPQLEKEISELEQQLKQSEGNRMLREE 386
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIA++ S+ TGIP + E+ +R++ L +RV GQ+DA+ + EA+ + ++
Sbjct: 387 VTEEEIAKIISRWTGIPVTKLVEGEREKLLRLKDTLHERVVGQDDAVTYVTEAVWRARSG 446
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K + +G FLF GP GK ELAKA+A +L+D+ D H I DM Y E S+
Sbjct: 447 IK--DPNKPIGSFLFLGPTGVGKTELAKALAAQLFDSED---HFIRIDMSEYMEKHSVSR 501
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++ PYSVVL D+IEKA+ + N+LL++L D R
Sbjct: 502 LVGAPPGYIGYEEGGQLTEAVRRNPYSVVLLDEIEKAHPDVANILLQVL--DDGRITDSQ 559
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
+ TNT+II+TS++ + +L + V +L FKP LL +D +++
Sbjct: 560 GRIVNFTNTVIILTSNIGS----QFLLEGSEESEQLVQTALRQHFKPELLNRMDDIIM 613
>gi|406664855|ref|ZP_11072630.1| Chaperone protein ClpB [Bacillus isronensis B3W22]
gi|405387703|gb|EKB47127.1| Chaperone protein ClpB [Bacillus isronensis B3W22]
Length = 709
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 198/418 (47%), Gaps = 57/418 (13%)
Query: 18 LEKIHR-LQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
E+ HR ++I D A+ A+++A R L ++ ID++ + D +ELD
Sbjct: 209 FEEHHRGVRIHDRAIIAAAQLAN--RYITDRFLPDKAIDLVDEACAMIRIEIDSMPQELD 266
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWL--RQIDN------------ELKDAFFELVS 122
+ L + +E + L KE D S + + +ID EL+ ++V
Sbjct: 267 QLTRRLTQLKIEQQALKKEKDDASKKRLEIITDEIDTLETSIKSMKEQWELEKNGLQIVR 326
Query: 123 FVK---LRMQVEYDDFVSCVHDAKRVKD--YSKI---------LDQIDARVHGKFKEKLA 168
K +M+ E DD ++ R + YSKI L+Q + G +
Sbjct: 327 DKKDELKKMEAERDDLFISGNNLARASELQYSKIPQLEKEISELEQQLKQSEGNRMLREE 386
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIA++ S+ TGIP + E+ +R++ L +RV GQ+DA+ + EA+ + ++
Sbjct: 387 VTEEEIAKIISRWTGIPVTKLVEGEREKLLRLKDTLHERVVGQDDAVTYVTEAVWRARSG 446
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K + +G FLF GP GK ELAKA+A +L+D+ D H I DM Y E S+
Sbjct: 447 IK--DPNKPIGSFLFLGPTGVGKTELAKALAAQLFDSED---HFIRIDMSEYMEKHSVSR 501
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++ PYSVVL D+IEKA+ + N+LL++L D R
Sbjct: 502 LVGAPPGYIGYEEGGQLTEAVRRNPYSVVLLDEIEKAHPDVANILLQVL--DDGRITDSQ 559
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
+ TNT+II+TS++ + +L + V +L FKP LL +D +++
Sbjct: 560 GRIVNFTNTVIILTSNIGS----QFLLEGSEESEQLVQTALRQHFKPELLNRMDDIIM 613
>gi|183230397|ref|XP_001913434.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|169802915|gb|EDS89785.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 31/246 (12%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R + ++ + KRV GQ++A+ + +A+ +
Sbjct: 531 LQVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R +G F+F GP+ GK ELAKA+A EL+D+ +N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPIGSFMFLGPSGIGKTELAKALAAELFDSEEN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L +++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN--------EVTGSLFKPSLLKL 385
D NT++IMTS+L E + + + T G+V+ E+ FKP L
Sbjct: 703 DGRGRTVDFKNTVVIMTSNLGSEIIMKGV--ETTGQVDEQVKEQVMEIVKKSFKPEFLNR 760
Query: 386 LDKLVV 391
+D ++V
Sbjct: 761 MDDIIV 766
>gi|168181276|ref|ZP_02615940.1| protein ClpB [Clostridium botulinum Bf]
gi|182675393|gb|EDT87354.1| protein ClpB [Clostridium botulinum Bf]
Length = 866
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +ELK+ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPITRLVETERQKLLQLGDQLEARVIGQGEAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIM 770
>gi|29833783|ref|NP_828417.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|54035822|sp|Q826F2.1|CLPB2_STRAW RecName: Full=Chaperone protein ClpB 2
gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 879
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 199/423 (47%), Gaps = 61/423 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVKIQDTALVSAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE +D +S++ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEEAALSKE-SDPASKT-RLEELRRELADLRGEADAKHAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK-----------------RVKDYSKILDQIDARVHGKFKE----KL 167
Q + H+A+ R++D + L + ++ K E +
Sbjct: 478 QELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQGENRLLRE 537
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V EEIAE+ + TGIP + E+ +R+ L++RV GQ++A+ ++ +A+ + ++
Sbjct: 538 VVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRARS 597
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ RR +G F+F GP GK ELAK +A L+D+ +N ++ DM Y E ++
Sbjct: 598 GIR--DPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEEN---MVRLDMSEYQERHTVS 652
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD+IEKA++ + N LL+IL D R
Sbjct: 653 RLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQIL--DDGRITDA 710
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+IIMTS++ E + E+ A + E+ G F+P L +D
Sbjct: 711 QGRTVDFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGH-FRPEFLNRVDD 769
Query: 389 LVV 391
+V+
Sbjct: 770 IVL 772
>gi|134277175|ref|ZP_01763890.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
gi|134250825|gb|EBA50904.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
Length = 865
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQN+AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QLIQSMSGSPQEEIKDAVWVEVKQHFRPEFLNRIDDVVV 767
>gi|116070848|ref|ZP_01468117.1| ATPase [Synechococcus sp. BL107]
gi|116066253|gb|EAU72010.1| ATPase [Synechococcus sp. BL107]
Length = 862
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 26/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IAEV +K TGIP + E+ ++++ L +RV GQ+ A+ + +A+ + +A
Sbjct: 536 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLETDLHRRVIGQDQAVTAVADAIQRSRA- 594
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R + FLF GP GK EL+KA+AN L+D+ D ++ DM Y E ++
Sbjct: 595 --GLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDS---DEAMVRIDMSEYMEKHTVS 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+V+LFD++EKA+ + N++L+IL D R
Sbjct: 650 RLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL--DDGRVTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D TNT++I+TS++ + + E+ A RVNE + F+P L LD +
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSILELAGDPDQHQAMESRVNEALRAHFRPEFLNRLDDQI 767
Query: 391 V 391
+
Sbjct: 768 I 768
>gi|422666963|ref|ZP_16726829.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330977495|gb|EGH77441.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 854
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 199/416 (47%), Gaps = 58/416 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H++ I D A+ A++++ PR +L ++ ID++ + R D + LD+ +
Sbjct: 361 HKVAITDGAIIAAAKLS--PRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + VE + L KE + + + L ++ E++ E ++ ++Q
Sbjct: 419 LIQLKVEAQALKKEKDEAAIKR--LEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQ 476
Query: 130 VEYDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVE 172
+ + + A+R + D + L +D HGK + +L V E
Sbjct: 477 QKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQ--HGKPENQLLRSKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S E+ +R++ L RV GQ +A+ + A+ + +A GL
Sbjct: 535 EIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G F+F GP GK EL KA+A L+ D + ++ DM + E S+
Sbjct: 592 SDPNRPSGSFMFLGPTGVGKTELCKALAEFLF---DTEEAMVRIDMSEFMEKHSVARLIG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYS++L D++EKA+S + N+LL++L+ D + G
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFNILLQVLE-DGRLTDSHG-RT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+I+MTS+L Q+ E++ A V + G+ F+P + +D++V+ +
Sbjct: 707 VDFRNTVIVMTSNLGSAQIQELVGDREAQRAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|297182165|gb|ADI18337.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Rhodobacterales bacterium HF4000_03E16]
Length = 891
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 65/420 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + R + D +ELD
Sbjct: 380 HGVRISDSALVAAATLSH--RYITDRFLPDKAIDLMDEAASRLRMAVDSKPEELDALDRD 437
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC--- 138
+ + +E E L +ED D +SR L +++ EL D + + + + Q E D S
Sbjct: 438 ILQKQIEVEALRRED-DQASRD-RLEKLEKELGD-LQDRSAQLTAKWQAERDKLASARDL 494
Query: 139 ----------VHDAKRVKDYSK-------ILDQIDARV-HGKFKEKLAVDVEE------I 174
+ AKR D +K ++ Q++ ++ + +E+ V VEE I
Sbjct: 495 KEQLDRARAELDIAKRNGDLAKAGELSYGVIPQLEKQLSEAEEQEQDGVMVEEAVRPDQI 554
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
A V + TGIPA E+ +R++ L +RV GQN A+ + A+ + A+ GL+
Sbjct: 555 ASVVERWTGIPAGKMLEGEREKLLRMEEDLHRRVVGQNQAVKAVSNAVRR---ARAGLND 611
Query: 235 R-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R LG FLF GP GK EL KA+A+ L+ D+DN ++ DM + E ++ +
Sbjct: 612 ENRPLGSFLFLGPTGVGKTELTKAVADFLF---DDDNAMVRIDMSEFMEKHAVARLIGAP 668
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK----TDFNRKATRGI 337
L V++RPY VVLFD++EKA+ + N+LL++L TD +
Sbjct: 669 PGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGR----- 723
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVVID 393
D TLI++TS+L + + ++ A + V + + F+P L LD+ ++ D
Sbjct: 724 -TVDFKQTLIVLTSNLGSQALSQLPEGADSAQARRDVMDAVRAHFRPEFLNRLDETIIFD 782
>gi|326791137|ref|YP_004308958.1| ATP-dependent chaperone ClpB [Clostridium lentocellum DSM 5427]
gi|326541901|gb|ADZ83760.1| ATP-dependent chaperone ClpB [Clostridium lentocellum DSM 5427]
Length = 867
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 203/419 (48%), Gaps = 62/419 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QIQD AL A+ ++ R + L ++ ID++ + D ELD+
Sbjct: 365 HGVQIQDNALIAAATLSD--RYISDRFLPDKAIDLVDEACAMLRTEIDSMPTELDE---- 418
Query: 82 LRRAVVEYE----QLVKEDTDHSSRSFWLRQID-NELKDAFFELVS--------FVKLR- 127
+ R V++ E L KED S ++ Q + EL+D F + + K+R
Sbjct: 419 IARKVLQLEIAETALKKEDDPISKQNLADTQKELAELRDKFKAMRTQWENEKDVITKVRG 478
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVD 170
++ E + + + A+R DY+K L++ +A + + L V+
Sbjct: 479 IKEEIETATANMQKAEREYDYNKAAELKYGIIPGLKKQLEEAEAMAYKGSEGSLLRDKVN 538
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIA++ ++ T IP + + +R++ L KRV GQN+A+D + +A+ + +A K
Sbjct: 539 EEEIAKIIARWTQIPITKLMEGERHKLLRLEEILHKRVIGQNEAVDKVTDAILRSRAGIK 598
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
RR +G FLF GP GK ELAKA+A L+ D+++ +I DM Y E ++
Sbjct: 599 --DPRRPIGSFLFLGPTGVGKTELAKALAEALF---DDEHSMIRIDMSEYMEKHAVARLI 653
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PY+V+LFD++EKA+ + N+LL++L D R
Sbjct: 654 GAPPGYVGYEEGGQLTEAVRRKPYAVILFDEVEKAHPDVFNVLLQVL--DDGRITDSKGR 711
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+II+TS+L + + E + + VN + + F+P L LD++V+
Sbjct: 712 TVDFKNTIIILTSNLGSQAILEGINSQGEISEEAEETVNHLLKTHFRPEFLNRLDEIVL 770
>gi|167031687|ref|YP_001666918.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
gi|166858175|gb|ABY96582.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
Length = 854
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ +A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 ALLHQRVIGQGEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 736 RAAVMDAVGAHFRPEFINRIDEVVVFE 762
>gi|254252226|ref|ZP_04945544.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
gi|124894835|gb|EAY68715.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
Length = 865
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AID + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAIDAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQSMSGSPQDEIKDAVWIEVKQHFRPEFLNRIDDVVV 767
>gi|440291284|gb|ELP84553.1| heat shock protein, putative [Entamoeba invadens IP1]
Length = 573
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 131/248 (52%), Gaps = 35/248 (14%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V + I +V SK TGIP S + R +++ L KRV GQ++A+ + EA+ +
Sbjct: 240 LQVTPQLIEDVVSKWTGIPVSRMTQSEKTRLLKLGDELHKRVVGQDEAVTAVSEAILR-- 297
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL S +R G F+F GP+ GK ELAKA+A +L+D+ +N+++ DM Y E S
Sbjct: 298 -SRSGLGSDKRPTGSFMFLGPSGVGKTELAKALAEQLFDD---ENNIVRIDMSEYMESHS 353
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L V++RPYSVVLFD++EKA+ + N+LL++L D
Sbjct: 354 VSRLIGAPPGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHQQVFNVLLQVLD-DGRLTD 412
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTG----------SLFKPSLL 383
RG D NT+IIMTS+L +++L T N +G FKP +
Sbjct: 413 GRG-RTVDFKNTVIIMTSNLGS----DILLNGTTKDGNLKSGVKEAVLDNVKKFFKPEFI 467
Query: 384 KLLDKLVV 391
LD +VV
Sbjct: 468 NRLDDIVV 475
>gi|403527068|ref|YP_006661955.1| chaperone protein ClpB 2 [Arthrobacter sp. Rue61a]
gi|403229495|gb|AFR28917.1| chaperone protein ClpB 2 [Arthrobacter sp. Rue61a]
Length = 878
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 196/424 (46%), Gaps = 63/424 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVRIQDSALVAAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD-----------------AFFEL 120
+ R +E L KE TD +S++ L ++ EL D A +L
Sbjct: 420 LTRKVTRLEIEEAALAKE-TDPASKT-RLTELRRELADLRAEADAKRAQWEAERQAIHKL 477
Query: 121 ----VSFVKLRMQVE-----YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKL---- 167
+ R++ E YD ++ R+ D + L + R+ K EK
Sbjct: 478 QEIRTELERARLEAEEAERNYDLNLAAELRYGRLADLERRLAAEEERLTAKQGEKRLLRE 537
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V +EIA++ + TGIP + E+ + + L+ RV GQ +AI + +A+ + ++
Sbjct: 538 VVTEDEIADIVAAWTGIPVARLKQGEREKVLHLDEILRARVVGQEEAITAVSDAIIRARS 597
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ RR +G F+F GP GK ELAKA+A L+D+ +N +I DM Y E ++
Sbjct: 598 GIR--DPRRPIGSFIFLGPTGVGKTELAKALAASLFDS---ENAMIRLDMSEYQERHTVS 652
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD++EKA+ I N LL++L D R
Sbjct: 653 RLLGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDIFNTLLQVL--DDGRITDS 710
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLLD 387
D NT+IIMTS++ + + E +A G + E V G L F+P L +D
Sbjct: 711 QGRTVDFRNTVIIMTSNIGSQYLLEG--SAEGGTITEEARGMVLGELRAHFRPEFLNRVD 768
Query: 388 KLVV 391
V+
Sbjct: 769 DTVL 772
>gi|374263900|ref|ZP_09622446.1| chaperone protein ClpB [Legionella drancourtii LLAP12]
gi|363535743|gb|EHL29191.1| chaperone protein ClpB [Legionella drancourtii LLAP12]
Length = 415
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 31/287 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +EIAEV SK TGIP + +E+ ++++ L R+ GQN+AID + A+ + +A
Sbjct: 88 VTEDEIAEVVSKWTGIPVAKMMEGEKEKLLKMEEVLHNRLIGQNEAIDAVSNAIRRSRA- 146
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R +G FLF GP GK EL KA+A L+D + +I DM + E S+
Sbjct: 147 --GLSDPNRPIGSFLFLGPTGVGKTELCKALAAYLFDTEEA---MIRIDMSEFMEKHSVA 201
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSV+L D++EKA++ + N+LL+++ D R
Sbjct: 202 RLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVM--DDGRLTDG 259
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + E+ +Y V E+ G F+P + +D VV
Sbjct: 260 QGRTVDFRNTIIVMTSNLGSHVIQEMGTKVSYEEVKAAVMELVGQHFRPEFINRIDDTVV 319
Query: 392 I-DLAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIA 437
LA + + E+ + K+++ D + V P ALVH+A
Sbjct: 320 FHSLAKEQIAKIANIQIEYLHKRLKQQDID---LDVTP--EALVHLA 361
>gi|307246005|ref|ZP_07528087.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852940|gb|EFM85163.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 857
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 359 HHVQIIDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 417 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 474
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 475 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRAKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|17864015|gb|AAL47016.1|AF449501_1 ClpB ATP protease [Paracoccidioides brasiliensis]
Length = 792
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 201/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R +L ++ ID++ + R D + LDK +
Sbjct: 291 HGVKILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERR 348
Query: 82 LRRAVVEYEQLVKEDTDHSSR---SFWLRQIDNELKD---------AFFELVSFVKLRMQ 129
L + ++ E VK+D D SR S +QI++ KD + LV K ++Q
Sbjct: 349 LIQLKLQLEA-VKKDEDAGSRAEVSHLEKQIEDVQKDYNDLEEVWKSEKTLVEGTK-QIQ 406
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLAVD--VEE-------------- 173
+ D + A+R D + + ++ V + +++LA D VEE
Sbjct: 407 AQLDQARIALQKAQRENDLGE-MSRLQYGVIPELEKQLAQDELVEEKEEPKLLRNKVTDN 465
Query: 174 -IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IAEV S TGIP + E+ ++++ L +RV GQ++A+ + A+ + +A GL
Sbjct: 466 EIAEVVSAATGIPVAKMLQGEREKLLQMESFLHQRVVGQDEAVIAVSNAVRRSRA---GL 522
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 523 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 579
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 580 APPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 637
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L V E+ + V V + F+P + +D+LVV
Sbjct: 638 VDFKNTVIVMTSNLGSSDVRELGDNPSRDDVRNVVMAAVSEHFRPEFINRIDELVV 693
>gi|417844398|ref|ZP_12490442.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
gi|341956851|gb|EGT83267.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
Length = 856
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 125/241 (51%), Gaps = 34/241 (14%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA++ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT++IMTS+L KDE E+ V V G F+P + +D+ V
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQGSKDESYSEM-----KALVMSVVGQHFRPEFINRIDETV 760
Query: 391 V 391
V
Sbjct: 761 V 761
>gi|357416692|ref|YP_004929712.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
gi|355334270|gb|AER55671.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
Length = 861
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 200/418 (47%), Gaps = 61/418 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSH--RYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRMERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-----------NEL-KDAFFELVSFVKLRMQ 129
L + + E L KE S++ + D NE+ K L +++ Q
Sbjct: 419 LIQLKTQREMLKKEKDAESAKRLADLEADIDTLEREFSDLNEVWKSEKAALQGATRIKEQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
+E + A+R +DY++ + +I V + +++LA V EE
Sbjct: 479 IEAARV--ELEGAQRRQDYAR-MSEIQYGVLPQLEKQLAEAQAAEQQEFKLVQDRVTAEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV S+ TGIP S E+ ++++ +L++RV GQ +AI V+ +++ + +A GLS
Sbjct: 536 IAEVVSRWTGIPVSKMLEGEREKLLKMEDQLRERVVGQEEAIKVVSDSVRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D+++ +I DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSE---AMIRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHGDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEV-------MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + + E+ T V V + F+P + LD +VV
Sbjct: 708 DFRNTVIVMTSNLGSQLIQEMSHDESAESYTKIKAAVMGVVQAHFRPEFINRLDDIVV 765
>gi|327406003|ref|YP_004346841.1| ATP-dependent chaperone ClpB [Fluviicola taffensis DSM 16823]
gi|327321511|gb|AEA46003.1| ATP-dependent chaperone ClpB [Fluviicola taffensis DSM 16823]
Length = 870
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 137/258 (53%), Gaps = 33/258 (12%)
Query: 158 RVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDV 217
+V+ KF K VD EEIA+V SK TGIP S + +R++ L KRV GQ +AI+
Sbjct: 519 QVNSKFI-KEEVDAEEIADVVSKWTGIPISKMLESEVSKLLRLEDELGKRVVGQEEAIEA 577
Query: 218 IFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDM 277
I +A+ + +A + + R+ +G F+F GP GK ELAKA+A L+ +++N + DM
Sbjct: 578 ISDAVRRSRAGLQDM--RKPIGSFIFLGPTGVGKTELAKALAEFLF---NDENAMTRIDM 632
Query: 278 GNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKIL 325
Y E S+ + L V++RPYS+VL D+IEKA+ + N+LL++L
Sbjct: 633 SEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSIVLLDEIEKAHPDVFNILLQVL 692
Query: 326 KTDFNRKATRGIAAFDLTNTLIIMTSDL------------KDEQVYEVMLTATYGRVNEV 373
D R + NT+IIMTS+L K+E ++E M A + +V E+
Sbjct: 693 --DDGRLTDNKGRTVNFKNTIIIMTSNLGSHLIQESFEGVKEENLHEAMNKAKF-KVLEL 749
Query: 374 TGSLFKPSLLKLLDKLVV 391
+P L +D+ ++
Sbjct: 750 LKQTIRPEFLNRIDETII 767
>gi|441510815|ref|ZP_20992716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
gi|441445051|dbj|GAC50677.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
Length = 854
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V V +IAEV S+ TGIP S T+ E+ + ++ L RV GQ+ A+ + EA+ + A
Sbjct: 489 VTVMDIAEVVSRQTGIPVSELTTEEREKLLGLENTLHDRVIGQDKAVTAVAEAVRR---A 545
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G FLF GP GK ELAKA+A ++ + D +I FDM + E ++
Sbjct: 546 RAGLSDPNRPIGSFLFLGPTGVGKTELAKALAAAVFGDED---RMIRFDMSEFQEKHNVA 602
Query: 288 HF---------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+D L V+++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 603 RLVGAPPGYVGYDDAGQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLL--DDGRVTDG 660
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL-------FKPSLLKLLDK 388
D NTL+IMTS++ +++L A G V +V + F+P L +D+
Sbjct: 661 QGRTVDFKNTLVIMTSNIG----SDLILNAPDGDVEKVVPDVMDLLRQRFRPEFLNRIDE 716
Query: 389 LVVID 393
VV D
Sbjct: 717 TVVFD 721
>gi|419861611|ref|ZP_14384238.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
gi|387981890|gb|EIK55423.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
Length = 849
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMESELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|222053891|ref|YP_002536253.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
gi|221563180|gb|ACM19152.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
Length = 866
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 133/240 (55%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD + +AE+ +K TGIP + E+ +R++ RLK RV GQ++A++++ A+ + +
Sbjct: 536 VDGDMVAEIVAKWTGIPVNRMLETESEKLVRMEERLKGRVVGQDEALELVANAVRR---S 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G F+F GP GK E A+A+A L+ D+D ++ DM Y E ++
Sbjct: 593 RSGLSDPNRPIGSFIFLGPTGVGKTETARALAEFLF---DDDQAIVRIDMSEYQERHTVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L +++RPYS+VLFD+IEKA+S + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGQLTEAIRRRPYSIVLFDEIEKAHSDVFNILLQVL--DDGRLTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+IIMTS+L Q + + Y ++ V G+L FKP L +D++++
Sbjct: 708 QGRTVDFRNTVIIMTSNL-GSQFIQQYASGDYAKMRTMVMGTLRENFKPEFLNRIDEIII 766
>gi|340362813|ref|ZP_08685179.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
gi|339886971|gb|EGQ76574.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
Length = 857
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVSKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEAVMEEVKAYFRPEMINRIDEVVV 763
>gi|397164282|ref|ZP_10487739.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
DSM 16656]
gi|396094128|gb|EJI91681.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
DSM 16656]
Length = 857
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 196/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+ + +E L+KE + S + L ++ EL+D + + + ++
Sbjct: 419 IIQLKLEQRALMKESDEASKKR--LEMLNEELEDKERQYSALEEEWKAEKASLSGTQTIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFK-----EKLAVDVEE 173
E + + A+R D Y KI + Q++A + K D+E
Sbjct: 477 AELEQAKIAMEQARRNGDLGRMSELQYGKIPELEKQLEAATQAEGKTMRLLRNRVTDIE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV ++ TGIP S E+ +R++ L RV GQ++A++ + A+ + +A GLS
Sbjct: 536 IAEVLARWTGIPVSRMMEGEREKLLRMEHDLHHRVIGQDEAVEAVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL K++AN ++ D+D+ ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFLFLGPTGVGKTELCKSLANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + E V F+P + +D++VV
Sbjct: 708 DFRNTVVIMTSNLGSDLIQERFGDLDYGHMKELVMGVVSQSFRPEFINRIDEVVV 762
>gi|261377553|ref|ZP_05982126.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
gi|269146293|gb|EEZ72711.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
Length = 857
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKETDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQIDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E+ F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEIVMEDVKEHFRPEMINRIDEVVV 763
>gi|119963675|ref|YP_947629.1| ATP-dependent chaperone protein ClpB [Arthrobacter aurescens TC1]
gi|119950534|gb|ABM09445.1| ATP-dependent chaperone protein ClpB [Arthrobacter aurescens TC1]
Length = 878
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 196/424 (46%), Gaps = 63/424 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVRIQDSALVAAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD-----------------AFFEL 120
+ R +E L KE TD +S++ L ++ EL D A +L
Sbjct: 420 LTRKVTRLEIEDAALAKE-TDPASKT-RLTELRRELADLRAEADAKRAQWEAERQAIHKL 477
Query: 121 ----VSFVKLRMQVE-----YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKL---- 167
+ R++ E YD ++ R+ D + L + R+ K EK
Sbjct: 478 QEIRTELERARLEAEEAERNYDLNLAAELRYGRLADLERRLAAEEERLTAKQGEKRLLRE 537
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V +EIA++ + TGIP + E+ + + L+ RV GQ +AI + +A+ + ++
Sbjct: 538 VVTEDEIADIVAAWTGIPVARLKQGEREKVLHLDEILRARVVGQEEAITAVSDAIIRARS 597
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ RR +G F+F GP GK ELAKA+A L+D+ +N +I DM Y E ++
Sbjct: 598 GIR--DPRRPIGSFIFLGPTGVGKTELAKALAASLFDS---ENAMIRLDMSEYQERHTVS 652
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD++EKA+ I N LL++L D R
Sbjct: 653 RLLGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDIFNTLLQVL--DDGRITDS 710
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLLD 387
D NT+IIMTS++ + + E +A G + E V G L F+P L +D
Sbjct: 711 QGRTVDFRNTVIIMTSNIGSQYLLEG--SAEGGTITEEARGMVMGELRAHFRPEFLNRVD 768
Query: 388 KLVV 391
V+
Sbjct: 769 DTVL 772
>gi|376294103|ref|YP_005165777.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC02]
gi|372111426|gb|AEX77486.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae HC02]
Length = 849
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ DM Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDMSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGRGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|330446996|ref|ZP_08310647.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491187|dbj|GAA05144.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 858
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 196/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVEITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFV----------KLRMQVE 131
+ + +E + L KED D S + + +LK+ + + V ++ E
Sbjct: 419 IIQLKIEQQALEKEDDDASHKRLSDLLEELDLKEREYAELEEVWNAEKAALSGTQHIKAE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEIAE 176
+ + V A+R D Y +I + Q+D + +E K V EIA+
Sbjct: 479 LEQARTDVEIARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLKNKVTDTEIAD 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V SK TGIP S ++ +R++ L RV GQ++A++ + A+ + +A GL+ +
Sbjct: 539 VLSKATGIPVSKMLEGERDKLLRMEDELHHRVIGQDEAVEAVANAIRRSRA---GLADPQ 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL K++AN ++D+ + ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKSLANFMFDSEEA---MVRIDMSEFMEKHSVARLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSVVL D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L +++ E Y V EV G F+P + +D+ VV
Sbjct: 711 NTVIIMTSNLGSDRIQEHFGNLDYDGIKALVMEVVGQHFRPEFINRVDETVV 762
>gi|152990623|ref|YP_001356345.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Nitratiruptor
sp. SB155-2]
gi|151422484|dbj|BAF69988.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Nitratiruptor
sp. SB155-2]
Length = 862
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 199/426 (46%), Gaps = 68/426 (15%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H +QI D AL A +++ R L ++ ID++ + + EL K
Sbjct: 357 LEAHHNVQILDSALVAAVKLSS--RYITDRYLPDKAIDLIDEAAAELKMQIESEPFELSK 414
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELV 121
K +++ +VE E L+ E + + L++I+ EL D F+ +
Sbjct: 415 VKREIQQLLVEKEALLMEKSKKNEER--LKEIEKELADLEEKKRALESQFETEKKIFKEI 472
Query: 122 SFVKLRMQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH------GKFKE--- 165
+ +K +++ + AKR DY+K + Q++ ++ + +E
Sbjct: 473 AEIKEKIE----RLKAEAEKAKREGDYNKAAEIEYGQIPQMEQKLAELNEQWNRMQEAGT 528
Query: 166 --KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
K AVD E IA++ SK TGIP + +E+ + V+ LKK V GQ+ AI + A+
Sbjct: 529 LLKNAVDEEMIAKIVSKWTGIPVTKMLQSEKEKILHVEDELKKYVVGQDAAIKAVARAIK 588
Query: 224 KPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ KA GLS + R +G F+F GP GK E AK +A L+ D + LI DM Y E
Sbjct: 589 RNKA---GLSDTNRPIGSFMFLGPTGVGKTETAKTLARFLF---DTEKSLIRIDMSEYME 642
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
++ + L V+++PYSVVLFD+IEKA+ + N+LL++L D
Sbjct: 643 KHAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVL--DDG 700
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLD 387
R D NT+IIMTS++ +++ E R V L FKP L LD
Sbjct: 701 RLTDNKGVTVDFRNTIIIMTSNIASDKIME--FKDPEDREKAVKDELKRYFKPEFLNRLD 758
Query: 388 KLVVID 393
+V+ +
Sbjct: 759 DIVIFN 764
>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 865
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 136/255 (53%), Gaps = 27/255 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV ++ TGIP S +E+ ++++ RL+ RV GQ++A+ + A+ + +A
Sbjct: 535 VGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVANAIRRSRA- 593
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS RR G FLF GP GK EL KA+A L+D+ D L+ DM + E S+
Sbjct: 594 --GLSDPRRPNGSFLFLGPTGVGKTELTKALAEFLFDSED---LLVRIDMSEFMEKHSVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA++ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHADVFNVLLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L +++ E + Y V +V F+P L +D++V+
Sbjct: 707 QGRTVDFRNTVIVMTSNLGSDRIQEFSRSGNYDAMRVAVMDVVQDHFRPEFLNRIDEMVI 766
Query: 392 ID--LAVPLLDTTRL 404
AV L + T L
Sbjct: 767 FHPLTAVQLREITSL 781
>gi|320102257|ref|YP_004177848.1| ATP-dependent chaperone ClpB [Isosphaera pallida ATCC 43644]
gi|319749539|gb|ADV61299.1| ATP-dependent chaperone ClpB [Isosphaera pallida ATCC 43644]
Length = 883
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 128/248 (51%), Gaps = 24/248 (9%)
Query: 161 GKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
GK K VD EEIAEV ++ TGIP + T E+ + ++ L +RV GQ+DA++ +
Sbjct: 547 GKRLLKREVDQEEIAEVVAQWTGIPVAKMLTSEREKLINLERHLHQRVVGQDDAVEAVAN 606
Query: 221 ALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNY 280
A+ + +A + R +G FLF GP GK ELAKA+A L+ D++ ++ DM Y
Sbjct: 607 AVRRSRANLQ--DPNRPIGSFLFLGPTGVGKTELAKALAEFLF---DDEQAMVRIDMSEY 661
Query: 281 TELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTD 328
E ++ + L V++RPYSVVL D+IEKA+ + N+LL++L D
Sbjct: 662 GERHNVARLIGAPPGYVGYEEGGRLTEAVRRRPYSVVLLDEIEKAHRDVFNVLLQVL--D 719
Query: 329 FNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT-----YGRVNEVTGSLFKPSLL 383
R D NT+IIMTS+L + E+ GRV EV + F P L
Sbjct: 720 DGRLTDGHGRTVDFRNTVIIMTSNLASPIIAELAERDADEKELRGRVMEVLKTAFLPEFL 779
Query: 384 KLLDKLVV 391
+D ++
Sbjct: 780 NRIDDTII 787
>gi|440291339|gb|ELP84608.1| heat shock protein, putative [Entamoeba invadens IP1]
Length = 864
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 131/248 (52%), Gaps = 35/248 (14%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V + I +V SK TGIP S + R +++ L KRV GQ++A+ + EA+ +
Sbjct: 531 LQVTPQLIEDVVSKWTGIPVSRMTQSEKTRLLKLGDELHKRVVGQDEAVTAVSEAILR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL S +R G F+F GP+ GK ELAKA+A +L+D+ +N+++ DM Y E S
Sbjct: 589 -SRSGLGSDKRPTGSFMFLGPSGVGKTELAKALAEQLFDD---ENNIVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L V++RPYSVVLFD++EKA+ + N+LL++L D
Sbjct: 645 VSRLIGAPPGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHQQVFNVLLQVLD-DGRLTD 703
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTG----------SLFKPSLL 383
RG D NT+IIMTS+L +++L T N +G FKP +
Sbjct: 704 GRG-RTVDFKNTVIIMTSNLGS----DILLNGTTKDGNLKSGVKEAVLDNVKKFFKPEFI 758
Query: 384 KLLDKLVV 391
LD +VV
Sbjct: 759 NRLDDIVV 766
>gi|399926768|ref|ZP_10784126.1| ATPase with chaperone activity ATP-binding subunit [Myroides
injenensis M09-0166]
Length = 863
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H+++I+DEA+ A +++ R L ++ ID++ + + + +ELD
Sbjct: 359 HKVRIKDEAIIAAVNLSE--RYITNRFLPDKAIDLMDEAAAKLRMEINSKPEELDVLDRK 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLR--QIDNELKDAFF------ELVSFVKLRMQVEYD 133
+ + +E E + +ED + +S L + E D F E+V V+ ++ E +
Sbjct: 417 IMQLEIEIEAIKREDDEDKLKSLGLELGNLKEERNDIFTKWQSEKEVVDRVQ-NIKQEIE 475
Query: 134 DFVSCVHDAKRVKDYSKILD------------------QIDARVHGKFKEKLAVDVEEIA 175
+ A+R DY K+ + ++D G+ K V E+IA
Sbjct: 476 SYKQEAEKAEREGDYGKVAEIRYGKIKDAHEKLEQAQKELDDNQDGQSLIKEEVTSEDIA 535
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV +K TG+P + E+ + ++ L KRV GQ++AI+ I A+ + +A GL
Sbjct: 536 EVVAKWTGVPVTKMLQSDREKLLHLEDELHKRVVGQDEAIEAISNAVRRSRA---GLQDP 592
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
++ LG FLF G GK ELAKA+A L+ D++N + DM Y E S+ +
Sbjct: 593 KKPLGSFLFLGTTGVGKTELAKALATYLF---DDENAMTRIDMSEYGERHSVSRLVGAPP 649
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSVVL D+IEKA+ N+LL++L D R D
Sbjct: 650 GYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTFNILLQVL--DEGRLTDNKGRTADF 707
Query: 343 TNTLIIMTSDL----------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS++ + VY+ A G +NE+ L +P L +D++V+
Sbjct: 708 KNTIIIMTSNMGSHIIQEKFDSTDDVYKASEEAKEGVLNELK-QLVRPEFLNRIDEVVM 765
>gi|325179668|emb|CCA14066.1| heat shock protein 101 putative [Albugo laibachii Nc14]
Length = 888
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 118/212 (55%), Gaps = 22/212 (10%)
Query: 160 HGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIF 219
H K ++ D E+I ++ S+ TGIP S + +R + ++ R+ RV GQ +A++ +
Sbjct: 525 HPKLVSEVVRD-EQICQIVSRWTGIPVSRLTSSTSDRLLHLEERIHNRVVGQEEAVNAVC 583
Query: 220 EALTKPKAAKKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMG 278
EA+ + +A GLS R Q G FLF GP GK ELAKA+A EL+ DND H++ DM
Sbjct: 584 EAVVRSRA---GLSRREQPTGSFLFLGPTGVGKTELAKALAFELF---DNDKHMVRIDMS 637
Query: 279 NYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK 326
Y E S+ + L ++++PY+VVL D+IEKA+ +LN+LL++L
Sbjct: 638 EYMEEHSVARLIGAPPGYVGHEEGGQLTESIRRKPYNVVLLDEIEKAHPKVLNILLQLL- 696
Query: 327 TDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV 358
D R D TN ++IMTS++ E +
Sbjct: 697 -DDGRLTDSHGRTVDFTNVVVIMTSNIGAEHL 727
>gi|420138348|ref|ZP_14646277.1| ClpB protein [Pseudomonas aeruginosa CIG1]
gi|421162907|ref|ZP_15621700.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
gi|403248928|gb|EJY62455.1| ClpB protein [Pseudomonas aeruginosa CIG1]
gi|404532674|gb|EKA42547.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
Length = 854
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 197/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVSITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID--------NELKDAF----FELVSFVKLRMQ 129
L + +E E L KED + + + + D +L+D + E+ +++ +
Sbjct: 419 LIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEDIWKSEKAEVQGSAQIQQK 478
Query: 130 VEY-----------DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+E D S + + D + L +D HGK + +L V EEI
Sbjct: 479 IEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQ--HGKTENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ +R++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L ++++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E+ A V + + F+P + +D++VV +
Sbjct: 709 FRNTVVVMTSNLGSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFE 762
>gi|389851209|ref|YP_006353444.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 258]
gi|388248515|gb|AFK17506.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 258]
Length = 849
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
+V S TGIPA E+ +R++ L RV GQ +A++ + +A+ + +A
Sbjct: 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|284042115|ref|YP_003392455.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
gi|283946336|gb|ADB49080.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
Length = 892
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 197/423 (46%), Gaps = 69/423 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R L ++ ID++ + D +ELD+
Sbjct: 367 HGVRIQDAALVAAATLSH--RYITDRFLPDKAIDLVDEACAVVRTEIDSLPQELDEITRR 424
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVH- 140
+ R +E L KED D +SR L+ + EL D + + M +++ +H
Sbjct: 425 VTRLEIEEAALQKED-DRASRD-RLQTLRKELADLRAQADA-----MTAQWEAERQAIHR 477
Query: 141 ----------------DAKRVKDYSKI-------LDQIDARV-----------HGKFKEK 166
DA+R D ++ L Q++ R+ HG +
Sbjct: 478 LQHLRRELEEVRREAEDAERGYDLNRAAELRHGKLPQLEQRLRAEEERLSTKQHGARLLR 537
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
V +EIAEV ++ TGIP + E+ +R+ L +RV GQ++A+ ++ +A+ + +
Sbjct: 538 EEVTDDEIAEVVARWTGIPVARLMEGEREKLLRLDQILHERVIGQDEAVQLVADAVIRAR 597
Query: 227 AAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
A K RR +G F+F GP GK EL++A+A L+D+ DN ++ DM Y E ++
Sbjct: 598 AGVK--DPRRPIGSFIFLGPTGVGKTELSRALAQALFDSEDN---MVRLDMSEYQERHTV 652
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSVVLFD+IEKA+ + N LL++L D R
Sbjct: 653 SRLVGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVL--DDGRITD 710
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT++IMTS++ + + + + G+V S F+P L +D+
Sbjct: 711 AQGRTVDFRNTVVIMTSNIGSQYLLDGISPDGAISDTARGQVMGDLRSHFRPEFLNRVDE 770
Query: 389 LVV 391
+V+
Sbjct: 771 IVL 773
>gi|253995931|ref|YP_003047995.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
gi|253982610|gb|ACT47468.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
Length = 863
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 67/421 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R L ++ ID++ + R D + +DK +
Sbjct: 361 HGVEITDPAIVAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL----RMQVEYDDFVS 137
L + +E E + +E + S + F L I++E+ E ++ + QV+ +
Sbjct: 419 LIQLKIEREAVRREKDEGSKKRFEL--IEDEISKLEKEYADLEEIWKSEKAQVQGSAHIK 476
Query: 138 C--------VHDAKRVKDYSKI-------LDQIDARVHGKFKEKLAVDV----------- 171
+ +A R D+ K+ L Q++ ++ +++VD+
Sbjct: 477 EAIEKVKFEMEEATRKGDWQKVSELQYGKLPQLETQLKQASTAEVSVDLSKHKMLRTEVG 536
Query: 172 -EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
+EIAEV S+ TGIP S T E+ + ++ +L +RV GQ++A+ ++ +A+ + ++
Sbjct: 537 ADEIAEVVSRATGIPVSKMMTGEREKLLTMEAKLHERVVGQDEAVRLVSDAIRR---SRS 593
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL R G FLF GP GK EL K++AN L+ D++ HLI DM + E S+
Sbjct: 594 GLGDPNRPYGSFLFLGPTGVGKTELCKSLANFLF---DSEEHLIRIDMSEFMEKHSVARM 650
Query: 290 F------------DSLAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 IGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGQG 708
Query: 338 AAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+IIMTS+L + + Y+++ A G V + F+P + +D++V
Sbjct: 709 RTVDFKNTVIIMTSNLGSQMIQSMSDQDYQLVKLAVMGEVK----THFRPEFVNRIDEVV 764
Query: 391 V 391
V
Sbjct: 765 V 765
>gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208559|ref|YP_001053784.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|126097351|gb|ABN74179.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
Length = 857
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 196/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 359 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 417 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIK 474
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVDVE 172
E ++ + A+R ++ K+ + ++ ++H K + V E
Sbjct: 475 TELENARIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 648
Query: 292 SLAALV------------KKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ V ++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAARRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|307729565|ref|YP_003906789.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
gi|307584100|gb|ADN57498.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
Length = 865
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI+ + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHERVIGQDEAINAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGS----LFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ V + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQSMVGEPQEAVKDAVWTEVKLHFRPEFLNRIDDVVV 767
>gi|421727045|ref|ZP_16166211.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
gi|410372260|gb|EKP26975.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
Length = 857
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVEAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASIK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQMAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQSFRPEFINRIDEVVV 762
>gi|115351836|ref|YP_773675.1| ATPase [Burkholderia ambifaria AMMD]
gi|172060806|ref|YP_001808458.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
gi|115281824|gb|ABI87341.1| ATPase AAA-2 domain protein [Burkholderia ambifaria AMMD]
gi|171993323|gb|ACB64242.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
Length = 865
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMTGAPQEEIKDAVWIEVKQHFRPEFLNRIDDVVV 767
>gi|296314090|ref|ZP_06864031.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
43768]
gi|296839347|gb|EFH23285.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
43768]
Length = 857
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP + ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|289209193|ref|YP_003461259.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
gi|288944824|gb|ADC72523.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
Length = 862
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++Q R +L ++ ID++ + R D + +D+ +
Sbjct: 361 HGIEITDPAIVAAAQLSQ--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPESMDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE-LKDAFFELVSFVK---------LRMQVE 131
L + +E E L KE D S + Q + E L+ + +L K +++ E
Sbjct: 419 LIQLKIEREALKKESDDASKKRLDTLQEEIERLEREYSDLEEVWKSEKASVSGAAQLKEE 478
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
+ + A+R D S++ + R+ ++ LA V EE+A
Sbjct: 479 LERARMELETARRAGDLSRMSELQYGRIP-DLEKSLAMAHEMESQETKLLRTKVTDEEVA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP S +++ +R++ + RV GQ++A++ + A+ + +A GLS
Sbjct: 538 EVVSRWTGIPVSKMLEGEKDKLLRMEEAIGARVVGQSEAVNAVANAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R G FLF GP GK EL KA+A+ L+D + ++ DM + E S+ +
Sbjct: 595 NRPNGSFLFLGPTGVGKTELTKALASFLFDTEEA---MVRIDMSEFMEKHSVARLIGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYIGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRLTDGHGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L +Q+ E+ Y V E+ G F+P + +D +VV
Sbjct: 710 RNTVIVMTSNLGSQQIQEMAGEENYDAMKAAVMEIVGQHFRPEFINRVDDVVV 762
>gi|170703405|ref|ZP_02894181.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
gi|170131681|gb|EDT00233.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
Length = 865
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMTGAPQEEIKDAVWIEVKQHFRPEFLNRIDDVVV 767
>gi|257421994|ref|ZP_05598984.1| chaperone clpB [Enterococcus faecalis X98]
gi|257163818|gb|EEU93778.1| chaperone clpB [Enterococcus faecalis X98]
Length = 868
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R D + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--DQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|416117125|ref|ZP_11594536.1| ClpB protein [Campylobacter concisus UNSWCD]
gi|384577324|gb|EIF06615.1| ClpB protein [Campylobacter concisus UNSWCD]
Length = 857
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 191/423 (45%), Gaps = 63/423 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H + I D AL A+R++ R A L ++ ID++ + + EL K
Sbjct: 357 LEVHHGITITDSALVAAARLSD--RYIANRFLPDKAIDLIDEAAAELKMQIESEPYELSK 414
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELV 121
K + VE E L ED D + L +I+ E+ D A F +
Sbjct: 415 IKREIVTLQVEKEALKMEDADKNKER--LGEIEKEIADLNEKKLALDTKFENEKAVFGGI 472
Query: 122 SFVKLRMQVEYDDFVSCVHDAKRVKD--------YSKILD------QIDARVHGKFKE-- 165
S + E D S AKR D Y KI D +++ + KE
Sbjct: 473 S----KATKEIDSLKSQAEIAKRNGDLQKAAEIEYGKIADAKKHKHELEEKWEHMKKEGV 528
Query: 166 --KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
K VD E +AE+ SK TGI T +E+Y+R++ L++ V GQ+DA+ + A+
Sbjct: 529 LLKNQVDEELVAEILSKWTGISVKKMLTSEKEKYLRIEEHLRESVVGQDDALHALARAVK 588
Query: 224 KPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ KA GL+ +R +G FLF GP GK + AKA+A L+ D++ LI FDM Y E
Sbjct: 589 RNKA---GLNEGQRPIGSFLFLGPTGVGKTQSAKALAKFLF---DDEKALIRFDMSEYME 642
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ + L V+ RPYSV+LFD++EKA+ + N+LL IL D
Sbjct: 643 KHSVSRLLGAPPGYVGYDEGGQLTEAVRIRPYSVILFDEVEKAHKDVFNILLGIL--DDG 700
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
R D NT+II+TS++ + E+ V + FKP L LD +
Sbjct: 701 RATDNKGVTVDFKNTIIILTSNIASNFIMELKGEDRDVAVKNELKNYFKPEFLNRLDDTI 760
Query: 391 VID 393
+ +
Sbjct: 761 IFN 763
>gi|290476239|ref|YP_003469139.1| ATP-dependent protease [Xenorhabdus bovienii SS-2004]
gi|289175572|emb|CBJ82375.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus bovienii SS-2004]
Length = 860
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S +++ + ++ L KRV GQN+A++ + A+ + +A GL
Sbjct: 538 EIAEILARWTGIPVSRMLESEKDKLLSMEHELHKRVIGQNEAVEAVSNAIRRSRA---GL 594
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G F+F GP GK EL KA+AN L+D++D ++ DM + E ++
Sbjct: 595 SDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDA---MVRLDMSEFMEKHTVSRLVG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 652 APPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRT 709
Query: 340 FDLTNTLIIMTSDLKDEQVYE----VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E + T V EV G F+P + +D++VV
Sbjct: 710 VDFRNTVIIMTSNLGSDIIQERFGALDYTGMKDMVMEVVGHHFRPEFINRVDEVVV 765
>gi|291614661|ref|YP_003524818.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
gi|291584773|gb|ADE12431.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
Length = 861
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 130/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ ++++ +L +RV GQ++A+ ++ +A+ + +
Sbjct: 535 VGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDKLHERVVGQDEAVRLVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R G FLF GP GK EL K +AN L+D+ D HLI DM + E S+
Sbjct: 592 RSGLSDPNRPYGSFLFLGPTGVGKTELCKTLANFLFDSED---HLIRIDMSEFMEKHSVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + +LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFGVLLQVL--DDGRMTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A G V + F+P + +D+
Sbjct: 707 QGRTVDFKNTVIVMTSNLGSQMIQQMEGDDYQVVKLAVMGEVK----NYFRPEFINRIDE 762
Query: 389 LVV 391
+VV
Sbjct: 763 VVV 765
>gi|254380625|ref|ZP_04995991.1| chaperone protein clpB [Streptomyces sp. Mg1]
gi|194339536|gb|EDX20502.1| chaperone protein clpB [Streptomyces sp. Mg1]
Length = 879
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 202/424 (47%), Gaps = 63/424 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVKIQDTALVSAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE TD +S++ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEDAALSKE-TDPASKT-RLEELRRELADLRGEADAKHAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK---RVKDYSKI-------LDQIDARVHGKFKEKLA---------- 168
Q + H+A+ R D ++ L ++ R+ + +E+LA
Sbjct: 478 QELRQELEQVRHEAEEAERAYDLNRAAELRYGSLQDLERRLAAE-EEQLAAKQGQNRLLR 536
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
V EEIAE+ + TG+P + E+ +R+ L++RV GQ++A+ ++ +A+ + +
Sbjct: 537 EVVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRAR 596
Query: 227 AAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
+ + RR +G F+F GP GK ELAK +A L+D+ +N ++ DM Y E ++
Sbjct: 597 SGIR--DPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEEN---MVRLDMSEYQERHTV 651
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSVVLFD+IEKA++ + N LL+IL D R
Sbjct: 652 SRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQIL--DDGRITD 709
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+IIMTS++ E + E+ A + E+ G F+P L +D
Sbjct: 710 AQGRTVDFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGH-FRPEFLNRVD 768
Query: 388 KLVV 391
+V+
Sbjct: 769 DIVL 772
>gi|430761748|ref|YP_007217605.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011372|gb|AGA34124.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 857
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 199/425 (46%), Gaps = 78/425 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++Q R +L ++ ID++ + R D +E+D+
Sbjct: 361 HGIEITDPAIVAAAQLSQ--RYITDRQLPDKAIDLVDEASSRIRMEIDSKPEEMDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR---------------------SFW---------LRQIDN 111
L + +E E + KE TD +SR W QI
Sbjct: 419 LIQLKIEREAMKKE-TDEASRKRLDALEDEIERLEREYSDLEEIWKSEKAAVTGAAQIKE 477
Query: 112 ELKDAFFELVSFVKL----RM-QVEYDDFVSCVHDAKRVKDYSKILDQ---IDARVHGKF 163
+L+ A EL + + RM +++Y R+ + K L+Q ++ R
Sbjct: 478 DLERARMELETARRAGDLNRMSELQYG----------RIPELQKALEQAAELETRETRLL 527
Query: 164 KEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALT 223
+ K V EE+AEV S+ TGIP S +++ +R++ + +RV GQ++A+ + A+
Sbjct: 528 RNK--VTDEEVAEVVSRWTGIPVSKMLEGEKDKLLRMEEAVGQRVVGQDEAVRAVANAIR 585
Query: 224 KPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ A+ GLS R G FLF GP GK EL KA+A L+D D ++ DM + E
Sbjct: 586 R---ARAGLSDPNRPSGSFLFLGPTGVGKTELTKALAAFLFDTEDA---MVRIDMSEFME 639
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
S+ + L V+++PYSV+L D++EKA+ + N+LL++L D
Sbjct: 640 KHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDG 697
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLL 386
R D NT+I+MTS+L + + E+ Y + V EV GS F+P + +
Sbjct: 698 RLTDGHGRTVDFRNTVIVMTSNLGSQLIQEMAGEEHYAQMKAAVMEVVGSHFRPEFINRV 757
Query: 387 DKLVV 391
D +VV
Sbjct: 758 DDVVV 762
>gi|424766004|ref|ZP_18193366.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX1337RF]
gi|402413011|gb|EJV45362.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX1337RF]
Length = 869
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 153/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ +++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + A +VN + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + +R + + +++ A IA NA YG
Sbjct: 766 I---LFTPLSLDNVKGIVDKMVAQLAQRL--EHQEILLTIRDEAKTWIAENAYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|339627474|ref|YP_004719117.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus TPY]
gi|379008153|ref|YP_005257604.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus DSM 10332]
gi|339285263|gb|AEJ39374.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus TPY]
gi|361054415|gb|AEW05932.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus DSM 10332]
Length = 861
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 186/383 (48%), Gaps = 57/383 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+R++ R L ++ ID++ + D +ELD+ +
Sbjct: 362 HGVRIRDSALVAAARLSH--RYITDRYLPDKAIDLVDEAASHLRVEMDSLPEELDELERR 419
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL------KDAFFE-------LVSFVK-LR 127
+ +E E L KE+ D +++ R ++ EL +DA LV+ V+ L+
Sbjct: 420 RIQMEIEREALGKEEDDPPTKARLAR-LEAELAELRERRDALMARWEQEKALVNRVRELK 478
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKLA---VD 170
Q++ A+R D ++ LD+ ARV + +L V
Sbjct: 479 HQIDEAQIEEA--RAERQGDLARAAELRYGVLLNLRKELDEAQARVEALGESRLMREEVT 536
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
++IA++ +K TGIP + E+ + ++ RL +RV GQ A+ + A+ + A+
Sbjct: 537 EQDIAQIVAKWTGIPVARLLEGEREKLLHMEDRLAERVVGQRQAVTAVANAVRR---ARA 593
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS RR +G FLF GP GK ELAKA+A L+D+ +N L+ DM Y E ++
Sbjct: 594 GLSDPRRPMGSFLFLGPTGVGKTELAKALAAFLFDD---ENALVRIDMSEYMERHAVSRL 650
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L +++RPYSVVL D+IEKA+ + N+LL++L D R
Sbjct: 651 IGAPPGYVGYEEGGQLTEAIRRRPYSVVLLDEIEKAHPEVFNILLQVL--DDGRLTDGQG 708
Query: 338 AAFDLTNTLIIMTSDLKDEQVYE 360
D NT+IIMTS+L + + E
Sbjct: 709 RTVDFRNTVIIMTSNLASQVILE 731
>gi|255319673|ref|ZP_05360882.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
SK82]
gi|262378533|ref|ZP_06071690.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
gi|255303290|gb|EET82498.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
SK82]
gi|262299818|gb|EEY87730.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
Length = 859
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 201/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVKILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKD---AFFELVSFVKLRMQ 129
L + ++ E VK+D D S+S + +QI+ N+L++ A LV K + Q
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKSEVNYLEKQIEEVQKEYNDLEEVWKAEKTLVEGTK-KAQ 473
Query: 130 VEYDDFVSCVHDAKRVKDYS--------------KILDQIDARVHGKFKEKL---AVDVE 172
VE D + A+R D++ K L+Q D + + KL V
Sbjct: 474 VELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLEQ-DEVIEDHEEPKLLRNKVTDN 532
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHNRVVGQDEAVIAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ A+ + V S F+P + +D+LV+
Sbjct: 705 IDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMSAVSHHFRPEFINRIDELVI 760
>gi|421464124|ref|ZP_15912817.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
WC-A-157]
gi|400206498|gb|EJO37475.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
WC-A-157]
Length = 859
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 201/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVKILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKD---AFFELVSFVKLRMQ 129
L + ++ E VK+D D S+S + +QI+ N+L++ A LV K + Q
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKSEVNYLEKQIEEVQKEYNDLEEVWKAEKTLVEGTK-KAQ 473
Query: 130 VEYDDFVSCVHDAKRVKDYS--------------KILDQIDARVHGKFKEKL---AVDVE 172
VE D + A+R D++ K L+Q D + + KL V
Sbjct: 474 VELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLEQ-DEVIEDHEEPKLLRNKVTDN 532
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHNRVVGQDEAVIAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ A+ + V S F+P + +D+LV+
Sbjct: 705 IDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMSAVSHHFRPEFINRIDELVI 760
>gi|390572032|ref|ZP_10252259.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|420256959|ref|ZP_14759764.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
gi|389936015|gb|EIM97916.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|398042076|gb|EJL35121.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
Length = 865
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHQRVVGQDEAITAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D D HLI DM + E S+
Sbjct: 596 --GLSDPNRPYGSFLFLGPTGVGKTELCKALAAFLFDAED---HLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M+ A V E F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQSMVGQPEEAVKDAVWEEVKLHFRPEFLNRIDDVVV 767
>gi|107028974|ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116689868|ref|YP_835491.1| ATPase [Burkholderia cenocepacia HI2424]
gi|105898138|gb|ABF81096.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116647957|gb|ABK08598.1| ATPase AAA-2 domain protein [Burkholderia cenocepacia HI2424]
Length = 865
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMTGAPQDEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|417983425|ref|ZP_12624063.1| ClpB family protein [Lactobacillus casei 21/1]
gi|410528371|gb|EKQ03224.1| ClpB family protein [Lactobacillus casei 21/1]
Length = 868
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 136/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L++RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLQQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|170733207|ref|YP_001765154.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
gi|169816449|gb|ACA91032.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
Length = 865
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMTGAPQDEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|269101906|ref|ZP_06154603.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
gi|268161804|gb|EEZ40300.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
Length = 857
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIA+V SK TGIP + ++ +R++ L +RV GQN+A++ + A+ + +A GL
Sbjct: 535 EIADVLSKATGIPVAKMLEGERDKLLRMEEELHRRVIGQNEAVEAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL K++AN L+D+ D ++ DM + E S+
Sbjct: 592 ADPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSEDA---MVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L +++ E + Y V +V G F+P + +D+ VV
Sbjct: 707 VDFRNTVIIMTSNLGSDRIQEHFGSLDYEGLKALVMDVVGQHFRPEFINRVDETVV 762
>gi|254248039|ref|ZP_04941360.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
gi|124872815|gb|EAY64531.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
Length = 865
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMTGAPQDEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|260219645|emb|CBA26490.1| Chaperone protein clpB [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 863
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + ++ ++++G+L+ RV GQ +AI + A+ + +
Sbjct: 535 VGAEEIAEVVSRATGIPVAKMMQGERDKLLQMEGKLRDRVVGQEEAIAAVSNAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R G FLF GP GK EL KA+A L+ D++ HL+ DM + E S+
Sbjct: 592 RSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLVRIDMSEFMEKHSVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PY+V+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEAVRRKPYAVLLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+I+MTS++ Q+ + M+ Y V E VTG L F+P L +D+ VV
Sbjct: 707 QGRTVDFKNTVIVMTSNI-GSQLIQSMVGQDYEDVKEAVTGELKNHFRPEFLNRIDETVV 765
>gi|171317872|ref|ZP_02907049.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
gi|171096941|gb|EDT41811.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
Length = 865
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQHEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNLGS-QVIQAMTGAPQEEIKDAVWIEVKQHFRPEFLNRIDDVVV 767
>gi|8575704|gb|AAF78058.1|AF263561_3 ClpB protease [secondary endosymbiont of Glycaspis brimblecombei]
Length = 857
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S E+ + ++ L KRV GQN+A+D + A+ + +A GL
Sbjct: 535 EIAEILARWTGIPVSKMLESEREKLLHMEQDLHKRVIGQNEAVDAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+AN L+ D+D+ ++ DM + E ++
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKALANFLF---DSDDAMVRIDMSEFMEKHTVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++RPYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E + Y V EV F+P + +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGSLGYDEMKELVMEVVSRSFRPEFINRIDEVVV 762
>gi|56479246|ref|YP_160835.1| ClpB protein [Aromatoleum aromaticum EbN1]
gi|56315289|emb|CAI09934.1| ClpB protein [Aromatoleum aromaticum EbN1]
Length = 860
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 533 VGTEEIAEVVSRATGIPVSKMMQGEREKLLKMEERLHQRVVGQDEAVRLVADAIRRSRA- 591
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K +A L+ D++ HLI DM + E S+
Sbjct: 592 --GLSDENRPYGSFLFLGPTGVGKTELCKTLAEFLF---DSEEHLIRIDMSEFMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + ++V+ A V + F+P + +D+
Sbjct: 705 QGRTVDFKNTVIVMTSNLGSQMIQQMAGDDHQVIKLAVMAEVK----TYFRPEFVNRIDE 760
Query: 389 LVV 391
+VV
Sbjct: 761 VVV 763
>gi|392401358|ref|YP_006437958.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis Cp162]
gi|390532436|gb|AFM08165.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis Cp162]
Length = 849
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
+V S TGIPA E+ +R++ L RV GQ +A++ + +A+ + +A
Sbjct: 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|375092863|ref|ZP_09739128.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
gi|374653596|gb|EHR48429.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
Length = 889
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 192/425 (45%), Gaps = 65/425 (15%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A ++ R + L ++ ID++ + D ELD+
Sbjct: 363 LEIFHGVKIQDSALVAAVTLSH--RYISDRFLPDKAIDLVDEACAMLRTEIDSMPAELDE 420
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE TD +S+S L ++ EL D A +E ++
Sbjct: 421 LTRRVMRLEIEEAALAKE-TDPASQS-RLTELRKELADLRAEADATRAQWEAERSALRKV 478
Query: 129 QVEYDDFVSCVHDAKRV-KDY--------------------SKILDQIDARVHGKFKEKL 167
Q + HDA+ +DY Q+ + G+ +
Sbjct: 479 QALRQEIDQVRHDAELAERDYDLNRAAELRHGTLPELERRLEAEEQQLTTKQGGRRLLRE 538
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V +EIA + S+ TGIP S E+ +R+ L +RV GQ++A+ ++ +A+ + ++
Sbjct: 539 VVTADEIAAIVSRWTGIPVSRLQEGEREKLLRLDEILHERVVGQDEAVQLVADAIIRARS 598
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K RR +G F+F GP GK ELAK +A L+D DN ++ DM Y E ++
Sbjct: 599 GIK--DPRRPIGSFVFLGPTGVGKTELAKTLAAALFDTADN---MVRLDMSEYQERHTVS 653
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD+IEKA++ + N LL++L D R
Sbjct: 654 RLVGAPPGYVGFEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQVL--DDGRLTDA 711
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG---------RVNEVTGSLFKPSLLKLL 386
D NT+IIMTS++ E + + AT G RV F+P L +
Sbjct: 712 QGRTVDFRNTVIIMTSNIGSEFLLD---GATAGGEIKPDARERVMAALRGHFRPEFLNRI 768
Query: 387 DKLVV 391
D +V+
Sbjct: 769 DDIVL 773
>gi|373494780|ref|ZP_09585379.1| chaperone ClpB [Eubacterium infirmum F0142]
gi|371967824|gb|EHO85292.1| chaperone ClpB [Eubacterium infirmum F0142]
Length = 861
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 127/243 (52%), Gaps = 29/243 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VDVEEIAEV S+ TGIP S E+ +++ L KRV GQ++A+ + +A+ + +A
Sbjct: 532 VDVEEIAEVVSQWTGIPVSKLVESEREKLLKLPEILHKRVIGQDEAVVAVSDAILRARAG 591
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELAKA++ L+D N +I DM Y E S+
Sbjct: 592 LK--DENRPIGSFIFMGPTGVGKTELAKALSEALFDTEKN---MIRIDMSEYMEKHSVSR 646
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 647 LVGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQLL--DDGRLTDNQ 704
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTG--------SLFKPSLLKLLDK 388
D NT+II+TS++ ++ + + G+++E S F+P + +D
Sbjct: 705 GRTVDFKNTIIILTSNIGSRELIDRIEEG--GKISEEVKEDVISKLHSFFRPEFINRIDD 762
Query: 389 LVV 391
+V
Sbjct: 763 TIV 765
>gi|373461715|ref|ZP_09553453.1| chaperone ClpB [Prevotella maculosa OT 289]
gi|371951607|gb|EHO69452.1| chaperone ClpB [Prevotella maculosa OT 289]
Length = 825
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 203/416 (48%), Gaps = 55/416 (13%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H+++IQD+A A ++++ R + L ++ ID++ + + RD +ELD+
Sbjct: 355 ENHHKVRIQDDACIAAVKLSE--RYISDRFLPDKAIDLMDEAAAKLRMERDSVPEELDEL 412
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAF-----------FELVSFVKLR 127
+ L++ +E + +++E+ D +F ++I ELKD E+ +L+
Sbjct: 413 ERTLKQKEIERQAILREN-DTEKIAFLEKEI-AELKDKVKTFRARWEAQKGEVDKISQLK 470
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKI-------LDQID----------ARVHGKFKEKLAVD 170
Q E + A+R +Y ++ + QID ++ G+ + V
Sbjct: 471 EQKE--NLKREAEQAEREGNYQRVAEIRYGEMKQIDDEIERHRNEISKQEGESLIREEVT 528
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
++IAEV S+ TGIP S ++ + ++ L KRV GQN+AID + A+ + +A +
Sbjct: 529 ADDIAEVVSRWTGIPVSRMLQSERDKLLHLEEELHKRVIGQNEAIDAVCNAVRRSRAGLQ 588
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
+R + F+F G GK ELAKA+A L+ +++N + DM Y E S+
Sbjct: 589 --DPKRPIASFIFLGTTGVGKTELAKALAEYLF---NDENMMTRIDMSEYQEKFSVTRLI 643
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSVVLFD+IEKA+ + N LL++L D R
Sbjct: 644 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVL--DDGRLTDNKGR 701
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDL 394
+ NT+IIMTS+ EQ+ +M R++++ F P + + K+V + L
Sbjct: 702 LVNFKNTIIIMTSNATREQLTHLMRPEFLNRIDDII--TFHPLTKEEIGKVVELQL 755
>gi|93005671|ref|YP_580108.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
gi|92393349|gb|ABE74624.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
Length = 865
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 199/420 (47%), Gaps = 62/420 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + IQD A+ A+R++ R +L ++ ID++ + R D + L K
Sbjct: 358 HGVDIQDSAIIAAARMSH--RYITDRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSR 415
Query: 82 LRRAVVEYEQLVKED--TDHSSRSFWLRQIDNELKDAFFEL-------VSFVKLRMQV-- 130
L + ++ E L E+ + R QI+ EL+ + +L + VK Q+
Sbjct: 416 LIQLKMQREVLKNEEDAGAQAERKVLDAQIE-ELEKEYADLNEIWQAEKALVKGSQQLKD 474
Query: 131 EYDDFVSCVHDAKRVKDY---SKI----LDQIDARVH----GKFKEKLA----------- 168
E D A R DY SK+ + Q++ R+H + KE+
Sbjct: 475 ELDKARIAYDKASREGDYEIMSKLQYETIPQLERRIHESDLAEQKEQTGENSGVKLLRNK 534
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EIAEV + TGIP S ++ + ++ +L +RV GQ++A++ + A+ + +A
Sbjct: 535 VTDNEIAEVVAAATGIPVSKMMQGERDKMLAMEEKLHERVIGQDEAVEAVANAVRRSRA- 593
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K++AN L+D+ D ++ DM Y E S+
Sbjct: 594 --GLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSED---AIVRIDMSEYMEKHSVS 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 649 RLVGAPPGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPDVFNILLQVL--DDGRLTDS 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L ++ E M+ +Y V + G F+P + +D++VV
Sbjct: 707 QGRVVDFKNTVIIMTSNLGSHKIQE-MVGESYEDIKAEVMDSVGQHFRPEFVNRIDEIVV 765
>gi|313143871|ref|ZP_07806064.1| chaperone protein clpB [Helicobacter cinaedi CCUG 18818]
gi|313128902|gb|EFR46519.1| chaperone protein clpB [Helicobacter cinaedi CCUG 18818]
gi|396078592|dbj|BAM31968.1| ATP-dependent Clp protease ATP-binding subunit [Helicobacter
cinaedi ATCC BAA-847]
Length = 861
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 194/425 (45%), Gaps = 64/425 (15%)
Query: 17 SLEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELD 76
+LE H + I D AL A++++ R L ++ ID++ + + EL
Sbjct: 355 NLEAHHNVNITDLALIAAAKLSS--RYITDRFLPDKAIDLIDEAAAELKMQIESEPLELS 412
Query: 77 KHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVS-----------FVK 125
K K + VE + L E TD + + +ID EL++ E +S F +
Sbjct: 413 KVKKQIANLEVERQALNMEKTDFNQAR--ITEIDKELENLKEEKISLNGRFEQEKNVFTQ 470
Query: 126 L-RMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKL----------------- 167
+ ++ E D +AKR DYSK +ID +GK + L
Sbjct: 471 IANIKAELDSLRRESENAKRSGDYSKAA-EID---YGKIPQTLNKEKELQDQWEQMQKNG 526
Query: 168 -----AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
AV E IA V S+ +G+P +ER + ++ L K V GQ AI I A+
Sbjct: 527 TLLKNAVTQESIASVVSRWSGVPIKKMLQSQKERILDIESELTKSVVGQESAIKAIARAI 586
Query: 223 TKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYT 281
+ KA GLS + R +G FLF GP GK + AK +A L+DN + L+ DM Y
Sbjct: 587 KRNKA---GLSDANRPIGSFLFLGPTGVGKTQCAKTLAEFLFDNAKS---LVRIDMSEYM 640
Query: 282 ELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDF 329
E ++ + L ++++PYS+VLFD++EKA+ + N+LL++L D
Sbjct: 641 EKHAVSRLVGAPPGYVGYEEGGVLTEAIRRKPYSIVLFDEVEKAHPDVFNILLQVL--DD 698
Query: 330 NRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM-LTATYGRVNEVTGSLFKPSLLKLLDK 388
R + D +NT+II+TS++ +++ E+ V E FKP L LD
Sbjct: 699 GRLSDNKGVVVDFSNTIIILTSNIASDKILELQDKEQKQNAVKEALRMYFKPEFLNRLDD 758
Query: 389 LVVID 393
+V+ +
Sbjct: 759 VVIFN 763
>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
Length = 854
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 139/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 SLLHERVIGQDEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E+ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELAGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + GS F+P + +D++VV +
Sbjct: 736 RAAVMDAVGSHFRPEFINRIDEVVVFE 762
>gi|329122865|ref|ZP_08251437.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
gi|327472129|gb|EGF17567.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
Length = 856
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 193/413 (46%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E + V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGSKEESYSEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|260434470|ref|ZP_05788440.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8109]
gi|260412344|gb|EEX05640.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8109]
Length = 862
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 135/249 (54%), Gaps = 28/249 (11%)
Query: 161 GKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
G +E+++ D +IAEV +K TGIP + E+ ++++ L +RV GQ+ A+ + +
Sbjct: 530 GLLREEVSED--DIAEVIAKWTGIPLARLVQSEMEKLLQLEDDLHQRVIGQHQAVTAVAD 587
Query: 221 ALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGN 279
A+ + +A GLS R + FLF GP GK EL+KA+AN L+D++D ++ DM
Sbjct: 588 AIQRSRA---GLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDA---MVRIDMSE 641
Query: 280 YTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKT 327
Y E ++ + L V++RPY+V+LFD++EKA+ + N++L+IL
Sbjct: 642 YMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL-- 699
Query: 328 DFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVML-----TATYGRVNEVTGSLFKPSL 382
D R D TNT++I+TS++ + + E+ A RVN+ + F+P
Sbjct: 700 DDGRVTDGQGHTVDFTNTVLILTSNIGSQSILELASDPEQHGAMESRVNDALRAHFRPEF 759
Query: 383 LKLLDKLVV 391
L LD ++
Sbjct: 760 LNRLDDQII 768
>gi|300691677|ref|YP_003752672.1| chaperone [Ralstonia solanacearum PSI07]
gi|299078737|emb|CBJ51397.1| Chaperone [Ralstonia solanacearum PSI07]
gi|344169981|emb|CCA82355.1| chaperone [blood disease bacterium R229]
Length = 862
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ +R++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G+S + G FLF GP GK EL KA+A L+ D++ H+I DM + E S+
Sbjct: 593 --GISDENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHMIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + + ++ L G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNLGSQMIQQMATEPLDVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|387141420|ref|YP_005697398.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|355393211|gb|AER69876.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 1/06-A]
Length = 837
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 197/411 (47%), Gaps = 59/411 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
+V S TGIPA E+ +R++ L RV GQ +A++ + +A+ + A+ G++
Sbjct: 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRR---ARAGVADP 595
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 596 NRPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPP 652
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 653 GYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDF 710
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 711 RNTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|59801418|ref|YP_208130.1| ClpB protein [Neisseria gonorrhoeae FA 1090]
gi|268686347|ref|ZP_06153209.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
gi|293399276|ref|ZP_06643441.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
gi|59718313|gb|AAW89718.1| putative ClpB protein [Neisseria gonorrhoeae FA 1090]
gi|268626631|gb|EEZ59031.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
gi|291610690|gb|EFF39800.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
Length = 859
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQN+A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|359299621|ref|ZP_09185460.1| ATP-dependent Clp protease subunit B [Haemophilus [parainfluenzae]
CCUG 13788]
Length = 858
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 205/439 (46%), Gaps = 66/439 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 418 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELAAKEREYSELEEVWKAEKSALLGTQHIK 475
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE-----------------KLAVDVE 172
E ++ + A+R ++ K+ + ++ K+ + V E
Sbjct: 476 TELENARIAMDQARRENNFEKMSELQYGKIPALEKQLQEAVKREEEGSENHLLRTKVTDE 535
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 536 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 592
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S + +G FLF GP GK EL K +A+ L+D+ D ++ DM + E S+
Sbjct: 593 SDPNKPIGSFLFLGPTGVGKTELCKTLASFLFDDPD---AMVRIDMSEFMEKHSVSRLVG 649
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 650 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 707
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVVIDL- 394
D NT++IMTS+L + E A+Y V V G F+P + +D+ VV
Sbjct: 708 VDFRNTVVIMTSNLGSHLIQEAP-EASYAEMKALVMSVVGQHFRPEFINRIDETVVFHPL 766
Query: 395 ------AVPLLDTTRLLLR 407
A+ L+ RL+ R
Sbjct: 767 GQEHIRAIALIQLERLIKR 785
>gi|225023847|ref|ZP_03713039.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
23834]
gi|224943321|gb|EEG24530.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
23834]
Length = 857
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNADGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V + + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKKAVMDEVKAYFRPEMINRIDEVVV 763
>gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa Japonica Group]
Length = 912
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 205/417 (49%), Gaps = 58/417 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL +A++++ R L ++ ID++ + D +E+D +
Sbjct: 364 HGVRIQDRALVVAAQLSA--RYIMGRHLPDKAIDLVGEARANVRVQLDSQPEEIDNLERK 421
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS--- 137
+ VE+ L KE D +R +++ ++L+D L +K R + E D +
Sbjct: 422 RIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLT--MKYRKEKERIDEIRKLK 479
Query: 138 --------CVHDAKRVKDYSKILD-------QID---ARVHGKFKEKL----AVDVEEIA 175
+ +A+R D +++ D +ID A++ + E L V E+IA
Sbjct: 480 QRREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLESETGENLMLTETVGPEQIA 539
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S+ TGIP + EER + + RL +RV GQ +A+ + EA+ + +A GL
Sbjct: 540 EVVSRWTGIPVTRLGQNDEERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRA---GLGRP 596
Query: 236 RQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
+Q G FLF GP GK ELAKA+A +L+ D++N L+ DM Y E S+ +
Sbjct: 597 QQPTGSFLFLGPTGVGKTELAKALAEQLF---DDENLLVRIDMSEYMEQHSVARLIGAPP 653
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L+D++EKA+ ++ N LL++L D R D
Sbjct: 654 GYVGHEEGGQLTEQVRRRPYSVILYDEVEKAHVAVFNTLLQVL--DDGRLTDGQGRTVDF 711
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRV------NEVTGSLFKPSLLKLLDKLVVID 393
NT+IIMTS+L E + M+ +V EV F+P LL LD++V+ D
Sbjct: 712 RNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR-RHFRPELLNRLDEIVIFD 767
>gi|199598725|ref|ZP_03212139.1| Chaperone ClpB [Lactobacillus rhamnosus HN001]
gi|199590413|gb|EDY98505.1| Chaperone ClpB [Lactobacillus rhamnosus HN001]
Length = 868
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + G L +RV GQ++A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLAGNLHQRVIGQDEAVTAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYG-----RVNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T +V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQKDGTVSQQAKDQVRQLIGKAFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|379716162|ref|YP_005304499.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 316]
gi|377654868|gb|AFB73217.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 316]
Length = 849
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
+V S TGIPA E+ +R++ L RV GQ +A++ + +A+ + +A
Sbjct: 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|154151146|ref|YP_001404764.1| ATPase [Methanoregula boonei 6A8]
gi|153999698|gb|ABS56121.1| ATPase AAA-2 domain protein [Methanoregula boonei 6A8]
Length = 863
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 197/421 (46%), Gaps = 63/421 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+DEA+ A ++Q R + L ++ ID++ + + + +EL+K +
Sbjct: 359 HHVRIKDEAIIAAVELSQ--RYISDRFLPDKAIDLIDEAASKLRLEINSKPEELEKIERK 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRMQVEY 132
+ + +E E +K + D +I N ++ + ELV ++ R + E
Sbjct: 417 IHQLEIEREA-IKREKDQQKLKALNEEIGNLTEERNRLNAKWRSEKELVEQIQSR-KTEI 474
Query: 133 DDFVSCVHDAKRVKDYSKILDQIDARVHGK------FKEKLAV------------DVEEI 174
+D A+R D K+ + R+ KEKL V D EEI
Sbjct: 475 EDLKFEAERAERNGDLGKVAEIRYGRIPDNEKSMVALKEKLTVLQKDSALVNEEVDAEEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S+ TGIP S E+ + ++ L KRV GQ++AI + A+ + +A GL
Sbjct: 535 AEVVSRWTGIPVSRMLQSEREKLLSLEAELHKRVVGQDEAIAAVSNAIRRSRA---GLQD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
++R +G F+F G GK ELAKA+A L+ +N+N ++ DM Y E ++ +
Sbjct: 592 TKRPIGSFIFLGTTGVGKTELAKALAEFLF---NNENSMVRIDMSEYQERHTVSRLIGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVL D+IEKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEESGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVL--DDGRLTDNKGRTVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTAT-------YGRVNEVTGSLFK----PSLLKLLDKLV 390
NT+IIMTS++ + E M AT + R E L K P L +D+++
Sbjct: 707 FKNTIIIMTSNIGSHLIQENMEKATEKDRDELFERTREQVFDLLKKTIRPEFLNRIDEII 766
Query: 391 V 391
+
Sbjct: 767 M 767
>gi|434393586|ref|YP_007128533.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 7428]
gi|428265427|gb|AFZ31373.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 7428]
Length = 886
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 134/254 (52%), Gaps = 24/254 (9%)
Query: 155 IDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDA 214
ID + G + V +IAE+ +K TGIP + ++ ++++ L +RV GQ++A
Sbjct: 527 IDLQARGSTLLREEVTEADIAEIVAKWTGIPVNRLLASERQKLLQLESHLHERVIGQSEA 586
Query: 215 IDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIH 274
+ + A+ + +A K R +G FLF GP GK ELA+A+A L+D++D L+
Sbjct: 587 VSAVSAAIRRARAGMK--DPGRPIGSFLFMGPTGVGKTELARALAEFLFDSDDA---LVR 641
Query: 275 FDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLL 322
DM Y E S+ + L+ +++RPYSVVLFD++EKA+ + N+LL
Sbjct: 642 LDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLSEAIRRRPYSVVLFDEVEKAHPDVFNILL 701
Query: 323 KILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVML-TATYG----RVNEVTGSL 377
++L D R D NT+I+MTS++ E + +V + YG RV + S
Sbjct: 702 QVL--DDGRITDSQGRLVDFRNTVIVMTSNIGSEHILDVSGDDSKYGIMHKRVMDALRSH 759
Query: 378 FKPSLLKLLDKLVV 391
F+P L +D +++
Sbjct: 760 FRPEFLNRVDDIIL 773
>gi|377561491|ref|ZP_09790942.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
gi|377521335|dbj|GAB36107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
Length = 848
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 137/257 (53%), Gaps = 38/257 (14%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V V +IAEV S+ TGIP S T+ E+ + ++ L RV GQ+ A+ + EA+ + A
Sbjct: 491 VTVMDIAEVVSRQTGIPVSELTTEEREKLLGLENTLHDRVIGQDKAVTAVAEAVRR---A 547
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R +G FLF GP GK ELAKA+A ++ + D +I FDM + E ++
Sbjct: 548 RAGLSDPNRPIGSFLFLGPTGVGKTELAKALAAAVFGDED---RMIRFDMSEFQEKHNVA 604
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD+IEKA+ + N+LL++L + + T
Sbjct: 605 RLVGAPPGYVGYEDAGQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLLD---DGRVTD 661
Query: 336 GIA-AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL-------FKPSLLKLLD 387
G D NTL+IMTS++ +++L A G V +V + F+P L +D
Sbjct: 662 GQGRTVDFKNTLVIMTSNIG----SDLILNAPDGDVEKVVPDVMDLLRQRFRPEFLNRID 717
Query: 388 KLVVIDLAVPLLDTTRL 404
+ VV D LD T+L
Sbjct: 718 ETVVFD----RLDKTQL 730
>gi|319638313|ref|ZP_07993076.1| chaperone ClpB [Neisseria mucosa C102]
gi|317400586|gb|EFV81244.1| chaperone ClpB [Neisseria mucosa C102]
Length = 857
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE + S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDEASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPEGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|377573275|ref|ZP_09802342.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377538010|dbj|GAB47507.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 866
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V E+IAEV S+ TGIPA+ + R +R++ L RV GQ +A+D + EA+ +
Sbjct: 510 SVTAEDIAEVVSRTTGIPAAQLTEEERSRLLRLEETLHARVVGQEEAVDAVAEAVRR--- 566
Query: 228 AKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
A+ GL+ R +G FLF GP GK ELA+A+A L+ + D ++ FDM + E ++
Sbjct: 567 ARAGLADPNRPIGSFLFLGPTGVGKTELARALAEALFGDED---RMVRFDMSEFQERHTV 623
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V++ PY+VVL D+IEKA+ + N LL++L D R
Sbjct: 624 SRLVGAPPGYVGYEDAGQLTEAVRRTPYTVVLLDEIEKAHPDVFNTLLQLL--DAGRLTD 681
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE--------VTGSLFKPSLLKLL 386
D +NT++IMTS++ ++ ++ TA G+ E + G F+P L +
Sbjct: 682 GQGRTIDFSNTVVIMTSNVGADR---ILATAQAGQPLEELRETLMDLLGQQFRPEFLNRI 738
Query: 387 DKLVV 391
D++++
Sbjct: 739 DEIII 743
>gi|319897647|ref|YP_004135844.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
gi|317433153|emb|CBY81527.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
Length = 856
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 193/413 (46%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKSEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E + V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGSKEESYSEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|344171531|emb|CCA84146.1| chaperone [Ralstonia syzygii R24]
Length = 862
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ +R++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G+S + G FLF GP GK EL KA+A L+ D++ H+I DM + E S+
Sbjct: 593 --GISDENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHMIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVM---LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + + ++ L G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNLGSQMIQQMATEPLDVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|452876832|ref|ZP_21954166.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
gi|452186377|gb|EME13395.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
Length = 774
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 281 HGVSITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 338
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKD-------AFFELVSFVKLRMQ 129
L + +E E L KED + + + + +++ E D E+ +++ +
Sbjct: 339 LIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQK 398
Query: 130 VEY-----------DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+E D S + + D + L +D HGK + +L V EEI
Sbjct: 399 IEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQ--HGKTENQLLRNKVTDEEI 456
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ +R++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 457 AEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRA---GLAD 513
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 514 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 570
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L ++++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 571 PGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVD 628
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E+ A V + + F+P + +D++VV +
Sbjct: 629 FRNTVVVMTSNLGSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFE 682
>gi|422331580|ref|ZP_16412595.1| chaperone ClpB [Escherichia coli 4_1_47FAA]
gi|373247404|gb|EHP66847.1| chaperone ClpB [Escherichia coli 4_1_47FAA]
Length = 415
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL
Sbjct: 93 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GL 149
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+
Sbjct: 150 ADPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVG 206
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 207 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 264
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 265 VDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 320
>gi|402779464|ref|YP_006635010.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|402540404|gb|AFQ64553.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 857
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASLK-RLNMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQAEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 762
>gi|257094822|ref|YP_003168463.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047346|gb|ACV36534.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 859
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ R+ +RV GQ++A+ ++ A+ + +A
Sbjct: 533 VGTEEIAEVVSRATGIPVSKMMQGEREKLLQMEERMHQRVVGQDEAVRLVANAIRRSRA- 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 592 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRVDMSEFMEKHSVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+++MTS+L + + Y+++ A G V + F+P + +D+
Sbjct: 705 HGRTVDFKNTVVVMTSNLGSQMIQQMAGDDYQLIKLAVMGEVK----TYFRPEFINRIDE 760
Query: 389 LVV 391
+VV
Sbjct: 761 VVV 763
>gi|297204729|ref|ZP_06922126.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197710804|gb|EDY54838.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 879
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 202/424 (47%), Gaps = 63/424 (14%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD +L A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEVFHGVKIQDTSLVAAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE TD +S++ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEDAALSKE-TDPASKA-RLEELRRELADLRGEADAKHAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK---RVKDYSKI-------LDQIDARVHGKFKEKLA---------- 168
Q + H+A+ R D ++ L ++ R+ + +E+LA
Sbjct: 478 QELRQELEQVRHEAEEAERTYDLNRAAELRYGRLQDLERRLAAE-EEQLASKQGQNRLLR 536
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
V EEIAE+ + TGIP S E+ +R+ L++RV GQ++A+ ++ +A+ + +
Sbjct: 537 EVVTEEEIAEIVAAWTGIPVSRLQEGEREKLLRLDDILRERVIGQDEAVKLVADAIIRAR 596
Query: 227 AAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
+ + RR +G F+F GP GK ELAK +A L+D+ +N ++ DM Y E ++
Sbjct: 597 SGIR--DPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEEN---MVRLDMSEYQERHTV 651
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSVVLFD++EKA++ + N LL++L D R
Sbjct: 652 SRLVGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHTDVFNTLLQVL--DDGRITD 709
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+IIMTS++ E + E+ A + E+ G F+P L +D
Sbjct: 710 AQGRTVDFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGH-FRPEFLNRVD 768
Query: 388 KLVV 391
+V+
Sbjct: 769 DIVL 772
>gi|417644728|ref|ZP_12294697.1| ATP-dependent chaperone protein ClpB, partial [Staphylococcus
warneri VCU121]
gi|330684509|gb|EGG96223.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU121]
Length = 863
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLGDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKD----EQVYEV--MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ EQV E + +T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLEQVSETGDISESTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|218893637|ref|YP_002442506.1| ClpB protein [Pseudomonas aeruginosa LESB58]
gi|421182603|ref|ZP_15640077.1| ClpB protein [Pseudomonas aeruginosa E2]
gi|218773865|emb|CAW29679.1| ClpB protein [Pseudomonas aeruginosa LESB58]
gi|404541751|gb|EKA51100.1| ClpB protein [Pseudomonas aeruginosa E2]
Length = 854
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVSITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKD-------AFFELVSFVKLRMQ 129
L + +E E L KED + + + + +++ E D E+ +++ +
Sbjct: 419 LIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQK 478
Query: 130 VEY-----------DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+E D S + + D + L +D HGK + +L V EEI
Sbjct: 479 IEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQ--HGKTENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ +R++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L ++++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E+ A V + + F+P + +D++VV +
Sbjct: 709 FRNTVVVMTSNLGSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFE 762
>gi|15599738|ref|NP_253232.1| ClpB protein [Pseudomonas aeruginosa PAO1]
gi|116052687|ref|YP_793003.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|254238710|ref|ZP_04932033.1| ClpB protein [Pseudomonas aeruginosa C3719]
gi|296391363|ref|ZP_06880838.1| clpB protein [Pseudomonas aeruginosa PAb1]
gi|313107187|ref|ZP_07793386.1| clpB protein [Pseudomonas aeruginosa 39016]
gi|355652375|ref|ZP_09056771.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
gi|386060694|ref|YP_005977216.1| ClpB protein [Pseudomonas aeruginosa M18]
gi|386064010|ref|YP_005979314.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
gi|392986205|ref|YP_006484792.1| clpB protein [Pseudomonas aeruginosa DK2]
gi|416858844|ref|ZP_11913559.1| clpB protein [Pseudomonas aeruginosa 138244]
gi|416877399|ref|ZP_11919799.1| clpB protein [Pseudomonas aeruginosa 152504]
gi|418584141|ref|ZP_13148206.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590194|ref|ZP_13154107.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419752087|ref|ZP_14278496.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421155962|ref|ZP_15615421.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
gi|421170310|ref|ZP_15628272.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
gi|421176800|ref|ZP_15634459.1| ClpB protein [Pseudomonas aeruginosa CI27]
gi|421519096|ref|ZP_15965768.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
gi|424944692|ref|ZP_18360455.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
gi|451983095|ref|ZP_21931390.1| ClpB protein [Pseudomonas aeruginosa 18A]
gi|54035903|sp|Q9HVN5.1|CLPB_PSEAE RecName: Full=Chaperone protein ClpB
gi|9950786|gb|AAG07930.1|AE004868_1 ClpB protein [Pseudomonas aeruginosa PAO1]
gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa PA14]
gi|115587908|gb|ABJ13923.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170641|gb|EAZ56152.1| ClpB protein [Pseudomonas aeruginosa C3719]
gi|310879888|gb|EFQ38482.1| clpB protein [Pseudomonas aeruginosa 39016]
gi|334838994|gb|EGM17693.1| clpB protein [Pseudomonas aeruginosa 138244]
gi|334839646|gb|EGM18324.1| clpB protein [Pseudomonas aeruginosa 152504]
gi|346061138|dbj|GAA21021.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
gi|347307000|gb|AEO77114.1| ClpB protein [Pseudomonas aeruginosa M18]
gi|348032569|dbj|BAK87929.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
gi|354824206|gb|EHF08460.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
gi|375046270|gb|EHS38835.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050967|gb|EHS43442.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
gi|384401664|gb|EIE48018.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392321710|gb|AFM67090.1| clpB protein [Pseudomonas aeruginosa DK2]
gi|404346081|gb|EJZ72432.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
gi|404519555|gb|EKA30289.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
gi|404523842|gb|EKA34234.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
gi|404530437|gb|EKA40437.1| ClpB protein [Pseudomonas aeruginosa CI27]
gi|451759229|emb|CCQ83913.1| ClpB protein [Pseudomonas aeruginosa 18A]
gi|453046121|gb|EME93838.1| clpB protein [Pseudomonas aeruginosa PA21_ST175]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVSITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKD-------AFFELVSFVKLRMQ 129
L + +E E L KED + + + + +++ E D E+ +++ +
Sbjct: 419 LIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQK 478
Query: 130 VEY-----------DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+E D S + + D + L +D HGK + +L V EEI
Sbjct: 479 IEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQ--HGKTENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ +R++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L ++++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E+ A V + + F+P + +D++VV +
Sbjct: 709 FRNTVVVMTSNLGSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFE 762
>gi|452746805|ref|ZP_21946615.1| ClpB protein [Pseudomonas stutzeri NF13]
gi|452009282|gb|EME01505.1| ClpB protein [Pseudomonas stutzeri NF13]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 198/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVTITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVK---------LRMQVE 131
L + +E E L KED + + + + D +L+ + +L K ++Q +
Sbjct: 419 LIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQK 478
Query: 132 YDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+ + + A+R + D + L+ +D HGK + +L V EEI
Sbjct: 479 IEQAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQ--HGKKENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S ++ +R++ L RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+D + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+I+MTS+L Q+ E++ A V + F+P + +D++VV D
Sbjct: 709 FKNTVIVMTSNLGSAQIQELVGDPDAQRAAVMDAVAHHFRPEFINRIDEVVVFD 762
>gi|197284295|ref|YP_002150167.1| protein disaggregation chaperone [Proteus mirabilis HI4320]
gi|227357800|ref|ZP_03842148.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
gi|425067193|ref|ZP_18470309.1| chaperone ClpB [Proteus mirabilis WGLW6]
gi|425073294|ref|ZP_18476400.1| chaperone ClpB [Proteus mirabilis WGLW4]
gi|194681782|emb|CAR41000.1| chaperone ClpB (heat-shock protein F84.1) [Proteus mirabilis
HI4320]
gi|227161910|gb|EEI46928.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
gi|404595272|gb|EKA95817.1| chaperone ClpB [Proteus mirabilis WGLW4]
gi|404601488|gb|EKB01897.1| chaperone ClpB [Proteus mirabilis WGLW6]
Length = 858
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S E+ +R++ L +RV GQ++A++ + A+ + +A GL
Sbjct: 535 EIAEILARWTGIPVSRMLEGEREKLLRMEQELHRRVIGQDEAVNAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+A+ L+ D+D+ ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKALADFLF---DSDDAMVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E T Y V +V G F+P + +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGTLDYPAMKTIVMDVVGHHFRPEFINRIDEVVV 762
>gi|145628239|ref|ZP_01784040.1| ClpB [Haemophilus influenzae 22.1-21]
gi|145638337|ref|ZP_01793947.1| ClpB [Haemophilus influenzae PittII]
gi|144980014|gb|EDJ89673.1| ClpB [Haemophilus influenzae 22.1-21]
gi|145272666|gb|EDK12573.1| ClpB [Haemophilus influenzae PittII]
gi|309751479|gb|ADO81463.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2866]
Length = 856
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 194/418 (46%), Gaps = 65/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L KDE E+ V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|421524703|ref|ZP_15971324.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
gi|402751166|gb|EJX11679.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 ELLHQRVIGQSEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 736 RAAVMDAVGAHFRPEFINRIDEVVVFE 762
>gi|307263757|ref|ZP_07545363.1| hypothetical protein appser13_11680 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306870878|gb|EFN02616.1| hypothetical protein appser13_11680 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 857
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 24/236 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|114763550|ref|ZP_01442955.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pelagibaca
bermudensis HTCC2601]
gi|114543830|gb|EAU46842.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Roseovarius
sp. HTCC2601]
Length = 871
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 193/419 (46%), Gaps = 64/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + R D +ELD+
Sbjct: 361 HGVRISDSALVAAATLSH--RYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDQLDRV 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC--- 138
+ + +E E L ED D +S+ L ++ EL D E + + + Q E D S
Sbjct: 419 ILQMQIEVEALKLED-DAASKD-RLETLERELAD-HEERSAEMTAQWQAERDKLASARDV 475
Query: 139 ----------VHDAKRVKDYSKILDQIDARV-------------HGKFKEKLAVDVEEIA 175
+ AKR +++K + R+ G + AV E+IA
Sbjct: 476 KEQLDRMRADLEIAKREGNFAKAGELQYGRIPELEKKLSEAEEAEGDIMVEEAVRPEQIA 535
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV + TGIP S E+ +R++ L RV GQN A+ + A+ + A+ GL+
Sbjct: 536 EVVERWTGIPTSKMLEGEREKLLRMEDGLHNRVVGQNQAVRAVANAVRR---ARAGLNDE 592
Query: 236 -RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R LG FLF GP GK EL KA+A L+ D+DN ++ DM + E S+ +
Sbjct: 593 NRPLGSFLFLGPTGVGKTELTKAVAEFLF---DDDNAMVRIDMSEFMEKHSVARLIGAPP 649
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK----TDFNRKATRGIA 338
L V++RPY VVLFD++EKA+ + N+LL++L TD +
Sbjct: 650 GYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTV---- 705
Query: 339 AFDLTNTLIIMTSDLKDE---QVYEVMLTATYGR-VNEVTGSLFKPSLLKLLDKLVVID 393
D TLI++TS+L + Q+ E +A R V + + F+P L LD+ ++ D
Sbjct: 706 --DFKQTLIVLTSNLGSQALSQLPEGADSAQAKRDVMDAVRAHFRPEFLNRLDETIIFD 762
>gi|399543782|ref|YP_006557090.1| chaperone protein ClpB [Marinobacter sp. BSs20148]
gi|399159114|gb|AFP29677.1| Chaperone protein ClpB [Marinobacter sp. BSs20148]
Length = 858
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R A +L ++ ID++ + + D + LD+ +
Sbjct: 361 HGVEITDSAIIAAAKLSS--RYIADRKLPDKAIDLVDEAGSQIRMEMDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR------SFWLRQIDNELKDAFFELVSFVKL------RMQ 129
L + +E E L KE TD +S+ S + ++ E D E+ + K +++
Sbjct: 419 LIQLKIEREALKKE-TDPASKKRLEELSSVIDGVEREYAD-LEEVWNAEKAALHGSQKIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
E + + + A+R D ++ + Q+D + E + V EEI
Sbjct: 477 SELEQARTELESARRAGDLGRMSELQYGHIPELERQLDMASQAEMMEMTLLRNRVTEEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AE+ SK TGIP S ++ MR++ L KRV GQN+A++ + A+ + +A GLS
Sbjct: 537 AEIVSKWTGIPVSKMLEGERDKLMRMEEALHKRVIGQNEAVEAVANAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A+ L+D +D ++ DM + E S+ +
Sbjct: 594 PHRPNGSFLFLGPTGVGKTELCKALASFLFDTDDA---MVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L E+ Y+ M V G+ F+P + +D++VV
Sbjct: 709 FRNTVIVMTSNLGSGIIQRHAGEENYDAMKALVMDEV----GTHFRPEFINRVDEVVV 762
>gi|238897711|ref|YP_002923390.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229465468|gb|ACQ67242.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 857
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++Q R A +L ++ ID++ + D + LDK +
Sbjct: 361 HHVQITDPAIVAAASLSQ--RYIADRQLPDKAIDLIDEAAASIRMQIDSKPEALDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE + S + + +++ E K L ++ Q
Sbjct: 419 IIQLKLEQQALNKEQDEASKKRLKMLNDELEKKERQYSELEEEWKAEKASLTGTQNIKAQ 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE-KLAVDVE--------------EI 174
+E + A+RV D +K+ + ++ K+ + A + E EI
Sbjct: 479 LEEAKI--TLEQARRVSDLAKMSEMQYGKIPALEKQLQAATEKEMSSMKLLRNRVTDIEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV ++ TGIP E+ +R++ L ++V GQN+A+ + AL + +A GLS
Sbjct: 537 AEVLARWTGIPVDRMLESEREKLLRMEENLHQQVIGQNEAVIAVSNALRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A L+ + D ++ DM + E ++ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALAYFLFSSKD---AMVRIDMSEFMEKHTVSRLLGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSVVL D++EKA+ + N+LL++L D R D
Sbjct: 651 PGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHQDVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L + + E A Y V EV F+P + +D++VV
Sbjct: 709 FRNTVIIMTSNLGSDLIQERFSQADYSDMKKSVMEVVRRYFRPEFINRIDEVVV 762
>gi|445060124|ref|YP_007385528.1| clpB protein [Staphylococcus warneri SG1]
gi|443426181|gb|AGC91084.1| clpB protein [Staphylococcus warneri SG1]
Length = 868
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLGDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKD----EQVYEV--MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ EQV E + +T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLEQVSETGDISESTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|239636499|ref|ZP_04677501.1| ATP-dependent chaperone protein ClpB [Staphylococcus warneri
L37603]
gi|239597854|gb|EEQ80349.1| ATP-dependent chaperone protein ClpB [Staphylococcus warneri
L37603]
Length = 868
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLGDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKD----EQVYEV--MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ EQV E + +T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLEQVSETGDISESTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 861
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + + L R+ GQ++A++ + +++ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGEREKLLHMSNFLSSRIIGQSEAVNAVSDSILRARA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS + R G FLF GP GK ELAKA+A+ ++D+ D H+I DM + E S+
Sbjct: 593 --GLSDQSRPSGSFLFLGPTGVGKTELAKALADFMFDSRD---HMIRIDMSEFMEKHSVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHLDVFNVLLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT----GSLFKPSLLKLLDKLV 390
D NT+IIMTS+L + + M+ +TY + +V + +P L +D++V
Sbjct: 706 HGRTVDFRNTIIIMTSNLGSNHI-QNMMDSTYNEIRDVIMEELKATLRPEFLNRIDEIV 763
>gi|190150414|ref|YP_001968939.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189915545|gb|ACE61797.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 781
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 24/236 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|148545915|ref|YP_001266017.1| ATPase [Pseudomonas putida F1]
gi|148509973|gb|ABQ76833.1| ATPase AAA-2 domain protein [Pseudomonas putida F1]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 ELLHQRVIGQSEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 736 RAAVMDAVGAHFRPEFINRIDEVVVFE 762
>gi|317505630|ref|ZP_07963534.1| chaperone protein ClpB [Prevotella salivae DSM 15606]
gi|315663249|gb|EFV03012.1| chaperone protein ClpB [Prevotella salivae DSM 15606]
Length = 827
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 203/417 (48%), Gaps = 56/417 (13%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H+++IQD+A A ++++ R L ++ ID++ + + RD +ELD+
Sbjct: 356 ENHHKVRIQDDACIAAVKLSE--RYITDRFLPDKAIDLMDEAAAKLRMERDSVPEELDEM 413
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---AF--------FELVSFVKLR 127
+ L++ +E + +++E+ + + L + ELKD AF E+ +++
Sbjct: 414 ERTLKQKEIERQAILREN--NQQKIDQLEKEIAELKDKVNAFRARWEAQKGEVDHIQQIK 471
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKIL-----------DQIDA-RVH------GKFKEKLAV 169
Q+E A+R +Y ++ DQID R H G+ + V
Sbjct: 472 QQME--GLKLEAERAEREGNYQRVAEIRYGELKQLQDQIDTLRKHVDEEQGGEALIREEV 529
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
++IAEV S+ TGIP S E+ + ++ L KRV GQ++AID + A+ + +A
Sbjct: 530 TADDIAEVVSRWTGIPVSRMLQSEREKLLHLEDELHKRVIGQDEAIDAVCNAVRRSRAGL 589
Query: 230 KGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
+ +R + F+F G GK ELAKA+A L+ +++N L DM Y E S+
Sbjct: 590 Q--DPKRPIASFIFLGTTGVGKTELAKALAEYLF---NDENMLTRIDMSEYQEKFSVTRL 644
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSVVLFD+IEKA+ + N LL++L D R
Sbjct: 645 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVL--DDGRLTDNKG 702
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDL 394
D NT+IIMTS+ EQ+ ++M R++++ F P + + K+V + +
Sbjct: 703 RLVDFKNTIIIMTSNATREQLTKLMRPEFLNRIDDII--TFHPLTKEEIKKVVELQM 757
>gi|253681744|ref|ZP_04862541.1| ATP-dependent chaperone protein ClpB [Clostridium botulinum D str.
1873]
gi|253561456|gb|EES90908.1| ATP-dependent chaperone protein ClpB [Clostridium botulinum D str.
1873]
Length = 876
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 197/429 (45%), Gaps = 77/429 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R + ++ ID++ + + D ELD
Sbjct: 376 HGVRIHDSAIVAAAKLSH--RYIQDRYMPDKAIDLIDEAGAMIRSEIDSLPTELD----V 429
Query: 82 LRRAVV----EYEQLVKEDTDHSSRSFW--------LRQIDNELKDAF-FELVSFVKLR- 127
+RR + E E L KE+ D S + L++ +NE+ + E +++R
Sbjct: 430 IRRKQLMLETEKEALTKENDDESKKRLEILEKELAELKEKNNEMTAKYEKEKAHILEVRD 489
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAVD 170
++ + D+ + A+R D +++ + +++ +V K K+ K V
Sbjct: 490 LKTKLDEARGALERAERDYDLNRVAELKYGTIPELEQKVQEKEKDMEKNYEGALLKEEVT 549
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EI+E+ SK TGIP + ++ +R++ LKKRV GQ +A + A+ + +A K
Sbjct: 550 ESEISEIVSKWTGIPVTRLVEGERQKLLRLEDELKKRVIGQEEATVAVSNAVIRARAGLK 609
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
RR +G F+F GP GK ELAK +A L+D+ DN +I DM Y E ++
Sbjct: 610 --DERRPIGSFIFLGPTGVGKTELAKTLARNLFDSEDN---IIRIDMSEYMEKHAVSRLI 664
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
L V++ PYSV+LFD+IEKAN + N+ L+IL D R
Sbjct: 665 GPPPGYIGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQIL--DDGRLTDNKGK 722
Query: 339 AFDLTNTLIIMTSDLK-------------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+IIMTS+L +E + E ++ A R FKP L
Sbjct: 723 TVDFKNTIIIMTSNLGSSYLLENKNEDSIEENIREEVMNALKLR--------FKPEFLNR 774
Query: 386 LDKLVVIDL 394
+D +++ L
Sbjct: 775 IDDIILFKL 783
>gi|431925903|ref|YP_007238937.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
gi|431824190|gb|AGA85307.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 199/416 (47%), Gaps = 58/416 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVTITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
L + +E E L KED + + + L ++++++ E ++ ++Q
Sbjct: 419 LIQLKIEREALKKEDDEATKKR--LAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQ 476
Query: 130 VEYDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVE 172
+ + + + A+R + D + L+ +D HGK + +L V E
Sbjct: 477 QKIEQAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQ--HGKKENQLLRNKVTDE 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S ++ +R++ L RV GQ++A+ + A+ + +A GL
Sbjct: 535 EIAEVVSKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R G FLF GP GK EL KA+A L+ D + +I DM + E S+
Sbjct: 592 ADPNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEAMIRIDMSEFMEKHSVARLIG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVL D++EKA+ + N+LL++L+ D + G
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLE-DGRLTDSHG-RT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+I+MTS+L Q+ E++ A V + F+P + +D++VV D
Sbjct: 707 VDFKNTVIVMTSNLGSTQIQELVGDPGAQRAAVMDAVAHHFRPEFINRIDEVVVFD 762
>gi|392419721|ref|YP_006456325.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
gi|390981909|gb|AFM31902.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 198/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVTITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVK---------LRMQVE 131
L + +E E L KED + + + + D +L+ + +L K ++Q +
Sbjct: 419 LIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQK 478
Query: 132 YDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+ + + A+R + D + L+ +D HGK + +L V EEI
Sbjct: 479 IEQAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQ--HGKKENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S ++ +R++ L RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+D + +I DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA---MIRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+I+MTS+L Q+ E++ A V + F+P + +D++VV D
Sbjct: 709 FKNTVIVMTSNLGSAQIQELVGDPDAQRAAVMDAVAHHFRPEFINRIDEVVVFD 762
>gi|152985423|ref|YP_001350513.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
gi|150960581|gb|ABR82606.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
Length = 854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVSITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKD-------AFFELVSFVKLRMQ 129
L + +E E L KED + + + + +++ E D E+ +++ +
Sbjct: 419 LIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQK 478
Query: 130 VEY-----------DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+E D S + + D + L +D HGK + +L V EEI
Sbjct: 479 IEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQ--HGKTENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ +R++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L ++++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E+ A V + + F+P + +D++VV +
Sbjct: 709 FRNTVVVMTSNLGSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFE 762
>gi|420177592|ref|ZP_14683928.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM057]
gi|420179375|ref|ZP_14685668.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM053]
gi|394247976|gb|EJD93218.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM057]
gi|394253890|gb|EJD98878.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM053]
Length = 869
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAIVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|167383993|ref|XP_001736770.1| heat shock protein [Entamoeba dispar SAW760]
gi|165900729|gb|EDR26975.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 129/244 (52%), Gaps = 27/244 (11%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M+++ L KRV GQN+A+ + +A+ +
Sbjct: 531 LQVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIR-- 588
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 589 -SRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 644
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 645 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 702
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L E + + V R V E+ FKP L LD
Sbjct: 703 DGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLD 762
Query: 388 KLVV 391
++V
Sbjct: 763 DIIV 766
>gi|395447027|ref|YP_006387280.1| ATPase [Pseudomonas putida ND6]
gi|388561024|gb|AFK70165.1| ATPase [Pseudomonas putida ND6]
Length = 831
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 483 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 540
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 541 ELLHQRVIGQSEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 597
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 598 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 654
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 655 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 712
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 713 RAAVMDAVGAHFRPEFINRIDEVVVFE 739
>gi|418619363|ref|ZP_13182191.1| ATP-dependent chaperone protein ClpB [Staphylococcus hominis
VCU122]
gi|374824409|gb|EHR88367.1| ATP-dependent chaperone protein ClpB [Staphylococcus hominis
VCU122]
Length = 869
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 537 EEIGDIVSQWTGIPVSKLVETEREKLLNLSDILHERVVGQDKAVDLVSDAVVRARAGIK- 595
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E S+
Sbjct: 596 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHSVSRLIG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 652 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 709
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + + G + E T + FKP +L +D +V+
Sbjct: 710 VDFKNTIIIMTSNIGSQILLENVKDS--GEITESTEKAVMDSLHAFFKPEILNRMDDIVL 767
>gi|319775209|ref|YP_004137697.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
gi|317449800|emb|CBY86008.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
Length = 856
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 194/418 (46%), Gaps = 65/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L KDE E+ V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|78066617|ref|YP_369386.1| ATPase AAA [Burkholderia sp. 383]
gi|77967362|gb|ABB08742.1| AAA ATPase, ClpB [Burkholderia sp. 383]
Length = 865
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRSTGIPVSRMMQGEREKLLHIEEKLHERVVGQHEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M A + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMTGAPQEEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|307257140|ref|ZP_07538912.1| hypothetical protein appser10_11400 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864302|gb|EFM96213.1| hypothetical protein appser10_11400 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 857
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 24/236 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR---VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E G V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|300718033|ref|YP_003742836.1| Chaperone protein [Erwinia billingiae Eb661]
gi|299063869|emb|CAX60989.1| Chaperone protein [Erwinia billingiae Eb661]
Length = 857
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 196/418 (46%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAGSSIRMQIDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE D S + + +++ E K L ++ +
Sbjct: 419 IIQLKLEQQALKKETDDASIKRLSMLEDELNQKERDYSELEEEWKSEKASLSGTQTIKAE 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---KLAVDVE-------------- 172
+E + A+R+ D L Q+ +GK E +LA+ +
Sbjct: 479 LEQAKL--AMEQARRLGD----LAQMSELQYGKIPELEKQLALATQSEGKTMRLLRNRVT 532
Query: 173 --EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EIA+V ++ TGIP ++ +R++ L +RV GQN+A++ + A+ + +A
Sbjct: 533 EVEIADVLARWTGIPVDRMMEGERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ R +G FLF GP GK EL KA+AN ++ D+D+ ++ DM + E S+
Sbjct: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDDAMVRLDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E +Y + + V G F+P + +D+LVV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQERFGALSYPEMKDVVMTVVGQHFRPEFINRIDELVV 762
>gi|242373141|ref|ZP_04818715.1| S14 family endopeptidase ClpB [Staphylococcus epidermidis
M23864:W1]
gi|242349092|gb|EES40693.1| S14 family endopeptidase ClpB [Staphylococcus epidermidis
M23864:W1]
Length = 873
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 541 EEIGDIVSQWTGIPVSKLVETEREKLLHLGDILHKRVVGQDKAVDLVSDAVVRARAGIK- 599
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 600 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 655
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 656 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 713
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A G ++E T + FKP +L +D +V+
Sbjct: 714 VDFKNTIIIMTSNIGSQVLLENVKDA--GEISESTEKAVMDSLHAYFKPEILNRMDDIVL 771
>gi|71065383|ref|YP_264110.1| chaperonin clpA/B [Psychrobacter arcticus 273-4]
gi|71038368|gb|AAZ18676.1| putative chaperonin clpA/B [Psychrobacter arcticus 273-4]
Length = 865
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 196/420 (46%), Gaps = 62/420 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + IQD A+ A+R++ R +L ++ ID++ + R D + L K
Sbjct: 358 HGVDIQDSAIIAAARMSH--RYITDRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSR 415
Query: 82 LRRAVVEYEQLVKED--TDHSSRSFWLRQIDNELKDAFFEL-------VSFVKLRMQV-- 130
L + ++ E L E+ + R QI+ EL+ + +L + VK Q+
Sbjct: 416 LIQLKMQREVLKNEEDAGAQAERKVLDAQIE-ELEKEYADLNEIWQAEKALVKGSQQLKD 474
Query: 131 EYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH----GKFKEKLA----------- 168
E D A R DY + + Q++ R+H + KE+
Sbjct: 475 ELDKARIAYDKASREGDYETMSKLQYETIPQLERRIHESDLAEQKEQTGENSGVKLLRNK 534
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EIAEV + TGIP S ++ + ++ L +RV GQ++A++ + A+ + +A
Sbjct: 535 VTDNEIAEVVAAATGIPVSKMLQGERDKMLAMEENLHERVIGQDEAVEAVANAVRRSRA- 593
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K++AN L+D+ D ++ DM Y E S+
Sbjct: 594 --GLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSED---AIVRIDMSEYMEKHSVS 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 649 RLVGAPPGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPDVFNILLQVL--DDGRLTDS 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L ++ E M+ +Y V + G F+P + +D++VV
Sbjct: 707 QGRVVDFKNTVIIMTSNLGSHKIQE-MVGESYEDIKAEVMDSVGQHFRPEFVNRIDEIVV 765
>gi|290962751|ref|YP_003493933.1| chaperone [Streptomyces scabiei 87.22]
gi|260652277|emb|CBG75410.1| chaperone [Streptomyces scabiei 87.22]
Length = 879
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 201/425 (47%), Gaps = 65/425 (15%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ + R D ELD+
Sbjct: 362 LEIFHGVKIQDTALVSAATLSH--RYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD---------AFFELVSFVKLRM 128
+ R +E L KE TD +S++ L ++ EL D A +E R+
Sbjct: 420 ITRRVTRLEIEEAALSKE-TDPASKT-RLEELRRELADLRGEADAKHAQWEAERQAIRRV 477
Query: 129 QVEYDDFVSCVHDAK---RVKDYSKI-------LDQIDARVHGKFKEKLA---------- 168
Q + H+A+ R D ++ L ++ R+ + +E+LA
Sbjct: 478 QELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDVERRLKSE-EEQLAAKQGQNRLLR 536
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
V EEIAE+ + TG+P + E+ +R+ L++RV GQ++A+ ++ +A+ + +
Sbjct: 537 EVVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVQLVADAIIRAR 596
Query: 227 AAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
+ + RR +G F+F GP GK ELAK +A L+D+ +N ++ DM Y E ++
Sbjct: 597 SGIR--DPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEEN---MVRLDMSEYQERHTV 651
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSVVLFD+IEKA++ + N LL+IL D R
Sbjct: 652 SRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQIL--DDGRITD 709
Query: 335 RGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLL 386
D NT+IIMTS++ E + + G + V G L F+P L +
Sbjct: 710 AQGRTVDFRNTVIIMTSNIGSEHLLDG--ATAEGEIKPDSRALVMGELRGHFRPEFLNRV 767
Query: 387 DKLVV 391
D +V+
Sbjct: 768 DDIVL 772
>gi|225075318|ref|ZP_03718517.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
NRL30031/H210]
gi|224953493|gb|EEG34702.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
NRL30031/H210]
Length = 857
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 199/416 (47%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLSAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|190570794|ref|YP_001975152.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213019679|ref|ZP_03335484.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190357066|emb|CAQ54463.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212994720|gb|EEB55363.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 853
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 121/231 (52%), Gaps = 19/231 (8%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IA + SK TGIP +E+ + ++ + KRV GQ DAI+ I A+ + ++ +
Sbjct: 534 DIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGKRVIGQRDAIEAISNAVRRSRSGVQ-- 591
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ R G FLF GP GK ELAK++A L+D+ + L+ FDM Y E S+ +
Sbjct: 592 DTNRPFGSFLFLGPTGVGKTELAKSLAEFLFDDQ---SALLRFDMSEYMEKHSVSKLIGA 648
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY V+LFD+IEKAN I N+LL+IL D R
Sbjct: 649 PPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNILLQIL--DEGRLTDSHGKLI 706
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + V ++ S F+P L LD++++
Sbjct: 707 DFRNTILILTSNLGAEMMLRGATESVKDEVMKIVKSAFRPEFLNRLDEIII 757
>gi|342903657|ref|ZP_08725465.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
gi|341954908|gb|EGT81377.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
Length = 856
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 193/418 (46%), Gaps = 65/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELADKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L KDE E+ V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|228474362|ref|ZP_04059097.1| ATP-dependent chaperone protein ClpB [Staphylococcus hominis SK119]
gi|314936807|ref|ZP_07844154.1| ATP-dependent chaperone protein ClpB [Staphylococcus hominis subsp.
hominis C80]
gi|228271721|gb|EEK13068.1| ATP-dependent chaperone protein ClpB [Staphylococcus hominis SK119]
gi|313655426|gb|EFS19171.1| ATP-dependent chaperone protein ClpB [Staphylococcus hominis subsp.
hominis C80]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 537 EEIGDIVSQWTGIPVSKLVETEREKLLNLSDILHERVVGQDKAVDLVSDAVVRARAGIK- 595
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E S+
Sbjct: 596 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHSVSRLIG 651
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 652 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 709
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + + G + E T + FKP +L +D +V+
Sbjct: 710 VDFKNTIIIMTSNIGSQILLENVKDS--GEITESTEKAVMDSLHAFFKPEILNRMDDIVL 767
>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
Length = 858
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 202/440 (45%), Gaps = 77/440 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + + + +EL+ +
Sbjct: 359 HGVRIQDAALVSAATLSH--RYISDRFLPDKAIDLIDEAAAKLRTEMESMPEELENLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSS--------------------RSFW---------LRQIDNE 112
L + +E E L KE S R+ W L I E
Sbjct: 417 LMQLEIEREALRKEKDQASQERLNALEKEVAELRSERDTMRAQWEEEKSTIGGLGSIREE 476
Query: 113 LKDAFFELVSFVKLRMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---V 169
L+ A E+ + Q EYD + R+ K L + + R+ G + KL V
Sbjct: 477 LEKARHEME-----QAQREYDLNKVAEYQYGRIPALEKKLKEAEERL-GSDEAKLIKEDV 530
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EE+AEV S+ TGIP S +E+ +R+ L +RV GQ++A++ + +A+ + ++
Sbjct: 531 TPEEVAEVVSRWTGIPLSRLLEGEKEKLLRLDDILHERVIGQDEAVNAVTDAVIRARSGL 590
Query: 230 KGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
K +R +G F+F GP GK ELA+A+A L+D+ +N +I DM Y E ++
Sbjct: 591 K--DPKRPIGSFIFLGPTGVGKTELARALAESLFDSEEN---MIRIDMSEYMEKHTVARL 645
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSV+LFD+IEKA+ + N+LL+IL D R
Sbjct: 646 IGAPPGYVGYDEGGQLTEAVRRKPYSVLLFDEIEKAHYDVFNVLLQIL--DDGRLTDSHG 703
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEV------MLTATYGRVNEVTGSLFKPSLLKLLDKLV- 390
D NT+IIMTS+L + E + + +V S F+P L +D++V
Sbjct: 704 RTVDFKNTIIIMTSNLGSMHLLENAGESGDIAESVKDKVMAELRSHFRPEFLNRVDEIVL 763
Query: 391 -----------VIDLAVPLL 399
+IDL + LL
Sbjct: 764 FKPLTLEETKQIIDLQLELL 783
>gi|289423522|ref|ZP_06425323.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus anaerobius
653-L]
gi|289156024|gb|EFD04688.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus anaerobius
653-L]
Length = 864
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 133/247 (53%), Gaps = 34/247 (13%)
Query: 166 KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
K V EEIA++ SK TGIP +E+ +R++ +L +RV GQ++ + + +A+ +
Sbjct: 537 KQEVTEEEIADIISKWTGIPIKKLVESEKEKLLRLEDKLHERVIGQDEPVRAVSDAILRS 596
Query: 226 KAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELE 284
+A GLS + R LG F+F GP GK ELAK +A EL+D+ D+ +I DM Y E
Sbjct: 597 RA---GLSDQNRPLGSFIFLGPTGVGKTELAKTLARELFDSEDS---IIRLDMSEYMEKH 650
Query: 285 SIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRK 332
S+ L V+++PYSV+LFD+IEKA+ + N+ L+IL D R
Sbjct: 651 SVSRLVGPPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNMFLQIL--DEGRL 708
Query: 333 ATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL-------FKPSLLK 384
D NTLIIMTS++ + +L + G+++E V S+ FKP L
Sbjct: 709 TDNKGKTVDFKNTLIIMTSNIGSD-----ILLESKGKIDESVQKSVMDIMKFKFKPEFLN 763
Query: 385 LLDKLVV 391
+D +++
Sbjct: 764 RVDDIIM 770
>gi|107099795|ref|ZP_01363713.1| hypothetical protein PaerPA_01000813 [Pseudomonas aeruginosa PACS2]
Length = 849
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 356 HGVSITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 413
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKD-------AFFELVSFVKLRMQ 129
L + +E E L KED + + + + +++ E D E+ +++ +
Sbjct: 414 LIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQK 473
Query: 130 VEY-----------DDFVSCVH-DAKRVKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+E D S + + D + L +D HGK + +L V EEI
Sbjct: 474 IEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQ--HGKTENQLLRNKVTDEEI 531
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ +R++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 532 AEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRA---GLAD 588
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 589 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 645
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L ++++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 646 PGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVD 703
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E+ A V + + F+P + +D++VV +
Sbjct: 704 FRNTVVVMTSNLGSAQIQELAGDREAQRAAVMDAVNAHFRPEFINRIDEVVVFE 757
>gi|374705469|ref|ZP_09712339.1| ATP-dependent chaperone ClpB [Pseudomonas sp. S9]
Length = 854
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 199/414 (48%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
HR+ I D A+ A++++ R +L ++ ID++ + R D + LD+ +
Sbjct: 361 HRVAITDSAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID--------NELKDAFFELVSFVKLRMQVE-- 131
L + VE E L KED + + + + D +L+D + + V+ Q++
Sbjct: 419 LIQLKVEREALKKEDDEATLKRLEKLKDDIARLEREYADLEDIWKSEKAEVQGSAQIQQK 478
Query: 132 YDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+ + A+R + D + L +D HGK + +L V EEI
Sbjct: 479 IEQARQELETARRKSDLEAMAKLQYSVIPDLERSLQMVDQ--HGKTENQLLRSKVTEEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S ++ ++++ L +RV GQN+ + + A+ + +A GLS
Sbjct: 537 AEVVSKWTGIPVSKMLEGERDKLLKMEDLLHQRVIGQNEGVVAVANAVRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+++MTS+L Q+ E++ A + V + + F+P + +D++VV +
Sbjct: 709 FKNTVVVMTSNLGSAQIQELVGDREAQHAAVMDAVTTHFRPEFINRIDEVVVFE 762
>gi|33151758|ref|NP_873111.1| ATP-dependent Clp protease subunit B [Haemophilus ducreyi 35000HP]
gi|54035812|sp|Q7VNH1.1|CLPB_HAEDU RecName: Full=Chaperone protein ClpB
gi|33147979|gb|AAP95500.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP]
Length = 856
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 63/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK
Sbjct: 359 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDK---- 412
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------ 126
L R +++ + Q ++++ D +SR L ++D E+ E + ++
Sbjct: 413 LERRIIQLKLERQALQKEKDEASRQ-RLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQ 471
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE----------KLAV 169
++ E ++ + AKR ++ K+ + ++ ++ K + V
Sbjct: 472 HLKTELENARIAMDQAKRADNFEKMSELQYGTIPALEKQLQDAIKREEENNDHHLLRTKV 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV SK TGIP + +E+ +R++ L RV GQN+A++ + A+ + +A
Sbjct: 532 TEEEIAEVLSKATGIPITKMMEGEKEKLLRMEQVLHSRVIGQNEAVEAVANAILRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GL+ + +G FLF GP GK EL+K +AN L+ D++N ++ DM + E S+
Sbjct: 590 -GLADPNKPIGSFLFLGPTGVGKTELSKTLANFLF---DDENAIVRIDMSEFMEKHSVSR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 646 LVGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E+ A V V F+P + +D+ VV
Sbjct: 704 GRTVDFRNTVVIMTSNLGAHLIQENAEITYLAMKEMVMSVVSQHFRPEFINRIDETVV 761
>gi|389576708|ref|ZP_10166736.1| ATP-dependent chaperone ClpB [Eubacterium cellulosolvens 6]
gi|389312193|gb|EIM57126.1| ATP-dependent chaperone ClpB [Eubacterium cellulosolvens 6]
Length = 865
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 146/280 (52%), Gaps = 42/280 (15%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+VD +EIA + S+ TGIP + + + + + L +RV GQ++A++ + +A+ + KA
Sbjct: 530 SVDEDEIAAIVSRWTGIPVARLTQGEKNKILNLGTELHRRVIGQDEAVEKVADAIIRSKA 589
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K R +G FLF GP GK ELAK +A +L+ D++N+++ DM Y E S+
Sbjct: 590 GIK--DPTRPIGSFLFLGPTGVGKTELAKTLAEKLF---DDENNMVRIDMSEYMEKYSVS 644
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 645 RLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEVEKAHPDVFNVLLQVL--DDGRITDS 702
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLLD 387
D NT++IMTS++ + + E + G +N+ V G L F+P L LD
Sbjct: 703 QGRTVDFKNTILIMTSNIGSQYLLEGI--GEDGEINDSARELVMGDLRGHFRPEFLNRLD 760
Query: 388 KLV------------VIDLAVPLLDTTRLLLREWACEETK 415
+++ +IDL + L+ RL ++ A E T+
Sbjct: 761 EIILFRPLTKDNIGHIIDLQIADLN-RRLAAQQLAIELTE 799
>gi|385815128|ref|YP_005851519.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325125165|gb|ADY84495.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 819
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 40/267 (14%)
Query: 153 DQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQN 212
++I ++ GK +++ V E++A+V S TG+P + T +R ++G L +RV GQ+
Sbjct: 459 NEIAKKLAGKDEKRSVVGAEDVAKVVSIWTGVPVTQLKTSENKRLAHLEGILHERVIGQD 518
Query: 213 DAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
DA+ + A+ + ++ K R +G FLF GP GK ELAKA+A ++ + DN +
Sbjct: 519 DAVKAVANAIRRSRSGLK--DENRPIGSFLFLGPTGVGKTELAKAVAEAVFGSEDN---I 573
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM Y + ES S L+ V++ PYSVVLFD++EKAN I N+
Sbjct: 574 IRIDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNV 633
Query: 321 LLKILKTDF-----NRKATRGIAAFDLTNTLIIMTSDLKD---EQVYEVMLTATY----- 367
LL++L F RK D NT+IIMTS+L E V +A+
Sbjct: 634 LLRVLDEGFMTDSLGRK-------VDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGK 686
Query: 368 ---GRVNEVTGSLFKPSLLKLLDKLVV 391
+V T F+P L +D+ +V
Sbjct: 687 LIAEKVTRATKDFFRPEFLNRIDEKIV 713
>gi|330504856|ref|YP_004381725.1| ATPase [Pseudomonas mendocina NK-01]
gi|328919142|gb|AEB59973.1| ATPase [Pseudomonas mendocina NK-01]
Length = 854
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 201/414 (48%), Gaps = 54/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVTITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSS-RSFWLRQIDNELKDAFFELVSFVK---------LRMQVE 131
L + +E E L KED + + R L + +L+ + +L K ++Q +
Sbjct: 419 LIQLKIEREALKKEDDEATKKRLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQK 478
Query: 132 YDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVEEI 174
+ + + A+R + D + L +D HGK + +L V EEI
Sbjct: 479 IEQAKTELESARRKGDLNRMAELQYGVIPDLERSLQMVDQ--HGKSENQLLRNKVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ ++++G L +RV GQ++A+ + A+ + +A GL+
Sbjct: 537 AEVVSKWTGIPVSKMLEGEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRA---GLAD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + L+ DM + E S+ +
Sbjct: 594 PNRPSGSFLFLGPTGVGKTELCKALAEFLF---DTEEALVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVL D++EKA+ + N+LL++L+ D + G D
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT+I+MTS+L Q+ E++ A V + GS F+P + +D++VV +
Sbjct: 709 FKNTVIVMTSNLGSAQIQELVGDKEAQRAAVMDAVGSHFRPEFINRIDEVVVFE 762
>gi|420206681|ref|ZP_14712188.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM008]
gi|394277116|gb|EJE21445.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM008]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|386843476|ref|YP_006248534.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103777|gb|AEY92661.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796767|gb|AGF66816.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 847
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 25/234 (10%)
Query: 142 AKRVKDYSKILDQIDARVHGKFK----EKLAVDVEEIAEVASKLTGIPASWFCTKPEERY 197
AK+++D L Q A+V G K + L V E IAEV S+ TGIP S + +ER
Sbjct: 471 AKQLRDRIGELKQRIAQVTGGDKADEGQDLEVTAEAIAEVVSRQTGIPVSRLTQEEKERL 530
Query: 198 MRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS-RRQLGLFLFAGPNCSGKAELAK 256
+ ++ L +RV GQ +A+ V+ EA+ + +A GLSS R +G FLF GP GK ELA+
Sbjct: 531 LGLERHLHQRVVGQEEAVAVVSEAVLRSRA---GLSSPNRPIGSFLFLGPTGVGKTELAR 587
Query: 257 AIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSV 304
A+A L+ + D ++ DM Y E ++ + L +V++ PYS+
Sbjct: 588 ALAEALFGSEDR---MVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPYSL 644
Query: 305 VLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQV 358
+L D++EKA+ + N+LL++L D R D TNT+I+MTS+L E +
Sbjct: 645 LLLDEVEKAHPDVFNILLQVL--DDGRLTDSQGRTVDFTNTVIVMTSNLGSEAI 696
>gi|167386832|ref|XP_001733400.1| heat shock protein [Entamoeba dispar SAW760]
gi|165899086|gb|EDR25773.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 840
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 27/244 (11%)
Query: 167 LAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
L V +I EV S+ TGIP + + R M+++ L KRV GQN+A+ + +A+ +
Sbjct: 505 LQVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIR-- 562
Query: 227 AAKKGLSS-RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
++ GL + +R G F+F GP+ GK ELAKA+A EL+D+ N ++ DM Y E S
Sbjct: 563 -SRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQN---IVRIDMSEYMESHS 618
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L ++++PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 619 VSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLL--DEGRLT 676
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLD 387
D NT++IMTS+L E + + V R V E+ FKP L LD
Sbjct: 677 DGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLD 736
Query: 388 KLVV 391
+ V
Sbjct: 737 DITV 740
>gi|402758389|ref|ZP_10860645.1| clpB [Acinetobacter sp. NCTC 7422]
Length = 859
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKDAFFELVSFVK--LRMQV 130
L + ++ E VK+D D S++ +QI N+L++ + + V+ + QV
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQV 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLEQAEVAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVAKMLQGEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVID 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ AT V V + F+P + +D+LV+
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGEGATDDEVRTVVMNAVTQHFRPEFINRIDELVI 760
>gi|417986721|ref|ZP_12627286.1| ClpB family protein [Lactobacillus casei 32G]
gi|410524455|gb|EKP99363.1| ClpB family protein [Lactobacillus casei 32G]
Length = 873
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|386741176|ref|YP_006214356.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 31]
gi|384477870|gb|AFH91666.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 31]
Length = 849
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
+V S TG+PA E+ +R++ L RV GQ +A++ + +A+ + +A
Sbjct: 539 DVVSAWTGVPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|27467592|ref|NP_764229.1| clpB protein [Staphylococcus epidermidis ATCC 12228]
gi|282875523|ref|ZP_06284394.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
SK135]
gi|417655816|ref|ZP_12305511.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU028]
gi|417911858|ref|ZP_12555556.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU105]
gi|417914883|ref|ZP_12558517.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU109]
gi|418604308|ref|ZP_13167665.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU041]
gi|418610267|ref|ZP_13173384.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU065]
gi|418622720|ref|ZP_13185458.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU123]
gi|418624976|ref|ZP_13187635.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU125]
gi|418664265|ref|ZP_13225752.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU081]
gi|419767933|ref|ZP_14294075.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771265|ref|ZP_14297321.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-K]
gi|420187793|ref|ZP_14693810.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM039]
gi|420213290|ref|ZP_14718618.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM001]
gi|420218717|ref|ZP_14723773.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH04008]
gi|420231476|ref|ZP_14736125.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH051668]
gi|421607511|ref|ZP_16048752.1| clpB protein [Staphylococcus epidermidis AU12-03]
gi|54035845|sp|Q8CPT5.1|CLPB_STAES RecName: Full=Chaperone protein ClpB
gi|27315136|gb|AAO04271.1|AE016746_61 clpB protein [Staphylococcus epidermidis ATCC 12228]
gi|281295550|gb|EFA88073.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
SK135]
gi|329737550|gb|EGG73797.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU028]
gi|341650624|gb|EGS74442.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU109]
gi|341651816|gb|EGS75610.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU105]
gi|374404861|gb|EHQ75823.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU065]
gi|374405213|gb|EHQ76158.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU041]
gi|374410704|gb|EHQ81443.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU081]
gi|374825789|gb|EHR89709.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU123]
gi|374826067|gb|EHR89978.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU125]
gi|383361544|gb|EID38915.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-250]
gi|383361777|gb|EID39142.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-K]
gi|394255722|gb|EJE00667.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM039]
gi|394275951|gb|EJE20314.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM001]
gi|394291889|gb|EJE35668.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH04008]
gi|394302633|gb|EJE46073.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH051668]
gi|406656814|gb|EKC83212.1| clpB protein [Staphylococcus epidermidis AU12-03]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|420175267|ref|ZP_14681707.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM061]
gi|420193265|ref|ZP_14699119.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM023]
gi|394243729|gb|EJD89090.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM061]
gi|394260117|gb|EJE04937.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM023]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|417645629|ref|ZP_12295526.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU144]
gi|417659855|ref|ZP_12309452.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU045]
gi|417909986|ref|ZP_12553718.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU037]
gi|418617252|ref|ZP_13180156.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU120]
gi|420174050|ref|ZP_14680530.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM067]
gi|420182603|ref|ZP_14688739.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM049]
gi|420194123|ref|ZP_14699951.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM021]
gi|420198582|ref|ZP_14704287.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM020]
gi|420203472|ref|ZP_14709046.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM018]
gi|420210639|ref|ZP_14716060.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM003]
gi|420215706|ref|ZP_14720963.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH05005]
gi|420218436|ref|ZP_14723524.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH05001]
gi|420226793|ref|ZP_14731570.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH05003]
gi|420229114|ref|ZP_14733823.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH04003]
gi|420234140|ref|ZP_14738711.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH051475]
gi|329731911|gb|EGG68270.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU144]
gi|329734896|gb|EGG71196.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU045]
gi|341651868|gb|EGS75659.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU037]
gi|374819099|gb|EHR83230.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU120]
gi|394238455|gb|EJD83922.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM067]
gi|394250148|gb|EJD95350.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM049]
gi|394264070|gb|EJE08775.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM020]
gi|394266606|gb|EJE11235.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM021]
gi|394267495|gb|EJE12083.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM018]
gi|394275970|gb|EJE20332.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM003]
gi|394281478|gb|EJE25714.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH05005]
gi|394284345|gb|EJE28477.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH05001]
gi|394298077|gb|EJE41661.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH05003]
gi|394299553|gb|EJE43095.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH04003]
gi|394304557|gb|EJE47956.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH051475]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|329119993|ref|ZP_08248665.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
gi|327463906|gb|EGF10220.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
Length = 857
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 196/416 (47%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ GK KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGQQLQAAESNPEGKKANKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP + ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V E + F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEAVMEEVKAYFRPEMINRIDEVVV 763
>gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus epidermidis RP62A]
gi|418613117|ref|ZP_13176135.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU117]
gi|418626218|ref|ZP_13188840.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU126]
gi|81675085|sp|Q5HQI5.1|CLPB_STAEQ RecName: Full=Chaperone protein ClpB
gi|57637163|gb|AAW53951.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus epidermidis RP62A]
gi|374816865|gb|EHR81061.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU117]
gi|374833458|gb|EHR97139.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU126]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|418411431|ref|ZP_12984699.1| chaperone ClpB [Staphylococcus epidermidis BVS058A4]
gi|410892975|gb|EKS40766.1| chaperone ClpB [Staphylococcus epidermidis BVS058A4]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISNDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|416123899|ref|ZP_11595085.1| ATP-dependent chaperone ClpB [Staphylococcus epidermidis FRI909]
gi|420199610|ref|ZP_14705281.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM031]
gi|319401747|gb|EFV89955.1| ATP-dependent chaperone ClpB [Staphylococcus epidermidis FRI909]
gi|394271360|gb|EJE15853.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM031]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|145640973|ref|ZP_01796555.1| DNA polymerase I [Haemophilus influenzae R3021]
gi|145274487|gb|EDK14351.1| DNA polymerase I [Haemophilus influenzae 22.4-21]
Length = 708
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 195/418 (46%), Gaps = 65/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 213 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 270
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 271 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 328
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
E D + + A+R D Y +I D Q++ + KE + V EEI
Sbjct: 329 QELDTVKTELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEGKEMTLLRYRVTDEEI 388
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 389 AEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRA---GLSD 445
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 446 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDA---MVRIDMSEFMEKHSVSRLVGAP 502
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 503 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 560
Query: 342 LTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L KDE E+ V V F+P + +D+ VV
Sbjct: 561 FRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETVV 613
>gi|441153256|ref|ZP_20966245.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618490|gb|ELQ81560.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 830
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 35/287 (12%)
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLAV---DVEEIAEVASKLTG 183
R+ E D+ V D R + +D+ R+ G E+ V E+IAEV S+ TG
Sbjct: 447 RLNREKDEAVHN-EDYDRAAGLKRQIDETQERLSGLDGERAPVAEVTEEDIAEVVSRRTG 505
Query: 184 IPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLF 243
IP + ER +R++ L RV GQ++A+ + +A+ + +A R G FLF
Sbjct: 506 IPVAQLTATERERLIRLEETLHARVVGQDEAVTAVAQAVRRGRAGMG--DPDRPTGSFLF 563
Query: 244 AGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS----------- 292
GP GK ELAKAIA L+ D LI FDM + E ++ S
Sbjct: 564 LGPTGVGKTELAKAIAEILFGQED---RLIRFDMSEFQERHTVSRLVGSPPGYVGYDEAG 620
Query: 293 -LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTS 351
L V+++PYSV+LFD++EKA+ + NLLL++L D R D +T++IMTS
Sbjct: 621 QLTEAVRRKPYSVLLFDEVEKAHPDVFNLLLQVL--DDGRLTDAQGRTVDFRHTVVIMTS 678
Query: 352 DLKDEQVYEVMLTATYGRVNEVTGSL-------FKPSLLKLLDKLVV 391
+L + ++ +G V+E+ L F+P L +D++VV
Sbjct: 679 NLASQ-----LILNHHGAVDEIRDDLMAELRSHFRPEFLNRIDEVVV 720
>gi|418607599|ref|ZP_13170825.1| ATPase, AAA family [Staphylococcus epidermidis VCU057]
gi|374404209|gb|EHQ75190.1| ATPase, AAA family [Staphylococcus epidermidis VCU057]
Length = 608
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 277 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 335
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 336 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 391
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 392 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 449
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 450 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 507
>gi|418631575|ref|ZP_13194032.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU128]
gi|374834780|gb|EHR98416.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU128]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|418629805|ref|ZP_13192300.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU127]
gi|420165066|ref|ZP_14671776.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM088]
gi|374833035|gb|EHR96736.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU127]
gi|394236578|gb|EJD82093.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM088]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|293368352|ref|ZP_06614980.1| chaperone protein ClpB [Staphylococcus epidermidis M23864:W2(grey)]
gi|291317599|gb|EFE58017.1| chaperone protein ClpB [Staphylococcus epidermidis M23864:W2(grey)]
Length = 864
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 533 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 591
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 592 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 647
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 648 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 705
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 706 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 763
>gi|251810347|ref|ZP_04824820.1| S14 family endopeptidase ClpB [Staphylococcus epidermidis
BCM-HMP0060]
gi|251806128|gb|EES58785.1| S14 family endopeptidase ClpB [Staphylococcus epidermidis
BCM-HMP0060]
Length = 864
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 533 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 591
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 592 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 647
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 648 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 705
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 706 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 763
>gi|238896038|ref|YP_002920774.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238548356|dbj|BAH64707.1| ATP-dependent protease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 861
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 418
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 419 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 477
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 478 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQAEGKTMRLLRNKVTD 537
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 538 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 710 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 766
>gi|260880964|ref|ZP_05403276.2| ATP-dependent chaperone protein ClpB [Mitsuokella multacida DSM
20544]
gi|260850057|gb|EEX70064.1| ATP-dependent chaperone protein ClpB [Mitsuokella multacida DSM
20544]
Length = 878
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 121/235 (51%), Gaps = 19/235 (8%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IA+V S+ TGIP + T E+ + ++ L RV GQ++A+ + EA+ + +A
Sbjct: 545 VGEEDIAQVVSRWTGIPMTKMLTGEREKLLHLEDVLHARVVGQDEAVKAVSEAILRARAG 604
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELAK +A L+ D++ +I DM Y E S+
Sbjct: 605 IK--DPNRPIGSFIFLGPTGVGKTELAKTLAEALF---DDERSMIRIDMSEYMEKHSVSR 659
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSV+L D+IEKA+ + N+LL+IL D R
Sbjct: 660 LIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLLQIL--DDGRLTDGK 717
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ NT+IIMTS+L ++ G V E+ F+P L +D ++V
Sbjct: 718 GRVVNFKNTVIIMTSNLGSHEILNKSYEEAKGAVKEILKDYFRPEFLNRVDDIIV 772
>gi|119897857|ref|YP_933070.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Azoarcus sp.
BH72]
gi|119670270|emb|CAL94183.1| probable ATP-dependent Clp protease, ATP-binding subunit ClpB
[Azoarcus sp. BH72]
Length = 860
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ ++++ RL RV GQ++A+ ++ +A+ + +A
Sbjct: 533 VGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEERLHGRVVGQDEAVRLVSDAIRRSRA- 591
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL K +A L+ D++ HLI DM + E S+
Sbjct: 592 --GLADENRPYGSFLFLGPTGVGKTELCKTLAEFLF---DSEEHLIRIDMSEFMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A V + F+P + +D+
Sbjct: 705 QGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMAEVK----TFFRPEFINRIDE 760
Query: 389 LVV 391
+VV
Sbjct: 761 VVV 763
>gi|418634650|ref|ZP_13197042.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU129]
gi|420189170|ref|ZP_14695154.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM037]
gi|420203885|ref|ZP_14709446.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM015]
gi|374836577|gb|EHS00159.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU129]
gi|394262809|gb|EJE07564.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM037]
gi|394274467|gb|EJE18888.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM015]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|418326795|ref|ZP_12937973.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU071]
gi|365224720|gb|EHM65983.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU071]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|323703795|ref|ZP_08115433.1| ATP-dependent chaperone ClpB [Desulfotomaculum nigrificans DSM 574]
gi|333922407|ref|YP_004495987.1| ATP-dependent chaperone ClpB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323531264|gb|EGB21165.1| ATP-dependent chaperone ClpB [Desulfotomaculum nigrificans DSM 574]
gi|333747968|gb|AEF93075.1| ATP-dependent chaperone ClpB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 865
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 32/289 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IA V S+ TGIP +E+ + + L +RV GQ++A+ + +A+ + +A
Sbjct: 535 VDEEDIARVVSRWTGIPLEKLMEGEKEKLIHLDELLHRRVIGQHEAVQAVADAVLRARAG 594
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G F+F GP GK ELA+A+A L+D+ N +I DM Y E ++
Sbjct: 595 IK--DPNRPIGSFIFLGPTGVGKTELARALAQALFDDERN---MIRIDMSEYMEKHTVAR 649
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSV+LFD+IEKA+ + N++L+IL D R
Sbjct: 650 LIGAPPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNIMLQIL--DDGRLTDGQ 707
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLT--ATYGRVNEVTGSL----FKPSLLKLLDKLV 390
D NT+IIMTS++ ++ E Y ++ + L F+P L +D+ V
Sbjct: 708 GRTIDFKNTVIIMTSNIGSHEILEFQRKGDGDYRQMKKAVTDLLQRHFRPEFLNRVDETV 767
Query: 391 VIDLAVP--LLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIA 437
V P + T L+L A RR D+ + + S SA+V++A
Sbjct: 768 VFHALEPKHMQQITTLMLERLA-----RRIKDTARIELTWSDSAVVYLA 811
>gi|378980143|ref|YP_005228284.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|364519555|gb|AEW62683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
Length = 823
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 327 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 380
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 381 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 439
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 440 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 499
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 500 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 556
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 557 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 613
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 614 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 671
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 672 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 728
>gi|161524599|ref|YP_001579611.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189350645|ref|YP_001946273.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|160342028|gb|ABX15114.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189334667|dbj|BAG43737.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
Length = 865
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI+ + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAINAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQSMTGSPQDEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|104773532|ref|YP_618512.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|418035229|ref|ZP_12673687.1| hypothetical protein LDBUL1519_00387 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103422613|emb|CAI97218.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|354690647|gb|EHE90591.1| hypothetical protein LDBUL1519_00387 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 819
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 40/267 (14%)
Query: 153 DQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQN 212
++I ++ GK +++ V E++A+V S TG+P + T +R ++G L +RV GQ+
Sbjct: 459 NEIAKKLAGKDEKRSVVGAEDVAKVVSIWTGVPVTQLKTSENKRLAHLEGILHERVIGQD 518
Query: 213 DAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
DA+ + A+ + ++ K R +G FLF GP GK ELAKA+A ++ + DN +
Sbjct: 519 DAVKAVANAIRRSRSGLK--DENRPIGSFLFLGPTGVGKTELAKAVAEAVFGSEDN---I 573
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM Y + ES S L+ V++ PYSVVLFD++EKAN I N+
Sbjct: 574 IRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNV 633
Query: 321 LLKILKTDF-----NRKATRGIAAFDLTNTLIIMTSDLKD---EQVYEVMLTATY----- 367
LL++L F RK D NT+IIMTS+L E V +A+
Sbjct: 634 LLRVLDEGFMTDSLGRK-------VDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGK 686
Query: 368 ---GRVNEVTGSLFKPSLLKLLDKLVV 391
+V T F+P L +D+ +V
Sbjct: 687 LIAEKVTRATKDFFRPEFLNRIDEKIV 713
>gi|116513529|ref|YP_812435.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|418029954|ref|ZP_12668471.1| hypothetical protein LDBUL1632_01265 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|116092844|gb|ABJ57997.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|354688417|gb|EHE88456.1| hypothetical protein LDBUL1632_01265 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 819
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 40/267 (14%)
Query: 153 DQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQN 212
++I ++ GK +++ V E++A+V S TG+P + T +R ++G L +RV GQ+
Sbjct: 459 NEIAKKLAGKDEKRSVVGAEDVAKVVSIWTGVPVTQLKTSENKRLAHLEGILHERVIGQD 518
Query: 213 DAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHL 272
DA+ + A+ + ++ K R +G FLF GP GK ELAKA+A ++ + DN +
Sbjct: 519 DAVKAVANAIRRSRSGLK--DENRPIGSFLFLGPTGVGKTELAKAVAEAVFGSEDN---I 573
Query: 273 IHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNL 320
I DM Y + ES S L+ V++ PYSVVLFD++EKAN I N+
Sbjct: 574 IRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNV 633
Query: 321 LLKILKTDF-----NRKATRGIAAFDLTNTLIIMTSDLKD---EQVYEVMLTATY----- 367
LL++L F RK D NT+IIMTS+L E V +A+
Sbjct: 634 LLRVLDEGFMTDSLGRK-------VDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGK 686
Query: 368 ---GRVNEVTGSLFKPSLLKLLDKLVV 391
+V T F+P L +D+ +V
Sbjct: 687 LIAEKVTRATKDFFRPEFLNRIDEKIV 713
>gi|384919885|ref|ZP_10019915.1| chaperone protein clpB [Citreicella sp. 357]
gi|384466271|gb|EIE50786.1| chaperone protein clpB [Citreicella sp. 357]
Length = 871
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 194/419 (46%), Gaps = 64/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + R D +ELD+
Sbjct: 361 HGVRISDSALVAAATLSH--RYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDQIDRQ 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC--- 138
+ + +E E L ED D +SR L ++ EL + E + + + Q E D S
Sbjct: 419 ILQMQIEVEALKLED-DQASRD-RLETLERELAE-VEERSAEMTAQWQAERDKLASSRDL 475
Query: 139 ----------VHDAKRVKDYSKILDQIDARV-------------HGKFKEKLAVDVEEIA 175
+ AKR ++++ + R+ G + AV E+IA
Sbjct: 476 KEQLDKMRAELEIAKREGNFARAGELQYGRIPEIERQLSEADESEGDVMVEEAVRPEQIA 535
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV + TGIP S E+ +R++ L KRV GQN A+ + A+ + A+ GL+
Sbjct: 536 EVVERWTGIPTSKMLEGDREKLLRMEDSLHKRVVGQNQAVRAVANAVRR---ARAGLNDE 592
Query: 236 -RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R LG FLF GP GK EL KA+A L+ D+DN ++ DM + E S+ +
Sbjct: 593 NRPLGSFLFLGPTGVGKTELTKAVAEFLF---DDDNAMVRVDMSEFMEKHSVARLIGAPP 649
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK----TDFNRKATRGIA 338
L V++RPY VVLFD++EKA+ + N+LL++L TD +
Sbjct: 650 GYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGR------ 703
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTA--TYGR--VNEVTGSLFKPSLLKLLDKLVVID 393
D TLI++TS+L + + ++ A + R V + + F+P L LD+ ++ D
Sbjct: 704 TVDFKQTLIVLTSNLGSQALSQLPEGADSAHARRDVMDAVRAHFRPEFLNRLDETIIFD 762
>gi|418327755|ref|ZP_12938894.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
14.1.R1.SE]
gi|418615718|ref|ZP_13178656.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU118]
gi|365232634|gb|EHM73623.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
14.1.R1.SE]
gi|374816562|gb|EHR80765.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
VCU118]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|221198117|ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|221208392|ref|ZP_03581395.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221215144|ref|ZP_03588111.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|421471427|ref|ZP_15919714.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|421475449|ref|ZP_15923396.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
gi|221165080|gb|EED97559.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|221171805|gb|EEE04249.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221182049|gb|EEE14450.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|400225514|gb|EJO55675.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|400230122|gb|EJO59935.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
Length = 865
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI+ + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAINAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQSMTGSPQDEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|73541668|ref|YP_296188.1| ATPase AAA [Ralstonia eutropha JMP134]
gi|72119081|gb|AAZ61344.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha
JMP134]
Length = 862
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ RL RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDRLHNRVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ + G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 --GLADENKPYGSFLFLGPTGVGKTELCKALAEFLF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M+ A G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNL-GSQIIQSMVGEPQEAVKGAVWQEVRTHFRPEFLNRIDEVVV 764
>gi|353327808|ref|ZP_08970135.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 853
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 121/231 (52%), Gaps = 19/231 (8%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IA + SK TGIP +E+ + ++ + KRV GQ DAI+ I A+ + ++ +
Sbjct: 534 DIANIVSKWTGIPVDNMIHSEKEKLLNMENEIGKRVIGQRDAIEAISNAVRRSRSGVQ-- 591
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ R G FLF GP GK ELAK++A L+D+ + L+ FDM Y E S+ +
Sbjct: 592 DTNRPFGSFLFLGPTGVGKTELAKSLAEFLFDDQ---SALLRFDMSEYMEKHSVSKLIGA 648
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPY V+LFD+IEKAN I N+LL+IL D R
Sbjct: 649 PPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNILLQIL--DEGRLTDSHGKLI 706
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++I+TS+L E + + V ++ S F+P L LD++++
Sbjct: 707 DFRNTILILTSNLGAEVMLRGATESVKDEVMKIVKSAFRPEFLNRLDEIII 757
>gi|407794890|ref|ZP_11141910.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina xiamenensis 10-D-4]
gi|407210650|gb|EKE80528.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina xiamenensis 10-D-4]
Length = 857
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 199/412 (48%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + R D ++LD+ +
Sbjct: 361 HAVEITDPAIVAAASLSH--RYISDRKLPDKAIDLIDEAGSRIRMQIDSKPEDLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFEL-------------VSFVKLR 127
+ + +E + L KE D S + L Q + +E + F EL +K +
Sbjct: 419 IIQLKLEQQALQKEKDDASKKRLDLLQEELDEQERKFKELEEVWNTEKAAVQGTQNIKAQ 478
Query: 128 M-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEIAE 176
+ Q D D D R+ + Y +I Q+D + + ++ K V EE+AE
Sbjct: 479 LEQARTDMDIARRAGDLNRMSELQYGRIPALERQLDLALQAEMQDMSLLKNRVTDEEVAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S+ TGIP + E+ ++++ +L RV GQN+A+D + A+ + +A GLS
Sbjct: 539 VLSRWTGIPVNKMLEGEREKLLQMEQQLHSRVVGQNEAVDAVANAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL+KA+A L+ D D+ ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELSKALAQFLF---DTDSAMVRIDMSEFMEKHSVARLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L + + E TY V +V F+P L +D+ VV
Sbjct: 711 NTVIIMTSNLGSDLIQEKANEHTYEEMKAAVMDVLVHHFRPEFLNRVDETVV 762
>gi|418323941|ref|ZP_12935198.1| ATP-dependent chaperone protein ClpB [Staphylococcus pettenkoferi
VCU012]
gi|365228870|gb|EHM70043.1| ATP-dependent chaperone protein ClpB [Staphylococcus pettenkoferi
VCU012]
Length = 870
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSSWTGIPVSKLVESEREKLLGLSDILHERVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E S+
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASTLF---DSEKHMIRIDMSEYMEKHSVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D+IEKA++ + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTESVRRNPYSVILLDEIEKAHTDVFNVLLQIL--DEGRLTDSQGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E V+ T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQILLENVKDSGVITEDTEKAVMDSLNAYFKPEILNRMDDIVL 768
>gi|259909394|ref|YP_002649750.1| protein disaggregation chaperone [Erwinia pyrifoliae Ep1/96]
gi|387872373|ref|YP_005803754.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
gi|224965016|emb|CAX56546.1| Chaperone protein [Erwinia pyrifoliae Ep1/96]
gi|283479467|emb|CAY75383.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
Length = 857
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 68/420 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R +++ +Q +K+++D +S L+ ++ EL K L
Sbjct: 415 LERRIIQLKLEQQALKKESDEASIK-RLKMLEGELSQKESEYSELEEEWKAEKASLSGTQ 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFK-----EKLA 168
++ Q+E + A+R D Y KI D Q+ A + K
Sbjct: 474 HIKAQLEQAKL--NMEQARRQGDLGQMSELQYGKIPDLEKQLAAATQSEGKTMRLLRNRV 531
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
DVE IA+V ++ TGIP + ++ +R++ +L RV GQ++A++ + A+ + +A
Sbjct: 532 TDVE-IADVLARWTGIPVARMMEGERDKLLRMEQQLHTRVIGQHEAVEAVSNAIRRSRA- 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 590 --GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVS 644
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 702
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E +YG + E+ S+ F+P + +D+LVV
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGEMKELVMSVVSHSFRPEFINRIDELVV 762
>gi|420162754|ref|ZP_14669509.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM095]
gi|420167196|ref|ZP_14673857.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM087]
gi|394235751|gb|EJD81301.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM095]
gi|394238825|gb|EJD84282.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM087]
Length = 869
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISNDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|302185257|ref|ZP_07261930.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Pseudomonas syringae pv. syringae 642]
Length = 854
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|325982689|ref|YP_004295091.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
gi|325532208|gb|ADZ26929.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
Length = 860
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 130/241 (53%), Gaps = 28/241 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGEREKLLLMEQKLHDRVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 593 --GLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRVDMSEFMEKHSVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L LV+++PY+V+L D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTELVRRKPYAVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRV-----NEVTGSLFKPSLLKLLDKLV 390
D NT+I+MTS+L + + E M Y + NEV + F+P + +D++V
Sbjct: 706 QGRTVDFKNTVIVMTSNLGSQMIQE-MSGNEYQAIKQAVMNEVK-TYFRPEFINRIDEVV 763
Query: 391 V 391
V
Sbjct: 764 V 764
>gi|424741779|ref|ZP_18170120.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-141]
gi|422944552|gb|EKU39543.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
WC-141]
Length = 859
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 125/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ + ++G L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLNMEGFLHDRVVGQDEAVVAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ AT V + S F+P + +D+LV+
Sbjct: 705 VDFKNTVIVMTSNLGSQDVRELGEGATDDEVRAIVMSAVSQHFRPEFINRIDELVI 760
>gi|422607938|ref|ZP_16679930.1| clpB protein, partial [Pseudomonas syringae pv. mori str. 301020]
gi|330891572|gb|EGH24233.1| clpB protein [Pseudomonas syringae pv. mori str. 301020]
Length = 422
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 74 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 131
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 132 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 188
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 189 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 245
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 246 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 303
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 304 RAAVMDAVGTHFRPEFVNRIDEVVIFE 330
>gi|153820387|ref|ZP_01973054.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
gi|126509069|gb|EAZ71663.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
Length = 697
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 375 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 431
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 432 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 488
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 489 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 546
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 547 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 602
>gi|422016627|ref|ZP_16363208.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
gi|414092612|gb|EKT54287.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
Length = 857
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 198/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+ + +E + L KE D S + L ++ EL + E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASKKR--LEMLEGELAEKEREYSSLEEEWKAEKASLTGTQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDA--RVHGKFKEKL---AVDVEE 173
E ++ + A+R D +K+ + Q++A + GK + L DVE
Sbjct: 477 AELENARYEIEKARRSGDLAKMSELQYGRIPELEKQLEAATKAEGKSMKLLRNKVTDVE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAE+ ++ TGIP S E+ +R++ +L +RV GQ++A+ + A+ + +A GLS
Sbjct: 536 IAEILARWTGIPVSRMLESEREKLLRMEQQLHRRVIGQDEAVVAVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G F+F GP GK EL KA+AN ++ D+D+ ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFMFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHSVSRLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E Y V EV F+P + +D++VV
Sbjct: 708 DFRNTVIIMTSNLGSDLIQERFGVIGYSEMKDMVMEVVAHSFRPEFINRIDEVVV 762
>gi|397693566|ref|YP_006531446.1| ATPase, partial [Pseudomonas putida DOT-T1E]
gi|397330296|gb|AFO46655.1| ATPase [Pseudomonas putida DOT-T1E]
Length = 386
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 36/271 (13%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 38 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 95
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 96 ELLHQRVIGQSEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 152
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 153 FLFDTEEA---MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 209
Query: 309 KIEKANSSILNLLLKILK----TDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM-- 362
++EKA+ + N+LL++L+ TD + + D NT+I+MTS+L Q+ E++
Sbjct: 210 EVEKAHPDVFNVLLQVLEDGRLTDSHGRTV------DFRNTVIVMTSNLGSAQIQELVGD 263
Query: 363 LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
A V + G+ F+P + +D++VV +
Sbjct: 264 REAQRAAVMDAVGAHFRPEFINRIDEVVVFE 294
>gi|422641872|ref|ZP_16705293.1| AAA ATPase, central region, partial [Pseudomonas syringae Cit 7]
gi|330954257|gb|EGH54517.1| AAA ATPase, central region [Pseudomonas syringae Cit 7]
Length = 793
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|242242264|ref|ZP_04796709.1| S14 family endopeptidase ClpB [Staphylococcus epidermidis W23144]
gi|242234280|gb|EES36592.1| S14 family endopeptidase ClpB [Staphylococcus epidermidis W23144]
Length = 864
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 533 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 591
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 592 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 647
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 648 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 705
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 706 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 763
>gi|256372717|ref|YP_003110541.1| ATP-dependent chaperone ClpB [Acidimicrobium ferrooxidans DSM
10331]
gi|256009301|gb|ACU54868.1| ATP-dependent chaperone ClpB [Acidimicrobium ferrooxidans DSM
10331]
Length = 828
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 72/386 (18%)
Query: 49 LRERFIDILLKGIKRCLNSRDKYQKELDKHKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQ 108
L ++ ID++ + + R D +E+D + LR+ +E L E TD +SR R
Sbjct: 376 LPDKAIDLVDEAMARLRMEIDSRPEEIDSVERRLRQLEIERISLATE-TDRASRERLTR- 433
Query: 109 IDNELKDAFFELVSFVK---------------------LRMQVEYDDFVSCVHDAKRVKD 147
+D +++ EL + LR Q E + + A ++
Sbjct: 434 LDQDIEATKLELSELTRQWQAEREAIDVIRQRKEHLEELRAQSEAYERQGMLDRAAELR- 492
Query: 148 YSKI----------LDQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERY 197
Y +I +++ R G+ K VD E+IAEV + TGIP + E+
Sbjct: 493 YGEIPRLEREIEEATEELSKRQGGRRMLKEEVDPEDIAEVVAAATGIPVTKLLESETEKL 552
Query: 198 MRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR-RQLGLFLFAGPNCSGKAELAK 256
+ ++ L+ RV GQ++AID + A+ + +A G++ R R +G FLF GP GK E AK
Sbjct: 553 LHIEDALRARVVGQDEAIDAVANAIRRSRA---GIADRNRPIGSFLFLGPTGVGKTETAK 609
Query: 257 AIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSV 304
A+A L+ D++ +I DM Y E S+ + L V++RPY+V
Sbjct: 610 ALAEYLF---DDERAMIRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYAV 666
Query: 305 VLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLT 364
VLFD+IEKA++ + N+ L+IL D R + TNT++IMTS+L D+
Sbjct: 667 VLFDEIEKAHADVFNVFLQIL--DDGRLTDGQGRVVNFTNTILIMTSNLADD-------- 716
Query: 365 ATYGRVNEVTGSLFKPSLLKLLDKLV 390
FKP + +D++V
Sbjct: 717 ---------PRRFFKPEFVNRIDEIV 733
>gi|420185233|ref|ZP_14691328.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM040]
gi|394254967|gb|EJD99927.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIHLM040]
Length = 869
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|424826476|ref|ZP_18251361.1| clpB protein [Clostridium sporogenes PA 3679]
gi|365980921|gb|EHN16938.1| clpB protein [Clostridium sporogenes PA 3679]
Length = 866
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + D E+D K
Sbjct: 365 HGIRIHDSAIVAAAKLSS--RYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMDSMKRK 422
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVS--------FVKLR-MQVE 131
+ + +E E L KE D R L + +EL++ E+ + K+R ++ +
Sbjct: 423 IFQLEIEKEALSKERDVASKERLEALEKELSELQEKDKEMTAKYENEKSHITKIRDLKEK 482
Query: 132 YDDFVSCVHDAKRVKDYSKILDQ------------------IDARVHGKFKEKLAVDVEE 173
DD + A+R D +K+ + I +G K V +E
Sbjct: 483 LDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + ++ +++ +L+ RV GQ +A+ + A+ + +A K
Sbjct: 543 ISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQREAVKAVTNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R+ +G F+F GP GK ELAK +A L+D +N +I DM Y E S+ +
Sbjct: 601 PRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN---IIRIDMSEYMEKYSVSRLIGAP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQIL--DDGRLTDNKGKVID 715
Query: 342 LTNTLIIMTSDLK-----DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L D + E + + RV E + FKP L +D +++
Sbjct: 716 FKNTIIIMTSNLGSNYLLDNESKEGIDESVRVRVKEALKARFKPEFLNRVDDIIM 770
>gi|152988574|ref|YP_001345959.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PA7]
gi|452879079|ref|ZP_21956223.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa VRFPA01]
gi|150963732|gb|ABR85757.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PA7]
gi|452184314|gb|EME11332.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa VRFPA01]
Length = 932
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 144/276 (52%), Gaps = 36/276 (13%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ S+LTGIP + + E+ +R
Sbjct: 528 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISRLTGIPVTELTAEEREKLLR 585
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 586 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 642
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 643 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYEEGGQLTERVRRRPYSVIL 699
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L + + +
Sbjct: 700 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSDLIMKNAQAGE 757
Query: 367 YGR---------VNEVTGSLFKPSLLKLLDKLVVID 393
+ + +N + G F+P L LD+++V +
Sbjct: 758 FAQPPEKLKRELMNTLRGH-FRPEFLNRLDEVIVFE 792
>gi|330012953|ref|ZP_08307535.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
gi|419764286|ref|ZP_14290526.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|328533637|gb|EGF60348.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
gi|397742869|gb|EJK90087.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 861
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 418
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 419 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 477
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 478 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 537
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 538 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 710 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 766
>gi|385787426|ref|YP_005818535.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
gi|310766698|gb|ADP11648.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 68/420 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R +++ +Q +K+++D +S L+ ++ EL K L
Sbjct: 415 LERRIIQLKLEQQALKKESDEASIK-RLKMLEGELSQKESEYSELEEEWKAEKASLSGTQ 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFK-----EKLA 168
++ Q+E + A+R D Y KI D Q+ A + K
Sbjct: 474 HIKAQLEQAKL--NMEQARRQGDLGQMSELQYGKIPDLEKQLAAATQSEGKTMRLLRNRV 531
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
DVE IA+V ++ TGIP + ++ +R++ +L RV GQ++A++ + A+ + +A
Sbjct: 532 TDVE-IADVLARWTGIPVARMMEGERDKLLRMEQQLHTRVIGQHEAVEAVSNAIRRSRA- 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 590 --GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVS 644
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 702
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E +YG + E+ S+ F+P + +D+LVV
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGEMKELVMSVVSQNFRPEFINRIDELVV 762
>gi|227535160|ref|ZP_03965209.1| S14 family endopeptidase Clp [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187205|gb|EEI67272.1| S14 family endopeptidase Clp [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 868
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|424070606|ref|ZP_17808040.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440724230|ref|ZP_20904560.1| ATPase AAA [Pseudomonas syringae BRIP34876]
gi|440728950|ref|ZP_20909149.1| ATPase AAA [Pseudomonas syringae BRIP34881]
gi|408000304|gb|EKG40665.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440358167|gb|ELP95557.1| ATPase AAA [Pseudomonas syringae BRIP34876]
gi|440360351|gb|ELP97629.1| ATPase AAA [Pseudomonas syringae BRIP34881]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|397685796|ref|YP_006523115.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
gi|395807352|gb|AFN76757.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D+ + L +D HGK + +L V EEIAEV SK TGIP S ++ ++++
Sbjct: 506 IPDFERSLQMVDQ--HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GL+ R G FLF GP GK EL KA+A
Sbjct: 564 DLLHQRVIGQHEAVVSVANAVRRSRA---GLADPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + +I DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSTQIQELVGDPDAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + S F+P + +D++VV D
Sbjct: 736 RAAVMDAVSSHFRPEFINRIDEVVVFD 762
>gi|365139798|ref|ZP_09346062.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
gi|363654021|gb|EHL92952.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQAEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 762
>gi|289674876|ref|ZP_06495766.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal, partial
[Pseudomonas syringae pv. syringae FF5]
Length = 663
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 315 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 372
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 373 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 429
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 430 FLFDTEEA---MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 486
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 487 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 544
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 545 RAAVMDAVGTHFRPEFVNRIDEVVIFE 571
>gi|239631565|ref|ZP_04674596.1| chaperone ClpB [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066405|ref|YP_003788428.1| chaperone ClpB [Lactobacillus casei str. Zhang]
gi|417996214|ref|ZP_12636497.1| ClpB family protein [Lactobacillus casei M36]
gi|417999048|ref|ZP_12639261.1| ClpB family protein [Lactobacillus casei T71499]
gi|418001986|ref|ZP_12642113.1| ClpB family protein [Lactobacillus casei UCD174]
gi|418005058|ref|ZP_12645058.1| ClpB family protein [Lactobacillus casei UW1]
gi|418007950|ref|ZP_12647821.1| ClpB family protein [Lactobacillus casei UW4]
gi|418010808|ref|ZP_12650579.1| ClpB family protein [Lactobacillus casei Lc-10]
gi|418013701|ref|ZP_12653338.1| ClpB family protein [Lactobacillus casei Lpc-37]
gi|239526030|gb|EEQ65031.1| chaperone ClpB [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438812|gb|ADK18578.1| Chaperone ClpB [Lactobacillus casei str. Zhang]
gi|410535923|gb|EKQ10533.1| ClpB family protein [Lactobacillus casei M36]
gi|410539988|gb|EKQ14510.1| ClpB family protein [Lactobacillus casei T71499]
gi|410545137|gb|EKQ19442.1| ClpB family protein [Lactobacillus casei UCD174]
gi|410547709|gb|EKQ21935.1| ClpB family protein [Lactobacillus casei UW4]
gi|410548055|gb|EKQ22275.1| ClpB family protein [Lactobacillus casei UW1]
gi|410553387|gb|EKQ27390.1| ClpB family protein [Lactobacillus casei Lc-10]
gi|410555580|gb|EKQ29518.1| ClpB family protein [Lactobacillus casei Lpc-37]
Length = 868
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|119510404|ref|ZP_01629538.1| ATPase [Nodularia spumigena CCY9414]
gi|119464933|gb|EAW45836.1| ATPase [Nodularia spumigena CCY9414]
Length = 884
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 32/240 (13%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAE+ +K TGIP + ++ ++++ L +RV GQ++A+ + A+ + +A K
Sbjct: 544 DIAEIVAKWTGIPVNRLLASERQKLLQLETHLHQRVIGQHEAVAAVSAAIRRARAGMK-- 601
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK ELA+A+A L+D++D LI DM Y E S+ +
Sbjct: 602 DPGRPIGSFLFMGPTGVGKTELARALAQFLFDSDDA---LIRLDMSEYMEKHSVSRLVGA 658
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L+ V++ PYSVVLFD++EKA+ + N+LL++L D R A
Sbjct: 659 PPGYVGYEEGGQLSQAVRRHPYSVVLFDEVEKAHPDVFNILLQVL--DDGRITDSQGRAV 716
Query: 341 DLTNTLIIMTSDLKDEQV---------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ E + YE M T RV + S F+P L +D +++
Sbjct: 717 DFRNTVIVMTSNIGSEYILDVSGDDTKYEKMQT----RVTDSLRSHFRPEFLNRVDDIII 772
>gi|238760706|ref|ZP_04621827.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
gi|238701079|gb|EEP93675.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALNKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLA--VDVEEIAE 176
+ + A+RV D Y KI + Q+ A + GK + L V EIAE
Sbjct: 479 LEQAKITLEQARRVGDLTRMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEAEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP S ++ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A L+ D+D+ ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALATFLF---DSDDAMVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVV 762
>gi|402306300|ref|ZP_10825350.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
gi|400375371|gb|EJP28273.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
Length = 858
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 196/416 (47%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 360 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERR 417
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVSFVKL---------RMQ 129
+ + +E + L KE+ D +SR L ++D EL + + EL K ++
Sbjct: 418 IIQLKLERQALQKEE-DEASRQ-RLAKLDEELAAKEREYSELEEVWKAEKSALLGTQHIK 475
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE-----------------KLAVDVE 172
E ++ + A+R ++ K+ + ++ K+ + V E
Sbjct: 476 TELENARIAMDQARRENNFEKMSELQYGKIPALEKQLQEAVKREEEGSENHLLRTKVTDE 535
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 536 EIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---GL 592
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S + +G FLF GP GK EL K +A+ L+D+ D ++ DM + E S+
Sbjct: 593 SDPNKPIGSFLFLGPTGVGKTELCKTLASFLFDDPDA---MVRIDMSEFMEKHSVSRLVG 649
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 650 APPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 707
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E A+Y V V G F+P + +D VV
Sbjct: 708 VDFRNTVVIMTSNLGSHLIQEAP-EASYAEMKALVMSVVGQHFRPEFINRIDDTVV 762
>gi|191638350|ref|YP_001987516.1| Chaperone ClpB [Lactobacillus casei BL23]
gi|385820051|ref|YP_005856438.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei LC2W]
gi|385823252|ref|YP_005859594.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei BD-II]
gi|409997215|ref|YP_006751616.1| chaperone protein ClpB [Lactobacillus casei W56]
gi|190712652|emb|CAQ66658.1| Chaperone ClpB [Lactobacillus casei BL23]
gi|327382378|gb|AEA53854.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei LC2W]
gi|327385579|gb|AEA57053.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei BD-II]
gi|406358227|emb|CCK22497.1| Chaperone protein ClpB [Lactobacillus casei W56]
Length = 868
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
gi|49530427|emb|CAG68139.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
Length = 859
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 125/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ ++++ L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLQMESFLHNRVVGQDEAVIAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ AT V V S F+P + +D+LVV
Sbjct: 705 IDFKNTVIVMTSNLGSQDVRELGEGATDDEVRAVVMSAVSQHFRPEFINRIDELVV 760
>gi|417989608|ref|ZP_12630110.1| ClpB family protein [Lactobacillus casei A2-362]
gi|410537701|gb|EKQ12271.1| ClpB family protein [Lactobacillus casei A2-362]
Length = 868
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|417980642|ref|ZP_12621322.1| ClpB family protein [Lactobacillus casei 12A]
gi|410524965|gb|EKP99872.1| ClpB family protein [Lactobacillus casei 12A]
Length = 868
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 26/259 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQN+A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+ D++ H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLF---DSEKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE-VMLTATYGR-----VNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E + + V T + V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQEDGTVSQQAKDNVRQLVGKAFKPEFLNRIDDI 764
Query: 390 VVIDLAVPLLDTTRLLLRE 408
++ + + L D ++ +++
Sbjct: 765 IMFN-PLSLADVEKIAVKD 782
>gi|424065893|ref|ZP_17803366.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408002911|gb|EKG43137.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|422621047|ref|ZP_16689715.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
M301072]
gi|443641450|ref|ZP_21125300.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
syringae pv. syringae B64]
gi|330901395|gb|EGH32814.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
M301072]
gi|443281467|gb|ELS40472.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
syringae pv. syringae B64]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|440745962|ref|ZP_20925249.1| ATPase AAA [Pseudomonas syringae BRIP39023]
gi|440371783|gb|ELQ08615.1| ATPase AAA [Pseudomonas syringae BRIP39023]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|30250327|ref|NP_842397.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
gi|54035824|sp|Q82SD8.1|CLPB_NITEU RecName: Full=Chaperone protein ClpB
gi|30181122|emb|CAD86314.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
ATCC 19718]
Length = 863
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 130/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++A+ ++ +A+ + +
Sbjct: 536 VGAEEIAEVVSRATGIPVSKMMQGEREKLLFMEDKLHERVIGQDEAVRLVSDAIRR---S 592
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 RSGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRVDMSEFMEKHSVA 649
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 707
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A G V + F+P + +D+
Sbjct: 708 QGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQVIKLAVMGEVK----TYFRPEFINRIDE 763
Query: 389 LVV 391
+VV
Sbjct: 764 VVV 766
>gi|225017694|ref|ZP_03706886.1| hypothetical protein CLOSTMETH_01623 [Clostridium methylpentosum
DSM 5476]
gi|224949487|gb|EEG30696.1| hypothetical protein CLOSTMETH_01623 [Clostridium methylpentosum
DSM 5476]
Length = 867
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 40/275 (14%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIA + + TGIP S E+ + ++ L KRV GQN+A+ + EA+ + +A
Sbjct: 538 VTEEEIARIIERWTGIPVSRLMEGEREKLLHLEDTLHKRVIGQNEAVTKVTEAIMRSRAG 597
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ R +G FLF GP GK ELAKA+A L+ D+++ ++ DM Y E S+
Sbjct: 598 IQ--DPNRPIGSFLFLGPTGVGKTELAKALAECLF---DDEHSIVRIDMTEYMEKYSVSR 652
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 653 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRITDSQ 710
Query: 337 IAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+II+TS+L + E+ +A + VNE+ F+P L LD++
Sbjct: 711 GRTVDFKNTIIILTSNLGSSSLLEGIGADGEITESAKF-EVNELLKRTFRPEFLNRLDEI 769
Query: 390 V------------VIDLAVPLLDTTRLLLREWACE 412
V ++DL + L+ RL ++ +CE
Sbjct: 770 VFYKPLSRQDITAIVDLLIADLN-RRLAPKQLSCE 803
>gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
gi|54035836|sp|Q88Q71.1|CLPB_PSEPK RecName: Full=Chaperone protein ClpB
gi|24982014|gb|AAN66250.1|AE016253_5 ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 564 ELLHQRVIGQSEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 736 RAAVMDAVGAHFRPEFINRIDEVVVFE 762
>gi|393766590|ref|ZP_10355145.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
gi|392727908|gb|EIZ85218.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
Length = 874
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 190/419 (45%), Gaps = 59/419 (14%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E+ H ++IQD AL A+ ++ R L ++ ID++ + R D +ELD
Sbjct: 359 EQHHGVRIQDSALVAAATLSN--RYITDRFLPDKAIDLIDEAGSRLRMQVDSKPEELDSI 416
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSC 138
+ R +E E L KE TD +SR +R ++ EL D E + + R + E D +
Sbjct: 417 DREIVRLKIEAEALKKE-TDSASRDRLVR-LEKELAD-LEERSASITARWKAEKDKLGTA 473
Query: 139 -------------VHDAKRVKDYS--------------KILDQIDARVHGKFKEKL--AV 169
+ A+R Y K L +I+A+ G + AV
Sbjct: 474 AGLKKKLDEARNELAAAQRQGQYQRAGELAYGVIPGLEKQLAEIEAKAEGGRDGMMEEAV 533
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
+A V S+ TG+P E+ + ++ L KRV GQ +A++ + A+ + A+
Sbjct: 534 TPAHVAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRR---AR 590
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GL R +G F+F GP GK EL KA+A L+ D+D L+ DM Y E ++
Sbjct: 591 AGLQDPNRPIGSFMFLGPTGVGKTELTKALAGFLF---DDDTALVRIDMSEYMEKHAVAR 647
Query: 289 FF------------DSLAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+L V++RPY VVLFD+IEKA+ + N+LL++L D R
Sbjct: 648 LIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVL--DDGRLTDGQ 705
Query: 337 IAAFDLTNTLIIMTSDLKDE----QVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NTL+IMTS+L E Q A V V S F+P L +D++++
Sbjct: 706 GRTVDFRNTLLIMTSNLGAEYLVNQPAGEDTEAVREEVMNVVRSHFRPEFLNRVDEIIL 764
>gi|319891952|ref|YP_004148827.1| ClpB protein [Staphylococcus pseudintermedius HKU10-03]
gi|386319786|ref|YP_006015949.1| ATP-dependent chaperone protein ClpB [Staphylococcus
pseudintermedius ED99]
gi|317161648|gb|ADV05191.1| ClpB protein [Staphylococcus pseudintermedius HKU10-03]
gi|323464957|gb|ADX77110.1| ATP-dependent chaperone protein ClpB [Staphylococcus
pseudintermedius ED99]
Length = 873
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI E+ S+ TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGEIVSQWTGIPVSKLVETEREKLLHLSDILHERVVGQDRAVDLVADAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + + G++++ T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQILLENVKDS--GKIDDATEKAVMNSLNAYFKPEILNRMDDIVL 768
>gi|422406178|ref|ZP_16483211.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881337|gb|EGH15486.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 855
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 507 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 564
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 565 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 621
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 622 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 678
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 679 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 736
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 737 RAAVMDAVGTHFRPEFVNRIDEVVIFE 763
>gi|71736209|ref|YP_273034.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257481615|ref|ZP_05635656.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289627152|ref|ZP_06460106.1| clpB protein [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|416014082|ref|ZP_11562002.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|416024302|ref|ZP_11568434.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|422584377|ref|ZP_16659487.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422598531|ref|ZP_16672791.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422679424|ref|ZP_16737698.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|71556762|gb|AAZ35973.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320326251|gb|EFW82305.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320330675|gb|EFW86652.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330869194|gb|EGH03903.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988808|gb|EGH86911.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331008772|gb|EGH88828.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|339326277|ref|YP_004685970.1| chaperone protein ClpB [Cupriavidus necator N-1]
gi|338166434|gb|AEI77489.1| chaperone protein ClpB [Cupriavidus necator N-1]
Length = 862
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ RL RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDRLHARVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A ++ D++ HLI DM + E S+
Sbjct: 593 --GLADENRPYGSFLFLGPTGVGKTELCKALAEFMF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M A G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNLGS-QIIQSMTGEPQEAIKGAVWQEVRTHFRPEFLNRIDEVVV 764
>gi|427735123|ref|YP_007054667.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
gi|427370164|gb|AFY54120.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
Length = 888
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 158/297 (53%), Gaps = 40/297 (13%)
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSKI-------------LDQIDARVHGKFKEKLAVDV 171
KLR+Q+E + ++ A ++K Y K+ L +I ++ +E++ D
Sbjct: 486 KLRVQIEQAERAYDLNTAAQLK-YGKLEGVQRDREIKETKLLEIQSKGVSLLREQVTED- 543
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
+IAE+ +K TGIP + ++ ++++ L +RV GQ++A+ + A+ + +A K
Sbjct: 544 -DIAEIVAKWTGIPVNSLLESERQKLLQLEDHLHQRVIGQDEAVSAVSAAIRRARAGMK- 601
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+R +G FLF GP GK ELA+A+A ++D+ D ++ DM Y E S+
Sbjct: 602 -DPQRPIGSFLFMGPTGVGKTELARALAKFMFDSED---AMVRLDMSEYMEKHSVSRLVG 657
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L+ V++RPYSVVL D++EKA++ + N+LL++L D R
Sbjct: 658 APPGYVGFEEGGQLSEAVRRRPYSVVLLDEVEKAHADVFNILLQVL--DDGRITDSQGRV 715
Query: 340 FDLTNTLIIMTSDLKDEQVYEVML-TATYGRV-NEVTGSL---FKPSLLKLLDKLVV 391
D NT+I+MTS++ E + ++ + Y ++ N V G+L F+P ++ +D L++
Sbjct: 716 VDFRNTVIVMTSNIGSEHILDISGDDSQYEKMRNRVMGALRKHFRPEFVQRIDDLII 772
>gi|269836474|ref|YP_003318702.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
gi|269785737|gb|ACZ37880.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
Length = 870
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 128/242 (52%), Gaps = 30/242 (12%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD ++IAEV SK TGIP S E+ + ++ RL +RV GQ++AI+ + A+ + A
Sbjct: 535 VDADDIAEVVSKWTGIPVSKLVEGEIEKLVHMESRLHQRVVGQDEAIEAVSNAIRR---A 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R LG F+F GP GK ELA+A+A L+ D++ ++ DM Y E ++
Sbjct: 592 RSGLQDPNRPLGSFIFLGPTGVGKTELARALAEFLF---DDERAMVRIDMSEYQERHTVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L +++RPY+VVLFD+IEKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPEVFNVLLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG------RVNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L Y + G RV E + F+P L +D++
Sbjct: 707 QGRTVDFRNTVIIMTSNLGS--AY-IQAAGPQGEAEMRRRVFEALRNHFRPEFLNRIDEI 763
Query: 390 VV 391
V+
Sbjct: 764 VI 765
>gi|291287614|ref|YP_003504430.1| ATP-dependent chaperone ClpB [Denitrovibrio acetiphilus DSM 12809]
gi|290884774|gb|ADD68474.1| ATP-dependent chaperone ClpB [Denitrovibrio acetiphilus DSM 12809]
Length = 867
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 208/429 (48%), Gaps = 78/429 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGE--LRERFIDILLKGIKRCLNSRDKYQKELDKHK 79
H ++I D A+ A+ +A NK + + ++ ID++ + + D ELD+
Sbjct: 362 HGVRITDNAIVAAAHMA----NKYISDRFMPDKAIDLIDEATAKIRMEIDSLPTELDE-- 415
Query: 80 YFLRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFV 136
L R + E Q +K++ D++S+ L +++NEL + E ++ Q E D
Sbjct: 416 --LERRITHLEIDKQALKKEKDNASKQ-RLEKLENELAN-LKEQAQSMRAAWQNEKDVIQ 471
Query: 137 SCVH-------------DAKRVKD--------YSKILDQIDARVHG---KFKE------- 165
+ H A+R+ D YSK++ ++++R+ G K E
Sbjct: 472 NVRHIKEQIEQTKHEMASAERLGDLTKASELKYSKLV-ELESRLQGANSKLSELQKNKRI 530
Query: 166 -KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTK 224
K VD E+IA V SK TGIPA+ + ++ +R++ L KRV GQ++AI V+ E++ +
Sbjct: 531 LKEEVDEEDIATVISKWTGIPATRLLEEEADKLIRMEDYLHKRVVGQDNAIRVVSESVRR 590
Query: 225 PKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTEL 283
+A GL+ + +G F+F GP GK ELAK++A L+D+ D ++ DM Y E
Sbjct: 591 SRA---GLNDPGKPIGSFIFLGPTGVGKTELAKSLAEFLFDSED---AIVRIDMSEYMEK 644
Query: 284 ESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNR 331
S+ + L V++RPYSV+L D+IEKA+S + N+LL++L D R
Sbjct: 645 HSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSVILMDEIEKAHSDVFNVLLQLL--DDGR 702
Query: 332 KATRGIAAFDLTNTLIIMTSDLKDEQVYEVML-----TATYGRVNEVTGS----LFKPSL 382
N +IIMTS++ + +++ Y + ++ S F+P
Sbjct: 703 LTDSKGRTVSFKNCVIIMTSNIASDMIHDAFAEDGDWEQKYSSIQKIAISQLSGYFRPEF 762
Query: 383 LKLLDKLVV 391
L +D +VV
Sbjct: 763 LNRIDDIVV 771
>gi|116333409|ref|YP_794936.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
gi|116098756|gb|ABJ63905.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
Length = 870
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 126/239 (52%), Gaps = 29/239 (12%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIA V S++TGIP + E+ +++ L +RV GQ+ A+ + +A+ + +A +
Sbjct: 537 EIAAVVSRMTGIPVTKLVQGEREKLLKLADHLHERVVGQDQAVSAVADAVLRSRAGLQ-- 594
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ LG FLF GP GK ELAKA+A L+D+ D H++ DM Y E ES+ +
Sbjct: 595 DPTKPLGSFLFLGPTGVGKTELAKALAENLFDSED---HMVRIDMSEYMEKESVSRLVGA 651
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++ PY++VLFD++EKA+ + NLLL++L D R
Sbjct: 652 APGYVGYEEGGQLTEAVRRNPYTIVLFDEVEKAHPDVFNLLLQVL--DDGRLTDSQGRTV 709
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE--------VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L E + + T GR++E + S F+P L +D+ ++
Sbjct: 710 DFKNTILIMTSNLGSELLLQG--TDDQGRISEDAKKQVAQLLQSHFRPEFLNRIDETIM 766
>gi|422631434|ref|ZP_16696620.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
1704B]
gi|330941203|gb|EGH44077.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
1704B]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|298160065|gb|EFI01097.1| ClpB protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|304438821|ref|ZP_07398747.1| chaperone protein ClpB [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372704|gb|EFM26284.1| chaperone protein ClpB [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 861
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 36/311 (11%)
Query: 166 KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
K V EEI EV S+LTGIP ++ +++ RL +RV GQ++A+ + +A+ +
Sbjct: 527 KEVVTEEEIREVVSRLTGIPLERLNETERDKLLKLDERLHERVIGQDEAVKAVSDAVLRA 586
Query: 226 KAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
+A K S R +G F+F GP GK E AKA+ +L+D+ N LI DM Y E S
Sbjct: 587 RAGLK--SENRPIGSFIFLGPTGVGKTETAKALTEDLFDDEKN---LIRIDMSEYMEKYS 641
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ S L V++ PYSV+LFD+IEKA+ + N+LL++L D R
Sbjct: 642 VSRLIGSPPGYVGYEEGGQLTEAVRRHPYSVILFDEIEKAHPDVFNILLQVL--DDGRLT 699
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKL 385
D NT+IIMTS+L + E + G++ E T + F+P L
Sbjct: 700 DNQGRTVDFKNTVIIMTSNLGSADLLEGI--DADGKIPEATKDIVMEELKRSFRPEFLNR 757
Query: 386 LDKLVVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAAR-KY 444
+D++V+ PL + + A +E ++R +++ + + + SAL I + +Y
Sbjct: 758 IDEIVMF---TPLTRDQIFEIIKQAIKELEKR-LEAREITIEATESALQKILDESYNVQY 813
Query: 445 GQNGEGLKRWM 455
G +KR++
Sbjct: 814 G--ARPVKRYI 822
>gi|383787672|ref|YP_005472240.1| chaperone ClpB [Caldisericum exile AZM16c01]
gi|381363308|dbj|BAL80137.1| chaperone ClpB [Caldisericum exile AZM16c01]
Length = 868
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 131/249 (52%), Gaps = 32/249 (12%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EE+A+V SK TGIP S +E+ + ++ LKKRV GQ+ A++ + A+ + +A
Sbjct: 535 VGEEEVAQVVSKWTGIPVSKMLRTEKEKLVNLEETLKKRVVGQDQAVEAVSNAIRRARA- 593
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R +G F+F GP GK ELAKA+A L+ D + LI DM Y E ++
Sbjct: 594 --GLSDPNRPIGSFIFLGPTGVGKTELAKALAEALF---DTEKALIRIDMSEYMEKFAVS 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRQPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDS 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVML---TATY--------GRVNEVTGSLFKPSLLK 384
D NT+IIMTS++ + + E+ TA Y RV E +F+P L
Sbjct: 707 KGRTVDFKNTIIIMTSNIGSKYITEINAIPGTAEYREQYERVVERVYEEMRHIFRPEFLN 766
Query: 385 LLDKLVVID 393
+D++VV +
Sbjct: 767 RIDEIVVFN 775
>gi|281205439|gb|EFA79630.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 880
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 204/426 (47%), Gaps = 67/426 (15%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDIL---LKGIKRCLNSRDKYQKEL 75
E H ++I D +L +A++++ R L ++ ID+L I+ LNS+ + +L
Sbjct: 358 EAHHGVRITDNSLVVAAQLSH--RYITNRFLPDKAIDLLDEACANIRVQLNSQPEAIDQL 415
Query: 76 DKHKYFLRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELK--DAFF--ELVSFVKL 126
++ K L VE L KE+ D S L +I +EL A + E K+
Sbjct: 416 ERRKLQLE---VEKTALEKEEDDQSKHRLEDVKEELAKIQDELTPLQAIYQKERSRVDKI 472
Query: 127 R-MQVEYDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---A 168
R ++ + +D + DA+R + D K ++ + K+ L
Sbjct: 473 RDLRKKLEDVKVKLADAERRYDLQLVADLKYYVIPDLEKQIENCNIERKDAKKDSLVSET 532
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IAEV S+ TGIP + ++R + + L +RV GQ++A+D + +A+ + +A
Sbjct: 533 VTSEQIAEVVSRWTGIPVTKLSQTEKQRTLSLGKHLHERVVGQDEAVDAVADAVLRSRA- 591
Query: 229 KKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ Q LG FLF GP GK ELAKA+A EL+ D++ H+I DM Y E ++
Sbjct: 592 --GLARLNQPLGSFLFLGPTGVGKTELAKALAVELF---DDEKHMIRIDMSEYMEQHAVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYDQGGQLTEAVRRKPYSVVLFDEVEKAHPQVWNVLLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKD-----EQVYEVMLTATYGRV-----NEVTGSLFKPSLLKL 385
D +N +II+TS+L E E+ T V NEV F+P L
Sbjct: 705 QGRTIDFSNVVIILTSNLGSQYLLAESNAEIFNTGLSQHVKDQVINEVRKH-FRPEFLNR 763
Query: 386 LDKLVV 391
LD +VV
Sbjct: 764 LDDIVV 769
>gi|188534765|ref|YP_001908562.1| protein disaggregation chaperone [Erwinia tasmaniensis Et1/99]
gi|188029807|emb|CAO97688.1| Chaperone ClpB [Erwinia tasmaniensis Et1/99]
Length = 859
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIA+V ++ TGIP + ++ +R++ L RV GQ +A++ + A+ + +A GL
Sbjct: 535 EIADVLARWTGIPVARMMEGERDKLLRMEQELHTRVIGQQEAVEAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E +YG + E+ S+ F+P + +D+LVV
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGALSYGEMKELVMSVVSHSFRPEFINRIDELVV 762
>gi|152971442|ref|YP_001336551.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|386036065|ref|YP_005955978.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
gi|419972349|ref|ZP_14487777.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980701|ref|ZP_14495983.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983727|ref|ZP_14498877.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991779|ref|ZP_14506742.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997789|ref|ZP_14512583.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420000915|ref|ZP_14515572.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010860|ref|ZP_14525327.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013477|ref|ZP_14527787.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022400|ref|ZP_14536569.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028218|ref|ZP_14542200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030071|ref|ZP_14543899.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420035798|ref|ZP_14549461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045302|ref|ZP_14558771.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420047908|ref|ZP_14561223.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420052980|ref|ZP_14566159.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061850|ref|ZP_14574832.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068245|ref|ZP_14581027.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071034|ref|ZP_14583683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075822|ref|ZP_14588297.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081380|ref|ZP_14593689.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421912823|ref|ZP_16342531.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421916255|ref|ZP_16345837.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424831907|ref|ZP_18256635.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424932241|ref|ZP_18350613.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425075406|ref|ZP_18478509.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425082745|ref|ZP_18485842.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425086042|ref|ZP_18489135.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425092829|ref|ZP_18495913.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428151942|ref|ZP_18999645.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428936035|ref|ZP_19009472.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
gi|428942574|ref|ZP_19015558.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
gi|449059107|ref|ZP_21736868.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
gi|150956291|gb|ABR78321.1| ATP-dependent protease, Hsp 100 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339763193|gb|AEJ99413.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
gi|397344921|gb|EJJ38049.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350758|gb|EJJ43844.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397355359|gb|EJJ48369.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397362187|gb|EJJ54841.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363043|gb|EJJ55687.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397372440|gb|EJJ64924.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377610|gb|EJJ69837.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397379560|gb|EJJ71751.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397384640|gb|EJJ76753.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392066|gb|EJJ83880.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402530|gb|EJJ94133.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397407815|gb|EJJ99200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409878|gb|EJK01175.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397415852|gb|EJK07031.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397424397|gb|EJK15295.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397426653|gb|EJK17461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429599|gb|EJK20309.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397441120|gb|EJK31508.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397448321|gb|EJK38500.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397453389|gb|EJK43450.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405594595|gb|EKB68005.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405600997|gb|EKB74162.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405605974|gb|EKB78974.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405611171|gb|EKB83939.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407806428|gb|EKF77679.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410113258|emb|CCM85156.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410121488|emb|CCM88462.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414709345|emb|CCN31049.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426298379|gb|EKV60788.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
gi|426299164|gb|EKV61518.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
gi|427538084|emb|CCM95783.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448875203|gb|EMB10228.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 762
>gi|427717416|ref|YP_007065410.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
gi|427349852|gb|AFY32576.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
Length = 889
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 32/240 (13%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAE+ +K TGIP + ++ ++++ L+KRV GQ +A+ + A+ + +A K
Sbjct: 544 DIAEIVAKWTGIPVNRLLESERQKLLQLETLLQKRVVGQEEAVTAVSAAIRRARAGMK-- 601
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK ELA+A+A L+ D+D+ L+ DM Y E S+ +
Sbjct: 602 DPGRPIGSFLFMGPTGVGKTELARALAQFLF---DSDDALVRLDMSEYMEKHSVSRLVGA 658
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L+ +++RPYSVVL D++EKA+ + N+LL++L D R A
Sbjct: 659 PPGYVGYEEGGQLSEAIRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRITDSQGRAV 716
Query: 341 DLTNTLIIMTSDLKDEQV---------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ E + Y++M RV E S F+P L +D +++
Sbjct: 717 DFRNTVIVMTSNIGSEHILDLSNDDSKYDMM----QKRVTEALRSHFRPEFLNRVDDIII 772
>gi|402566351|ref|YP_006615696.1| ClpB protein [Burkholderia cepacia GG4]
gi|402247548|gb|AFQ48002.1| ClpB protein [Burkholderia cepacia GG4]
Length = 865
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 126/240 (52%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++AI + +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQHEAISAVADAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A+ L+ D++ HLI DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCKALASFLF---DSEEHLIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L QV + M + + + F+P L +D +VV
Sbjct: 709 QGRTVDFKNTVIVMTSNL-GSQVIQAMTGSPQEEIKDAVWLEVKQHFRPEFLNRIDDVVV 767
>gi|254413004|ref|ZP_05026776.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196180168|gb|EDX75160.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 875
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 134/254 (52%), Gaps = 26/254 (10%)
Query: 156 DARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAI 215
D + GK + V +IAE+ SK TGIP S +E+ ++++ L +RV GQ +A+
Sbjct: 524 DTQTSGKSLLREEVTESDIAEIISKWTGIPISKLVESEKEKLLQLEDELHQRVVGQEEAV 583
Query: 216 DVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIH 274
+ +A+ + +A GL+ R F+F GP GK ELAKA+A L+D D L+
Sbjct: 584 TAVADAIQRSRA---GLADPNRPTASFIFLGPTGVGKTELAKALAAYLFDTED---ALVR 637
Query: 275 FDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLL 322
DM Y E ++ + L +++RPY+V+LFD+IEKA++ + N++L
Sbjct: 638 IDMSEYMEKHAVSRLIGAPPGYIGYEEGGQLTESIRRRPYAVILFDEIEKAHNDVFNIML 697
Query: 323 KILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY-----GRVNEVTGSL 377
+IL D R D NT+IIMTS++ + + ++ T+ GRV E +
Sbjct: 698 QIL--DDGRVTDAQGHTVDFKNTVIIMTSNIGSQYILDLAGDDTHYDEMRGRVMEAMRTS 755
Query: 378 FKPSLLKLLDKLVV 391
F+P L +D++++
Sbjct: 756 FRPEFLNRIDEVII 769
>gi|206578585|ref|YP_002237070.1| protein disaggregation chaperone [Klebsiella pneumoniae 342]
gi|288934032|ref|YP_003438091.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
gi|290510908|ref|ZP_06550277.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
gi|206567643|gb|ACI09419.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae 342]
gi|288888761|gb|ADC57079.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
gi|289775901|gb|EFD83900.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKESDEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP S ++ +R++ L RV GQ++A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVV 762
>gi|421165326|ref|ZP_15623661.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
700888]
gi|404542185|gb|EKA51515.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
700888]
Length = 850
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ SKLTGIP + + E+ ++
Sbjct: 446 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISKLTGIPVTELTAEEREKLLQ 503
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 504 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 560
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 561 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVIL 617
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L E + +
Sbjct: 618 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGE 675
Query: 367 YGRV-----NEVTGSL---FKPSLLKLLDKLVVID 393
+ + E+ +L F+P L LD+++V +
Sbjct: 676 FAQPPEKLKRELMTTLRGHFRPEFLNRLDEVIVFE 710
>gi|300704290|ref|YP_003745893.1| chaperone [Ralstonia solanacearum CFBP2957]
gi|299071954|emb|CBJ43284.1| Chaperone [Ralstonia solanacearum CFBP2957]
Length = 862
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 132/240 (55%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + ++ +R++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G+S + G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 --GISDENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M+ ++ G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNL-GSQLIQSMVGESFDVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|407792049|ref|ZP_11139122.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
gi|407198214|gb|EKE68253.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 196/420 (46%), Gaps = 68/420 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R A +L ++ ID++ + D +ELD+ +
Sbjct: 361 HSVEITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD--AFFE------------LVSFVKLR 127
+ + +E + L KE D S + L ++ EL D +E L +++
Sbjct: 419 MIQLKLERQALTKETDDASKKRLNL--LEEELADLDGRYEELDEIWNTEKAALSGTQQIK 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVE 172
Q+E + + A+R +Y ++ + Q+D + +E K V
Sbjct: 477 AQLE--EARQELEIARRAANYERMSELQYGRIPELEKQLDLASAAEMQEMTLLKHKVSDG 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S+ TGIP + ++ ++++ L KRV GQ +A+ + A+ + +A GL
Sbjct: 535 EIAEVVSRWTGIPVAKMLEGERDKLLQMEDNLHKRVVGQEEAVTAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S RR +G FLF GP GK EL KA+A L+D +D ++ DM + E ++
Sbjct: 592 SDPRRPIGSFLFLGPTGVGKTELCKALAEFLFDTDDA---MVRLDMSEFMEKHAVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + NLLL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNLLLQVL--DDGRLTDSQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQV--------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ YEVM V G F+P + +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSARIQEHAGKEDYEVMKAMVMDEV----GHHFRPEFINRIDETVV 762
>gi|400287671|ref|ZP_10789703.1| chaperonin clpA/B [Psychrobacter sp. PAMC 21119]
Length = 865
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 26/236 (11%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV + TGIP + E+ + ++ +L +RV GQ++A++ + A+ + +A GL
Sbjct: 539 EIAEVVAAATGIPVNKMMQGEREKMLAMEEKLHERVIGQDEAVEAVANAVRRSRA---GL 595
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL K++AN L+D+ D+ ++ DM Y E S+
Sbjct: 596 SDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSEDS---IVRIDMSEYMEKHSVSRLVG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 653 APPGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L ++ E M+ +Y V + G F+P + +D++VV
Sbjct: 711 VDFKNTVIIMTSNLGSHKIQE-MVGESYEDIKAEVMDSVGQHFRPEFVNRIDEIVV 765
>gi|398883912|ref|ZP_10638859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
gi|398195738|gb|EJM82767.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S ++ M+++
Sbjct: 506 IPDLERSLQMVDQ--HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
G L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 GLLHQRVIGQDEAVIAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFKNTVIVMTSNLGSVQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + + F+P + +D++V+ +
Sbjct: 736 RAAVMDAISTHFRPEFINRVDEVVIFE 762
>gi|398876531|ref|ZP_10631686.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
gi|398204297|gb|EJM91101.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S ++ M+++
Sbjct: 506 IPDLERSLQMVDQ--HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLMKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
G L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 GLLHQRVIGQDEAVIAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFKNTVIVMTSNLGSVQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + + F+P + +D++V+ +
Sbjct: 736 RAAVMDAISTHFRPEFINRVDEVVIFE 762
>gi|383188698|ref|YP_005198826.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371586956|gb|AEX50686.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF-----------ELVSFVKLR-MQ 129
+ + +E + L KE D S + L ++ EL E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASVKR--LEMLETELNQKEREYSELEEEWKAEKASLTGTQNIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---QIDA--RVHGKFKEKL---AVDVEE 173
E + + A+RV D Y KI + Q+ A + GK + L DVE
Sbjct: 477 AELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAEGKTMKLLRNRVTDVE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GLS
Sbjct: 536 IADVLARWTGIPVARMLESEREKLLRMEEELHNRVIGQNEAVEAVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G FLF GP GK EL KA+A L++++D ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFLFLGPTGVGKTELCKALATFLFNSDDA---MVRIDMSEFMEKHSVSRLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + + A+Y + V EV F+P + +D++VV
Sbjct: 708 DFRNTVVIMTSNLGSDIIQQHFGEASYAQMKESVMEVVTHSFRPEFINRIDEVVV 762
>gi|289651391|ref|ZP_06482734.1| clpB protein [Pseudomonas syringae pv. aesculi str. 2250]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEKGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|168186858|ref|ZP_02621493.1| ATP-dependent chaperone ClpB [Clostridium botulinum C str. Eklund]
gi|169295215|gb|EDS77348.1| ATP-dependent chaperone ClpB [Clostridium botulinum C str. Eklund]
Length = 866
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 123/245 (50%), Gaps = 40/245 (16%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
+EI+E+ SK TGIP + +E+ +R++ L+KRV GQ++A + A+ + +A K
Sbjct: 541 DEISEIVSKWTGIPVTRLVEGEKEKLLRLEDELRKRVIGQDEATVAVSNAVIRARAGLK- 599
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
RR +G F+F GP GK ELAK +A L+D+ DN +I DM Y E ++
Sbjct: 600 -DERRPIGSFIFLGPTGVGKTELAKTLARNLFDSEDN---IIRIDMSEYMEKHAVSRLVG 655
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
L V++ PYSV+LFD+IEKAN + N+ L+IL D R
Sbjct: 656 PPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQIL--DDGRLTDNKGKT 713
Query: 340 FDLTNTLIIMTSDLK-------------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLL 386
D NT+IIMTS+L DE+V E ++ R FKP L +
Sbjct: 714 VDFKNTIIIMTSNLGSSYLLENKGKDEVDEKVREEVMETLKMR--------FKPEFLNRI 765
Query: 387 DKLVV 391
D +++
Sbjct: 766 DDIIM 770
>gi|386010294|ref|YP_005928571.1| chaperone ClpB [Pseudomonas putida BIRD-1]
gi|313497000|gb|ADR58366.1| ClpB [Pseudomonas putida BIRD-1]
Length = 831
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 483 IPDLERSLQMVDQ--HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 540
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G FLF GP GK EL KA+A
Sbjct: 541 ELLHQRVIGQSEAVTAVANAVRRSRA---GLSDPNRPSGSFLFLGPTGVGKTELCKALAE 597
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 598 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 654
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 655 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 712
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 713 RAAVMDAVGAHFRPEFINRIDEVVVFE 739
>gi|153824206|ref|ZP_01976873.1| clpB protein, partial [Vibrio cholerae B33]
gi|126518271|gb|EAZ75496.1| clpB protein [Vibrio cholerae B33]
Length = 444
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 122 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 178
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 179 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 235
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 236 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 293
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 294 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 349
>gi|15595656|ref|NP_249150.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa PAO1]
gi|9946319|gb|AAG03848.1|AE004483_6 probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO1]
Length = 850
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ SKLTGIP + + E+ ++
Sbjct: 446 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISKLTGIPVTELTAEEREKLLQ 503
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 504 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 560
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 561 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVIL 617
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L E + +
Sbjct: 618 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGE 675
Query: 367 YGRV-----NEVTGSL---FKPSLLKLLDKLVVID 393
+ + E+ +L F+P L LD+++V +
Sbjct: 676 FAQPPEKLKRELMTTLRGHFRPEFLNRLDEVIVFE 710
>gi|418584972|ref|ZP_13149029.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591722|ref|ZP_13155613.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|421515076|ref|ZP_15961762.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO579]
gi|375045304|gb|EHS37890.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049448|gb|EHS41944.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|404348804|gb|EJZ75141.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO579]
Length = 932
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ SKLTGIP + + E+ ++
Sbjct: 528 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISKLTGIPVTELTAEEREKLLQ 585
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 586 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 642
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 643 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVIL 699
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L E + +
Sbjct: 700 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGE 757
Query: 367 YGRV-----NEVTGSL---FKPSLLKLLDKLVVID 393
+ + E+ +L F+P L LD+++V +
Sbjct: 758 FAQPPEKLKRELMTTLRGHFRPEFLNRLDEVIVFE 792
>gi|339000201|ref|ZP_08638818.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
TD01]
gi|338762897|gb|EGP17912.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
TD01]
Length = 859
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 134/246 (54%), Gaps = 36/246 (14%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ +R++ L +RV GQ++A++ + A+ + +A
Sbjct: 533 VTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHERVIGQHEAVEAVANAVRRSRA- 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K++AN L+ D + ++ DM + E S+
Sbjct: 592 --GLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLF---DTEEAMVRIDMSEFMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L+ + + T
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLE---DGRLTD 703
Query: 336 GIA-AFDLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKL 385
G D NT+I+MTS++ D+ YEVM A V EV G+ F+P L+
Sbjct: 704 GQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDNDYEVMKNA----VMEVVGNHFRPELINR 759
Query: 386 LDKLVV 391
+D++VV
Sbjct: 760 IDEVVV 765
>gi|113868225|ref|YP_726714.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
gi|113527001|emb|CAJ93346.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
Length = 862
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ ++++ RL RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGEREKLLKMEDRLHGRVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL KA+A ++ D++ HLI DM + E S+
Sbjct: 593 --GLADENRPYGSFLFLGPTGVGKTELCKALAEFMF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M A G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNL-GSQIIQSMTGEPQEAIKGAVWQEVRTHFRPEFLNRIDEVVV 764
>gi|421856930|ref|ZP_16289288.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187677|dbj|GAB75489.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 859
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 201/416 (48%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVKILDSAIIAAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKD---AFFELVSFVKLRMQ 129
L + ++ E VK+D D S+S + +QI+ N+L++ A LV K + Q
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKSEVNYLEKQIEEVQKEYNDLEEVWKAEKTLVEGTK-KAQ 473
Query: 130 VEYDDFVSCVHDAKRVKDYS--------------KILDQIDARVHGKFKEKL---AVDVE 172
VE D + A+R D++ K L+Q D + + KL V
Sbjct: 474 VELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLEQ-DEVIEDHEEPKLLRNKVTDN 532
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHNRVVGQDEAVVAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+LFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ A+ + V + F+P + +D+LV+
Sbjct: 705 IDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMNAVSHHFRPEFINRIDELVI 760
>gi|422649153|ref|ZP_16712263.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330962677|gb|EGH62937.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 854
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S ++ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L KRV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHKRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|254449004|ref|ZP_05062458.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
gi|198261398|gb|EDY85689.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
Length = 854
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 194/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + + D A+ A+ ++Q R +L ++ ID++ + R D + +DK +
Sbjct: 359 HGVDVTDPAIVSAATLSQ--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDKLERR 416
Query: 82 LRRAVVEYEQLVKEDTDHSSRSF-----WLRQIDNE---LKDAFFELVSFVKLRMQVE-- 131
L + +E E L KE + S + +R ++ E L + + S V+ V+
Sbjct: 417 LIQLKIEREALKKESDEASKKRLNDLETQIRSLEKEYADLDEVWRSEKSAVQGNTNVKEA 476
Query: 132 YDDFVSCVHDAKRVKDYSKI--------------LDQIDARVHGKFKE-KLAVDVEEIAE 176
D + A+R D S++ LDQ ++ +F + V EEIAE
Sbjct: 477 LDRARVELETARRAGDLSRMSELQYGTIPELEQQLDQAESDDEREFTLLRNKVTEEEIAE 536
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V SK TGIP S ++ +R++ L +RV GQ++A+ + +A+ + +A GLS
Sbjct: 537 VVSKWTGIPVSKMLEGERDKLLRMEAALHQRVVGQDEAVRAVSDAVRRSRA---GLSDPN 593
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK EL KA+A L+D D ++ DM + E S+ +
Sbjct: 594 RPNGSFLFLGPTGVGKTELTKALAAFLFDTED---AMVRIDMSEFMEKHSVARLVGAPPG 650
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V+++PYSVVL D++EKA+ + N+LL++L D R D
Sbjct: 651 YVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 708
Query: 344 NTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+++MTS+L ++ + +TY V E G F+P + +D+ VV
Sbjct: 709 NTVVVMTSNLGSSEIQMLGDVSTYDDMKAAVMEEVGKHFRPEFINRIDEAVV 760
>gi|420222209|ref|ZP_14727131.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH08001]
gi|420225135|ref|ZP_14729970.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH06004]
gi|394289445|gb|EJE33326.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH08001]
gi|394293879|gb|EJE37576.1| ATP-dependent chaperone protein ClpB [Staphylococcus epidermidis
NIH06004]
Length = 869
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYS++L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSIILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A T V + + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|376255149|ref|YP_005143608.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae PW8]
gi|372118233|gb|AEX70703.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae PW8]
Length = 849
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 194/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+RR +E L KE TD +S R LRQ + ++ ELV+ K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVREAKE 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---------------VDVEEIA 175
E + S A+R DY K+ + R+ + ++++A V + IA
Sbjct: 480 ELERLRSESEIAERDGDYGKVAELRYGRIP-ELEKQVAEAEEHTVETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
EV S TGIPA E+ + ++ L KRV GQ++A+ + +A+ + +A
Sbjct: 539 EVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++ D+D ++ D+ Y E ++ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMF---DDDRAMVRIDVSEYGEKHAVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L + M+ A FKP + LD +V+ D
Sbjct: 712 NTVLILTSNLGAGGTKDEMMDAVK--------RAFKPEFVNRLDDVVIFD 753
>gi|418070581|ref|ZP_12707856.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus R0011]
gi|423078097|ref|ZP_17066784.1| ATP-dependent chaperone protein ClpB [Lactobacillus rhamnosus ATCC
21052]
gi|357540001|gb|EHJ24018.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus R0011]
gi|357552477|gb|EHJ34250.1| ATP-dependent chaperone protein ClpB [Lactobacillus rhamnosus ATCC
21052]
Length = 868
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 25/242 (10%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA V S+ TGIP + ++ + + L +RV GQ++A+ + +A+ + +A
Sbjct: 532 SVTANEIAAVISRETGIPVAKLVEGDRQKLLHLADNLHQRVIGQDEAVTAVSDAVLRSRA 591
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ S R LG FLF GP GK ELAKA+A +L+D+ + H++ DM Y E S+
Sbjct: 592 GLQDPS--RPLGSFLFLGPTGVGKTELAKALAEDLFDS---EKHMVRIDMSEYMEKASVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKAN + N+LL++L D R
Sbjct: 647 RLVGAAPGYVGYEQGGQLTEAVRRNPYTIVLLDEIEKANPDVFNILLQVL--DDGRLTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDE------QVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L E Q E + +V ++ G FKP L +D +
Sbjct: 705 QGRTVDFKNTIIIMTSNLGSEYLLDGVQKDETVSQQAKDQVRQLIGKAFKPEFLNRIDDI 764
Query: 390 VV 391
++
Sbjct: 765 IM 766
>gi|194366917|ref|YP_002029527.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
gi|194349721|gb|ACF52844.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
Length = 861
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 414
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 415 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDGLEREFSDLNEIWKSEKAALQGTT 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 474 KIKEQVEQAKL--ELESAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 532 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 590 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 704 GRTVDFRNTVIVMTSNLGSHQIQDMSSDDSPEAYTQMKAAVMG----VVQAHFRPEFINR 759
Query: 386 LDKLVV 391
LD +VV
Sbjct: 760 LDDIVV 765
>gi|359414757|ref|ZP_09207222.1| ATP-dependent chaperone ClpB [Clostridium sp. DL-VIII]
gi|357173641|gb|EHJ01816.1| ATP-dependent chaperone ClpB [Clostridium sp. DL-VIII]
Length = 869
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 197/414 (47%), Gaps = 53/414 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R + ++ ID++ + + D ELD +
Sbjct: 364 HGIRIHDSAIVAAAKLSD--RYIQDRYMPDKAIDLIDEAGAMIRSEIDSLPTELDVIRRK 421
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-LRQIDNELKDAFFELVS-FVKLRMQV--------E 131
+ + +E E LVKE + S + L + ELK+ E+ + + K + Q+ +
Sbjct: 422 IFKLEIEKEALVKEKDEGSQKRLEDLEKELAELKEKNDEMTAKYTKEKEQITAIKTLKSQ 481
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHG-----KFKE------------KLAVDVEEI 174
DD + A+R DY+K+ + +++ K KE K V +E+
Sbjct: 482 LDDARGEIEAAQRNFDYNKVAEIQYSKIPALEEQIKQKEIELRDNYEGALLKEEVTEQEV 541
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
+ V SK TGIP S E+ +R++ + KRV GQ +A++ + A+ + +A K ++
Sbjct: 542 SAVLSKWTGIPVSNLLEGEREKLLRLEEEMNKRVIGQGEAVEAVTNAILRARAGLKDIN- 600
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G F+F GP GK ELAK +A L+D+ ++ +I DM Y E S+ +
Sbjct: 601 -RPIGSFIFLGPTGVGKTELAKTLARNLFDSEES---IIRIDMSEYMEKHSVSRLVGAPP 656
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 657 GYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQIL--DDGRLTDNKGKTVDF 714
Query: 343 TNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS++ E + E + +V V S FKP L +D ++
Sbjct: 715 KNTIIIMTSNIGSEYLLENKNENHVEEEIKTKVMSVLKSRFKPEFLNRVDDTIM 768
>gi|418354585|ref|ZP_12957307.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
gi|421328011|ref|ZP_15778526.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
gi|423159453|ref|ZP_17146425.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
gi|424655872|ref|ZP_18093174.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
gi|443534469|ref|ZP_21100381.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
gi|356450009|gb|EHI02745.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
gi|356453839|gb|EHI06499.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
gi|395930596|gb|EJH41343.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
gi|408056911|gb|EKG91782.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
gi|443462473|gb|ELT33512.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
Length = 823
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 501 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 557
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 558 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMVRVDMSEFMEKHSVARLVG 614
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 615 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 672
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 673 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 728
>gi|406037410|ref|ZP_11044774.1| clpB [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 859
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R +L ++ ID++ + R D + LDK
Sbjct: 358 HGVQILDSAIIGAAKMSH--RYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRR 415
Query: 82 LRRAVVEYEQLVKEDTDHSSRS---FWLRQID------NELKDAFFELVSFVK--LRMQV 130
L + ++ E VK+D D S++ +QI N+L++ + + V+ + Q+
Sbjct: 416 LIQLKMQLEA-VKKDEDAGSKAEVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQI 474
Query: 131 EYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-HGKFKE--------KLAVDVEEI 174
E D + AKR D ++ ++ ++ R+ + E + V EI
Sbjct: 475 ELDQARVALEKAKREGDLAEAARLQYGVIPELQKRLEQAEVAEENEEPKLIRTKVTENEI 534
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV S TGIP + E+ ++++ L KRV GQ++A+ + A+ + +A GLS
Sbjct: 535 AEVVSAATGIPVTKMLQGEREKLLQMEEFLHKRVVGQDEAVVAVSNAVRRSRA---GLSD 591
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+AN L+D++D +I DM + E S+ +
Sbjct: 592 PNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVGAP 648
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N+LL++L D R D
Sbjct: 649 PGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRVVD 706
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L + V E+ AT + V F+P + +D++V+
Sbjct: 707 FKNTVIVMTSNLGSQDVRELGEGATDDEIRAVVMNAVSQHFRPEFINRIDEVVI 760
>gi|120602336|ref|YP_966736.1| ATP-dependent Clp protease ATPase ClpB [Desulfovibrio vulgaris DP4]
gi|120562565|gb|ABM28309.1| ATPase AAA-2 domain protein [Desulfovibrio vulgaris DP4]
Length = 865
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 196/422 (46%), Gaps = 58/422 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A ++ R +L ++ ID++ + D +LD+
Sbjct: 366 HGVRISDSAIVEAVTLSH--RYITDRQLPDKAIDLIDEAAALIRTEIDSLPADLDEANRK 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL--RMQVEYDDFVSCV 139
+ + +E E L +E TD +SR L +++NEL D E + + R + D S
Sbjct: 424 IMQLEIEREALRRE-TDVASRE-RLERLENELADLRAEQTALLSQWEREKGSIDHVRSIK 481
Query: 140 HDAKRVK------------------DYSKILD---QIDARVHGKFKE----KLAVDVEEI 174
D +R + YS++L+ Q+++ G E K V ++I
Sbjct: 482 EDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLLKEEVRPDDI 541
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AE+ ++ TGIP + E+ +R+ L +RV GQ +A+D + EA+ + A+ GLS
Sbjct: 542 AEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLR---ARAGLSD 598
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK EL K +A L+D +N ++ DM Y E ++ +
Sbjct: 599 PSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEEN---IVRLDMSEYMEKHAVARLIGAP 655
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N LL+IL D R D
Sbjct: 656 PGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQIL--DDGRLTDSHGRTVD 713
Query: 342 LTNTLIIMTSDLKDEQVYEVM------LTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLA 395
NT+IIMTS++ + + + L+ +V E F+P L +D+ V+
Sbjct: 714 FRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKPL 773
Query: 396 VP 397
+P
Sbjct: 774 LP 775
>gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|387153291|ref|YP_005702227.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
gi|54035770|sp|Q72AW6.1|CLPB_DESVH RecName: Full=Chaperone protein ClpB
gi|46449700|gb|AAS96350.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233735|gb|ADP86589.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
Length = 865
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 196/422 (46%), Gaps = 58/422 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A ++ R +L ++ ID++ + D +LD+
Sbjct: 366 HGVRISDSAIVEAVTLSH--RYITDRQLPDKAIDLIDEAAALIRTEIDSLPADLDEANRK 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL--RMQVEYDDFVSCV 139
+ + +E E L +E TD +SR L +++NEL D E + + R + D S
Sbjct: 424 IMQLEIEREALRRE-TDVASRE-RLERLENELADLRAEQTALLSQWEREKGSIDHVRSIK 481
Query: 140 HDAKRVK------------------DYSKILD---QIDARVHGKFKE----KLAVDVEEI 174
D +R + YS++L+ Q+++ G E K V ++I
Sbjct: 482 EDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLLKEEVRPDDI 541
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AE+ ++ TGIP + E+ +R+ L +RV GQ +A+D + EA+ + A+ GLS
Sbjct: 542 AEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLR---ARAGLSD 598
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK EL K +A L+D +N ++ DM Y E ++ +
Sbjct: 599 PSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEEN---IVRLDMSEYMEKHAVARLIGAP 655
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSVVLFD++EKA+ + N LL+IL D R D
Sbjct: 656 PGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQIL--DDGRLTDSHGRTVD 713
Query: 342 LTNTLIIMTSDLKDEQVYEVM------LTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLA 395
NT+IIMTS++ + + + L+ +V E F+P L +D+ V+
Sbjct: 714 FRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKPL 773
Query: 396 VP 397
+P
Sbjct: 774 LP 775
>gi|381150512|ref|ZP_09862381.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
gi|380882484|gb|EIC28361.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
Length = 858
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 25/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV SK TGIP S ++ +R++ + KRV GQ +A+ + A+ + +A
Sbjct: 531 VTEEEIAEVVSKWTGIPVSKMMEGERDKLLRMEEAISKRVVGQEEALKAVSNAIRRSRA- 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL KA+A L+D D L+ DM + E S+
Sbjct: 590 --GLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDTAD---ALVRIDMSEFMEKHSVA 644
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 645 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHPDVFNVLLQVL--DDGRLTDG 702
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+++MTS+L ++ E+ A Y V E+ G F+P + +D++VV
Sbjct: 703 QGRTVDFRNTVVVMTSNLGSSRIQELAGEANYQEMKNEVMEIVGMHFRPEFINRIDEVVV 762
>gi|300859293|ref|YP_003784276.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|375289484|ref|YP_005124025.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 3/99-5]
gi|383315050|ref|YP_005375905.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis P54B96]
gi|384505463|ref|YP_005682133.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 1002]
gi|384509652|ref|YP_005686320.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis I19]
gi|385808355|ref|YP_005844752.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 267]
gi|300686747|gb|ADK29669.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302331542|gb|ADL21736.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 1002]
gi|308277232|gb|ADO27131.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis I19]
gi|371576773|gb|AEX40376.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 3/99-5]
gi|380870551|gb|AFF23025.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis P54B96]
gi|383805748|gb|AFH52827.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 267]
Length = 849
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 193/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
+V S TGIPA E+ +R++ L RV GQ +A++ + +A+ + +A
Sbjct: 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD + + D
Sbjct: 712 NTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVAIFD 753
>gi|218889199|ref|YP_002438063.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa LESB58]
gi|218769422|emb|CAW25182.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa LESB58]
Length = 850
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ SKLTGIP + + E+ ++
Sbjct: 446 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISKLTGIPVTELTAEEREKLLQ 503
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 504 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 560
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 561 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVIL 617
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L E + +
Sbjct: 618 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGE 675
Query: 367 YGRV-----NEVTGSL---FKPSLLKLLDKLVVID 393
+ + E+ +L F+P L LD+++V +
Sbjct: 676 FAQPPEKLKRELMTTLRGHFRPEFLNRLDEVIVFE 710
>gi|359396324|ref|ZP_09189376.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
gi|357970589|gb|EHJ93036.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
Length = 860
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 36/246 (14%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ +R++ L +RV GQN+A++ + A+ + +A
Sbjct: 533 VTEEEIAEVVSRWTGIPVSKMLEGERDKLLRMEEALHERVIGQNEAVEAVANAVRRSRA- 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS R G FLF GP GK EL K++AN L+ D + ++ DM + E S+
Sbjct: 592 --GLSDPNRPNGSFLFLGPTGVGKTELCKSLANFLF---DTEEAMVRIDMSEFMEKHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L+ + + T
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLE---DGRLTD 703
Query: 336 GIA-AFDLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKL 385
G D NT+I+MTS++ D+ YE M RV EV G+ F+P L+
Sbjct: 704 GQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDSDYEEM----KNRVMEVVGNHFRPELINR 759
Query: 386 LDKLVV 391
+D++VV
Sbjct: 760 IDEVVV 765
>gi|313111914|ref|ZP_07797704.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 39016]
gi|355646788|ref|ZP_09054623.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
gi|386068630|ref|YP_005983934.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|310884206|gb|EFQ42800.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 39016]
gi|348037189|dbj|BAK92549.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|354828327|gb|EHF12450.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
Length = 932
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ SKLTGIP + + E+ ++
Sbjct: 528 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISKLTGIPVTELTAEEREKLLQ 585
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 586 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 642
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 643 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVIL 699
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L E + +
Sbjct: 700 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGE 757
Query: 367 YGRV-----NEVTGSL---FKPSLLKLLDKLVVID 393
+ + E+ +L F+P L LD+++V +
Sbjct: 758 FAQPPEKLKRELMTTLRGHFRPEFLNRLDEVIVFE 792
>gi|384507557|ref|YP_005684226.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis C231]
gi|384511737|ref|YP_005691315.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis PAT10]
gi|387137383|ref|YP_005693363.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206981|gb|ADL11323.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis C231]
gi|341825676|gb|AEK93197.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis PAT10]
gi|348607828|gb|AEP71101.1| ATP-dependent chaperone protein ClpB [Corynebacterium
pseudotuberculosis 42/02-A]
Length = 849
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 193/410 (47%), Gaps = 57/410 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFEL-----------VSFVKLR-MQ 129
+RR +E L KE TD +S+ L ++ EL D +L + K+R +
Sbjct: 421 VRRLEIEEVALSKE-TDAASQQ-RLEKLRQELADEREKLGELKARWNNEKSAIDKVREAK 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QI-DARVHGKFKEKLAVDV--EEIA 175
E + S A+R DY K+ + Q+ +A H L+ +V + IA
Sbjct: 479 EELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSR 235
+V S TGIPA E+ +R++ L RV GQ +A++ + +A+ + +A
Sbjct: 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVA--DPN 596
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK ELAKA+A ++D+ + ++ DM Y E S+ +
Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDD---ERAMVRIDMSEYGEKHSVARLVGAPPG 653
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPY+VVLFD++EKA+S + ++LL++L D R D
Sbjct: 654 YVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGRTVDFR 711
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++I+TS+L E M+ A FKP + LD + + D
Sbjct: 712 NTVLILTSNLGAGGTREQMMDAVK--------RAFKPEFVNRLDDVAIFD 753
>gi|421323615|ref|ZP_15774143.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
gi|424594310|ref|ZP_18033648.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
gi|395922830|gb|EJH33645.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
gi|408036905|gb|EKG73321.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|386742535|ref|YP_006215714.1| protein disaggregation chaperone [Providencia stuartii MRSN 2154]
gi|384479228|gb|AFH93023.1| protein disaggregation chaperone [Providencia stuartii MRSN 2154]
Length = 616
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S E+ +R++ +L +RV GQ++A+ + A+ + +A GL
Sbjct: 294 EIAEILARWTGIPVSRMLESEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRA---GL 350
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G F+F GP GK EL KA+AN ++D++D ++ DM + E ++
Sbjct: 351 SDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHAVSRLVG 407
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 408 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 465
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E T Y V EV F+P + +D++VV
Sbjct: 466 VDFRNTVIIMTSNLGSDLIQERFGTIGYSEMKDMVMEVVSHSFRPEFINRIDEVVV 521
>gi|145629931|ref|ZP_01785713.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
R3021]
gi|229844737|ref|ZP_04464876.1| ClpB [Haemophilus influenzae 6P18H1]
gi|144984212|gb|EDJ91635.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
R3021]
gi|229812451|gb|EEP48141.1| ClpB [Haemophilus influenzae 6P18H1]
Length = 856
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 37/271 (13%)
Query: 144 RVKDYSKILDQIDARVHGKFKEKLAVDV--EEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
R+ D K L+Q + GK L V EEIAEV SK TGIP S +E+ +R++
Sbjct: 505 RIPDLEKQLEQAETS-EGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L KRV GQ +A+D + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 564 DELHKRVIGQEEAVDAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLAK 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D+ D ++ DM + E S+ + L V++RPYSV+L D
Sbjct: 621 FLFDSED---AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDL--------KDEQVYE 360
++EKA++ + N+LL++L D R D NT++IMTS+L KDE E
Sbjct: 678 EVEKAHADVFNILLQVL--DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSE 735
Query: 361 VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ V V F+P + +D+ VV
Sbjct: 736 M-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|170723706|ref|YP_001751394.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
gi|169761709|gb|ACA75025.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
Length = 854
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP + E+ ++++
Sbjct: 506 IPDLERSLQMVDQ--HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 DLLHQRVIGQHEAVTAVANAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSVVL D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E+ A
Sbjct: 678 EVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELAGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++VV +
Sbjct: 736 RAAVMDAVGAHFRPEFVNRIDEVVVFE 762
>gi|339477952|ref|YP_004706772.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
PCIT]
gi|338172503|gb|AEI74904.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
PCIT]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 194/415 (46%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+ +
Sbjct: 361 HHVQITDPAIVAAANLSH--RYIADRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL------------RQIDNELKDAFFELVSFVKLRMQ 129
+ + +E + L KE D S + + +++ E K L L+ +
Sbjct: 419 IIQLKLEQQALKKEMDDASVKRLTMLNNELTKKERDYSELEEEWKAEKASLSGTQNLKAE 478
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFK-----EKLAVDVEE 173
+E + A+RV D +++ + Q++A + K D+E
Sbjct: 479 LEQTKI--SIEQARRVGDLARMSELQYGKLPELEKQLEAASQAESKGLRLLRNRVTDIE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV ++ TGIP S + +R++ L+K V GQ++A+ + A+ + +A GL+
Sbjct: 536 IAEVLARWTGIPVSRMLESERAKLVRMEQHLQKIVIGQHEAVAAVSNAIRRSRA---GLA 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G F+F GP GK EL KA+A L+D+ D ++ DM + E S+ +
Sbjct: 593 DPNRPIGSFMFLGPTGVGKTELCKALATFLFDSED---AMVRIDMSEFMEKHSVSRLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L LV++RPYSV+L D+IEKA+S + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTELVRRRPYSVMLLDEIEKAHSDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L E + E Y + EV F+P + +D++VV
Sbjct: 708 DFRNTVIIMTSNLGSEIIQERFDQINYLEIKDVVLEVVSHNFRPEFINRVDEVVV 762
>gi|262191803|ref|ZP_06049974.1| ClpB protein [Vibrio cholerae CT 5369-93]
gi|262032290|gb|EEY50857.1| ClpB protein [Vibrio cholerae CT 5369-93]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|153801889|ref|ZP_01956475.1| clpB protein [Vibrio cholerae MZO-3]
gi|229519981|ref|ZP_04409411.1| ClpB protein [Vibrio cholerae TM 11079-80]
gi|421353515|ref|ZP_15803848.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
gi|124122600|gb|EAY41343.1| clpB protein [Vibrio cholerae MZO-3]
gi|229343033|gb|EEO08021.1| ClpB protein [Vibrio cholerae TM 11079-80]
gi|395954862|gb|EJH65471.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|121605125|ref|YP_982454.1| ATPase [Polaromonas naphthalenivorans CJ2]
gi|120594094|gb|ABM37533.1| ATPase AAA-2 domain protein [Polaromonas naphthalenivorans CJ2]
Length = 867
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + +++ ++++G+L +RV GQ++AI + A+ + +
Sbjct: 534 VGAEEIAEVVSRATGIPVAKMMQGEKDKLLQMEGKLHERVVGQDEAIGAVANAIRR---S 590
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R G FLF GP GK EL KA+A L+D+ D HL+ DM + E S+
Sbjct: 591 RSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSED---HLVRIDMSEFMEKHSVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+I+MTS++ + + M+ Y + + VT L F+P L +D+ VV
Sbjct: 706 QGRTVDFKNTVIVMTSNI-GSPIIQSMVGQPYEEIKDAVTDELKNYFRPEFLNRIDETVV 764
>gi|15640730|ref|NP_230360.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587768|ref|ZP_01677528.1| clpB protein [Vibrio cholerae 2740-80]
gi|227080891|ref|YP_002809442.1| clpB protein [Vibrio cholerae M66-2]
gi|229505671|ref|ZP_04395181.1| ClpB protein [Vibrio cholerae BX 330286]
gi|229508756|ref|ZP_04398249.1| ClpB protein [Vibrio cholerae B33]
gi|229519494|ref|ZP_04408937.1| ClpB protein [Vibrio cholerae RC9]
gi|229608689|ref|YP_002879337.1| ClpB protein [Vibrio cholerae MJ-1236]
gi|254851041|ref|ZP_05240391.1| chaperone protein clpB [Vibrio cholerae MO10]
gi|255743832|ref|ZP_05417788.1| ClpB protein [Vibrio cholera CIRS 101]
gi|262156051|ref|ZP_06029170.1| ClpB protein [Vibrio cholerae INDRE 91/1]
gi|360034620|ref|YP_004936383.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740566|ref|YP_005332535.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
gi|417812757|ref|ZP_12459416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
gi|417815624|ref|ZP_12462257.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
gi|418331759|ref|ZP_12942700.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
gi|418336179|ref|ZP_12945080.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
gi|418343016|ref|ZP_12949811.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
gi|418348183|ref|ZP_12952918.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
gi|419825177|ref|ZP_14348683.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
gi|421315766|ref|ZP_15766338.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
gi|421319565|ref|ZP_15770124.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
gi|421330936|ref|ZP_15781418.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
gi|421334605|ref|ZP_15785073.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
gi|421338497|ref|ZP_15788933.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
gi|421345598|ref|ZP_15795984.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
gi|422890818|ref|ZP_16933229.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
gi|422901693|ref|ZP_16937056.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
gi|422905918|ref|ZP_16940763.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
gi|422912513|ref|ZP_16947039.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
gi|422924996|ref|ZP_16958026.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
gi|423144316|ref|ZP_17131930.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
gi|423148968|ref|ZP_17136327.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
gi|423152813|ref|ZP_17140011.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
gi|423155618|ref|ZP_17142731.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
gi|423164139|ref|ZP_17150926.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
gi|423730272|ref|ZP_17703590.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
gi|423748838|ref|ZP_17711602.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
gi|423891990|ref|ZP_17725677.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
gi|423926765|ref|ZP_17730293.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
gi|424001320|ref|ZP_17744409.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
gi|424005476|ref|ZP_17748460.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
gi|424023486|ref|ZP_17763150.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
HC-62B1]
gi|424026290|ref|ZP_17765906.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
gi|424585615|ref|ZP_18025209.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
gi|424598175|ref|ZP_18037373.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
gi|424600929|ref|ZP_18040086.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
gi|424605908|ref|ZP_18044873.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
gi|424609742|ref|ZP_18048600.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
gi|424612543|ref|ZP_18051350.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
gi|424616366|ref|ZP_18055057.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
gi|424621302|ref|ZP_18059830.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
gi|424644280|ref|ZP_18082034.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
gi|424651923|ref|ZP_18089447.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
gi|440709003|ref|ZP_20889663.1| ClpB protein [Vibrio cholerae 4260B]
gi|443502818|ref|ZP_21069807.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
gi|443506731|ref|ZP_21073521.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
gi|443510838|ref|ZP_21077502.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
gi|443514400|ref|ZP_21080939.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
gi|443518213|ref|ZP_21084630.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
gi|443523080|ref|ZP_21089320.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
gi|443530710|ref|ZP_21096726.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
gi|443538060|ref|ZP_21103916.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
gi|449053972|ref|ZP_21732640.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
gi|54035907|sp|Q9KU18.1|CLPB_VIBCH RecName: Full=Chaperone protein ClpB
gi|9655153|gb|AAF93876.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547995|gb|EAX58075.1| clpB protein [Vibrio cholerae 2740-80]
gi|227008779|gb|ACP04991.1| clpB protein [Vibrio cholerae M66-2]
gi|229344183|gb|EEO09158.1| ClpB protein [Vibrio cholerae RC9]
gi|229354280|gb|EEO19210.1| ClpB protein [Vibrio cholerae B33]
gi|229357894|gb|EEO22811.1| ClpB protein [Vibrio cholerae BX 330286]
gi|229371344|gb|ACQ61767.1| ClpB protein [Vibrio cholerae MJ-1236]
gi|254846746|gb|EET25160.1| chaperone protein clpB [Vibrio cholerae MO10]
gi|255738463|gb|EET93852.1| ClpB protein [Vibrio cholera CIRS 101]
gi|262030087|gb|EEY48732.1| ClpB protein [Vibrio cholerae INDRE 91/1]
gi|340042924|gb|EGR03887.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
gi|340043218|gb|EGR04178.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
gi|341625017|gb|EGS50490.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
gi|341626188|gb|EGS51594.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
gi|341626667|gb|EGS52030.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
gi|341640689|gb|EGS65270.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
gi|341648353|gb|EGS72417.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
gi|356420482|gb|EHH74008.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
gi|356421196|gb|EHH74701.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
gi|356426019|gb|EHH79358.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
gi|356433702|gb|EHH86889.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
gi|356434213|gb|EHH87395.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
gi|356437743|gb|EHH90829.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
gi|356442787|gb|EHH95622.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
gi|356447761|gb|EHI00549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
gi|356456276|gb|EHI08885.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
gi|356645774|gb|AET25829.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794076|gb|AFC57547.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
gi|395922507|gb|EJH33323.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
gi|395925890|gb|EJH36687.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
gi|395934789|gb|EJH45527.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
gi|395937398|gb|EJH48117.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
gi|395944933|gb|EJH55605.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
gi|395948543|gb|EJH59188.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
gi|395962410|gb|EJH72709.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
gi|395963603|gb|EJH73866.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
gi|395966424|gb|EJH76549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
gi|395974598|gb|EJH84123.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
gi|395977461|gb|EJH86871.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
gi|395979149|gb|EJH88513.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
gi|408009468|gb|EKG47374.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
gi|408016239|gb|EKG53793.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
gi|408044616|gb|EKG80522.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
gi|408046325|gb|EKG82025.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
gi|408611448|gb|EKK84809.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
gi|408627125|gb|EKK99950.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
gi|408640334|gb|EKL12129.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
gi|408658151|gb|EKL29223.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
gi|408659180|gb|EKL30235.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
gi|408848198|gb|EKL88251.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
gi|408849139|gb|EKL89172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
gi|408873240|gb|EKM12442.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
HC-62B1]
gi|408881203|gb|EKM20113.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
gi|439975744|gb|ELP51856.1| ClpB protein [Vibrio cholerae 4260B]
gi|443432938|gb|ELS75459.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
gi|443436762|gb|ELS82879.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
gi|443440325|gb|ELS90014.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
gi|443444420|gb|ELS97694.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
gi|443448255|gb|ELT04890.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
gi|443451030|gb|ELT11294.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
gi|443458911|gb|ELT26306.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
gi|443466493|gb|ELT41151.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
gi|448266545|gb|EMB03772.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 32/248 (12%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD + IAEV + TGIP + R +R++ L KR+ GQNDA+ I A+ + +A
Sbjct: 475 VDADLIAEVLASATGIPIFKLTEEESSRLLRMEDELHKRIIGQNDAVKSISRAIRRTRAG 534
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K +R G F+FAGP GK ELAKA+A L+ + D+ LI DM Y+E ++
Sbjct: 535 LK--DPKRPSGSFIFAGPTGVGKTELAKALAEFLFGDEDS---LISLDMSEYSEKHTVSR 589
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
F S L V+++P+SVVLFD++EKA+S I N LL+IL+ D ++G
Sbjct: 590 LFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHSDIFNSLLQILE-DGRLTDSQG 648
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTA-------------TYGRVNEVTGSLFKPSLL 383
D NT+IIMT++L V + RVNE F+P L
Sbjct: 649 -REVDFKNTIIIMTTNLGTRDVSSGLQMGFQVEGDTKTNYDRMKQRVNEELKQHFRPEFL 707
Query: 384 KLLDKLVV 391
+D +V
Sbjct: 708 NRVDDTIV 715
>gi|116054188|ref|YP_788632.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421172222|ref|ZP_15629998.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
gi|115589409|gb|ABJ15424.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|404538083|gb|EKA47640.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
Length = 850
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 143 KRVKDYSKILDQIDAR---VHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMR 199
KR+++ + L+QI R G E+ V VE+IAE+ SKLTGIP + + E+ ++
Sbjct: 446 KRIQERKEHLEQITERWQQTQGSKTEE--VRVEDIAEIISKLTGIPVTELTAEEREKLLQ 503
Query: 200 VQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL-SSRRQLGLFLFAGPNCSGKAELAKAI 258
++ RL +RV GQ +AI + +A+ + A+ GL R + FLF GP GK ELAKA+
Sbjct: 504 MEERLHQRVIGQQEAITAVSDAV---RLARAGLRQGSRPIATFLFLGPTGVGKTELAKAL 560
Query: 259 ANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVL 306
A ++ + D +I DM Y E ++ + L V++RPYSV+L
Sbjct: 561 AEVVFGDEDA---MIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVIL 617
Query: 307 FDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT 366
D+IEKA++ + N+LL++ D R D TNT+II TS+L E + +
Sbjct: 618 LDEIEKAHADVNNILLQVF--DDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGE 675
Query: 367 YGRV-----NEVTGSL---FKPSLLKLLDKLVVID 393
+ + E+ +L F+P L LD+++V +
Sbjct: 676 FAQPPEKLKRELMTTLRGHFRPEFLNRLDEVIVFE 710
>gi|241662872|ref|YP_002981232.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
gi|240864899|gb|ACS62560.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
Length = 862
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + T E+ ++++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVAKMMTGEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G++ + G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 --GIADENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M T G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNL-GSQLIQQMATEPADVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|309782202|ref|ZP_07676931.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
gi|404377897|ref|ZP_10982997.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
gi|308918973|gb|EFP64641.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
gi|348616016|gb|EGY65522.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
Length = 862
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + T E+ ++++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVAKMMTGEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G++ + G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 --GIADENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M T G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNL-GSQLIQQMATEPADVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|223997144|ref|XP_002288245.1| member of the HSP104/clp superfamily [Thalassiosira pseudonana
CCMP1335]
gi|220975353|gb|EED93681.1| member of the HSP104/clp superfamily [Thalassiosira pseudonana
CCMP1335]
Length = 926
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 118/205 (57%), Gaps = 23/205 (11%)
Query: 165 EKLAVDV---EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEA 221
+ LA++V + I E+ S+ TGIPA+ ER + + RLK+RV GQ+ A+D + +
Sbjct: 551 DSLALEVVLPKHITEIISRWTGIPANKLSQTERERLLHLGDRLKERVVGQDGAVDEVTDC 610
Query: 222 LTKPKAAKKGLSSRRQL-GLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNY 280
+ + KA GLS Q G FLF GP GK ELA+AI +ELYD +++ HL+ DM Y
Sbjct: 611 ILRSKA---GLSRPSQPDGSFLFLGPTGVGKTELARAIFSELYD--EDERHLVRIDMSEY 665
Query: 281 TELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTD 328
TE S+ + L V+++PY+VVLFD++EKA+ +L +LL++L D
Sbjct: 666 TEPHSVARLVGAPPGYIGHDEGGQLTEAVRRKPYTVVLFDEVEKAHKQVLTVLLQVL--D 723
Query: 329 FNRKATRGIAAFDLTNTLIIMTSDL 353
R D TNT+II+TS+L
Sbjct: 724 EGRLTDSKGRTVDFTNTVIILTSNL 748
>gi|387769285|ref|ZP_10125549.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
2042]
gi|386906918|gb|EIJ71639.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
2042]
Length = 856
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 197/417 (47%), Gaps = 63/417 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------ 126
L R +++ +Q +K++ D +SR L ++ EL + E ++
Sbjct: 415 LDRRIIQLKLEQQALKKEEDEASRK-RLTMLEKELAEKEREYAELDEIWKSEKATLSGTQ 473
Query: 127 RMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VD 170
++ E ++ + A+R D +K + ++ V +++L+ V
Sbjct: 474 HIKAELENVRMQMEQARRAGDLNK-MSELQYGVIPTLEKQLSDANKAEGKEMTLLRNRVT 532
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAEV S+ TGIP S +E+ +R++ L KRV GQ +A++ + A+ + +A
Sbjct: 533 DEEIAEVLSRATGIPVSRMMEGEKEKLLRMEDELHKRVIGQGEAVEAVANAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 590 GLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDED---AMVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQV---YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + ++ V V G F+P + +D+ VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQGNQDLGYDGMKELVMSVVGQHFRPEFINRIDETVV 761
>gi|187928299|ref|YP_001898786.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
gi|187725189|gb|ACD26354.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
Length = 862
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP + T E+ ++++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVAKMMTGEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G++ + G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 --GIADENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT----ATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M T G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNL-GSQLIQQMATEPADVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|114328467|ref|YP_745624.1| clpB protein [Granulibacter bethesdensis CGDNIH1]
gi|114316641|gb|ABI62701.1| clpB protein [Granulibacter bethesdensis CGDNIH1]
Length = 865
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 133/266 (50%), Gaps = 26/266 (9%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D L + + HG +L AV E+IA V S+ TG+P + MR++
Sbjct: 507 IPDLQAKLSEAENAAHGNAGSRLVSQAVTDEQIAAVVSRWTGVPVDRMLEGERAKLMRME 566
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANE 261
L++RV GQ DA+ + A+ + +A + R +G FLF GP GK EL KA+A
Sbjct: 567 DELRQRVVGQEDALRAVANAVRRARAGLQ--DPNRPIGSFLFLGPTGVGKTELTKALAEF 624
Query: 262 LYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDK 309
L+ D+D ++ DM + E ++ + L V++RPY V+LFD+
Sbjct: 625 LF---DDDRAMVRIDMSEFMEKHAVSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDE 681
Query: 310 IEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDE----QVYEVMLTA 365
+EKA+ + N+LL++L D R D NT+I++TS++ E Q +
Sbjct: 682 VEKAHEDVFNILLQVL--DDGRLTDGQGRTVDFRNTIIVLTSNMGSEILAAQADGEDTSL 739
Query: 366 TYGRVNEVTGSLFKPSLLKLLDKLVV 391
YG+V +V + F+P L LD++V+
Sbjct: 740 VYGQVMQVVRARFRPEFLNRLDEIVL 765
>gi|292900313|ref|YP_003539682.1| chaperone ClpB [Erwinia amylovora ATCC 49946]
gi|291200161|emb|CBJ47287.1| chaperone ClpB (heat shock protein) [Erwinia amylovora ATCC 49946]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIA+V ++ TGIP + ++ +R++ L RV GQ +A++ + +A+ + +A GL
Sbjct: 535 EIADVLARWTGIPVARMMEGERDKLLRMEQELHTRVIGQQEAVEAVSDAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + E+ S+ F+P + +D+LVV
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGALNYGEMKELVMSVVSQNFRPEFINRIDELVV 762
>gi|392971609|ref|ZP_10337003.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|403047073|ref|ZP_10902542.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
gi|392510496|emb|CCI60289.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|402763769|gb|EJX17862.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
Length = 869
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 124/238 (52%), Gaps = 25/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSSWTGIPVSKLVETEREKLLNLSDILHERVVGQDKAVDLVADAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E S+
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASTLF---DSEKHMIRIDMSEYMEKHSVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D+IEKA+S + N+LL+IL+ R
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEIEKAHSDVFNVLLQILEE--GRLTDSKGRE 710
Query: 340 FDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E V+ AT V FKP ++ +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDAGVITDATEKAVMNSLNQYFKPEIINRMDDIVL 768
>gi|16272799|ref|NP_439019.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
Rd KW20]
gi|1168973|sp|P44403.1|CLPB_HAEIN RecName: Full=Chaperone protein ClpB
gi|1573874|gb|AAC22518.1| ATP-dependent Clp protease, ATPase subunit (clpB) [Haemophilus
influenzae Rd KW20]
Length = 856
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 37/271 (13%)
Query: 144 RVKDYSKILDQIDARVHGKFKEKLAVDV--EEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
R+ D K L+Q + GK L V EEIAEV SK TGIP S +E+ +R++
Sbjct: 505 RIPDLEKQLEQAETS-EGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L KRV GQ +A+D + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 564 DELHKRVIGQEEAVDAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLAK 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D+ D ++ DM + E S+ + L V++RPYSV+L D
Sbjct: 621 FLFDSED---AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDL--------KDEQVYE 360
++EKA++ + N+LL++L D R D NT++IMTS+L KDE E
Sbjct: 678 EVEKAHADVFNILLQVL--DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSE 735
Query: 361 VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ V V F+P + +D+ VV
Sbjct: 736 M-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|443291207|ref|ZP_21030301.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Micromonospora lupini str. Lupac 08]
gi|385885609|emb|CCH18408.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Micromonospora lupini str. Lupac 08]
Length = 851
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 43/287 (14%)
Query: 161 GKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
G + V +EIAEV S+ TGIP S + +R +R++G L ++V GQ+DA+ + E
Sbjct: 490 GSSSQVPEVGPQEIAEVVSRATGIPVSQLTEEERDRLLRLEGHLHEKVVGQDDAVTAVAE 549
Query: 221 ALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGN 279
A+ + +A GL+ R +G FLF GP GK ELA+A+A L+ D ++ DM
Sbjct: 550 AVRRSRA---GLADPERPMGSFLFLGPTGVGKTELARALAEALFGEAD---RMVRVDMSE 603
Query: 280 YTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKT 327
+ E ++ + L V++RPY+VVL D+IEKA+ + N+LL++L
Sbjct: 604 FQERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYAVVLLDEIEKAHPDVFNILLQVL-- 661
Query: 328 DFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG---------------RVNE 372
D R + NT++IMTS+L E + +G R+
Sbjct: 662 DDGRLTDSQGRTVNFKNTVLIMTSNLGSELITGAQRAVGFGTGDVGSEQENDELRERLMR 721
Query: 373 VTGSLFKPSLLKLLDKLVVIDL--AVPLLDTTRLLLREWACEETKRR 417
F+P L +D++++ A L D T LLL EET+RR
Sbjct: 722 RLQENFRPEFLNRIDEVIIFRRLEAEQLRDITALLL-----EETRRR 763
>gi|398804069|ref|ZP_10563072.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
gi|398095077|gb|EJL85427.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
Length = 866
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 24/239 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV ++ TGIP S ++ ++++G+L +RV GQ++AI + A+ + +
Sbjct: 534 VGAEEIAEVVARATGIPVSKLMQGERDKLLQMEGKLHERVVGQDEAISAVANAIRR---S 590
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GLS R G FLF GP GK EL KA+A L+D+ D HLI DM + E S+
Sbjct: 591 RSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRVDMSEFMEKHSVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
D NT+I+MTS++ + ++ T + VT L F+P L +D+ VV
Sbjct: 706 QGRTVDFKNTVIVMTSNIGSPIIQSMVGKPTEEIKDAVTDELKNYFRPEFLNRIDETVV 764
>gi|343517922|ref|ZP_08754918.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
gi|343394773|gb|EGV07320.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
Length = 856
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 195/414 (47%), Gaps = 57/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL D E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELSDKEREYAELEEVWKSEKAALSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEI 174
D + + A+R D SK+ + Q+ A G+ KE + V EEI
Sbjct: 477 QALDAAKTEMEQARRAGDLSKMSELQYGRIPELEKQLAAAETGEGKEMSLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVFKMMEGEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + + +YG V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSD-LIQGSKDESYGEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|183597507|ref|ZP_02959000.1| hypothetical protein PROSTU_00781 [Providencia stuartii ATCC 25827]
gi|188023153|gb|EDU61193.1| ATP-dependent chaperone protein ClpB [Providencia stuartii ATCC
25827]
Length = 857
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAE+ ++ TGIP S E+ +R++ +L +RV GQ++A+ + A+ + +A GL
Sbjct: 535 EIAEILARWTGIPVSRMLESEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G F+F GP GK EL KA+AN ++ D+D+ ++ DM + E ++
Sbjct: 592 SDPNRPIGSFMFLGPTGVGKTELCKALANFMF---DSDDAMVRIDMSEFMEKHAVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E T Y V EV F+P + +D++VV
Sbjct: 707 VDFRNTVIIMTSNLGSDLIQERFGTIGYSEMKDMVMEVVSHSFRPEFINRIDEVVV 762
>gi|424809681|ref|ZP_18235058.1| clpB protein [Vibrio mimicus SX-4]
gi|342323169|gb|EGU18955.1| clpB protein [Vibrio mimicus SX-4]
Length = 823
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 501 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 557
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 558 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMVRVDMSEFMEKHSVARLVG 614
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 615 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 672
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 673 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 728
>gi|153829376|ref|ZP_01982043.1| clpB protein, partial [Vibrio cholerae 623-39]
gi|148875159|gb|EDL73294.1| clpB protein [Vibrio cholerae 623-39]
Length = 839
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|424639638|ref|ZP_18077534.1| ATPase associated with various cellular activities family protein
[Vibrio cholerae HC-56A1]
gi|424647721|ref|ZP_18085397.1| ATPase associated with various cellular activities family protein
[Vibrio cholerae HC-57A1]
gi|408026544|gb|EKG63546.1| ATPase associated with various cellular activities family protein
[Vibrio cholerae HC-56A1]
gi|408036433|gb|EKG72865.1| ATPase associated with various cellular activities family protein
[Vibrio cholerae HC-57A1]
Length = 465
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 143 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 199
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 200 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 256
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L ++++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 257 APPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 314
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 315 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 370
>gi|314933186|ref|ZP_07840551.1| ATP-dependent chaperone protein ClpB [Staphylococcus caprae C87]
gi|313653336|gb|EFS17093.1| ATP-dependent chaperone protein ClpB [Staphylococcus caprae C87]
Length = 870
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHERVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A G ++E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDA--GEISESTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|261212183|ref|ZP_05926469.1| ClpB protein [Vibrio sp. RC341]
gi|260838791|gb|EEX65442.1| ClpB protein [Vibrio sp. RC341]
Length = 857
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|407715566|ref|YP_006836846.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Cycloclasticus sp. P1]
gi|407255902|gb|AFT66343.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Cycloclasticus sp. P1]
Length = 859
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 190/414 (45%), Gaps = 55/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R +L ++ ID++ + R D + +D+ +
Sbjct: 361 HSVDITDPAIVSAAVLSH--RYITDRQLPDKAIDLIDESASRIRMEMDSKPESMDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL-----RQIDNELKDAFFELVSFVKLRMQV------ 130
L + +E E L KE D S + L Q+D E D E+ K MQ
Sbjct: 419 LIQLKIEREALKKETDDASIKRLQLLETEIDQLDKEYAD-LEEVWKSEKAAMQGSAQHKE 477
Query: 131 EYDDFVSCVHDAKRVKDYSKILD-----------QIDARVHGKFKEKLA-----VDVEEI 174
E + + A+R D +++ + I G ++ V EEI
Sbjct: 478 ELEKVKLEMETARRAGDLTRMSELQYGEIPRLEKAIQEAEEGSGEQDFTLLRNKVTEEEI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S E+ ++++ L RV GQ +A+ + +A+ + +A GLS
Sbjct: 538 AEVVSKWTGIPVSKMLEGEREKLLQMEVGLSDRVIGQEEAVKAVSDAIRRSRA---GLSD 594
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK EL KA+A L+ D + ++ DM + E S+ +
Sbjct: 595 PNRPNGSFLFLGPTGVGKTELCKALAEFLF---DTEEAIVRIDMSEFMEKHSVARLIGAP 651
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 652 PGYVGYEEGGYLTEAVRRKPYSVILMDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 709
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L +++ E+ A Y V EV G F+P + +D+ VV
Sbjct: 710 FRNTVIVMTSNLGSDRIQELAGEANYNEMKSAVMEVVGQHFRPEFINRIDESVV 763
>gi|86751350|ref|YP_487846.1| ATPase AAA [Rhodopseudomonas palustris HaA2]
gi|86574378|gb|ABD08935.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2]
Length = 879
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 193/415 (46%), Gaps = 53/415 (12%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E+ H ++I D AL A+ ++ R L ++ ID++ + R D +ELD
Sbjct: 360 EQHHGVRIADSALVAATTLSN--RYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSM 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------L 126
+ R +E E L KE +D S+S L ++ EL D + + +
Sbjct: 418 DREIVRLKIEQEALKKE-SDAGSKS-RLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQ 475
Query: 127 RMQVEYDDFVSCVHDAKRVKDYS--------------KILDQIDARVHGKFKEKLAVDVE 172
+++ E D + DA+R +Y K L I+A + + AV +
Sbjct: 476 KLKSELDGLRLELADAQRRGEYQRAGELAYGRIPELEKRLADIEANENAGEMMEEAVTAD 535
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IA+V S+ TG+P +E+ +R++ ++ KRV GQ +A+ + A+ + +A +
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQIGKRVVGQFEAVHAVSTAVRRARAGLQ-- 593
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF--- 289
R +G F+F GP GK EL KA+A L+ D++ ++ DM Y E S+
Sbjct: 594 DPNRPMGSFMFLGPTGVGKTELTKALAQYLF---DDETAMVRLDMSEYMEKHSVARLIGA 650
Query: 290 ------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
+D AL V++RPY VVLFD+IEKA+ + N+LL++L D R
Sbjct: 651 PPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NTLI+MTS+L E + G V E + F+P L +D++++
Sbjct: 709 DFRNTLIVMTSNLGSEYLVNQPEGEDTGVVREQVMDMVRAHFRPEFLNRVDEIIL 763
>gi|323491099|ref|ZP_08096289.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
gi|323314646|gb|EGA67720.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
Length = 857
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL------------------ 120
+ + +E + L+ E D S + + +++EL D F EL
Sbjct: 419 IIQLKIEQQALINEHDDASEKRLTI--LNDELADKEREFAELEEVWNAEKAALSGTQHIK 476
Query: 121 VSFVKLRMQVEYDDFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDV 171
+ + RM +E F D R+ + Y +I + Q+D + +E + V
Sbjct: 477 SALEQARMDME---FARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIA+V SK TGIP S +E+ +R++ L K V GQ +A++V+ A+ + +A G
Sbjct: 534 NEIADVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKCVIGQTEAVEVVSNAIRRSRA---G 590
Query: 232 LSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS Q +G FLF GP GK EL K +A ++D+ D ++ DM + E S+
Sbjct: 591 LSDPNQPIGSFLFLGPTGVGKTELCKTLAKFMFDSEDA---MVRIDMSEFMEKHSVARLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E T Y +V +V F+P L +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSTRIQENFGTVDYQGMKDQVMDVVSKHFRPEFLNRVDESVV 762
>gi|262163882|ref|ZP_06031621.1| ClpB protein [Vibrio mimicus VM223]
gi|262027410|gb|EEY46076.1| ClpB protein [Vibrio mimicus VM223]
Length = 823
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 501 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 557
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 558 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMVRVDMSEFMEKHSVARLVG 614
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 615 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 672
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 673 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 728
>gi|403714711|ref|ZP_10940596.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
gi|403211238|dbj|GAB95279.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
Length = 877
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 195/426 (45%), Gaps = 68/426 (15%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++I D AL A + R A L ++ ID++ +G D ELD+
Sbjct: 363 LEVFHGVKILDSALVAA--VVLSDRYIADRFLPDKAIDLVDEGCAVLRTEIDSMPAELDE 420
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE--------------LVSF 123
LRR +E L KE+ D +S + L ++ EL D E L
Sbjct: 421 LIRRLRRLEIEEAALAKEE-DAASHA-RLEELRRELADLRSESDATRAQWEAERQALRRV 478
Query: 124 VKLRMQVEY----DDFVSCVHDAKRVKDYSK-ILDQIDARVHGKFKEKLA---------- 168
LR Q+E D +D R + L ++ ++ G+ +EKLA
Sbjct: 479 QALRAQIEQVRLESDQAERNYDLNRAAELRHGTLPELTRKLEGE-EEKLAGKQHGNKLLR 537
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
V +EIA + ++ TGIP S + +R+ L +RV GQ++A+ ++ +A+ + +
Sbjct: 538 EVVTEDEIATIVARWTGIPVSRLQEGERAKLLRLDEILHERVVGQDEAVQLVADAIIRAR 597
Query: 227 AAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESI 286
+ K RR +G FLF GP GK ELAK +A L+D+ DN ++ DM Y E ++
Sbjct: 598 SGVK--DPRRPIGSFLFLGPTGVGKTELAKTLAQALFDSGDN---VVRIDMSEYQERHTV 652
Query: 287 KHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKAT 334
+ L V+++PYSVVLFD+IEKA+ + N LL++L D R
Sbjct: 653 SRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVL--DDGRLTD 710
Query: 335 RGIAAFDLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+IIMTS++ KD ++ + VN + F+P L
Sbjct: 711 SQGRTVDFRNTVIIMTSNIGSQFLLDGVKDGEITQ----EARDHVNAALRAHFRPEFLNR 766
Query: 386 LDKLVV 391
+D++++
Sbjct: 767 IDEIIL 772
>gi|398873431|ref|ZP_10628689.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
gi|398199644|gb|EJM86580.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
Length = 854
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ M+++
Sbjct: 506 IPDLERSLQMVDQ--HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 SLLHQRVIGQDEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLFDTEEA---MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFKNTVIVMTSNLGSVQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + S F+P + +D++V+ +
Sbjct: 736 RAAVMDAISSHFRPEFINRVDEVVIFE 762
>gi|229545227|ref|ZP_04433952.1| S14 family endopeptidase Clp [Enterococcus faecalis TX1322]
gi|256763055|ref|ZP_05503635.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|256853703|ref|ZP_05559068.1| chaperone protein clpB [Enterococcus faecalis T8]
gi|256956642|ref|ZP_05560813.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis DS5]
gi|256963536|ref|ZP_05567707.1| AAA ATPase [Enterococcus faecalis HIP11704]
gi|257079568|ref|ZP_05573929.1| AAA ATPase [Enterococcus faecalis JH1]
gi|257082053|ref|ZP_05576414.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|257087392|ref|ZP_05581753.1| AAA ATPase [Enterococcus faecalis D6]
gi|257090526|ref|ZP_05584887.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257416567|ref|ZP_05593561.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ARO1/DG]
gi|257419819|ref|ZP_05596813.1| ATP-dependent Clp protease, ATP-binding subunit, partial
[Enterococcus faecalis T11]
gi|294781440|ref|ZP_06746781.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis PC1.1]
gi|300860809|ref|ZP_07106896.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TUSoD
Ef11]
gi|307270881|ref|ZP_07552168.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4248]
gi|307271475|ref|ZP_07552747.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0855]
gi|307287757|ref|ZP_07567797.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0109]
gi|307291032|ref|ZP_07570919.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0411]
gi|312903722|ref|ZP_07762896.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0635]
gi|384513757|ref|YP_005708850.1| chaperone protein ClpB [Enterococcus faecalis OG1RF]
gi|384519183|ref|YP_005706488.1| ATP-dependent chaperone ClpB [Enterococcus faecalis 62]
gi|397700555|ref|YP_006538343.1| ATP-dependent chaperone ClpB [Enterococcus faecalis D32]
gi|422684254|ref|ZP_16742497.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4000]
gi|422690149|ref|ZP_16748216.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0630]
gi|422697792|ref|ZP_16755723.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1346]
gi|422701399|ref|ZP_16759240.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1342]
gi|422703729|ref|ZP_16761549.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1302]
gi|422709935|ref|ZP_16767281.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0027]
gi|422724812|ref|ZP_16781288.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2137]
gi|422736841|ref|ZP_16793103.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1341]
gi|422869826|ref|ZP_16916331.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1467]
gi|424675747|ref|ZP_18112644.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis 599]
gi|424760626|ref|ZP_18188238.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R508]
gi|430359357|ref|ZP_19425773.1| S14 family endopeptidase Clp [Enterococcus faecalis OG1X]
gi|430370714|ref|ZP_19429184.1| S14 family endopeptidase Clp [Enterococcus faecalis M7]
gi|229309577|gb|EEN75564.1| S14 family endopeptidase Clp [Enterococcus faecalis TX1322]
gi|256684306|gb|EEU24001.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|256710646|gb|EEU25689.1| chaperone protein clpB [Enterococcus faecalis T8]
gi|256947138|gb|EEU63770.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis DS5]
gi|256954032|gb|EEU70664.1| AAA ATPase [Enterococcus faecalis HIP11704]
gi|256987598|gb|EEU74900.1| AAA ATPase [Enterococcus faecalis JH1]
gi|256990083|gb|EEU77385.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|256995422|gb|EEU82724.1| AAA ATPase [Enterococcus faecalis D6]
gi|256999338|gb|EEU85858.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257158395|gb|EEU88355.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ARO1/DG]
gi|257161647|gb|EEU91607.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T11]
gi|294451478|gb|EFG19939.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis PC1.1]
gi|295113401|emb|CBL32038.1| ATP-dependent chaperone ClpB [Enterococcus sp. 7L76]
gi|300849848|gb|EFK77598.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TUSoD
Ef11]
gi|306497935|gb|EFM67465.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0411]
gi|306501206|gb|EFM70510.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0109]
gi|306511747|gb|EFM80745.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0855]
gi|306512794|gb|EFM81439.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4248]
gi|310632914|gb|EFQ16197.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0635]
gi|315025179|gb|EFT37111.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2137]
gi|315031001|gb|EFT42933.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4000]
gi|315035659|gb|EFT47591.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0027]
gi|315164771|gb|EFU08788.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1302]
gi|315166449|gb|EFU10466.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1341]
gi|315170340|gb|EFU14357.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1342]
gi|315173627|gb|EFU17644.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1346]
gi|315576903|gb|EFU89094.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0630]
gi|323481316|gb|ADX80755.1| ATP-dependent chaperone ClpB [Enterococcus faecalis 62]
gi|327535646|gb|AEA94480.1| chaperone protein ClpB [Enterococcus faecalis OG1RF]
gi|329569969|gb|EGG51724.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1467]
gi|397337194|gb|AFO44866.1| ATP-dependent chaperone ClpB [Enterococcus faecalis D32]
gi|402350383|gb|EJU85287.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis 599]
gi|402403319|gb|EJV35998.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R508]
gi|429513377|gb|ELA02961.1| S14 family endopeptidase Clp [Enterococcus faecalis OG1X]
gi|429515272|gb|ELA04789.1| S14 family endopeptidase Clp [Enterococcus faecalis M7]
Length = 868
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|408822107|ref|ZP_11206997.1| ATP-dependent chaperone ClpB [Pseudomonas geniculata N1]
Length = 861
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 414
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 415 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDGLEREFSDLNEIWKSEKAALQGAT 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 474 KIKEQVEQAKL--ELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 532 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 590 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 704 GRTVDFRNTVIVMTSNLGSHQIQDMSTDDSPEAYTQMKAAVMG----VVQAHFRPEFINR 759
Query: 386 LDKLVV 391
LD +VV
Sbjct: 760 LDDIVV 765
>gi|392953749|ref|ZP_10319303.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
gi|391859264|gb|EIT69793.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
Length = 863
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 57/417 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R L ++ ID++ + R +D + +D+ +
Sbjct: 361 HGVDITDGAIVAAAKLSH--RYITDRNLPDKAIDLIDEAASRIRIEKDSKPEAMDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID-NELKDAFFELVSFVKLRMQV---------E 131
L + +E E L KE + + RS + D +L+ + +L K M E
Sbjct: 419 LIQLKIEREALKKEKDEGAKRSLTALEEDIVKLEREYADLEEIWKAEMATVSGSAHIKEE 478
Query: 132 YDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKLA---------VDVEEIA 175
+ + A+R D S++ L +++ R+ E+ V EEIA
Sbjct: 479 IERVRLDMETARRAGDLSRMAELQYGKLPELERRLAAASTEQKQTKATLVRNNVTEEEIA 538
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV ++ TGIP + ++ +R++ L +RV GQN+A+ + A+ + +A GLS
Sbjct: 539 EVVARWTGIPVAKLMEGERDKLLRMEEALHQRVVGQNEAVTAVSNAIRRSRA---GLSDP 595
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL KA+A+ L+ D + ++ DM + E S+ +
Sbjct: 596 NRPIGSFLFLGPTGVGKTELCKALASFLF---DTEEAMVRIDMSEFMERHSVARLIGAPP 652
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSVVL D++EKA+ + N+LL++L D R D
Sbjct: 653 GYVGFEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDGQGRTVDF 710
Query: 343 TNTLIIMTSDLKDEQVYEVMLTAT----YGRVNE----VTGSLFKPSLLKLLDKLVV 391
N +I+MTS+L + ++M T + Y + E V G F+P + +D+ VV
Sbjct: 711 RNAVIVMTSNLGSNLIQDMMSTQSSSNDYAAIREAVMTVVGQHFRPEFINRIDESVV 767
>gi|385781205|ref|YP_005757376.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 11819-97]
gi|418572641|ref|ZP_13136849.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21333]
gi|364522194|gb|AEW64944.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 11819-97]
gi|371984175|gb|EHP01297.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21333]
Length = 869
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|349575394|ref|ZP_08887312.1| chaperone protein ClpB [Neisseria shayeganii 871]
gi|348013042|gb|EGY51968.1| chaperone protein ClpB [Neisseria shayeganii 871]
Length = 861
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 132/246 (53%), Gaps = 28/246 (11%)
Query: 163 FKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
F+ K+ D E+AE+ S++TGIP S E+ ++++ L +RV GQ++A+ + +A+
Sbjct: 533 FRTKVGAD--EVAEIVSRMTGIPVSKMMEGEREKLLKMEDVLHRRVVGQDEAVRAVADAI 590
Query: 223 TKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYT 281
+ ++ GLS + G FLF GP GK EL K +A L+ D++ HLI DM Y
Sbjct: 591 RR---SRSGLSDPNKPYGSFLFLGPTGVGKTELCKTLAGFLF---DSEEHLIRIDMSEYM 644
Query: 282 ELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDF 329
E SI + L V+++PYSVVL D++EKA+ + N+LL++L D
Sbjct: 645 EKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSVVLLDEVEKAHPDVFNILLQVL--DD 702
Query: 330 NRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKL 385
R D NT+I+MTS++ + + + M TA Y V E F+P L+
Sbjct: 703 GRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ-MGTADYDALKAVVMEDVKQHFRPELINR 761
Query: 386 LDKLVV 391
+D++VV
Sbjct: 762 IDEVVV 767
>gi|307277225|ref|ZP_07558329.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2134]
gi|421512936|ref|ZP_15959726.1| ClpB protein [Enterococcus faecalis ATCC 29212]
gi|306506155|gb|EFM75321.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2134]
gi|401673943|gb|EJS80311.1| ClpB protein [Enterococcus faecalis ATCC 29212]
Length = 868
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|258620376|ref|ZP_05715414.1| clpB protein [Vibrio mimicus VM573]
gi|258587255|gb|EEW11966.1| clpB protein [Vibrio mimicus VM573]
Length = 857
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|219125089|ref|XP_002182821.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405615|gb|EEC45557.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 887
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 113/198 (57%), Gaps = 20/198 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V ++IAEV S+ TGIP + +R +++ RLK+RV GQ+ AI + + + + KA
Sbjct: 540 VTPQDIAEVISRWTGIPVTRLSQTDRDRLLKLDDRLKERVIGQDQAIKEVTDCILRSKA- 598
Query: 229 KKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS Q +G FLF GP GK ELAK++ + L+D ++ HLI DM YTE S+
Sbjct: 599 --GLSRPSQPIGSFLFLGPTGVGKTELAKSLYSSLFDA--DERHLIRIDMSEYTEQHSVA 654
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSVVLFD++EKA+ +L L+L+IL D R
Sbjct: 655 RLIGAPPGYIGHDEGGQLTEAVRRRPYSVVLFDEMEKAHPRVLTLMLQIL--DEGRLTDS 712
Query: 336 GIAAFDLTNTLIIMTSDL 353
D TNT+II+TS++
Sbjct: 713 KGRTVDFTNTVIILTSNV 730
>gi|21282586|ref|NP_645674.1| hypothetical protein MW0857 [Staphylococcus aureus subsp. aureus
MW2]
gi|300912467|ref|ZP_07129910.1| chaperone protein ClpB [Staphylococcus aureus subsp. aureus TCH70]
gi|418987798|ref|ZP_13535471.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1835]
gi|54035863|sp|Q8NXE7.1|CLPB_STAAW RecName: Full=Chaperone protein ClpB
gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. aureus MW2]
gi|300886713|gb|EFK81915.1| chaperone protein ClpB [Staphylococcus aureus subsp. aureus TCH70]
gi|377719586|gb|EHT43756.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1835]
Length = 869
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|256617182|ref|ZP_05474028.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ATCC 4200]
gi|256596709|gb|EEU15885.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ATCC 4200]
Length = 868
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|268680022|ref|YP_003304453.1| ATPase AAA [Sulfurospirillum deleyianum DSM 6946]
gi|268618053|gb|ACZ12418.1| ATPase AAA-2 domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 856
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 193/428 (45%), Gaps = 73/428 (17%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H + IQD AL A++++ R + L ++ ID++ + + EL +
Sbjct: 357 LEAHHNVSIQDSALIAAAKLSS--RYISDRFLPDKAIDLIDEAAAELKMQIESEPTELSR 414
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVS 137
K + +VE E L+ E + L I+ EL DA ++ S ++ ++++
Sbjct: 415 IKRAISTLMVEKEALLMEKNKKNDER--LSAIEKELGDAKEKMRS-----LETQFENEKQ 467
Query: 138 CVHDAKRVKDYSKILDQIDARVHGKFKE-------------------------------- 165
+D +K ++ L + +A + K E
Sbjct: 468 VFNDIAAIKSQAEALRR-EAEIAKKQSEFNKAAEIEYGKLPELLKKEEELKLKWEKMVES 526
Query: 166 ----KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEA 221
K +VD E IA + SK TGIP + + + + V+ LKK V GQ+ AI I A
Sbjct: 527 GTLLKNSVDEEMIATIVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRA 586
Query: 222 LTKPKAAKKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNY 280
+ + KA GLS + + +G FLF GP GK + AKA+AN L+D LI FDM Y
Sbjct: 587 IKRNKA---GLSEQNKPIGSFLFLGPTGVGKTQSAKALANFLFDTT---KALIRFDMSEY 640
Query: 281 TELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTD 328
E S+ + L V+++PYSVVLFD+IEKA+ + N+LL++L D
Sbjct: 641 MEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVL--D 698
Query: 329 FNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKL 385
R D NT+II+TS++ ++ E R EV L FKP L
Sbjct: 699 EGRLTDNKGVTVDFKNTIIILTSNIASSKIMEF---EGEKRTEEVMKELRMHFKPEFLNR 755
Query: 386 LDKLVVID 393
LD +++ +
Sbjct: 756 LDDIIIFN 763
>gi|149377764|ref|ZP_01895497.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
gi|149357936|gb|EDM46425.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
Length = 858
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 202/420 (48%), Gaps = 68/420 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +++ D A+ A+R++ R A +L ++ ID++ + + D + LD+ +
Sbjct: 361 HGVEVTDGAIIAAARLSH--RYIADRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR------SFWLRQIDNELKD-------AFFELVSFVKLRM 128
L + +E E L KE TD +S+ S + I+ E D L K++
Sbjct: 419 LIQLKIEREALKKE-TDAASKKRLSELSEVISGIEREYADLEEVWNTEKAALHGSQKIKS 477
Query: 129 QVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEE 173
Q+E + +A+R D Y +I + Q+D + E + V EE
Sbjct: 478 QLEQARI--DLENARRAGDLGRMSELQYGQIPELERQLDMASQAEMMEMKLLRNRVTDEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV SK TGIP S ++ MR++ L RV GQ++A++ + A+ + +A GLS
Sbjct: 536 IAEVVSKWTGIPVSKMLEGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A+ L+ D + ++ DM + E S+ +
Sbjct: 593 DPHRPNGSFLFLGPTGVGKTELCKALASFLF---DTEEAMVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA-A 339
L V++RPYSV+L D++EKA+ + N+LL++L+ + + T G
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLE---DGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKD--------EQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L E+ YE M + V V G+ F+P + +D++VV
Sbjct: 707 VDFRNTVIVMTSNLGSDIIQQKAGEENYEAMKSD----VMAVVGTHFRPEFINRVDEVVV 762
>gi|39995764|ref|NP_951715.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
gi|409911208|ref|YP_006889673.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
gi|54035778|sp|Q74FF1.1|CLPB_GEOSL RecName: Full=Chaperone protein ClpB
gi|39982528|gb|AAR33988.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
gi|298504774|gb|ADI83497.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
Length = 865
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 32/300 (10%)
Query: 143 KRVKDYSKILDQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQG 202
K + D S L+ D R GK + VD E +AE+ S+ TGIP S ++ + ++
Sbjct: 514 KEIADRSAELE--DIRKEGKMLPE-EVDGELVAEIVSRWTGIPVSRMMEGEADKLVHMED 570
Query: 203 RLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANE 261
RL RV GQ++A+ ++ A+ + A+ GLS R +G FLF GP GK E AKA+A
Sbjct: 571 RLITRVVGQDEALVLVANAIRR---ARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEF 627
Query: 262 LYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDK 309
L+++ D ++ DM Y E ++ + L V++RPYS+VLFD+
Sbjct: 628 LFND---DQAIVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDE 684
Query: 310 IEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR 369
IEKA+ + N+LL++L D R D NT+IIMTS+L + + + ++ Y R
Sbjct: 685 IEKAHPEVFNVLLQVL--DDGRLTDGQGRTVDFRNTVIIMTSNLGSQWIQQYG-SSDYAR 741
Query: 370 ----VNEVTGSLFKPSLLKLLDKLVVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVI 425
V E FKP L +D++V+ A+PL +++ + C K+R D + V+
Sbjct: 742 MKAMVTETLKEGFKPEFLNRIDEIVIYH-ALPLEQIKKIVDIQVEC--LKQRLADRRIVL 798
>gi|258624749|ref|ZP_05719683.1| clpB protein [Vibrio mimicus VM603]
gi|258583036|gb|EEW07851.1| clpB protein [Vibrio mimicus VM603]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|229512401|ref|ZP_04401875.1| ClpB protein [Vibrio cholerae TMA 21]
gi|229350551|gb|EEO15497.1| ClpB protein [Vibrio cholerae TMA 21]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|223043044|ref|ZP_03613092.1| ATP-dependent chaperone ClpB [Staphylococcus capitis SK14]
gi|417907454|ref|ZP_12551226.1| ATP-dependent chaperone protein ClpB [Staphylococcus capitis
VCU116]
gi|222443898|gb|EEE49995.1| ATP-dependent chaperone ClpB [Staphylococcus capitis SK14]
gi|341596040|gb|EGS38671.1| ATP-dependent chaperone protein ClpB [Staphylococcus capitis
VCU116]
Length = 870
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L +RV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHERVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + A G ++E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENVKDA--GEISESTEKAVMDSLHAYFKPEILNRMDDIVL 768
>gi|145632228|ref|ZP_01787963.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145634718|ref|ZP_01790426.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
PittAA]
gi|260579950|ref|ZP_05847780.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
gi|144987135|gb|EDJ93665.1| DNA polymerase I [Haemophilus influenzae 3655]
gi|145267884|gb|EDK07880.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
PittAA]
gi|260093234|gb|EEW77167.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
Length = 856
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 37/271 (13%)
Query: 144 RVKDYSKILDQIDARVHGKFKEKLAVDV--EEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
R+ D K L+Q + GK L V EEIAEV SK TGIP S +E+ +R++
Sbjct: 505 RIPDLEKQLEQAETS-EGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L KRV GQ +A+D + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 564 DELHKRVIGQEEAVDAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLAK 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D+ D ++ DM + E S+ + L V++RPYSV+L D
Sbjct: 621 FLFDSED---AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDL--------KDEQVYE 360
++EKA++ + N+LL++L D R D NT++IMTS+L KDE E
Sbjct: 678 EVEKAHADVFNILLQVL--DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSE 735
Query: 361 VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ V V F+P + +D+ VV
Sbjct: 736 M-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|415799266|ref|ZP_11498764.1| chaperone protein clpB domain protein, partial [Escherichia coli
E128010]
gi|323161335|gb|EFZ47243.1| chaperone protein clpB domain protein [Escherichia coli E128010]
Length = 353
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL
Sbjct: 31 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GL 87
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+
Sbjct: 88 ADPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVG 144
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 145 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 202
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 203 VDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 258
>gi|422695871|ref|ZP_16753849.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4244]
gi|315146641|gb|EFT90657.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4244]
Length = 868
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-binding protein ClpB [Enterococcus
faecalis V583]
gi|227517049|ref|ZP_03947098.1| S14 family endopeptidase Clp [Enterococcus faecalis TX0104]
gi|227553894|ref|ZP_03983941.1| S14 family endopeptidase Clp [Enterococcus faecalis HH22]
gi|229549466|ref|ZP_04438191.1| S14 family endopeptidase Clp [Enterococcus faecalis ATCC 29200]
gi|255972169|ref|ZP_05422755.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T1]
gi|255975233|ref|ZP_05425819.1| AAA ATPase [Enterococcus faecalis T2]
gi|257084680|ref|ZP_05579041.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|307285326|ref|ZP_07565470.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0860]
gi|312899787|ref|ZP_07759106.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0470]
gi|312953399|ref|ZP_07772239.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0102]
gi|422693157|ref|ZP_16751171.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0031]
gi|422714907|ref|ZP_16771631.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309A]
gi|422717416|ref|ZP_16774101.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309B]
gi|422726009|ref|ZP_16782466.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0312]
gi|422729592|ref|ZP_16785993.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0012]
gi|422736951|ref|ZP_16793208.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2141]
gi|424678975|ref|ZP_18115811.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV103]
gi|424682105|ref|ZP_18118888.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV116]
gi|424684303|ref|ZP_18121023.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV129]
gi|424688226|ref|ZP_18124840.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV25]
gi|424691754|ref|ZP_18128271.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV31]
gi|424694514|ref|ZP_18130913.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV37]
gi|424695721|ref|ZP_18132098.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV41]
gi|424702154|ref|ZP_18138317.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV62]
gi|424703913|ref|ZP_18140034.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV63]
gi|424711917|ref|ZP_18144123.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV65]
gi|424717269|ref|ZP_18146565.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV68]
gi|424722338|ref|ZP_18151402.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV72]
gi|424726020|ref|ZP_18154707.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV73]
gi|424731263|ref|ZP_18159849.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV81]
gi|424746055|ref|ZP_18174308.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV85]
gi|424754961|ref|ZP_18182851.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV93]
gi|428767573|ref|YP_007153684.1| chaperone protein / clpB Protease [Enterococcus faecalis str.
Symbioflor 1]
gi|54035825|sp|Q831Y7.1|CLPB_ENTFA RecName: Full=Chaperone protein ClpB
gi|29344321|gb|AAO82080.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Enterococcus
faecalis V583]
gi|227075496|gb|EEI13459.1| S14 family endopeptidase Clp [Enterococcus faecalis TX0104]
gi|227176978|gb|EEI57950.1| S14 family endopeptidase Clp [Enterococcus faecalis HH22]
gi|229305381|gb|EEN71377.1| S14 family endopeptidase Clp [Enterococcus faecalis ATCC 29200]
gi|255963187|gb|EET95663.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T1]
gi|255968105|gb|EET98727.1| AAA ATPase [Enterococcus faecalis T2]
gi|256992710|gb|EEU80012.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|306502903|gb|EFM72165.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0860]
gi|310628608|gb|EFQ11891.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0102]
gi|311293037|gb|EFQ71593.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0470]
gi|315146032|gb|EFT90048.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2141]
gi|315150193|gb|EFT94209.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0012]
gi|315152067|gb|EFT96083.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0031]
gi|315159129|gb|EFU03146.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0312]
gi|315574405|gb|EFU86596.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309B]
gi|315580121|gb|EFU92312.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309A]
gi|402349820|gb|EJU84740.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV116]
gi|402349840|gb|EJU84759.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV103]
gi|402361286|gb|EJU95854.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV31]
gi|402361495|gb|EJU96054.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV25]
gi|402361923|gb|EJU96465.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV129]
gi|402370031|gb|EJV04275.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV62]
gi|402370503|gb|EJV04707.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV37]
gi|402379362|gb|EJV13171.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV41]
gi|402382594|gb|EJV16252.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV65]
gi|402383470|gb|EJV17071.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV63]
gi|402385924|gb|EJV19445.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV68]
gi|402389152|gb|EJV22555.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV72]
gi|402390012|gb|EJV23383.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV73]
gi|402392894|gb|EJV26128.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV81]
gi|402397951|gb|EJV30937.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV85]
gi|402401636|gb|EJV34397.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV93]
gi|427185746|emb|CCO72970.1| chaperone protein / clpB Protease [Enterococcus faecalis str.
Symbioflor 1]
Length = 868
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|398931122|ref|ZP_10664981.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
gi|398164265|gb|EJM52407.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
Length = 854
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ M+++
Sbjct: 506 IPDLERSLQMVDQ--HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 SLLHQRVIGQDEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLFDTEEA---MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFKNTVIVMTSNLGSVQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + S F+P + +D++V+ +
Sbjct: 736 RAAVMDAISSHFRPEFINRVDEVVIFE 762
>gi|417866682|ref|ZP_12511722.1| hypothetical protein C22711_3610 [Escherichia coli O104:H4 str.
C227-11]
gi|341919971|gb|EGT69580.1| hypothetical protein C22711_3610 [Escherichia coli O104:H4 str.
C227-11]
Length = 334
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP S E+ +R++ L RV GQN+A+D + A+ + +A GL
Sbjct: 12 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA---GL 68
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++ D+D ++ DM + E S+
Sbjct: 69 ADPNRPIGSFLFLGPTGVGKTELCKALANFMF---DSDEAMVRIDMSEFMEKHSVSRLVG 125
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 126 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 183
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + E V F+P + +D++VV
Sbjct: 184 VDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 239
>gi|408374171|ref|ZP_11171861.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
gi|407766056|gb|EKF74503.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
Length = 861
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 128/241 (53%), Gaps = 33/241 (13%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +++ +R++ L +RV GQ++A++ + A+ + +A G
Sbjct: 538 EEIAEVVSKWTGIPVSKMLEGEKDKLLRMEEALHQRVVGQDEAVEAVANAVRRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+AN L+ D + ++ DM + E S+
Sbjct: 595 LSDPNRPNGSFLFLGPTGVGKTELCKALANFLF---DTEEAMVRIDMSEFMEKHSVARLV 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQV--------YEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+++MTS+L + + YE M A V EV G+ F+P + +D+ V
Sbjct: 710 TVDFRNTVVVMTSNLGSDLIQKLAGDNDYEAMKAA----VMEVVGNHFRPEFINRVDETV 765
Query: 391 V 391
V
Sbjct: 766 V 766
>gi|421342009|ref|ZP_15792416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
gi|395945512|gb|EJH56177.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
Length = 823
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 501 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 557
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 558 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMVRVDMSEFMEKHSVARLVG 614
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 615 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 672
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 673 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 728
>gi|358061232|ref|ZP_09147895.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus simiae CCM 7213]
gi|357256286|gb|EHJ06671.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus simiae CCM 7213]
Length = 870
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S ++ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETERDKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A+ L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLASSLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA+S + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQILLENV--KETGEITESTEKAVMNSLNAYFKPEILNRMDDIVL 768
>gi|72383760|ref|YP_293114.1| AAA ATPase [Ralstonia eutropha JMP134]
gi|72123103|gb|AAZ65257.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha
JMP134]
Length = 942
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 131/244 (53%), Gaps = 29/244 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E++A+V + LTG+P S + E+ +R++ RL++RV GQ++A+ + A+ + +
Sbjct: 591 VTAEDVAQVVASLTGVPVSELTAEDREKLLRLEDRLRERVVGQDEAVSAVARAV---RLS 647
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + FLF GP GK ELAKA+A ++ D++N L+ DM Y+E ++
Sbjct: 648 RAGLTEGGKPTASFLFLGPTGVGKTELAKALAASVF---DDENALVRIDMSEYSERHTVA 704
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
S L V++RPYSVVL D+IEKA+S + N+LL++ D R
Sbjct: 705 RLVGSPPGYVGYEEGGQLTERVRRRPYSVVLLDEIEKAHSEVHNILLQLF--DEGRLTDG 762
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVM--------LTATYGRVNEVTGSLFKPSLLKLLD 387
D TNT+II TS++ + + + M A R+ EV F+P L +D
Sbjct: 763 KGRLVDFTNTIIIATSNIGSQMIQDNMRADKTQLDYPALRDRLMEVLRHHFRPEFLNRVD 822
Query: 388 KLVV 391
++VV
Sbjct: 823 EVVV 826
>gi|418930961|ref|ZP_13484808.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377715798|gb|EHT39984.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1750]
Length = 864
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 533 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 591
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 592 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 647
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 648 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 705
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 706 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTNLNAYFKPEILNRMDDIVL 763
>gi|422921936|ref|ZP_16955141.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
gi|341647481|gb|EGS71560.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|237745846|ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
gi|229377197|gb|EEO27288.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
Length = 864
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 200/429 (46%), Gaps = 83/429 (19%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKG---IKRCLNSRDKYQKELDKH 78
H ++I D A+ A+ ++ R L ++ ID++ + IK ++S+ + LD+
Sbjct: 361 HGVEISDPAIIAAAELSH--RYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDRLDRR 418
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFW------LRQIDNELKD---------AFFELVSF 123
L+ +E E VK++TD +SR + +++ E D A E
Sbjct: 419 IIQLK---IEREA-VKKETDEASRKRLALLEEEIAKLEKEYADYDEILKAEKAGVEGSKH 474
Query: 124 VK-----LRMQVEYDDFVSCVHDAKRVKDYSKILDQI-----------------DARVHG 161
+K +R+Q+E +AKR DY K+ + + DAR+
Sbjct: 475 IKEEIEKIRLQIE---------EAKRRGDYQKMSELMYGRLPELEKALAMENDKDARLEH 525
Query: 162 KFKEKL--AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIF 219
L VD EEIAEV S+ TGIP S ++ + ++ L KRV GQ++AI +
Sbjct: 526 AHPRLLRTEVDAEEIAEVVSRATGIPVSKMMQGERDKLLHMEDELHKRVVGQHEAIVAVS 585
Query: 220 EALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMG 278
EA+ + +A GLS R G F+F GP GK EL KA+A L+D D +I DM
Sbjct: 586 EAIRRSRA---GLSDPNRPYGSFMFLGPTGVGKTELCKALAGFLFDTEDA---MIRIDMS 639
Query: 279 NYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK 326
+ E S+ + L V+++PYSV+L D+IEKA+ + N+LL++L
Sbjct: 640 EFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVL- 698
Query: 327 TDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSL 382
D R D NT+I+MTS+L Q+ + M + G V E F+P
Sbjct: 699 -DDGRMTDGQGRTVDFKNTVIVMTSNL-GSQLIQSMGGSDQGLVKMAVMEEVRKHFRPEF 756
Query: 383 LKLLDKLVV 391
+ +D++VV
Sbjct: 757 INRVDEIVV 765
>gi|88194669|ref|YP_499465.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|379014170|ref|YP_005290406.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus VC40]
gi|417649789|ref|ZP_12299579.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21189]
gi|87202227|gb|ABD30037.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|329726187|gb|EGG62657.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21189]
gi|374362867|gb|AEZ36972.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus VC40]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|409357503|ref|ZP_11235881.1| putative ATP-dependent protease regulatory subunit [Dietzia
alimentaria 72]
Length = 850
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 191/412 (46%), Gaps = 60/412 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R L ++ ID++ + R D +E+D +
Sbjct: 365 HGVRITDSALVSAATLSD--RYITQRFLPDKAIDLVDEAASRLKMEIDSRPEEIDAVERI 422
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------LRMQ 129
+RR +E E ++++TD +S+ + + EL D+ +L +++
Sbjct: 423 VRRLEIE-EMALQKETDAASKDRLI-ALQGELADSKEKLAELTARWQNEKHAIEGVQKVK 480
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEE 173
E D + A+R DY+++ + R+ + +++LA V E+
Sbjct: 481 EELDALRTESEKAERDGDYARVAEIRYGRLP-ELEKQLADAEESEAASGAMLKEEVGPED 539
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
+AEV S TGIP E+ +R++ L KRV GQ++A+ + +A+ + +A
Sbjct: 540 VAEVVSTWTGIPVGKMLEGETEKLLRMEDELGKRVVGQSEAVQAVSDAVRRARAGVA--D 597
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK ELAK +A L+ D+D ++ DM Y+E S+ +
Sbjct: 598 PNRPTGSFLFLGPTGVGKTELAKTLAQFLF---DDDRAMVRIDMSEYSEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY++VL D++EKA+ + ++LL++L D R D
Sbjct: 655 PGYVGYEAGGQLTEAVRRRPYTIVLLDEVEKAHPDVFDILLQVL--DDGRLTDGQGRTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
NT++++TS+L E ML A FKP + LD +V+ D
Sbjct: 713 FRNTILVLTSNLGAGGSREQMLDAVK--------RAFKPEFINRLDDVVIFD 756
>gi|260581686|ref|ZP_05849483.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
gi|260095279|gb|EEW79170.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
Length = 856
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 37/271 (13%)
Query: 144 RVKDYSKILDQIDARVHGKFKEKLAVDV--EEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
R+ D K L+Q + GK L V EEIAEV SK TGIP S +E+ +R++
Sbjct: 505 RIPDLEKQLEQAETS-EGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L KRV GQ +A+D + A+ + +A GLS R +G FLF GP GK EL K +A
Sbjct: 564 EELHKRVIGQEEAVDAVANAIRRSRA---GLSDPNRPIGSFLFLGPTGVGKTELCKTLAK 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D+ D ++ DM + E S+ + L V++RPYSV+L D
Sbjct: 621 FLFDSED---AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDL--------KDEQVYE 360
++EKA++ + N+LL++L D R D NT++IMTS+L KDE E
Sbjct: 678 EVEKAHADVFNILLQVL--DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSE 735
Query: 361 VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+ V V F+P + +D+ VV
Sbjct: 736 M-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|238752926|ref|ZP_04614388.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
gi|238708834|gb|EEQ01090.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALNKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDVEEIA 175
+ + A+RV D +K+ + ++ + +++LA V E+A
Sbjct: 479 LEQAKITLEQARRVGDLAKMSELQYGKIP-ELEKQLAAATALEGQTMKLLRNRVTEVEVA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV ++ TGIP S ++ +R++ L KRV GQN+A++ + A+ + +A GLS
Sbjct: 538 EVLARWTGIPVSRMLESERDKLLRMEEDLHKRVIGQNEAVEAVSNAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL KA+A L+ D+D+ ++ DM + E S+ +
Sbjct: 595 NRPIGSFLFLGPTGVGKTELCKALAMFLF---DSDDAMVRIDMSEFMEKHSVSRLVGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 710 RNTVVIMTSNLGSDLIQERFGERSYAEMKDMVMEVVTHHFRPEFINRIDEVVV 762
>gi|121730758|ref|ZP_01682855.1| ATPase family associated with various cellular activities (AAA)
protein [Vibrio cholerae V52]
gi|121627669|gb|EAX60331.1| ATPase family associated with various cellular activities (AAA)
protein [Vibrio cholerae V52]
Length = 338
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 95 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 151
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 152 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 208
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 209 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 266
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 267 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNGVDESVV 322
>gi|428201915|ref|YP_007080504.1| ATP-dependent chaperone ClpB [Pleurocapsa sp. PCC 7327]
gi|427979347|gb|AFY76947.1| ATP-dependent chaperone ClpB [Pleurocapsa sp. PCC 7327]
Length = 871
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 34/241 (14%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAE+ SK TGIP S +E+ + ++ L +RV GQ++A+ + EA+ + +A GL
Sbjct: 540 DIAEIISKWTGIPVSKLVESEKEKLLHLEDELHQRVIGQDEAVTAVAEAIQRSRA---GL 596
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R F+F GP GK ELAKA+A L+ D + ++ DM Y E S+
Sbjct: 597 ADPNRPTASFIFLGPTGVGKTELAKALAASLF---DTEEAMVRIDMSEYMEKHSVSRLMG 653
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++RPYSV+LFD+IEKA++ + N++L+IL D R
Sbjct: 654 APPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQIL--DDGRLTDSQGHV 711
Query: 340 FDLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT+IIMTS++ DE YE M + RV + S F+P L +D+++
Sbjct: 712 VDFKNTIIIMTSNIGSQYILDLAGDESRYEEMRS----RVMDAMRSSFRPEFLNRIDEII 767
Query: 391 V 391
+
Sbjct: 768 I 768
>gi|379020673|ref|YP_005297335.1| ClpB protein [Staphylococcus aureus subsp. aureus M013]
gi|418950523|ref|ZP_13502689.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-160]
gi|359829982|gb|AEV77960.1| ClpB protein [Staphylococcus aureus subsp. aureus M013]
gi|375376776|gb|EHS80291.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-160]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITEPTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|238798951|ref|ZP_04642414.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
gi|238717180|gb|EEQ09033.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 196/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLAVDVEE--IAE 176
+ + A+RV D Y KI + Q+ A + GK + L V E IA+
Sbjct: 479 LEQAKITLEQARRVGDLARMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEVEIAD 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP S ++ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A L+D++D ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALATFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMT----SDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMT SDL E+ E T V EV F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYTEMKNMVMEVVTHHFRPEFINRIDEVVV 762
>gi|153215108|ref|ZP_01949815.1| clpB protein [Vibrio cholerae 1587]
gi|153826762|ref|ZP_01979429.1| clpB protein [Vibrio cholerae MZO-2]
gi|229530515|ref|ZP_04419903.1| ClpB protein [Vibrio cholerae 12129(1)]
gi|254224985|ref|ZP_04918599.1| clpB protein [Vibrio cholerae V51]
gi|254291987|ref|ZP_04962767.1| clpB protein [Vibrio cholerae AM-19226]
gi|297580832|ref|ZP_06942758.1| chaperone clpB [Vibrio cholerae RC385]
gi|417819563|ref|ZP_12466179.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
gi|417823828|ref|ZP_12470420.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
gi|419835628|ref|ZP_14359073.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
gi|421350540|ref|ZP_15800906.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
gi|422306203|ref|ZP_16393387.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
gi|423733990|ref|ZP_17707206.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
gi|423947665|ref|ZP_17733624.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
gi|423976935|ref|ZP_17737172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
gi|424008275|ref|ZP_17751225.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
gi|424589954|ref|ZP_18029401.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
gi|124114899|gb|EAY33719.1| clpB protein [Vibrio cholerae 1587]
gi|125622372|gb|EAZ50692.1| clpB protein [Vibrio cholerae V51]
gi|149739413|gb|EDM53653.1| clpB protein [Vibrio cholerae MZO-2]
gi|150422126|gb|EDN14093.1| clpB protein [Vibrio cholerae AM-19226]
gi|229332288|gb|EEN97776.1| ClpB protein [Vibrio cholerae 12129(1)]
gi|297535248|gb|EFH74083.1| chaperone clpB [Vibrio cholerae RC385]
gi|340041125|gb|EGR02093.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
gi|340048457|gb|EGR09379.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
gi|395954662|gb|EJH65272.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
gi|408036118|gb|EKG72565.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
gi|408627166|gb|EKK99985.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
gi|408631760|gb|EKL04288.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
gi|408661665|gb|EKL32649.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
gi|408666033|gb|EKL36836.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
gi|408859041|gb|EKL98711.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
gi|408866145|gb|EKM05534.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|49485751|ref|YP_042972.1| ATPase of an ATP-dependent protease [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651666|ref|YP_185847.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus COL]
gi|87160081|ref|YP_493577.1| chaperone clpB [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|151221057|ref|YP_001331879.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509174|ref|YP_001574833.1| endopeptidase ClpB [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253731581|ref|ZP_04865746.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732668|ref|ZP_04866833.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
TCH130]
gi|262049325|ref|ZP_06022199.1| hypothetical protein SAD30_1623 [Staphylococcus aureus D30]
gi|262052146|ref|ZP_06024354.1| hypothetical protein SA930_1469 [Staphylococcus aureus 930918-3]
gi|282922254|ref|ZP_06329949.1| ATP-dependent chaperone ClpB [Staphylococcus aureus A9765]
gi|284023901|ref|ZP_06378299.1| chaperone clpB [Staphylococcus aureus subsp. aureus 132]
gi|294847963|ref|ZP_06788710.1| ATP-dependent chaperone ClpB [Staphylococcus aureus A9754]
gi|297208391|ref|ZP_06924821.1| chaperone protein ClpB [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|387780094|ref|YP_005754892.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus aureus subsp. aureus LGA251]
gi|415688044|ref|ZP_11451823.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
CGS01]
gi|417799504|ref|ZP_12446643.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21310]
gi|417898721|ref|ZP_12542639.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21259]
gi|417901914|ref|ZP_12545790.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21266]
gi|418283114|ref|ZP_12895871.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21202]
gi|418284667|ref|ZP_12897382.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21209]
gi|418315428|ref|ZP_12926891.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21340]
gi|418317865|ref|ZP_12929280.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21232]
gi|418321115|ref|ZP_12932466.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus VCU006]
gi|418560029|ref|ZP_13124553.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21252]
gi|418570627|ref|ZP_13134890.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21283]
gi|418578805|ref|ZP_13142900.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418598267|ref|ZP_13161777.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21343]
gi|418642870|ref|ZP_13205056.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-24]
gi|418648216|ref|ZP_13210262.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649359|ref|ZP_13211387.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-91]
gi|418657679|ref|ZP_13219441.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-105]
gi|418659446|ref|ZP_13221122.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-111]
gi|418874906|ref|ZP_13429169.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418903180|ref|ZP_13457221.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418905910|ref|ZP_13459937.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418911582|ref|ZP_13465565.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG547]
gi|418925143|ref|ZP_13479046.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928228|ref|ZP_13482114.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418933811|ref|ZP_13487635.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC128]
gi|419773659|ref|ZP_14299655.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CO-23]
gi|422743635|ref|ZP_16797619.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745794|ref|ZP_16799733.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|440708446|ref|ZP_20889110.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21282]
gi|440734426|ref|ZP_20914038.1| chaperone protein ClpB [Staphylococcus aureus subsp. aureus DSM
20231]
gi|448740571|ref|ZP_21722548.1| chaperone protein ClpB [Staphylococcus aureus KT/314250]
gi|81649655|sp|Q6GAV1.1|CLPB_STAAS RecName: Full=Chaperone protein ClpB
gi|81694855|sp|Q5HHB0.1|CLPB_STAAC RecName: Full=Chaperone protein ClpB
gi|49244194|emb|CAG42620.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57285852|gb|AAW37946.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus COL]
gi|87126055|gb|ABD20569.1| Chaperone clpB [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|150373857|dbj|BAF67117.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160367983|gb|ABX28954.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724580|gb|EES93309.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729446|gb|EES98175.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
TCH130]
gi|259159965|gb|EEW45001.1| hypothetical protein SA930_1469 [Staphylococcus aureus 930918-3]
gi|259162557|gb|EEW47125.1| hypothetical protein SAD30_1623 [Staphylococcus aureus D30]
gi|282593544|gb|EFB98538.1| ATP-dependent chaperone ClpB [Staphylococcus aureus A9765]
gi|294824763|gb|EFG41185.1| ATP-dependent chaperone ClpB [Staphylococcus aureus A9754]
gi|296887130|gb|EFH26033.1| chaperone protein ClpB [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|315197327|gb|EFU27665.1| S14 family endopeptidase ClpB [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141209|gb|EFW33056.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143266|gb|EFW35056.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|334273611|gb|EGL91953.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21310]
gi|341845753|gb|EGS86955.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21266]
gi|341847846|gb|EGS89017.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21259]
gi|344177196|emb|CCC87660.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus aureus subsp. aureus LGA251]
gi|365168711|gb|EHM60049.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21202]
gi|365172964|gb|EHM63621.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21209]
gi|365226073|gb|EHM67301.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus VCU006]
gi|365243617|gb|EHM84289.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21340]
gi|365244557|gb|EHM85214.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21232]
gi|371973077|gb|EHO90440.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21252]
gi|371983684|gb|EHP00825.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21283]
gi|374399624|gb|EHQ70760.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21343]
gi|375015983|gb|EHS09627.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-24]
gi|375027081|gb|EHS20457.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-88]
gi|375029509|gb|EHS22835.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-105]
gi|375029732|gb|EHS23057.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-91]
gi|375035599|gb|EHS28715.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus IS-111]
gi|377696832|gb|EHT21187.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377724960|gb|EHT49075.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG547]
gi|377738140|gb|EHT62149.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742195|gb|EHT66180.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377746438|gb|EHT70409.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377765210|gb|EHT89060.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377771146|gb|EHT94903.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377771591|gb|EHT95345.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383972555|gb|EID88591.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CO-23]
gi|436431454|gb|ELP28807.1| chaperone protein ClpB [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436504784|gb|ELP40753.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21282]
gi|445548765|gb|ELY17014.1| chaperone protein ClpB [Staphylococcus aureus KT/314250]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|398896328|ref|ZP_10647457.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
gi|398178588|gb|EJM66233.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
Length = 854
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ M+++
Sbjct: 506 IPDLERSLQMVDQ--HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 SLLHQRVIGQDEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLFDTEEA---MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILMD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFKNTVIVMTSNLGSVQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + S F+P + +D++V+ +
Sbjct: 736 RAAVMDAISSHFRPEFINRVDEVVIFE 762
>gi|418445565|ref|ZP_13017045.1| chaperone ClpB [Staphylococcus aureus subsp. aureus VRS8]
gi|387736551|gb|EIK23640.1| chaperone ClpB [Staphylococcus aureus subsp. aureus VRS8]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTNLNAYFKPEILNRMDDIVL 768
>gi|386830517|ref|YP_006237171.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|385195909|emb|CCG15520.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus aureus subsp. aureus HO 5096 0412]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|300114805|ref|YP_003761380.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
gi|299540742|gb|ADJ29059.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
Length = 865
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 189/413 (45%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D + +D+ +
Sbjct: 361 HGVEITDPAIVAAATLSH--RYITDRKLPDKAIDLIDEAASRIRMEIDSKPEPMDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-----LRQIDNELKD---------AFFELVSFVKLR 127
L + +E E L +E + S R L Q++ E D A +K +
Sbjct: 419 LIQLKIEREALRRETDEASKRRLETLETELNQLEKEYADLEEIWKAEKATLSGAQGIKEQ 478
Query: 128 MQVEYDDFVSCVHDAK-----------RVKDYSKILDQIDARVHGKFKE-KLAVDVEEIA 175
++ D S H A R+ + K LD A FK + V EEIA
Sbjct: 479 LEQARLDLESA-HRAGDLGRMSELQYGRIPELQKQLDAATAVEQHDFKLLRNKVSEEEIA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV SK TGIP S E+ ++++ L +RV GQ++AI V+ A+ + +A GL+
Sbjct: 538 EVVSKWTGIPVSKMLEGEREKLLKMEAALHQRVVGQDEAIAVVSNAIRRSRA---GLADP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R G FLF GP GK EL KA+A L+D + ++ DM + E S+ +
Sbjct: 595 NRPNGSFLFLGPTGVGKTELCKALAMFLFDTEEA---MVRIDMSEFMERHSVARLIGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGFEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGHGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+++MTS+L + E+ Y V E+ G F+P + +D +VV
Sbjct: 710 RNTVVVMTSNLGSHVIQEMAGEDRYQEMKSAVMEIVGQHFRPEFINRVDDVVV 762
>gi|262172214|ref|ZP_06039892.1| ClpB protein [Vibrio mimicus MB-451]
gi|449144154|ref|ZP_21774971.1| chaperone ClpB [Vibrio mimicus CAIM 602]
gi|261893290|gb|EEY39276.1| ClpB protein [Vibrio mimicus MB-451]
gi|449080254|gb|EMB51171.1| chaperone ClpB [Vibrio mimicus CAIM 602]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|229525361|ref|ZP_04414766.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
gi|229338942|gb|EEO03959.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|418993591|ref|ZP_13541228.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG290]
gi|377746750|gb|EHT70720.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG290]
Length = 864
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 533 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 591
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 592 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 647
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 648 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 705
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 706 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 763
>gi|418312560|ref|ZP_12924069.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21334]
gi|365238205|gb|EHM79042.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21334]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMINLNAYFKPEILNRMDDIVL 768
>gi|322831464|ref|YP_004211491.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
gi|321166665|gb|ADW72364.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 195/416 (46%), Gaps = 60/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF-----------ELVSFVKLR-MQ 129
+ + +E + L KE D S + L ++ EL E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASVKR--LEMLETELSQKEREYSELEEEWKAEKASLTGTQNIK 476
Query: 130 VEYDDFVSCVHDAKRVKD--------YSKILD---------QIDARVHGKFKEKLAVDVE 172
E + + A+RV D Y KI + Q D + + ++ DVE
Sbjct: 477 AELEQAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQADGKTMKLLRNRV-TDVE 535
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IA+V ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A GL
Sbjct: 536 -IADVLARWTGIPVARMLESEREKLLRMEEELHNRVIGQNEAVEAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL KA+A L++++D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKALATFLFNSDDA---MVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + + A+Y + V EV F+P + +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSDIIQQHFGEASYAQMKASVMEVVTHSFRPEFINRIDEVVV 762
>gi|422706934|ref|ZP_16764631.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0043]
gi|315155649|gb|EFT99665.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0043]
Length = 886
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|238785830|ref|ZP_04629799.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
gi|238713243|gb|EEQ05286.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 197/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E S + ++ E
Sbjct: 419 IIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLAVDVEE--IAE 176
+ + A+RV D Y KI + Q+ A + GK + L V E IA+
Sbjct: 479 LEQAKITLEQARRVGDLARMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEVEIAD 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP + ++ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVARMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A L+D++D ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALATFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYAEMKNMVMEVVSHHFRPEFINRIDEVVV 762
>gi|429887941|ref|ZP_19369446.1| ClpB protein [Vibrio cholerae PS15]
gi|429225109|gb|EKY31395.1| ClpB protein [Vibrio cholerae PS15]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|422719793|ref|ZP_16776416.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0017]
gi|315032832|gb|EFT44764.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0017]
Length = 898
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 563 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 622
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 623 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 677
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 678 RLVGAPPGYIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 735
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 736 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 795
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 796 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 848
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 849 ARPLKRFI 856
>gi|308048519|ref|YP_003912085.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
gi|307630709|gb|ADN75011.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 201/416 (48%), Gaps = 60/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK
Sbjct: 361 HSVEITDPAIVAAATLSH--RYLSERKLPDKAIDLIDEAASSIRLEIDSKPEPLDK---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSS--RSFWLRQIDNELKDAFFEL-------------VSF 123
L R +++ EQ + ++TD +S R L++ ++L+ F EL
Sbjct: 415 LERRIIQLKLEEQALSKETDEASHKRLELLKEQLSDLEQQFRELDEIWNTEKAALAGTQH 474
Query: 124 VKLRMQVEYDDFVSC--VHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVE 172
+K ++ D D R+ + Y +I + Q+D + +E K V
Sbjct: 475 IKAALEQARQDLEVARRASDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLKNRVTDA 534
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV +K TGIP + ++ +R++ L +RV GQ++A+D + A+ + +A GL
Sbjct: 535 EIAEVLAKATGIPVAKMLEGERDKLLRMEEALHRRVVGQDEAVDAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL+KA+A+ ++D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELSKALAHFMFDSADA---MVRIDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-VTGSL---FKPSLLKLLDKLVV 391
D NT+IIMTS+L +Q+ + Y + E V G L F+P L +D+ VV
Sbjct: 707 VDFRNTVIIMTSNLGSDQIQQHFGELAYPELKELVYGVLLQSFRPEFLNRVDETVV 762
>gi|374308432|ref|YP_005054863.1| ATP-dependent chaperone protein ClpB [Filifactor alocis ATCC 35896]
gi|291166758|gb|EFE28804.1| ATP-dependent chaperone protein ClpB [Filifactor alocis ATCC 35896]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 189/425 (44%), Gaps = 65/425 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H+L+I D A+ + ++ R L ++ ID++ + D +ELD +
Sbjct: 361 HKLRISDNAIIACATLSD--RYITDRFLPDKAIDLMDEASAMVRTELDSMPQELDDDRRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW------LRQIDNELKDAFFELVSFVK-LRMQVEYDD 134
+ + +E L KE TD S+ L ++ + F + K L Q E
Sbjct: 419 ILQLEIEKAALKKE-TDEGSKKRLEGLEEELANLNERYNEEFINWQNSKKSLEKQTEIKS 477
Query: 135 FVSCV----HDAKRVKDYSKILDQIDARVHGKFKE---KLA----------------VDV 171
+ V DA+R DY K + +GK +E +LA V
Sbjct: 478 AIELVKHQIEDAQRNYDYEKASE----LRYGKLQELEHELAENERKMSEEEDAAREEVTE 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
E+IAEV SK TGIP S E+ + + L KRV GQ DAI + EA+ + ++ K
Sbjct: 534 EQIAEVVSKWTGIPVSKLVETEREKILHLSDILSKRVIGQKDAITAVSEAIIRARSGLK- 592
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G F+F GP GK ELAK + ++D+ N ++ DM Y E S+
Sbjct: 593 -DENRPIGSFIFLGPTGVGKTELAKTLTESMFDDERN---MVRIDMSEYMEKYSVSRLIG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
S L V+++PYSVVLFD+IEKA+ I N+LL++L D R
Sbjct: 649 SAPGYIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDIFNILLQVL--DDGRLTDNQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+IIMTS+L + + + ++ + V + F+P L +D+++
Sbjct: 707 VDFKNTIIIMTSNLGSQAILDGIDDDGMLKESVRESVEDKLHHTFRPEFLNRIDEII--- 763
Query: 394 LAVPL 398
L PL
Sbjct: 764 LFTPL 768
>gi|164688260|ref|ZP_02212288.1| hypothetical protein CLOBAR_01905 [Clostridium bartlettii DSM
16795]
gi|164602673|gb|EDQ96138.1| ATP-dependent chaperone protein ClpB [Clostridium bartlettii DSM
16795]
Length = 864
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 196/418 (46%), Gaps = 63/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R L ++ ID++ + + D ELD +
Sbjct: 366 HGIRIHDNAIVAAAKLSD--RYITDRFLPDKAIDLIDEAGAMIRSEIDSLPTELDIVRRK 423
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW--------LRQIDNELKDAF-FELVSFVKLR-MQVE 131
L E E L+ E+ + S + L+ D+E+ + E +++R ++ +
Sbjct: 424 LFTLETEREALLTEEDEKSKKRLEVLEKELAELKSKDDEMTAKYEKEKNQILQVRNLKAQ 483
Query: 132 YDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKEKLA-----------VDVEE 173
DD V +R D++K+ + +++A++ +++EK++ V E
Sbjct: 484 LDDLKGQVEKYEREYDFNKVAEIKYGEIPKLEAQIK-EYEEKISSGYDTALLKEEVTENE 542
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
I+E+ SK TGIP + E+ ++++ L +RV GQN+A+ + A+ + +A K
Sbjct: 543 ISEIVSKWTGIPVTKLVEGEREKLLKLEDELHERVIGQNEAVTAVSNAVIRARAGLK--D 600
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
+ +G F+F GP GK ELAK +A L+D+ +N +I DM Y E S+
Sbjct: 601 ENKPIGSFIFLGPTGVGKTELAKTLARSLFDSEEN---IIRIDMSEYMEKHSVSRLVGPP 657
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++ PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 658 PGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQIL--DDGRLTDNKGNTVD 715
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDKLVV 391
NT+IIMTS++ L G++ E T L FKP L +D +++
Sbjct: 716 FKNTIIIMTSNIGSS-----YLLQDQGKITEETKGLVMGEMKRRFKPEFLNRVDDIIM 768
>gi|147675005|ref|YP_001216203.1| clpB protein [Vibrio cholerae O395]
gi|227117086|ref|YP_002818982.1| clpB protein [Vibrio cholerae O395]
gi|262170007|ref|ZP_06037697.1| ClpB protein [Vibrio cholerae RC27]
gi|146316888|gb|ABQ21427.1| clpB protein [Vibrio cholerae O395]
gi|227012536|gb|ACP08746.1| clpB protein [Vibrio cholerae O395]
gi|262021741|gb|EEY40452.1| ClpB protein [Vibrio cholerae RC27]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|365847002|ref|ZP_09387499.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
43003]
gi|364573153|gb|EHM50666.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
43003]
Length = 861
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D +ELD+
Sbjct: 365 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 418
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K+++D +SR L ++ EL D E S +
Sbjct: 419 LDRRIIQLKLEQQALKKESDEASRK-RLDMLNEELDDKERQYSVLEEEWKAEKASLSGTQ 477
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFK-----EKLAVD 170
++ E + + A+RV D Y KI + Q+ + + K D
Sbjct: 478 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLASATQSEGKTMRLLRNRVTD 537
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
VE IA+V ++ TGIP + ++ +R++ L +RV GQN+A++ + A+ + +A
Sbjct: 538 VE-IADVLARWTGIPVARMMESERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRA--- 593
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 594 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRL 650
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 708
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 709 RTVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLVLGVVSHSFRPEFINRIDEVVV 766
>gi|49483136|ref|YP_040360.1| ATPase of an ATP-dependent protease [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257427689|ref|ZP_05604088.1| chaperone protein clpB [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430324|ref|ZP_05606707.1| chaperone clpB [Staphylococcus aureus subsp. aureus 68-397]
gi|257433021|ref|ZP_05609381.1| chaperone clpB [Staphylococcus aureus subsp. aureus E1410]
gi|257435925|ref|ZP_05611973.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
M876]
gi|282903512|ref|ZP_06311403.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus C160]
gi|282905290|ref|ZP_06313147.1| chaperone protein clpB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908269|ref|ZP_06316100.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910550|ref|ZP_06318354.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913748|ref|ZP_06321536.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus M899]
gi|282918672|ref|ZP_06326409.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
C427]
gi|282923725|ref|ZP_06331403.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
C101]
gi|283957712|ref|ZP_06375165.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293500788|ref|ZP_06666639.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
58-424]
gi|293509741|ref|ZP_06668451.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
M809]
gi|293526327|ref|ZP_06671013.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus M1015]
gi|295427458|ref|ZP_06820092.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|417889292|ref|ZP_12533385.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21195]
gi|418565672|ref|ZP_13130068.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21264]
gi|418581606|ref|ZP_13145686.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418596788|ref|ZP_13160337.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21342]
gi|418603063|ref|ZP_13166455.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21345]
gi|418891522|ref|ZP_13445639.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418897296|ref|ZP_13451369.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901688|ref|ZP_13455737.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418908674|ref|ZP_13462682.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG149]
gi|418916760|ref|ZP_13470720.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418922548|ref|ZP_13476465.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418981798|ref|ZP_13529512.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418983851|ref|ZP_13531549.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1500]
gi|81651440|sp|Q6GIB2.1|CLPB_STAAR RecName: Full=Chaperone protein ClpB
gi|49241265|emb|CAG39944.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus aureus subsp. aureus MRSA252]
gi|257275882|gb|EEV07355.1| chaperone protein clpB [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279101|gb|EEV09712.1| chaperone clpB [Staphylococcus aureus subsp. aureus 68-397]
gi|257282436|gb|EEV12571.1| chaperone clpB [Staphylococcus aureus subsp. aureus E1410]
gi|257285116|gb|EEV15235.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
M876]
gi|282314112|gb|EFB44503.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
C101]
gi|282317806|gb|EFB48178.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
C427]
gi|282322360|gb|EFB52683.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus M899]
gi|282325942|gb|EFB56250.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327934|gb|EFB58216.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331697|gb|EFB61209.1| chaperone protein clpB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596467|gb|EFC01428.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus C160]
gi|283791163|gb|EFC29978.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920869|gb|EFD97931.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Staphylococcus aureus subsp. aureus M1015]
gi|291095793|gb|EFE26054.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
58-424]
gi|291467416|gb|EFF09932.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
M809]
gi|295128594|gb|EFG58226.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|341851885|gb|EGS92788.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21195]
gi|371972769|gb|EHO90140.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21264]
gi|374393957|gb|EHQ65257.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21345]
gi|374396658|gb|EHQ67888.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21342]
gi|377700638|gb|EHT24974.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377706397|gb|EHT30694.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377710285|gb|EHT34526.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377711156|gb|EHT35389.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377732479|gb|EHT56530.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377735871|gb|EHT59901.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377750912|gb|EHT74848.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377756013|gb|EHT79911.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIG149]
gi|377762075|gb|EHT85944.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|256961339|ref|ZP_05565510.1| AAA ATPase [Enterococcus faecalis Merz96]
gi|293383626|ref|ZP_06629535.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R712]
gi|293387262|ref|ZP_06631819.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis S613]
gi|312906175|ref|ZP_07765187.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
512]
gi|312909520|ref|ZP_07768375.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
516]
gi|256951835|gb|EEU68467.1| AAA ATPase [Enterococcus faecalis Merz96]
gi|291078962|gb|EFE16326.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R712]
gi|291083299|gb|EFE20262.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis S613]
gi|310627821|gb|EFQ11104.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
512]
gi|311290193|gb|EFQ68749.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
516]
Length = 868
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGRVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|448744875|ref|ZP_21726755.1| ClpB chaperone-like protein [Staphylococcus aureus KT/Y21]
gi|445561844|gb|ELY18032.1| ClpB chaperone-like protein [Staphylococcus aureus KT/Y21]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKTVMTNLNAYFKPEILNRMDDIVL 768
>gi|82702670|ref|YP_412236.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
25196]
gi|82410735|gb|ABB74844.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
25196]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S E+ + ++ +L +RV GQ++A+ ++ +A+ + +A
Sbjct: 537 VGAEEIAEVVSRATGIPVSKMMQGEREKLLHMEEKLHERVVGQDEAVRLVSDAIRRSRA- 595
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL+ R G FLF GP GK EL +A+A L+ D++ H+I DM + E S+
Sbjct: 596 --GLADPNRPYGSFLFLGPTGVGKTELCRALAGFLF---DSEEHMIRIDMSEFMEKHSVA 650
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PY+V+L D++EKA+ + N+LL++L D R
Sbjct: 651 RLIGAPPGYVGYEEGGYLTEAVRRKPYAVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 708
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A G V + F+P + +D+
Sbjct: 709 QGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQVIKLAVMGEVK----AYFRPEFINRIDE 764
Query: 389 LVV 391
+VV
Sbjct: 765 VVV 767
>gi|341614681|ref|ZP_08701550.1| ATP-dependent Clp protease [Citromicrobium sp. JLT1363]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 66/418 (15%)
Query: 22 HRLQIQDEALFLASRIA-QHPRNKATGELRERFIDILLKGIKRC---LNSRDKYQKELDK 77
H ++I D A+ A++++ ++ +N+ + ++ ID++ + R + S+ + + LD+
Sbjct: 364 HGVRITDGAIVAAAQLSNRYIQNRF---MPDKAIDLMDEAASRIRMEVESKPEEIENLDR 420
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFW-LRQIDNELKDAFFELVS---------FVKLR 127
L+ +E + L KE D S++ LR+ L+ EL + + R
Sbjct: 421 RIIQLK---IEEQALAKESDDASAQRLEDLREDLANLEQRSAELTTRWQGERDKIHAESR 477
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILDQIDARV---HGKFKE----------KLAVDVEEI 174
++ E D + A+R D +K + R+ K KE + V E+I
Sbjct: 478 LKEELDQARIELEQAQRAGDLAKAGELQYGRIPELENKLKEAEGHTSNALLREEVTEEDI 537
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSS 234
A V ++ TGIP ++ +R++ L KRV GQ DA++ + +A+ + +A K
Sbjct: 538 AGVVARWTGIPVDRMLEGERDKLLRMEEALGKRVIGQKDAVEAVSKAVRRARAGLK--DP 595
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R LG FLF GP GK EL KA+A L+ D+DN ++ DM + E ++ +
Sbjct: 596 GRPLGSFLFLGPTGVGKTELTKALAQFLF---DDDNAMVRIDMSEFMEKHAVARLIGAPP 652
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPY VVLFD++EKA+S + N+LL++L D R D
Sbjct: 653 GYVGYEEGGVLTESVRRRPYQVVLFDEVEKAHSDVFNVLLQVL--DDGRLTDGQGRVVDF 710
Query: 343 TNTLIIMTSDLK---------DEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
+NTLII+TS+L D+QV +V +V +V F+P L LD++++
Sbjct: 711 SNTLIILTSNLGSQYLSNMSDDQQVSDV-----EPQVMDVVRGHFRPEFLNRLDEIIL 763
>gi|88770803|gb|ABD52004.1| ClpB [Methanohalophilus portucalensis FDF-1]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 26/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IA V S+ T IP + + + ++ RL +RV GQN+A+ + +A+ + +A
Sbjct: 535 VDEEDIAHVVSEWTRIPVTKLMEGERGKLVHLEDRLHERVIGQNEAVKAVSDAVIRAQAG 594
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K RR +G F+F GP GK ELAKA+A EL+D+ D H+I DM Y E ++
Sbjct: 595 IK--DPRRPIGSFIFLGPTGVGKTELAKALATELFDSED---HMIRVDMSEYMEKHTVAR 649
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++ PYSVVLFD+IEKA+ + N++L++L D R
Sbjct: 650 LIGAPLGYIGHDEGGQLTEAVRRNPYSVVLFDEIEKAHHDVFNIMLQLL--DDGRLTDSK 707
Query: 337 IAAFDLTNTLIIMTSDL-KDEQVYEVMLTATYGR-----VNEVTGSLFKPSLLKLLDKLV 390
D NT++IMTS++ D + ++ Y + +NE+T F+P L +D++
Sbjct: 708 GRTVDFKNTIVIMTSNICVDYAISKLEEGVAYSKMQETAMNELTKH-FRPEFLNRIDEIA 766
Query: 391 V 391
+
Sbjct: 767 I 767
>gi|398913136|ref|ZP_10656309.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
gi|398181097|gb|EJM68668.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
Length = 854
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ M+++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLMKME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L +RV GQ++A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 SLLHQRVIGQDEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLFDTEEA---MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+ + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHPDVFNILLQVLE-DGRLTDSHG-RTVDFKNTVIVMTSNLGSVQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + S F+P + +D++V+ +
Sbjct: 736 RAAVMDAISSHFRPEFINRVDEVVIFE 762
>gi|302337451|ref|YP_003802657.1| ATP-dependent chaperone ClpB [Spirochaeta smaragdinae DSM 11293]
gi|301634636|gb|ADK80063.1| ATP-dependent chaperone ClpB [Spirochaeta smaragdinae DSM 11293]
Length = 864
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 68/420 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+DEAL A+ ++ R + L ++ ID++ + R + ELDK +
Sbjct: 361 HGVRIKDEALIAAATLSD--RYITSRFLPDKAIDLVDEAASRLKMEIESQPIELDKIERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELVSFVK 125
+ + +E + LV+ED D +S+ L ++D EL D + + +K
Sbjct: 419 ILQLNIERQALVRED-DEASKE-RLEKLDRELADLKSGRDAMRLQWNNEKKVIDGIRELK 476
Query: 126 LRMQVEYDDFVSCVHD-----AKRVK--DYSKILDQID------ARVHGK---FKEKLAV 169
R++ D V D A +K +I QI+ A++ G+ +E+ V
Sbjct: 477 SRLEQYKSDEVRFERDGNLTGAAEIKHGKIPEIKHQIEEKSAELAKMQGQSALLREE--V 534
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
E+IAEV S TGIP S +Y++++ L+KRV GQ +AI + +A+ + K
Sbjct: 535 TEEDIAEVVSTWTGIPVSKMLASEMAKYLQLESTLEKRVVGQKEAIRAVSDAIRR---NK 591
Query: 230 KGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R LG F+F GP GK ELA+ +A+ L+ D++ L DM Y E ++
Sbjct: 592 TGLSDEARPLGSFIFIGPTGVGKTELARTLADFLF---DDERALTRIDMSEYMEKHAVSR 648
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYSVVLFD+IEKA+ + N++L++L D R
Sbjct: 649 LIGAPPGYVGYDQGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNIMLQLL--DDGRLTDGQ 706
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYG-----RVNEVTGSLFKPSLLKLLDKLVV 391
D N +IIMTS++ +++L A G +V+++ + FKP L +D+++
Sbjct: 707 GRLVDFRNAIIIMTSNIGS----DLILQAADGDEINEKVHQLMRATFKPEFLNRVDEIIT 762
>gi|268598720|ref|ZP_06132887.1| ClpB protein [Neisseria gonorrhoeae MS11]
gi|268582851|gb|EEZ47527.1| ClpB protein [Neisseria gonorrhoeae MS11]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQN+A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++P+SV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|254230259|ref|ZP_04923650.1| chaperone ClpB [Vibrio sp. Ex25]
gi|262395161|ref|YP_003287015.1| ClpB protein [Vibrio sp. Ex25]
gi|451977393|ref|ZP_21927478.1| chaperone ClpB [Vibrio alginolyticus E0666]
gi|151937239|gb|EDN56106.1| chaperone ClpB [Vibrio sp. Ex25]
gi|262338755|gb|ACY52550.1| ClpB protein [Vibrio sp. Ex25]
gi|451929725|gb|EMD77457.1| chaperone ClpB [Vibrio alginolyticus E0666]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQ++A+ V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +A+ ++D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDA---MVRIDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E T Y V +V F+P L +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFLNRVDEIVV 762
>gi|421563669|ref|ZP_16009485.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2795]
gi|421564898|ref|ZP_16010685.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3081]
gi|421907229|ref|ZP_16337113.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
meningitidis alpha704]
gi|433507471|ref|ZP_20464376.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
gi|393291645|emb|CCI73100.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
meningitidis alpha704]
gi|402340154|gb|EJU75357.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM2795]
gi|402345503|gb|EJU80619.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
NM3081]
gi|432240488|gb|ELK96023.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|87303275|ref|ZP_01086068.1| ATPase [Synechococcus sp. WH 5701]
gi|87282170|gb|EAQ74131.1| ATPase [Synechococcus sp. WH 5701]
Length = 875
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 130/238 (54%), Gaps = 26/238 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
++IAEV +K TGIP S E+ + ++ L RV GQ+ A+ + +A+ + +A G
Sbjct: 538 DDIAEVIAKWTGIPVSRLVQSEMEKLLHLEDELHTRVIGQSQAVTAVADAIQRSRA---G 594
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R + FLF GP GK EL+KA+A++L+D++D ++ DM Y E ++
Sbjct: 595 LSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSDDA---MVRIDMSEYMEKHAVSRLI 651
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPY+V+LFD++EKA+ + N++L+IL D R
Sbjct: 652 GAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQIL--DDGRVTDGQGR 709
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVML-TATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D TNT++I+TS++ + ++ A +G RVNE + F+P L LD+ ++
Sbjct: 710 TVDFTNTVLILTSNIGSSSILDLAGDPARHGEMEKRVNEALRAHFRPEFLNRLDETII 767
>gi|254493514|ref|ZP_05106685.1| ClpB protein [Neisseria gonorrhoeae 1291]
gi|226512554|gb|EEH61899.1| ClpB protein [Neisseria gonorrhoeae 1291]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQN+A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++P+SV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QDRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|418562140|ref|ZP_13126602.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21262]
gi|371974338|gb|EHO91672.1| ATP-dependent chaperone protein ClpB [Staphylococcus aureus subsp.
aureus 21262]
Length = 869
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQVLLENV--KETGEITEPTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|197335143|ref|YP_002155324.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
gi|423685282|ref|ZP_17660090.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
gi|197316633|gb|ACH66080.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
gi|371495783|gb|EHN71378.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
Length = 861
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 195/413 (47%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK
Sbjct: 361 HHVEITDPAIVAAASLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSR---SFWLRQIDNELKDAFFELV--------SFVKLRMQV 130
+ + +E + LVKE D S + S L + E + A E V S + ++
Sbjct: 419 IIQLKIEQQALVKESDDASLKRLDSLNLELMQKEREYAELEEVWKAEKAALSGTQ-HIKT 477
Query: 131 EYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDVEEIA 175
E + S + A+R D Y +I + Q+D + +E K V EIA
Sbjct: 478 ELETARSNMEIARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMSLLKNKVTDAEIA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
EV S+ TGIP + ++ ++++ L RV GQ +A++ + A+ + +A GLS
Sbjct: 538 EVLSRQTGIPVNKMLEGERDKLLKMEEVLHHRVIGQAEAVEAVSNAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL K++AN ++D+ D ++ DM + E S+ +
Sbjct: 595 NRPIGSFLFLGPTGVGKTELCKSLANFMFDSED---AMVRIDMSEFMEKHSVARLVGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L E++ + YG + E V F+P L +D+ VV
Sbjct: 710 KNTVIIMTSNLGSEKIQQHFGELNYGGIKEIVMDVVSQHFRPEFLNRVDETVV 762
>gi|161870340|ref|YP_001599510.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
meningitidis 053442]
gi|161595893|gb|ABX73553.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
meningitidis 053442]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|373468011|ref|ZP_09559297.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
851 str. F0397]
gi|371757049|gb|EHO45848.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
851 str. F0397]
Length = 856
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 192/413 (46%), Gaps = 55/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMENELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E + V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKEESYSEMKALVMSVVSQHFRPEFINRIDETVV 761
>gi|422111082|ref|ZP_16380853.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378342|emb|CBX23039.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 199/416 (47%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSD--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMEKMHVAKESDDASKKRLEL--IDEEIDGLQKEYADLDEIWKAEKAASSSTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKI-------LDQIDARVH-------GKFKEKL---AVDVE 172
+ DD + AKR D+++ L ++ A++ GK + KL V +
Sbjct: 477 KQMDDIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGAD 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
E+AE+ S++TGIP + ++ ++++ L +RV GQ++A+ + +A+ + ++ GL
Sbjct: 537 EVAEIVSRMTGIPVAKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---SRSGL 593
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 594 ADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVARLIG 650
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 651 APPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 708
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M Y V EV F+P ++ +D++VV
Sbjct: 709 VDFKNTVIVMTSNIGSQHIQQ-MGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|91227643|ref|ZP_01261920.1| ClpB protein [Vibrio alginolyticus 12G01]
gi|269966581|ref|ZP_06180662.1| clpB protein [Vibrio alginolyticus 40B]
gi|91188422|gb|EAS74716.1| ClpB protein [Vibrio alginolyticus 12G01]
gi|269828766|gb|EEZ83019.1| clpB protein [Vibrio alginolyticus 40B]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L RV GQ++A+ V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +A+ ++D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDA---MVRIDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E T Y V +V F+P L +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFLNRVDEIVV 762
>gi|424635723|ref|ZP_18073744.1| ATPase associated with various cellular activities family protein
[Vibrio cholerae HC-55A1]
gi|408026977|gb|EKG63966.1| ATPase associated with various cellular activities family protein
[Vibrio cholerae HC-55A1]
Length = 472
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 150 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 206
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 207 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 263
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L ++++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 264 APPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 321
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 322 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 377
>gi|421551086|ref|ZP_15997086.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
gi|433471850|ref|ZP_20429233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
gi|433477915|ref|ZP_20435233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
gi|433522194|ref|ZP_20478881.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
gi|433526339|ref|ZP_20482969.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
gi|433539247|ref|ZP_20495722.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
gi|402328620|gb|EJU63987.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
gi|432207807|gb|ELK63795.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
gi|432214731|gb|ELK70627.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
gi|432258572|gb|ELL13854.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
gi|432261103|gb|ELL16360.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
gi|432272970|gb|ELL28072.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|254674233|emb|CBA10017.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
alpha275]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|163815341|ref|ZP_02206716.1| hypothetical protein COPEUT_01505 [Coprococcus eutactus ATCC 27759]
gi|158449315|gb|EDP26310.1| ATP-dependent chaperone protein ClpB [Coprococcus eutactus ATCC
27759]
Length = 858
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 22/238 (9%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +EI+++ SK TGIP + + + + + LKKRV GQ++A+D + +A+ + KA
Sbjct: 531 VSEDEISKIVSKWTGIPVAKLTESEKSKTLNLASELKKRVVGQDEAVDYVSDAIIRSKAG 590
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K S + +G F+F GP GK ELAK++A L+DN N ++ DM Y E S+
Sbjct: 591 IKDPS--KPIGSFIFLGPTGVGKTELAKSLAAALFDNEQN---MVRIDMSEYMEKHSVSR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVL--DDGRITDSQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
D NT+IIMTS++ + T N+V L F+P L +D+++
Sbjct: 704 GRTVDFKNTIIIMTSNIGGADIAAAGGEITDELKNDVMAQLKSRFRPEFLNRIDEIIT 761
>gi|343506630|ref|ZP_08744105.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
700023]
gi|342802147|gb|EGU37589.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
700023]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 197/415 (47%), Gaps = 58/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDA---FFEL-------------VSFVK 125
+ + +E + L+ E + S + L ++NEL++ F EL +K
Sbjct: 419 IIQLKIEQQALINEHDEASEK--RLEMLNNELQEKERDFAELDEVWNAEKAALSGTQHIK 476
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKEKL-----AVDVEE 173
+ Q D +F D R+ + Y +I + Q+D + +E DVE
Sbjct: 477 SELEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDVE- 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V SK TGIP + +E+ +R++ L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 536 IADVLSKQTGIPVAKMLEAEKEKLLRMEQVLHKRVIGQKEAVEVVSNAIRRSRA---GLS 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
+ +G FLF GP GK EL K +A ++D+ D ++ DM + E S+ +
Sbjct: 593 DPNKPIGSFLFLGPTGVGKTELCKTLATFMFDSEDA---MVRIDMSEFMEKHSVARLVGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E T Y V EV F+P L +D+ VV
Sbjct: 708 DFRNTVVIMTSNLGSARIQENFNTLDYQGIKHEVMEVVNKHFRPEFLNRVDESVV 762
>gi|291519801|emb|CBK75022.1| ATP-dependent chaperone ClpB [Butyrivibrio fibrisolvens 16/4]
Length = 860
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 28/243 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +EIA + S+ TGIP + + + + L KRV GQ+DA+ ++ EA+ + KA
Sbjct: 532 VSEDEIARIISRWTGIPVAKLNESERSKTLHLDEELHKRVMGQDDAVKLVSEAIIRSKAG 591
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K + +G FLF GP GK ELAK +A L+ D++N ++ DM Y E S+
Sbjct: 592 IK--DPTKPIGSFLFLGPTGVGKTELAKTLAQALF---DDENAMVRLDMSEYMEKFSVSR 646
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL--DDGRITDSQ 704
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL--------FKPSLLKLLDK 388
D NT+IIMTS+L + + E + AT G + + T + F+P L LD+
Sbjct: 705 GRTVDFKNTIIIMTSNLGSQYLLEGIDEAT-GEITDATNEMVMSELRNSFRPEFLNRLDE 763
Query: 389 LVV 391
+++
Sbjct: 764 IIM 766
>gi|266619401|ref|ZP_06112336.1| ATP-dependent chaperone protein ClpB [Clostridium hathewayi DSM
13479]
gi|288869078|gb|EFD01377.1| ATP-dependent chaperone protein ClpB [Clostridium hathewayi DSM
13479]
Length = 862
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 27/239 (11%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
+EIA++ SK TGIP + + + + L KRV GQN+A++ + EA+ + KA K
Sbjct: 534 DEIAKIVSKWTGIPVAKLTESERNKTLHLDEELHKRVIGQNEAVEKVTEAIIRSKAGIK- 592
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ +G FLF GP GK ELAKA+A L+ D++N+++ DM Y E S+
Sbjct: 593 -DPTKPIGSFLFLGPTGVGKTELAKALAERLF---DDENNIVRIDMSEYMEKHSVSRLIG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL--DDGRITDSTGKT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYE-------VMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + + + A +N++ G F+P L LD++++
Sbjct: 707 VDFKNTIIIMTSNIGSQYLLDGIDETGSITPEAEAMVMNDLRGH-FRPEFLNRLDEIIL 764
>gi|428299923|ref|YP_007138229.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
gi|428236467|gb|AFZ02257.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
Length = 889
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 32/240 (13%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAE+ +K TGIP + ++ ++++ L +RV GQ +A++ + A+ + +A K
Sbjct: 544 DIAEIVAKWTGIPVNRLLESERQKLLQLESHLHQRVIGQQEALEAVSAAIRRARAGMK-- 601
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R +G F+F GP GK ELA+A+A L+D D LI DM Y E S+ +
Sbjct: 602 DPNRPIGSFMFMGPTGVGKTELARALAQFLFDAED---ALIRLDMSEYMEKHSVSRLVGA 658
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L+ V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 659 PPGYVGYEEGGQLSETVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRITDSQGRTV 716
Query: 341 DLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ DE YE M T RV + S F+P L +D L++
Sbjct: 717 DFQNTVIVMTSNIGSEHILDVSSDESQYEKMRT----RVMDALRSHFRPEFLNRVDDLII 772
>gi|386728656|ref|YP_006195039.1| hypothetical protein ST398NM01_0974 [Staphylococcus aureus subsp.
aureus 71193]
gi|418978781|ref|ZP_13526581.1| Clpb [Staphylococcus aureus subsp. aureus DR10]
gi|379993605|gb|EIA15051.1| Clpb [Staphylococcus aureus subsp. aureus DR10]
gi|384229949|gb|AFH69196.1| hypothetical protein ST398NM01_0974 [Staphylococcus aureus subsp.
aureus 71193]
Length = 722
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 391 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 449
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 450 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 505
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 506 APPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 563
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 564 VDFKNTIIIMTSNIGSQVLLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 621
>gi|433650994|ref|YP_007295996.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
gi|433300771|gb|AGB26591.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
Length = 874
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 203/438 (46%), Gaps = 72/438 (16%)
Query: 18 LEKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDK 77
LE H ++IQD AL A+ ++ R L ++ ID++ +G R D ELD+
Sbjct: 362 LEVFHGVKIQDAALVAAATLSH--RYITDRFLPDKAIDLVDEGCARLRTEIDSMPAELDE 419
Query: 78 HKYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFE--------------LVSF 123
+ R +E L KE TD +S+S L ++ EL D E +
Sbjct: 420 ITRRVTRLEIEEAALAKE-TDPASKS-RLEELRKELADLRAEADARHAQWDAERQAIRRV 477
Query: 124 VKLRMQVEYDDFVSCVHDAK-----------------RVKDYSKILDQIDARVHGKFKEK 166
+LR Q+E HDA+ ++ + + L + ++ K EK
Sbjct: 478 QELRGQLE-----QLRHDAEEAERNYDLNRAAELRYGQITELERKLQAAEEQLRSKQGEK 532
Query: 167 L----AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
V +EIAE+ + TGIP + E+ +R+ L +RV GQ++A+ ++ +A+
Sbjct: 533 PLLREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLRLDEILHERVIGQDEAVQLVSDAV 592
Query: 223 TKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ ++ + RR +G F+F GP GK ELAK +A L+D+ DN ++ DM Y E
Sbjct: 593 IRARSGIR--DPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEDN---MVRLDMSEYQE 647
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
++ + L V+++PYSVVL D+IEKA++ + N LL++L D
Sbjct: 648 RHTVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHADVFNTLLQVL--DDG 705
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVY-------EVMLTATYGRVNEVTGSLFKPSLL 383
R D NT++IMTS++ + E+ A + E+ G F+P L
Sbjct: 706 RLTDAQGRQVDFRNTVVIMTSNIGSHHLLDGVTADGEIKPDARDRVMAELRGH-FRPEFL 764
Query: 384 KLLDKLVV-IDLAVPLLD 400
+D +V+ L++P ++
Sbjct: 765 NRVDDIVLFTPLSMPQIE 782
>gi|375264537|ref|YP_005021980.1| ClpB protein [Vibrio sp. EJY3]
gi|369839861|gb|AEX21005.1| ClpB protein [Vibrio sp. EJY3]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L +RV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y V EV F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFAILDYQGIKNEVMEVVSKHFRPEFLNRVDETVV 762
>gi|417841857|ref|ZP_12487955.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
gi|341948231|gb|EGT74862.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
Length = 856
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 34/241 (14%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA++ I N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADIFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT++IMTS+L KDE E+ V V F+P + +D+ V
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETV 760
Query: 391 V 391
V
Sbjct: 761 V 761
>gi|317154035|ref|YP_004122083.1| ATP-dependent chaperone ClpB [Desulfovibrio aespoeensis Aspo-2]
gi|316944286|gb|ADU63337.1| ATP-dependent chaperone ClpB [Desulfovibrio aespoeensis Aspo-2]
Length = 865
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 199/417 (47%), Gaps = 58/417 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + D ELDK
Sbjct: 366 HGVRISDGAVVEAAVLSN--RYITDRQLPDKAIDLIDEAAALIRTEIDSQPYELDKANRH 423
Query: 82 LRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKDAFFELVS--------FVKLR-MQV 130
+ + +E E L K +TD +S R L + ELK+ L++ +LR ++
Sbjct: 424 IMQLEIEREAL-KRETDKASHERLGKLEKDLAELKERQSALLAQWENEKSGIERLRSLKG 482
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA------------------VDVE 172
+ + + +AKR+ DY++ +++ +++LA V +
Sbjct: 483 DIESTRRGIEEAKRIHDYNRAA-ELEYGTLATLEKELAQRNEALESGDIPRMVKEVVGPD 541
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
++A+V ++ TGIP S E+ +R+ L RV GQ++A+ + +A+ + +A K
Sbjct: 542 DVAQVIARWTGIPVSRLLEGEREKLLRLPEVLHGRVIGQDEAVQAVADAVLRARAGLKDP 601
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
S R +G F+F GP GK EL K +A+ L+D+ DN ++ DM Y E ++ +
Sbjct: 602 S--RPIGSFIFLGPTGVGKTELCKTLASALFDSEDN---MVRIDMSEYMEKHTVARLIGA 656
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V++RPYSVVLFD+IEKA+ + N+LL+IL D R
Sbjct: 657 PPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHHDVFNVLLQIL--DDGRLTDSHGRTV 714
Query: 341 DLTNTLIIMTSDLKDEQVYEVM------LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L E + + + G+V EV F+P L +D+ V+
Sbjct: 715 DFKNTIVIMTSNLGAEYMLDGIDEHGEFREGVTGQVMEVLRRHFRPEFLNRVDETVL 771
>gi|268684092|ref|ZP_06150954.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
gi|268624376|gb|EEZ56776.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQN+A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++P+SV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|416169730|ref|ZP_11608208.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
gi|325130543|gb|EGC53296.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|269215020|ref|ZP_06158987.1| chaperone protein ClpB [Neisseria lactamica ATCC 23970]
gi|269208504|gb|EEZ74959.1| chaperone protein ClpB [Neisseria lactamica ATCC 23970]
Length = 419
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 95 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 151
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 152 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 208
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 209 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 266
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 267 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 325
>gi|190575587|ref|YP_001973432.1| heat shock chaperone ClpB [Stenotrophomonas maltophilia K279a]
gi|190013509|emb|CAQ47144.1| putative heat shock chaperone ClpB [Stenotrophomonas maltophilia
K279a]
Length = 861
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 414
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 415 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDGLEREFSDLNEIWKSEKAALQGAT 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 474 KIKEQVEQAKL--ELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 532 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 590 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 704 GRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVMG----VVQAHFRPEFINR 759
Query: 386 LDKLVV 391
LD +VV
Sbjct: 760 LDDIVV 765
>gi|394988952|ref|ZP_10381787.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
gi|393792331|dbj|GAB71426.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
Length = 870
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 128/243 (52%), Gaps = 32/243 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ + ++ +L +RV GQ++A+ ++ +A+ + +A
Sbjct: 533 VGAEEIAEVVSRATGIPVSKMMEGERDKLLHMEDQLHQRVVGQDEAVRLVSDAIRRSRA- 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GL R G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 592 --GLGDPNRPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMERHSVA 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 647 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVL--DDGRMTDG 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQV-------YEVMLTATYGRVNEVTGSLFKPSLLKLLDK 388
D NT+I+MTS+L + + Y+V+ A V S F+P + +D+
Sbjct: 705 QGRTVDFKNTVIVMTSNLGSQMIQQMEGDDYQVVKLAVMAEVK----SYFRPEFINRIDE 760
Query: 389 LVV 391
+VV
Sbjct: 761 VVV 763
>gi|332160283|ref|YP_004296860.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664513|gb|ADZ41157.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 197/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E + + ++ E
Sbjct: 419 IIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLA--VDVEEIAE 176
+ + A+RV D Y KI + Q+ A + GK + L V EIAE
Sbjct: 479 LEQAKISLEQARRVGDLGRMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEAEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP S ++ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A L+ D+D+ ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALATFLF---DSDDAMVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTRHFRPEFINRIDEVVV 762
>gi|385341628|ref|YP_005895499.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
gi|385857525|ref|YP_005904037.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
gi|416187148|ref|ZP_11614127.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
gi|325136561|gb|EGC59163.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
gi|325201834|gb|ADY97288.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
gi|325208414|gb|ADZ03866.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|386309637|ref|YP_006005693.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243771|ref|ZP_12870225.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433551271|ref|ZP_20507314.1| ClpB protein [Yersinia enterocolitica IP 10393]
gi|318604489|emb|CBY25987.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|330863598|emb|CBX73708.1| chaperone protein clpB [Yersinia enterocolitica W22703]
gi|351776724|gb|EHB19022.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788370|emb|CCO70354.1| ClpB protein [Yersinia enterocolitica IP 10393]
Length = 857
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 197/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E + + ++ E
Sbjct: 419 IIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLA--VDVEEIAE 176
+ + A+RV D Y KI + Q+ A + GK + L V EIAE
Sbjct: 479 LEQAKISLEQARRVGDLGRMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEAEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP S ++ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A L+D++D ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALATFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVV 762
>gi|304387133|ref|ZP_07369380.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
gi|304338785|gb|EFM04892.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
Length = 859
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|421888400|ref|ZP_16319495.1| Chaperone [Ralstonia solanacearum K60-1]
gi|378966210|emb|CCF96243.1| Chaperone [Ralstonia solanacearum K60-1]
Length = 862
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 131/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S+ TGIP S ++ +R++ RL +RV GQ++A+ ++ +A+ + +A
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRA- 592
Query: 229 KKGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
G++ + G FLF GP GK EL KA+A L+ D++ HLI DM + E S+
Sbjct: 593 --GIADENKPYGSFLFLGPTGVGKTELCKALAGFLF---DSEEHLIRIDMSEFMEKHSVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVL--DDGRLTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L Q+ + M ++ G V + + F+P L +D++VV
Sbjct: 706 QGRTVDFKNTVIVMTSNLGS-QLIQSMAGESFDVIKGAVWQEVKTHFRPEFLNRIDEVVV 764
>gi|386719694|ref|YP_006186020.1| clpB protein [Stenotrophomonas maltophilia D457]
gi|384079256|emb|CCH13854.1| ClpB protein [Stenotrophomonas maltophilia D457]
Length = 861
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 414
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 415 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDGLEREFSDLNEIWKSEKAALQGAT 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 474 KIKEQVEQAKL--ELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 532 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 590 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 704 GRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVMG----VVQAHFRPEFINR 759
Query: 386 LDKLVV 391
LD +VV
Sbjct: 760 LDDIVV 765
>gi|424669901|ref|ZP_18106926.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
gi|401071972|gb|EJP80483.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
Length = 861
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 414
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 415 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDGLEREFSDLNEIWKSEKAALQGAT 473
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 474 KIKEQVEQAKL--ELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 531
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 532 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 589
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 590 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 704 GRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVMG----VVQAHFRPEFINR 759
Query: 386 LDKLVV 391
LD +VV
Sbjct: 760 LDDIVV 765
>gi|345875625|ref|ZP_08827416.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
gi|417958313|ref|ZP_12601228.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
gi|343966971|gb|EGV35222.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
gi|343968700|gb|EGV36924.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 63/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R L ++ ID++ + R D +++DK
Sbjct: 361 HGIDITDPAIVAAAELSN--RYITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNE---LKDAFFEL---------VSFVKLRMQ 129
+ + +E + KE D S + L ID E L+ + +L S ++
Sbjct: 419 IIQLKMERMHVEKESDDASKKRLDL--IDEEIAGLQKEYADLDEIWKAEKAASAGTADIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYS-----------KILDQIDA--------RVHGKFKEKLAVD 170
+ DD + AKR D++ K+ Q+ A + + F+ K+ D
Sbjct: 477 KQIDDIKVKIEQAKRQGDFARASELEYGELPKLSQQLQALENNPQEQQANKLFRTKVGAD 536
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
E+AE+ S++TGIP S ++ ++++ L RV GQN+A+ + A+ + ++
Sbjct: 537 --EVAEIVSRMTGIPVSKMMEGERDKLLKMEEVLHNRVVGQNEAVRAVSNAIRR---SRS 591
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GL+ + G FLF GP GK EL KA+A+ L+D+ D HLI DM Y E ++
Sbjct: 592 GLADPNKPYGSFLFLGPTGVGKTELCKALASFLFDSED---HLIRIDMSEYMEKHAVARL 648
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 IGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 706
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + M T+ Y V EV F+P ++ +D++VV
Sbjct: 707 RTVDFKNTVIVMTSNIGSHHIQQ-MGTSDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 763
>gi|123441247|ref|YP_001005234.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420257395|ref|ZP_14760155.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088208|emb|CAL10996.1| Clp ATPase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404515185|gb|EKA28960.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 197/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF---------ELVSFVKLR-MQVE 131
+ + +E + L KE D S + + + E K+ + E + + ++ E
Sbjct: 419 IIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTE 478
Query: 132 YDDFVSCVHDAKRVKD--------YSKILD---QIDAR--VHGKFKEKLA--VDVEEIAE 176
+ + A+RV D Y KI + Q+ A + GK + L V EIAE
Sbjct: 479 LEQAKISLEQARRVGDLARMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEAEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V ++ TGIP S ++ +R++ L KRV GQ++A++ + A+ + +A GLS
Sbjct: 539 VLARWTGIPVSRMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL KA+A L+D++D ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELCKALATFLFDSDDA---MVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E +Y V EV F+P + +D++VV
Sbjct: 711 NTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVV 762
>gi|456734399|gb|EMF59215.1| ClpB protein [Stenotrophomonas maltophilia EPM1]
Length = 859
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 412
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 413 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDGLEREFSDLNEIWKSEKAALQGAT 471
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 472 KIKEQVEQAKL--ELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 529
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 530 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 587
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 588 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 643
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 644 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 701
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 702 GRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVMG----VVQAHFRPEFINR 757
Query: 386 LDKLVV 391
LD +VV
Sbjct: 758 LDDIVV 763
>gi|385855517|ref|YP_005902030.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
gi|325204458|gb|ADY99911.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
Length = 859
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV S++TGIP S ++ ++++ L +RV GQ++A+ + +A+ + +
Sbjct: 535 VGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL+ + G FLF GP GK EL KA+A L+D+ D HLI DM Y E ++
Sbjct: 592 RSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSED---HLIRIDMSEYMEKHAVA 648
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 RLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDG 706
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS++ + + + M T Y V EV F+P ++ +D++VV
Sbjct: 707 QGRTVDFKNTVIVMTSNIGSQHIQQ-MGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVV 765
>gi|298674540|ref|YP_003726290.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
gi|298287528|gb|ADI73494.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
Length = 880
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 131/241 (54%), Gaps = 26/241 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IAEV S+ T IP + E+ ++ RL RV GQ++A+ + +A+ + A
Sbjct: 535 VDEEDIAEVVSEWTSIPVTKLMEGEREKLTHLEDRLHNRVVGQDEAVKAVSDAVVRAHAG 594
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K + +G F+F GP GK ELAKA+A +L+ DN+N+++ DM Y E ++
Sbjct: 595 IK--DPDKPIGSFIFLGPTGVGKTELAKALAADLF---DNENNMVRLDMSEYMEKHTVSR 649
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L +++RPYSV+LFD+IEKA+ + N++L+IL D R
Sbjct: 650 MIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHHDVFNIMLQIL--DDGRLTDAQ 707
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLT-ATYGRV-----NEVTGSLFKPSLLKLLDKLV 390
D NT+IIMTS++ + V+E + A Y ++ NE++ F+P L +D++
Sbjct: 708 GRTVDFKNTIIIMTSNIFVDYVHEQLENGADYSKMKSMAQNELSKH-FRPEFLNRIDEVA 766
Query: 391 V 391
+
Sbjct: 767 I 767
>gi|295093836|emb|CBK82927.1| ATP-dependent chaperone ClpB [Coprococcus sp. ART55/1]
Length = 858
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 22/238 (9%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +EI+++ SK TGIP + + + + + LKKRV GQ++A+D + +A+ + KA
Sbjct: 531 VSEDEISKIVSKWTGIPVAKLTESEKSKTLNLASELKKRVVGQDEAVDYVSDAIIRSKAG 590
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K S + +G F+F GP GK ELAK++A L+DN N ++ DM Y E S+
Sbjct: 591 IKDPS--KPIGSFIFLGPTGVGKTELAKSLAAALFDNEQN---MVRIDMSEYMEKHSVSR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVL--DDGRITDSQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
D NT+IIMTS++ + T N+V L F+P L +D+++
Sbjct: 704 GRTVDFKNTIIIMTSNIGGADIAAAGGEITDELKNDVMAQLKSRFRPEFLNRIDEIIT 761
>gi|158522706|ref|YP_001530576.1| ATPase [Desulfococcus oleovorans Hxd3]
gi|158511532|gb|ABW68499.1| ATPase AAA-2 domain protein [Desulfococcus oleovorans Hxd3]
Length = 862
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 27/241 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IAEV S+ TGIP S E+ + ++ RL RV GQN+A+ + +A+ + +
Sbjct: 535 VDAEDIAEVVSRWTGIPVSKMMEGEREKLVHMEDRLALRVVGQNEAVSAVSDAVRR---S 591
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R +G F+F GP GK ELAKA+A L+D+ +I DM Y E ++
Sbjct: 592 RSGLQDPNRPIGSFIFLGPTGVGKTELAKALAEFLFDS----EQVIRVDMSEYMEKHAVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPYSVVLFD+IEKA+ + N+LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGYLTESVRRRPYSVVLFDEIEKAHPDVFNILLQLL--DDGRMTDG 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLT-----ATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT++IMTS++ + E+ ++ +V FKP L +D+++
Sbjct: 706 HGRTVDFKNTIVIMTSNVGSHLIQEMSRANEDPDQVKEQITDVLRQNFKPEFLNRIDEII 765
Query: 391 V 391
V
Sbjct: 766 V 766
>gi|254526796|ref|ZP_05138848.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221538220|gb|EEE40673.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 918
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 32/256 (12%)
Query: 163 FKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEAL 222
F K V+ ++IA+V SK+TGIP S + ++ + ++ L ++V GQ AI+ + A+
Sbjct: 573 FPFKYQVEPDDIADVVSKITGIPISKVVSNERKKLVNLEKELSEKVIGQEKAIETVSAAI 632
Query: 223 TKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTE 282
+ + K S +R +G FLF GP GK ELAK++A L+D D L+ DM Y E
Sbjct: 633 RRARVGMK--SPKRPIGSFLFMGPTGVGKTELAKSLATALFDEED---ALLRLDMSEYME 687
Query: 283 LESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFN 330
++ + L V+++PYSV+L D+IEKA++ + N+LL++L D
Sbjct: 688 KNAVARLLGAPPGYIGYEEGGQLTEAVRRKPYSVILLDEIEKAHTEVFNILLQVL--DEG 745
Query: 331 RKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR-------------VNEVTGSL 377
R D NT+IIMTS+L + + E + + +N V S
Sbjct: 746 RLTDSQGRTVDFKNTVIIMTSNLAGKSILEYSQKISKSQEILDKDQQTFNDSINNVLSSF 805
Query: 378 FKPSLLKLLDKLVVID 393
F+P L +D++V D
Sbjct: 806 FRPEFLNRIDEVVKFD 821
>gi|329297088|ref|ZP_08254424.1| protein disaggregation chaperone [Plautia stali symbiont]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 196/418 (46%), Gaps = 64/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRLQIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFF-----------ELVSFVKLR-MQ 129
+ + +E + L KE D S + L +++EL E S + ++
Sbjct: 419 IIQLKLEQQALKKESDDASVKR--LEMLESELAQKEREYAELEEEWKAEKASLTGTQNIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---KLAVDVE-------------- 172
E + + A+RV D L Q+ +GK E +LA +
Sbjct: 477 AELEQARLAMEQARRVGD----LGQMSELQYGKIPELEKQLASATQAEGKTMKLLRNRVT 532
Query: 173 --EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EIA+V ++ TGIP + ++ +R++ L RV GQ++A++ + A+ + +A
Sbjct: 533 DVEIADVLARWTGIPVARMMEGERDKLLRMEQELHARVIGQDEAVEAVSNAIRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R +G FLF GP GK EL KA+AN L+D++D ++ DM + E S+
Sbjct: 590 GLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDA---MVRIDMSEFMEKHSVSRL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYSV+L D++EKA++ + N+LL++L D R
Sbjct: 647 VGAPPGYIGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V G F+P + +D++VV
Sbjct: 705 RTVDFRNTVVIMTSNLGSDLIQERFGALDYAEMKDVVITVVGHHFRPEFINRIDEVVV 762
>gi|379795351|ref|YP_005325349.1| Chaperone protein clpB [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872341|emb|CCE58680.1| Chaperone protein clpB [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 869
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 29/240 (12%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEI ++ S+ TGIP S E+ + + L KRV GQ+ A+D++ +A+ + +A K
Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIK- 596
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
R +G FLF GP GK ELAK++A L+ D++ H+I DM Y E ++
Sbjct: 597 -DPNRPIGSFLFLGPTGVGKTELAKSLAASLF---DSEKHMIRIDMSEYMEKHAVSRLIG 652
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++ PYSV+L D++EKA++ + N+LL+IL D R +
Sbjct: 653 APPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQIL--DEGRLTDSKGRS 710
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT--------GSLFKPSLLKLLDKLVV 391
D NT+IIMTS++ + + E + G + E T + FKP +L +D +V+
Sbjct: 711 VDFKNTIIIMTSNIGSQILLENV--KETGEITESTEKAVMTSLNAYFKPEILNRMDDIVL 768
>gi|78484759|ref|YP_390684.1| ATPase AAA [Thiomicrospira crunogena XCL-2]
gi|78363045|gb|ABB41010.1| ATPase family associated with various cellular activities
[Thiomicrospira crunogena XCL-2]
Length = 854
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 25/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV ++ TGIP S ++ +R++ + +V GQ++A+ + +A+ + +A G
Sbjct: 532 EEIAEVVARWTGIPISRMLEGERDKLLRMEEAIGAKVIGQSEAVSAVSDAIRRSRA---G 588
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R G FLF GP GK EL KA+A+ L+D D ++ DM + E S+
Sbjct: 589 LSDPNRPNGSFLFLGPTGVGKTELTKALADFLFDTQDA---IVRLDMSEFMEKHSVARLI 645
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 646 GAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 703
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGR----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + + E ATY V +V GS F+P + +D +VV
Sbjct: 704 TVDFKNTVIVMTSNLGSQIIQEKTGQATYEEMKRDVMDVVGSHFRPEFINRIDDIVV 760
>gi|403667813|ref|ZP_10933113.1| chaperone clpB [Kurthia sp. JC8E]
Length = 717
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +EIA + S+ TG+P + E+ + + L KRV GQNDA+ ++ EA+ + +A
Sbjct: 386 VTSDEIATIVSRWTGVPVTKMLQSEREKLLGLADTLHKRVVGQNDAVKLVTEAVWRARAG 445
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ + +G FLF GP GK ELAKA+A +L+D+ D H + DM Y E ++
Sbjct: 446 IQ--DPNKPIGSFLFLGPTGVGKTELAKALAEQLFDSED---HFVRIDMSEYMEKHTVSR 500
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L +++ PY+VVL D+IEKA+ + N+LL+IL D R
Sbjct: 501 LVGAPPGYIGYEEGGQLTEQIRRNPYAVVLLDEIEKAHPDVANILLQIL--DDGRITDGQ 558
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
+ TNT++IMTS+L + E+ + + V L FKP LL LD +V+
Sbjct: 559 GRTINFTNTVVIMTSNLGSHYLLEMNEENEHATEDLVMAELKQHFKPELLNRLDDIVM 616
>gi|292487321|ref|YP_003530193.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|291552740|emb|CBA19785.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|312171427|emb|CBX79686.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ATCC BAA-2158]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIA+V ++ TGIP + ++ +R++ L RV GQ +A++ + A+ + +A GL
Sbjct: 535 EIADVLARWTGIPVARMMEGERDKLLRMEQELHTRVIGQQEAVEAVSNAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + E+ S+ F+P + +D+LVV
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGALNYGEMKELVMSVVSQNFRPEFINRIDELVV 762
>gi|423121670|ref|ZP_17109354.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
gi|376393762|gb|EHT06417.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 62/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A+ ++ R A +L ++ ID++ + D +ELD+
Sbjct: 361 HHVQITDPAIVAAATLSH--RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR---- 414
Query: 82 LRRAVVEY---EQLVKEDTDHSSRSFWLRQIDNELKDA-----------FFELVSFVKLR 127
L R +++ +Q +K++ D +S L ++ EL D E S +
Sbjct: 415 LDRRIIQLKLEQQALKKEADEASLK-RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQ 473
Query: 128 -MQVEYDDFVSCVHDAKRVKD--------YSKILD---QIDARVHGKFKE----KLAVDV 171
++ E + + A+RV D Y KI + Q+ A + K + V
Sbjct: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTD 533
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EIAEV ++ TGIP + E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 AEIAEVLARWTGIPVARMMEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN ++ D+D+ ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF---DSDDAMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E Y + + V F+P + +D++VV
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYSHMKDLILGVVSQNFRPEFINRIDEVVV 762
>gi|262279691|ref|ZP_06057476.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
gi|262260042|gb|EEY78775.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
Length = 859
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ + ++G L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLNMEGFLHDRVVGQDEAVVAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEV----TGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ AT V + F+P + +D+LV+
Sbjct: 705 VDFKNTVIVMTSNLGSQDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVI 760
>gi|163802431|ref|ZP_02196324.1| ClpB protein [Vibrio sp. AND4]
gi|159173732|gb|EDP58547.1| ClpB protein [Vibrio sp. AND4]
Length = 860
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 194/412 (47%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 361 HHVEITDPAIVAAASLSH--RYVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSF-WLRQIDNELKDAFFEL-------------VSFVKLR 127
+ + +E + L E+ D S + L + NE + + EL +K
Sbjct: 419 IIQLKIEQQALSNENDDASEKRLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKSE 478
Query: 128 M-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEIAE 176
+ Q D DF D R+ + Y +I + Q+D + +E + V EIAE
Sbjct: 479 LEQARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V SK TGIP S +E+ + ++ L KRV GQ +A++V+ A+ + +A GLS
Sbjct: 539 VLSKQTGIPVSKMLEAEKEKLLHMEDVLHKRVIGQAEAVEVVSNAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
+ +G FLF GP GK EL K +A+ ++D+ D ++ DM + E S+ +
Sbjct: 596 KPIGSFLFLGPTGVGKTELCKTLASFMFDSEDA---MVRIDMSEFMEKHSVARLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E T Y V +V F+P L +D+ VV
Sbjct: 711 NTVVIMTSNLGSARIQENFATLDYQGIKNEVMDVVSKHFRPEFLNRVDESVV 762
>gi|407692736|ref|YP_006817525.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
gi|407388793|gb|AFU19286.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L RV GQN+A++ + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +AN L+++ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFEDPD---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSVVL D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVY---EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + E+ + V V G F+P + +D+ VV
Sbjct: 706 TVDFRNTVVIMTSNLGSHLIQENPELDYASMKEVVMSVVGQHFRPEFINRIDETVV 761
>gi|383454395|ref|YP_005368384.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
gi|380732359|gb|AFE08361.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
Length = 874
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 27/244 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
VD E+IA V +K TGIP S ++ ++++ RL +RV GQ I+ + A+ + A
Sbjct: 533 VDSEDIASVVAKWTGIPVSKLMEGEMQKLVKMEDRLAERVIGQRSPIEAVSNAVRR---A 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ GL R +G F+F GP GK E AKA+A L+D+ D ++ DM Y E ++
Sbjct: 590 RSGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDD---DTAMVRIDMSEYMEKHAVS 646
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++RPY+VVLFD+IEKA+ + N+LL+IL D R
Sbjct: 647 RLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNILLQIL--DEGRVTDS 704
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTA------TYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++I+TS++ + + E M T G V E + F+P L +D++
Sbjct: 705 QGRTVDFRNTVLILTSNIGSQAIQEGMAGTDTLNEKTRGEVMEALRAHFRPEFLNRVDEI 764
Query: 390 VVID 393
V+ +
Sbjct: 765 VIFE 768
>gi|326388358|ref|ZP_08209954.1| AAA ATPase, central region [Novosphingobium nitrogenifigens DSM
19370]
gi|326207090|gb|EGD57911.1| AAA ATPase, central region [Novosphingobium nitrogenifigens DSM
19370]
Length = 859
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 125/239 (52%), Gaps = 23/239 (9%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V E+IA V S+ TGIP E+ + ++ L KRV GQ DA+ + +A+ + +A
Sbjct: 532 VTAEDIAAVVSRWTGIPVDRMMEGEREKLLHMEDALGKRVIGQKDAVTAVSKAVRRARAG 591
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
+ R LG FLF GP GK EL KA+A ++ D+DN ++ DM + E S+
Sbjct: 592 LQ--DPNRPLGSFLFLGPTGVGKTELTKALAGFMF---DDDNAMVRIDMSEFMEKHSVSR 646
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPY VVLFD++EKA+ + N+LL++L D R
Sbjct: 647 LIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHQDVFNVLLQVL--DDGRLTDGQ 704
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVM----LTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D TNTLII+TS+L + + + ++ +V EV + F+P L LD++++
Sbjct: 705 GRVVDFTNTLIILTSNLGSQYLANLPDGADASSVEPQVMEVVRAHFRPEFLNRLDEIIL 763
>gi|389808749|ref|ZP_10204912.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
gi|388442473|gb|EIL98665.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
Length = 865
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 195/419 (46%), Gaps = 59/419 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + R D +ELD+ +
Sbjct: 361 HGVEITDPAIVAAATLSH--RYISDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERR 418
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFELVSFVK-----LRMQVEYDDF 135
L + ++ E L KE D++ R L +L+ F +L K L+ +
Sbjct: 419 LIQLKIQREMLKKEKDSESKQRLADLETDIGKLEREFSDLNEIWKSEKAALQGTTRVKEQ 478
Query: 136 VSCVHD----AKRVKDYSKILD-----------QIDARVHGKFKE----KLAVDVEEIAE 176
+ H A+R +DY+K+ + Q+ A + ++ + V EEIAE
Sbjct: 479 IEQAHQELDAAQRQQDYAKMSEIQYGKLPALEKQLAAAQAAETQDFKLVQTKVTAEEIAE 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S+ TGIP S ++ + ++ L KRV GQ++A+ + +A+ + +A GLS
Sbjct: 539 VVSRWTGIPVSKMLEGERDKLLHMEDELHKRVVGQDEAVHAVSDAIRRSRA---GLSDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R G FLF GP GK EL KA+A ++D D ++ DM + E S+ +
Sbjct: 596 RPNGSFLFLGPTGVGKTELCKALAEFMFDTTD---AMVRIDMSEFMEKHSVSRLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFR 710
Query: 344 NTLIIMTSDLKDEQVY-----------EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+I+MTS+L + + E T V V + F+P + LD++VV
Sbjct: 711 NTVIVMTSNLGSQMIQDEVESNGSDDAEAQYTRMKASVLGVVQAHFRPEFINRLDEIVV 769
>gi|415721679|ref|ZP_11468612.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
gi|388060384|gb|EIK83076.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
Length = 864
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 199/420 (47%), Gaps = 59/420 (14%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H++ I D+A+ A+ ++ R +L ++ ID++ + D +E+D+
Sbjct: 359 EAHHKVTISDDAIVAAATLSN--RYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDEL 416
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVK------------- 125
+ + R +E QL K + D ++R L ++ EL ++ +L
Sbjct: 417 QRKVTRLEMEEMQLKKAE-DAAARE-RLEKLQEELANSREKLSGLKARWDAEKAGHNKVG 474
Query: 126 -LRMQ-----VEYDDFV--SCVHDAKRV-----KDYSKILDQID---ARVHGKFKEKLA- 168
LR Q VE D F + A R+ K L++ + A + KE +
Sbjct: 475 DLRAQLDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVP 534
Query: 169 --VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPK 226
VD + IA V S+ TGIP E+ + ++ L KRV GQ++AI I +A+ + +
Sbjct: 535 DQVDADSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSR 594
Query: 227 AAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELES 285
A G++ R G FLF GP GK ELAKA+A+ L+ D++ ++ DM Y E S
Sbjct: 595 A---GIADPNRPTGSFLFLGPTGVGKTELAKALADFLF---DDERAMVRIDMSEYMEKAS 648
Query: 286 IKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKA 333
+ + L V++RPYSVVLFD++EKA+ + ++LL++L D R
Sbjct: 649 VSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDILLQVL--DDGRLT 706
Query: 334 TRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGR--VNEVTGSLFKPSLLKLLDKLVV 391
D TNT++IMTS+L + + + L T R V + FKP + LD+LV+
Sbjct: 707 DGQGRTVDFTNTILIMTSNLGSQFLVQEGLDDTAKRKAVMNAVHAEFKPEFINRLDELVM 766
>gi|296268236|ref|YP_003650868.1| ATP-dependent chaperone ClpB [Thermobispora bispora DSM 43833]
gi|296091023|gb|ADG86975.1| ATP-dependent chaperone ClpB [Thermobispora bispora DSM 43833]
Length = 861
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 198/419 (47%), Gaps = 56/419 (13%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E H++QI D AL A+ ++ R L ++ ID++ + + R D E+D+
Sbjct: 358 EAHHQVQISDSALVAAATLSD--RYITARFLPDKAIDLVDEAMSRLRMEIDSRPVEIDQL 415
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------ 126
+ + R +E L KE TD +SR L ++ EL + EL + +
Sbjct: 416 QRSVDRLKMEELALAKE-TDAASRE-RLEKLREELANKQEELNALISRWEREKAGLNKVG 473
Query: 127 RMQVEYDDFVSCVHDAKRVKDY---SKILDQIDARVHGKFKE--KLA------------V 169
++ + D+ S A+R D+ S+++ R+ + E K+A V
Sbjct: 474 ELKKQLDEARSAAERAQRDGDFETASRLMYGEIPRLEKELSEASKIAEAAETAPMVKEEV 533
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
+EIAEV S TGIPA + +R++ L KR+ GQ+ A+ + +A+ + A+
Sbjct: 534 GPDEIAEVVSAWTGIPAGRLLEGESAKLLRMEDELGKRLIGQHRAVQAVSDAVRR---AR 590
Query: 230 KGLSSR-RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
G+S R G F+F GP GK ELAKA+A L+ D++ + DM Y+E ++
Sbjct: 591 AGISDPDRPTGSFMFLGPTGVGKTELAKALAEFLF---DDERAMTRIDMSEYSEKHTVAR 647
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPY+VVL D+IEKA+ + ++LL++L D R
Sbjct: 648 LVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEIEKAHPEVFDILLQVL--DDGRLTDGQ 705
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVML--TATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT++I+TS+L + + + L A + V + FKP L LD +++ D
Sbjct: 706 GRTVDFRNTILILTSNLGSQYLVDPQLDQAAKHEAVMNAVRAAFKPEFLNRLDDIIIFD 764
>gi|429329276|gb|AFZ81035.1| hypothetical protein BEWA_004430 [Babesia equi]
Length = 1038
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 165/356 (46%), Gaps = 56/356 (15%)
Query: 84 RAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHDAK 143
R V E +VK + D + R F L N + FE + ++ ++Q
Sbjct: 631 RNVKERMDVVKVEIDRAERDFDL----NRAAELRFETLPDLERQLQ-------------G 673
Query: 144 RVKDYSKILDQIDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGR 203
V DY + +I + G+ + V E+IA V S+ TGIP S E+ +++
Sbjct: 674 AVGDYEAHVKEIQSS-GGQLLLRDEVTREDIANVVSRWTGIPLSKLVKTQREKILQMSDE 732
Query: 204 LKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELY 263
L KR+ GQ +AID + ++ + + ++ + +F GP GK EL KAIA +L+
Sbjct: 733 LHKRIVGQQEAIDAVTASVQRSRVGMN--DPKKPIAGLMFLGPTGVGKTELCKAIAEQLF 790
Query: 264 DNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIE 311
D + ++ FDM Y E S+ + L V++RPYS+VLFD+IE
Sbjct: 791 DTEE---AIVRFDMSEYMEKHSVSRLVGAPPGYVGFEQGGLLTEAVRRRPYSIVLFDEIE 847
Query: 312 KANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN 371
KA+ + NLLL++L D R + TNTLI+ TS+L + + E L + N
Sbjct: 848 KAHPDVFNLLLQVL--DDGRLTDSNGRKVNFTNTLIVFTSNLGSQNILE--LAKFPDKRN 903
Query: 372 EVTGSL-------FKPSLLKLLDKLVVID-LAVPLLDTTRLLLREW---ACEETKR 416
E+ + F P L +D+ +V D L+ P +D EW AC E K+
Sbjct: 904 EMKNKVMASVRQTFSPEFLNRIDEFIVFDSLSKPGMDD------EWLMHACAELKK 953
>gi|126654342|ref|ZP_01726104.1| ClpB [Bacillus sp. B14905]
gi|126589213|gb|EAZ83380.1| ClpB [Bacillus sp. B14905]
Length = 708
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 37/244 (15%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIA + S+ TGIP + E+ +R++ L +RV GQ+ A+ ++ EA+ + +A
Sbjct: 384 VTAEEIAAIVSRWTGIPVTKLVEGEREKLLRLKDTLHERVVGQDTAVQLVTEAVWRARAG 443
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G FLF GP GK ELAKA+A +L+D+ D H I DM Y E S+
Sbjct: 444 IK--DPHRPIGSFLFLGPTGVGKTELAKALAAQLFDSED---HFIRIDMSEYMEKHSVSR 498
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++ PYSVVL D+IEKA+ + N+LL+IL D R
Sbjct: 499 LVGAPPGYIGYEEGGQLTEAVRRNPYSVVLLDEIEKAHPDVANILLQIL--DDGRITDSQ 556
Query: 337 IAAFDLTNTLIIMTSDL----------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLL 386
+ TNT++I+TS++ D V ++++TA FKP LL +
Sbjct: 557 GRMVNFTNTVVILTSNIGSSYLMEAKDDDPTVEDLVMTALRQH--------FKPELLNRM 608
Query: 387 DKLV 390
D ++
Sbjct: 609 DDII 612
>gi|344208582|ref|YP_004793723.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
gi|343779944|gb|AEM52497.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
Length = 861
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 202/425 (47%), Gaps = 75/425 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 414
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWL---RQID---------NEL-KDAFFELVSFVK 125
L R V++ + +++K++ D +SR + ID NE+ K L K
Sbjct: 415 LERRVIQLKIQREMLKKEKDEASRQRLADLEKDIDALEREFSDLNEIWKSEKAALQGATK 474
Query: 126 LRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAVD 170
++ QVE + A+R +D++K +L Q++ ++ H FK + V
Sbjct: 475 IKEQVEQAKL--ELESAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRVT 532
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 533 DEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIRVVSDAVRRSRA--- 589
Query: 231 GLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF 289
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 590 GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVARL 646
Query: 290 FDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGI 337
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 647 IGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQG 704
Query: 338 AAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKLL 386
D NT+I+MTS+L Q+ Y M A G V + F+P + L
Sbjct: 705 RTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVMG----VVQAHFRPEFINRL 760
Query: 387 DKLVV 391
D +VV
Sbjct: 761 DDIVV 765
>gi|262401592|ref|ZP_06078158.1| ClpB protein [Vibrio sp. RC586]
gi|262352009|gb|EEZ01139.1| ClpB protein [Vibrio sp. RC586]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSGRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|85711023|ref|ZP_01042083.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina baltica OS145]
gi|85694936|gb|EAQ32874.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Idiomarina baltica OS145]
Length = 856
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 198/412 (48%), Gaps = 52/412 (12%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D ++LD+ +
Sbjct: 361 HSVEITDPAIVAAASLSH--RYISDRKLPDKAIDLIDEAASSIRMQIDSKPEDLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSF-WLRQIDNELKDAFFEL-------------VSFVKLR 127
+ + +E + L KE D S + L +EL+ + EL +K +
Sbjct: 419 IIQLKLERQALQKEKDDASKKRLEHLHDELDELEKKYGELEEVWNSEKAAVQGTQHIKSQ 478
Query: 128 M-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEIAE 176
+ QV + D D R+ + Y +I + Q+D + + ++ K V EEIA+
Sbjct: 479 LDQVRTEMDIARRAGDLNRMSELQYGRIPELERQLDLALQAEMQDMSLLKNRVTDEEIAD 538
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SR 235
V S+ TGIP S E+ ++++ L KRV GQN+A+D + A+ + +A GL
Sbjct: 539 VLSRWTGIPVSKMLEGEREKLVQMESLLHKRVVGQNEAVDAVANAIRRSRA---GLGDPN 595
Query: 236 RQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS--- 292
R +G FLF GP GK EL+KA+AN ++D +D ++ DM + E S+ +
Sbjct: 596 RPIGSFLFLGPTGVGKTELSKALANFMFDTDDA---MVRIDMSEFMEKHSVARLVGAPPG 652
Query: 293 ---------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLT 343
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 653 YVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDFK 710
Query: 344 NTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L + + +Y V +V F+P L +D+ VV
Sbjct: 711 NTVIIMTSNLGSDLIQAHASDNSYDEMKAMVMDVLAGHFRPEFLNRVDETVV 762
>gi|423198677|ref|ZP_17185260.1| chaperone ClpB [Aeromonas hydrophila SSU]
gi|404629867|gb|EKB26592.1| chaperone ClpB [Aeromonas hydrophila SSU]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 195/413 (47%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAAQLSH--RYIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWL--RQID------NELKD------AFFELVSFVKLR 127
+ + +E + L+KED D S + L ++I NEL++ A +K
Sbjct: 419 IIQLKLEQQALMKEDDDASRKRLELINQEIGEKDREYNELEEVWKAEKAALAGTQHIKAA 478
Query: 128 M-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE-----KLAVDVEEIA 175
+ Q D D D R+ + Y +I + Q+D + +E DVE IA
Sbjct: 479 LEQARQDLDVARRAGDLGRMSELQYGRIPELEKQLDLATQAEMQETSLLRNRVTDVE-IA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
+V ++ TGIP + E+ +R++ +L RV GQ +A++ + A+ + +A GLS
Sbjct: 538 DVLARWTGIPVARMLEGEREKLLRMEDQLHSRVIGQEEAVEAVSNAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL KA+A L+D D ++ DM + E S+ +
Sbjct: 595 NRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA---MVRIDMSEFMEKHSVARLVGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + EV F+P + +D+ VV
Sbjct: 710 RNTVVIMTSNLGSDLIQEHHSEKDYNEMKAMLMEVLARSFRPEFINRIDETVV 762
>gi|424658578|ref|ZP_18095835.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
gi|408054712|gb|EKG89675.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
Length = 823
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 501 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 557
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 558 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMVRVDMSEFMEKHSVARLVG 614
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 615 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 672
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E + F+P L +D+ VV
Sbjct: 673 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDIVSKHFRPEFLNRVDESVV 728
>gi|300864313|ref|ZP_07109191.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300337702|emb|CBN54337.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 904
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 128/244 (52%), Gaps = 32/244 (13%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +IAE+ +K TGIP + ++ ++++ L +RV GQ++A++ + A+ + +A
Sbjct: 559 VTASDIAEIVAKWTGIPVNRLLESERQKLLQLEKHLHQRVIGQHEAVEAVSAAIRRARAG 618
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G FLF GP GK ELA+A+A L+ D D+ ++ DM Y E S+
Sbjct: 619 MK--DPGRPIGSFLFMGPTGVGKTELARALAEFLF---DTDDAIVRIDMSEYMEKHSVSR 673
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L+ V++ PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 674 LVGAPPGYVGYDEGGQLSEAVRRHPYSVVLFDEVEKAHPDVFNILLQVL--DDGRITDSQ 731
Query: 337 IAAFDLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLD 387
D NT+I+MTS++ D+ YE+M Y RV + S F+P L +D
Sbjct: 732 GRVVDFRNTVIVMTSNIGSDYILDVAGDDSKYEMM----YKRVTDALRSHFRPEFLNRVD 787
Query: 388 KLVV 391
+++
Sbjct: 788 DIIL 791
>gi|410614264|ref|ZP_11325313.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
gi|410166186|dbj|GAC39202.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
psychrophila 170]
Length = 856
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 193/413 (46%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D +++DK +
Sbjct: 361 HSVEITDPAIVAAASLSH--RYISDRQLPDKAIDLIDEAASSIRLQMDSKPEDMDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFV----KLRMQ------VE 131
+ + +E + L KE + S + L +++ E + F + K MQ E
Sbjct: 419 IIQLKLEEQALSKEKDEASHKRLELIELEREQAEHKFSAFETIWIAEKQAMQGTQTIRSE 478
Query: 132 YDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLAVDVE----------------EIA 175
+ + A+R D S++ + R+ + + KL V E EIA
Sbjct: 479 LEQAKLDLEIARRASDLSRMSELQYGRIP-ELEAKLEVATESETQETTLLKNKVTESEIA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
+V S+ TGIP S + + + ++ L KRV GQ++A+ + A+ + +A GLS
Sbjct: 538 DVLSRWTGIPVSKMLEGEKVKLLAMEEALHKRVVGQSEAVTAVANAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL K +AN L+ D +N ++ DM + E S+ +
Sbjct: 595 NRPIGSFLFLGPTGVGKTELCKTLANFLF---DTENAMVRIDMSEFMEKHSVARMVGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS+L + + EV + Y G V G F+P L +D +VV
Sbjct: 710 KNTVIIMTSNLGSDIIQEVSGESNYQQMKGLVMNAVGEHFRPEFLNRVDDIVV 762
>gi|419829326|ref|ZP_14352814.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
gi|419832128|ref|ZP_14355593.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
gi|423849446|ref|ZP_17719228.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
gi|423879099|ref|ZP_17722834.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
gi|408621960|gb|EKK94952.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
gi|408643807|gb|EKL15524.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
gi|408644845|gb|EKL16519.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
gi|408652029|gb|EKL23268.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
Length = 823
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 501 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 557
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 558 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSED---AMVRVDMSEFMEKHSVARLVG 614
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L ++++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 615 APPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 672
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 673 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 728
>gi|418049352|ref|ZP_12687439.1| ATP-dependent chaperone ClpB [Mycobacterium rhodesiae JS60]
gi|353190257|gb|EHB55767.1| ATP-dependent chaperone ClpB [Mycobacterium rhodesiae JS60]
Length = 848
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 192/416 (46%), Gaps = 59/416 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D AL A+ ++ R + L ++ ID++ + R D E+D+ +
Sbjct: 362 HGVQITDSALVAAATLSD--RYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEVDEVERL 419
Query: 82 LRRAVVEYEQLVKE-DTDHSSRSFWLRQIDNELKDAFFEL-------------VSFVKLR 127
+RR +E L KE D R LR +L++ EL V K +
Sbjct: 420 VRRLEIEEMALAKEEDAASKERLEKLRAELADLREKLAELTTRWQNEKNAIDIVREFKEQ 479
Query: 128 MQV--------EYDDFVSCVHDAK--RVKDYSKILD----QIDARVHGKFKEKLAVDVEE 173
++V E D ++ + + R+ + K LD Q++AR KE++ D +
Sbjct: 480 LEVLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPQVEAREAVMLKEQVGPD--D 537
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IA+V S TGIPA + +R++ L +RV GQ A+ + +A+ + +A
Sbjct: 538 IADVVSAWTGIPAGRMLEGETAKLLRMEEELGRRVVGQTKAVQAVSDAVRRSRAGVA--D 595
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R G FLF GP GK ELAKA+A+ L+D+ + ++ DM Y E S+ +
Sbjct: 596 PNRPTGSFLFLGPTGVGKTELAKALADFLFDD---ERAMVRIDMSEYGEKHSVARLVGAP 652
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPY+VVLFD++EKA+ + ++LL++L D R D
Sbjct: 653 PGYIGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVL--DEGRLTDGQGRTVD 710
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAVP 397
NT++I+TS+L E ++ A + FKP + LD +++ D P
Sbjct: 711 FRNTILILTSNLGSGGTEEQVMAAVR--------AAFKPEFINRLDDVLIFDALNP 758
>gi|345863973|ref|ZP_08816179.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124880|gb|EGW54754.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 862
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 25/237 (10%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIA V SK TGIP S ++ +R++ + +RV GQ + I + +A+ + +A G
Sbjct: 534 EEIAGVVSKWTGIPVSKMLEGERDKLLRMEQEIGRRVIGQQEGIKAVSDAIRRSRA---G 590
Query: 232 LSSRRQL-GLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
L+ Q G FLF GP GK EL KA+A L+D + +I DM + E S+
Sbjct: 591 LADPSQPNGSFLFLGPTGVGKTELCKALAEFLFDTEEA---MIRIDMSEFMEKHSVARLI 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILMDEVEKAHPDVFNVLLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L E + E YG V EV S F+P + LD++VV
Sbjct: 706 TVDFRNTVIVMTSNLGSELIQEKSTEEQYGVMKEAVMEVVRSAFRPEFINRLDEIVV 762
>gi|422916499|ref|ZP_16950837.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
gi|423817409|ref|ZP_17715440.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
gi|423996921|ref|ZP_17740184.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
gi|424015624|ref|ZP_17755471.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
gi|424020734|ref|ZP_17760514.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
gi|424628600|ref|ZP_18066905.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
gi|424632634|ref|ZP_18070750.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
gi|443528620|ref|ZP_21094654.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
gi|341640132|gb|EGS64727.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
gi|408020657|gb|EKG57947.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
gi|408058575|gb|EKG93367.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
gi|408636632|gb|EKL08769.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
gi|408854299|gb|EKL94063.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
gi|408861789|gb|EKM01356.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
gi|408866599|gb|EKM05979.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
gi|443453194|gb|ELT17027.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L ++++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAIRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E V F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVV 762
>gi|254524598|ref|ZP_05136653.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
gi|219722189|gb|EED40714.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
Length = 859
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 77/426 (18%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R +L ++ ID++ + R D +ELD+
Sbjct: 359 HGVEITDPAIVAAATLSN--RYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDR---- 412
Query: 82 LRRAVVEYE---QLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFV 124
L R V++ + +++K++ D +SR L ++N++ K L
Sbjct: 413 LERRVIQLKIQREMLKKEKDEASRQ-RLADLENDIDALEREFSDLNEIWKSEKAALQGAT 471
Query: 125 KLRMQVEYDDFVSCVHDAKRVKDYSK-------ILDQIDARV-------HGKFK-EKLAV 169
K++ QVE + A+R +D+++ +L Q++ ++ H FK + V
Sbjct: 472 KIKEQVEQAKL--DLESAQRRQDFARMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRV 529
Query: 170 DVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAK 229
EEIAEV S+ TGIP + ++ +R++ L RV GQ +AI V+ +A+ + +A
Sbjct: 530 TDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRA-- 587
Query: 230 KGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
GLS R G FLF GP GK EL K++A L+D+ D +I DM + E S+
Sbjct: 588 -GLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFDSAD---AMIRIDMSEFMEKHSVAR 643
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V++RPYS++L D++EKA+ + N+LL++L D R
Sbjct: 644 LIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVL--DDGRLTDGQ 701
Query: 337 IAAFDLTNTLIIMTSDLKDEQV-----------YEVMLTATYGRVNEVTGSLFKPSLLKL 385
D NT+I+MTS+L Q+ Y M A G V + F+P +
Sbjct: 702 GRTVDFRNTVIVMTSNLGSHQIQDMSADDSPEAYTQMKAAVMG----VVQAHFRPEFINR 757
Query: 386 LDKLVV 391
LD +VV
Sbjct: 758 LDDIVV 763
>gi|428784253|ref|ZP_19001745.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
gi|426277392|gb|EKV55118.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
Length = 836
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIA+V ++ TGIP + ++ +R++ L RV GQ +A++ + A+ + +A GL
Sbjct: 514 EIADVLARWTGIPVARMMEGERDKLLRMEQELHTRVIGQQEAVEAVSNAIRRSRA---GL 570
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL KA+AN ++D++D ++ DM + E S+
Sbjct: 571 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDA---MVRIDMSEFMEKHSVSRLVG 627
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D++EKA+ + N+LL++L D R
Sbjct: 628 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 685
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT++IMTS+L + + E YG + E+ S+ F+P + +D+LVV
Sbjct: 686 VDFRNTVVIMTSNLGSDLIQERFGALNYGEMKELVMSVVSQNFRPEFINRIDELVV 741
>gi|145296772|ref|YP_001139593.1| hypothetical protein cgR_2676 [Corynebacterium glutamicum R]
gi|417969445|ref|ZP_12610384.1| hypothetical protein CgS9114_00385 [Corynebacterium glutamicum
S9114]
gi|140846692|dbj|BAF55691.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344046162|gb|EGV41828.1| hypothetical protein CgS9114_00385 [Corynebacterium glutamicum
S9114]
Length = 852
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 193/419 (46%), Gaps = 65/419 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R + L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAAELSN--RYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLR-------------M 128
+RR +E L KE +D +S+ L ++ +EL D E +S +K R M
Sbjct: 421 VRRLEIEEMALSKE-SDAASKE-RLEKLRSELADE-REKLSELKARWQNEKTAIDDVREM 477
Query: 129 QVEYDDFVSCVHDAKRVKDYSKILD------------------QIDARVHGKFKEKLAVD 170
+ E + S A+R +Y ++ + +++ + E++ D
Sbjct: 478 KEELEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEVTPD 537
Query: 171 VEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKK 230
IA+V S TGIPA E+ + ++ L RV GQ +A+ + +A+ + +A
Sbjct: 538 T--IADVVSAWTGIPAGKMMQGETEKLLNMERVLGNRVVGQLEAVTAVSDAVRRSRAGVA 595
Query: 231 GLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
R G FLF GP GK ELAKA+A L+ D+D +I DM Y E S+
Sbjct: 596 --DPNRPTGSFLFLGPTGVGKTELAKAVAEFLF---DDDRAMIRIDMSEYGEKHSVARLV 650
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPY+VVLFD++EKA+S + ++LL++L D R
Sbjct: 651 GAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVL--DEGRLTDGQGR 708
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVIDLAVP 397
D NT++I+TS+L E M+ A FKP + LD +V+ D P
Sbjct: 709 TVDFRNTILILTSNLGAGGTREQMMDAVK--------MAFKPEFVNRLDDVVIFDRLSP 759
>gi|399521946|ref|ZP_10762611.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109981|emb|CCH39171.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 854
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 56/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A++++ R +L ++ ID++ + R D +ELD+
Sbjct: 361 HGVTITDGAIIAAAKLSH--RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDN--ELKDAFFELVSFVK---------LRMQV 130
L + +E E L KED D ++R + D+ +L+ + +L K ++Q
Sbjct: 419 LIQLKIEREALKKED-DEATRKRLEKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQ 477
Query: 131 EYDDFVSCVHDAKR--------------VKDYSKILDQIDARVHGKFKEKL---AVDVEE 173
+ + + + A+R + D + L +DA HGK + +L V EE
Sbjct: 478 KIEQAKTELEAARRKGDLNRMAELQYGIIPDLERSLQMVDA--HGKAENQLLRNKVTDEE 535
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
IAEV SK TGIP S E+ ++++ L +RV GQ++A+ + A+ + +A GL+
Sbjct: 536 IAEVVSKWTGIPVSKMLEGEREKLLKMEDLLHQRVIGQHEAVVAVANAVRRSRA---GLA 592
Query: 234 -SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS 292
R G FLF GP GK EL KA+A L+D + L+ DM + E S+ +
Sbjct: 593 DPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEA---LVRIDMSEFMEKHSVARLIGA 649
Query: 293 ------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
L V+++PYSVVL D++EKA+ + N+LL++L+ D + G
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLE-DGRLTDSHG-RTV 707
Query: 341 DLTNTLIIMTSDLKDEQVYEVM--LTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+I+MTS+L Q+ E++ A V + GS F+P + +D++VV +
Sbjct: 708 DFKNTVIVMTSNLGSAQIQELVGDKEAQRAAVMDAVGSHFRPEFINRIDEVVVFE 762
>gi|354596494|ref|ZP_09014511.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
gi|353674429|gb|EHD20462.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 127/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV ++ TGIP S E+ +R++ L +RV GQ++A++ + ++ + +A GL
Sbjct: 535 EIAEVLARWTGIPVSRMLESEREKLLRMEEALHQRVIGQDEAVEAVANSIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +A+ L+D++D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDA---MVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V++RPYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATY----GRVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L + + E +Y G V EV F+P + +D++VV
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGERSYAEMRGMVLEVVSHSFRPEFINRIDEVVV 762
>gi|422909223|ref|ZP_16943874.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
gi|341635611|gb|EGS60321.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S +E+ +R++ L KRV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN L+D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDA---MVRVDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E Y + E + F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDIVSKHFRPEFLNRVDESVV 762
>gi|433446675|ref|ZP_20410567.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
gi|432000182|gb|ELK21082.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
Length = 860
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 29/243 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIA + SK TGIP + E+ +R+ L +RV GQ++A++++ +A+ + +A
Sbjct: 531 VTEEEIATIVSKWTGIPVTKLVEGEREKLLRLSNILHERVIGQDEAVELVSDAVLRARAG 590
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K R +G FLF GP GK ELAKA+A L+ D++ +I DM Y E ++
Sbjct: 591 MK--DPNRPIGSFLFLGPTGVGKTELAKALAEALF---DSEQQMIRIDMSEYMEKHAVSR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSV+L D+IEKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQML--DDGRMTDSQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLLDK 388
D NT++IMTS++ + E + +G VNE V L F+P L +D
Sbjct: 704 GRTVDFKNTVVIMTSNIGSHTLLEAV--DAHGEVNEEAREQVLKQLRAHFRPEFLNRIDD 761
Query: 389 LVV 391
+V+
Sbjct: 762 IVL 764
>gi|218245816|ref|YP_002371187.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8801]
gi|257058862|ref|YP_003136750.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8802]
gi|218166294|gb|ACK65031.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8801]
gi|256589028|gb|ACU99914.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8802]
Length = 872
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 132/259 (50%), Gaps = 38/259 (14%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAE+ SK TGIP S +E+ ++++ L +RV GQ +A+ + EA+ + +A GL
Sbjct: 541 DIAEIISKWTGIPLSKLVESEKEKLLQLEDELHERVIGQEEAVTAVSEAIQRSRA---GL 597
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R F+F GP GK ELAKA+A L+ D + L+ DM Y E ++
Sbjct: 598 SDPNRPTASFIFLGPTGVGKTELAKALAKNLF---DTEEALVRIDMSEYMEKHAVSRLLG 654
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++RPYSV+LFD+IEKA++ + N++L+IL D R
Sbjct: 655 APPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQIL--DDGRLTDAQGHV 712
Query: 340 FDLTNTLIIMTSDLKDEQVYEVM-----LTATYGRVNEVTGSLFKPSLLKLLDKLV---- 390
D NT+IIMTS++ + + +V RV E + F+P L +D+++
Sbjct: 713 VDFKNTIIIMTSNIGSQYILDVAGDDSRYEEMRSRVMEAMTNSFRPEFLNRIDEIIIFHG 772
Query: 391 --------VIDLAVPLLDT 401
+I L V LL+T
Sbjct: 773 LQKSQLREIIKLQVALLET 791
>gi|422732388|ref|ZP_16788728.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0645]
gi|315161583|gb|EFU05600.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0645]
Length = 868
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
+V EIA+V +LTGIP + E+ M++ L KRV GQ++A+D + +A+ + +A
Sbjct: 533 SVTENEIAQVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
+ R LG FLF GP GK ELAKA+A +L+D+ D H++ DM Y E ++
Sbjct: 593 GLQ--DPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSED---HMVRIDMSEYMEKHAVS 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V++ PY++VL D+IEKA+ + N+LL++L D R
Sbjct: 648 RLVGAPPGYIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYE------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT++IMTS++ + + E + +V + FKP L +D
Sbjct: 706 KGWVVDFKNTVLIMTSNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDT 765
Query: 390 VVIDLAVPL-LDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQN 447
+ L PL LD + ++ + + R + + +++ + A IA N YG
Sbjct: 766 I---LFTPLSLDNVKGIIGKMTAQLAHRL--EQQEIVLEITDEAKTWIAENGYEPAYG-- 818
Query: 448 GEGLKRWM 455
LKR++
Sbjct: 819 ARPLKRFI 826
>gi|313894790|ref|ZP_07828350.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. oral taxon
137 str. F0430]
gi|312976471|gb|EFR41926.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. oral taxon
137 str. F0430]
Length = 857
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 19/249 (7%)
Query: 155 IDARVHGKFKEKLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDA 214
I A+ G+ K V E+IA V S+ TGIP + T E+ +R++ L +RV GQN+A
Sbjct: 519 IAAQSAGERMLKEEVGEEDIARVVSRWTGIPVTKMMTGEREKLLRLEDVLHERVVGQNEA 578
Query: 215 IDVIFEALTKPKAAKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIH 274
+ + EA+ + +A K R +G F+F GP GK ELAK +A L+ D++ +I
Sbjct: 579 VTAVSEAILRARAGIK--DPNRPIGSFIFLGPTGVGKTELAKTLAEALF---DDERSMIR 633
Query: 275 FDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLL 322
DM Y E S+ + L V++RPYSV+L D+IEKA+ + N+LL
Sbjct: 634 IDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHRDVFNVLL 693
Query: 323 KILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSL 382
+IL D R + NT+IIMTS+L ++ V + F+P
Sbjct: 694 QIL--DDGRLTDGKGRVVNFKNTVIIMTSNLGSHEILSKDYAEASAAVRALLKEYFRPEF 751
Query: 383 LKLLDKLVV 391
L +D +V
Sbjct: 752 LNRVDDTIV 760
>gi|284049288|ref|YP_003399627.1| ATP-dependent chaperone ClpB [Acidaminococcus fermentans DSM 20731]
gi|283953509|gb|ADB48312.1| ATP-dependent chaperone ClpB [Acidaminococcus fermentans DSM 20731]
Length = 847
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 195/407 (47%), Gaps = 46/407 (11%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+D AL A+ ++ N L ++ ID++ + R D ELD+ +
Sbjct: 353 HGVRIKDSALVAAATLSNRYINDRF--LPDKAIDLVDEAAARLRVEIDSMPTELDESRRR 410
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW--------LRQIDNELKDAF-FELVSFVKLR-MQVE 131
+ + +E + L KE+ D S L+ +++L D + E K+R ++ +
Sbjct: 411 MLQLQIEEQALSKEEDDASKARLEKIKEELAKLKSENDKLMDQWKAEKGGIAKIRQVKKD 470
Query: 132 YDDFVSCVHDAKRVKDYSKI-------LDQIDARVHGKFKE--------KLAVDVEEIAE 176
D+ + +A+R D +++ L ++ ++ KE K VD ++IA+
Sbjct: 471 MDNVKKEMEEAERSYDLNRLAELKYGKLPELQKQLAALEKEEHSDKRLLKEEVDEDDIAK 530
Query: 177 VASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLSSRR 236
V S TGIP + +++ + L KRV GQ++A++ + EA+ + +A K +
Sbjct: 531 VVSTWTGIPVNRLMEGEKKKLAHLPEILHKRVIGQDEAVEAVSEAVIRARAGIK--DPNK 588
Query: 237 QLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS---- 292
+G F+F GP GK ELAKA+A L+ +++ +I DM Y E ++ +
Sbjct: 589 PIGSFIFLGPTGVGKTELAKALAEVLF---NDEKSIIRIDMSEYMEKHTVSRLIGAPPGY 645
Query: 293 --------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTN 344
L V++ PYSV+LFD+IEKA+ + N+LL++L D R D N
Sbjct: 646 VGYEEGGQLTEAVRRHPYSVILFDEIEKAHPDVFNVLLQVL--DDGRLTDGQGRMVDFKN 703
Query: 345 TLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
TLIIMTS+L ++ E + V + F+P L +D +VV
Sbjct: 704 TLIIMTSNLGSHEIMEKKGAISKDEVRSMLMKFFRPEFLNRVDDIVV 750
>gi|150015534|ref|YP_001307788.1| ATPase [Clostridium beijerinckii NCIMB 8052]
gi|149901999|gb|ABR32832.1| ATPase AAA-2 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 863
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 195/415 (46%), Gaps = 55/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A++++ R + ++ ID++ + + D ELD +
Sbjct: 363 HGIRIHDSAIVAAAKLSD--RYIQDRYMPDKAIDLIDEAGAMIRSEIDSLPTELDVIRRK 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSF--------WLRQIDNELKDAFF---ELVSFVKLRMQV 130
+ + +E E L KE + S L++ ++E+ + E ++ +K ++
Sbjct: 421 IFKLEIEKEALSKEKDEGSKNRLDDLEKELAGLKEKNDEMTAKYTKEKEQITAIKT-LKS 479
Query: 131 EYDDFVSCVHDAKRVKDYSKILDQIDARVHG---KFKEKLA--------------VDVEE 173
E DD + A+R DY+K+ + +R+ K K+K V +E
Sbjct: 480 ELDDARGEIEVAQRNFDYNKVAEIQYSRIPAIEEKIKQKEIELRENYEGALLKEEVTEQE 539
Query: 174 IAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS 233
++ V SK TGIP + E+ +R++ + RV GQ +AI+ + A+ + +A K ++
Sbjct: 540 VSAVLSKWTGIPVTNLLEGEREKLLRLEDDMSNRVIGQGEAIEAVTNAILRARAGLKDIN 599
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G F+F GP GK ELAK +A L+D+ +N +I DM Y E S+ +
Sbjct: 600 --RPIGSFIFLGPTGVGKTELAKTLARNLFDSEEN---IIRIDMSEYMEKHSVSRLVGAP 654
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+LFD+IEKA+ + N+ L+IL D R D
Sbjct: 655 PGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQIL--DDGRLTDNKGKTVD 712
Query: 342 LTNTLIIMTSDLKDEQVYEV-----MLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT+IIMTS++ E + E + +V V S FKP L +D ++
Sbjct: 713 FKNTIIIMTSNIGSEYLLENTNEDHVDEEIKSKVMSVLKSRFKPEFLNRVDDTIM 767
>gi|406914738|gb|EKD53889.1| hypothetical protein ACD_60C00143G0031 [uncultured bacterium]
Length = 862
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 126/240 (52%), Gaps = 25/240 (10%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V EEIAEV SK T IP S +E+ + ++ L KR+ GQ+ A++ + A+ + +A
Sbjct: 531 VTEEEIAEVVSKWTHIPVSKMLESEKEKLLHMEDALHKRIIGQSQAVNAVCNAIRRSRA- 589
Query: 229 KKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
GLS +R +G FLF GP GK EL KA+A L+D + +I DM + E S+
Sbjct: 590 --GLSDPKRPIGSFLFLGPTGVGKTELCKALAAFLFDTEEA---VIRIDMSEFMEKHSVA 644
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L LV+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 645 RLVGAPPGYVGYEEGGYLTELVRRKPYSVILLDEMEKAHHDVFNILLQVL--DDGRLTDS 702
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE----VTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L E + ++ Y + E V G F+P L +D+ VV
Sbjct: 703 HGRTVDFRNTIIVMTSNLGSELIQDISKHGDYFEMKEAVLKVVGQHFRPEFLNRIDETVV 762
>gi|336312569|ref|ZP_08567517.1| ClpB protein [Shewanella sp. HN-41]
gi|335863813|gb|EGM68935.1| ClpB protein [Shewanella sp. HN-41]
Length = 857
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 27/237 (11%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP S E+ ++++ L +RV GQN+A+D + A+ + +A GL
Sbjct: 535 EIAEVLSKATGIPVSKMLEGEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R +G FLF GP GK EL K++A L+ D ++ L+ DM + E S+
Sbjct: 592 ADPNRPIGSFLFLGPTGVGKTELCKSLARFLF---DTESALVRIDMSEFMEKHSVSRLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGR-----VNEVTGSLFKPSLLKLLDKLVV 391
D NT+IIMTS+L + + E +YG +N VT S F+P L +D+ VV
Sbjct: 707 VDFRNTVIIMTSNLGSDIIQEGFGHVSYGEMKASVMNVVTHS-FRPEFLNRIDESVV 762
>gi|260771761|ref|ZP_05880679.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
gi|260613053|gb|EEX38254.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
Length = 838
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 197/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + +L ++ ID++ + D + LDK +
Sbjct: 342 HHVEITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRIQMDSKPEVLDKLERK 399
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKD----------------AFFELVSFVK 125
+ + +E + L E D S + + I++ELK+ A +K
Sbjct: 400 IIQLKIEQQALSNEHDDASEKRLGI--INDELKEKEREYSELEEIWNTEKAALSGTQHIK 457
Query: 126 LRM-QVEYD-DFVSCVHDAKRVKD--YSKILD---QIDARVHGKFKE----KLAVDVEEI 174
+ Q D + D R+ + Y +I + Q+D + +E + V EEI
Sbjct: 458 SALEQARLDLEVARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDEEI 517
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP + +E+ ++++ L +RV GQ++A++V+ +A+ + +A GLS
Sbjct: 518 AEVLSKQTGIPVAKMLEAEKEKLLQMETFLHQRVIGQSEAVEVVADAIRRSRA---GLSD 574
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+ +
Sbjct: 575 PNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDA---MVRIDMSEFMEKHSVARLVGAP 631
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V+++PYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 632 PGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVD 689
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L ++ E Y +V EV F+P L +D+ VV
Sbjct: 690 FRNTVVIMTSNLGSSRIQENFAHLDYQTMKEQVMEVVSKHFRPEFLNRIDESVV 743
>gi|428209571|ref|YP_007093924.1| ATP-dependent chaperone ClpB [Chroococcidiopsis thermalis PCC 7203]
gi|428011492|gb|AFY90055.1| ATP-dependent chaperone ClpB [Chroococcidiopsis thermalis PCC 7203]
Length = 875
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 34/241 (14%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
+IAEV SK TGIP S +E+ + ++ L RV GQN+A+ + +A+ + +A GL
Sbjct: 541 DIAEVISKWTGIPISKLVETEKEKLLNLEDELHHRVIGQNEAVTAVADAIQRSRA---GL 597
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ R + F+F GP GK ELAKA+A L+ D + L+ DM Y E ++
Sbjct: 598 ADPNRPIASFIFLGPTGVGKTELAKALAAYLF---DTEEALVRIDMSEYMEKHAVSRLIG 654
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++RPYSVVLFD+IEKA+ + N++L+IL D R
Sbjct: 655 APPGYVGYDEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQIL--DDGRVTDAQGHT 712
Query: 340 FDLTNTLIIMTSDL---------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT++IMTS++ D+ YE M GRV E + F+P L +D+++
Sbjct: 713 VDFKNTIVIMTSNIGSQYILDIAGDDSRYEEM----RGRVMEAMRNSFRPEFLNRIDEII 768
Query: 391 V 391
+
Sbjct: 769 I 769
>gi|160871680|ref|ZP_02061812.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|160872386|ref|ZP_02062518.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159120479|gb|EDP45817.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159121185|gb|EDP46523.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
Length = 868
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 61/417 (14%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D A+ A+ ++ R + L ++ ID++ + R D ++LD+
Sbjct: 362 HGVEIMDSAIVAAATLSH--RYISDRNLPDKAIDLIDEAASRIRIEIDSKPEKLDRLDRR 419
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL--------------KDAFFELVSFVKLR 127
L + +E E L KE TD SS+ L+ +DNE+ K L K++
Sbjct: 420 LIQLKIEREALKKE-TDESSK-IRLKNLDNEITELSKKYADLNEIWKAEKATLQGEQKIK 477
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA----------------VDV 171
++E F + A+R D +++ + + K+ +A V
Sbjct: 478 SELEKAQF--ELEKARRSGDLNRMSELQYGHIPALEKKLVAAQKIEKKEQPALIRNKVSE 535
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
+EIAE+ S+ TGIP + E+ ++++ L KRV GQ++AI V+ A+ + +A G
Sbjct: 536 KEIAEIVSQWTGIPVAKMLEGEREKLLQMEDALHKRVVGQDEAISVVANAIRRSRA---G 592
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G F+F+GP GK E+ KA+A L+ D+D ++ DM + E S+
Sbjct: 593 LSDPNRPIGSFIFSGPTGVGKTEVCKALAGFLF---DSDEAMVRLDMSEFMEKHSVARLI 649
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V+++PYSVVL D+IEKA++ + N+LL++L+ D + G
Sbjct: 650 GAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEIEKAHADVFNILLQVLE-DGRLTDSHG-R 707
Query: 339 AFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
D NT+I+MTS+L + + E Y + ++ F+P + +D++VV
Sbjct: 708 TVDFRNTVIVMTSNLGSQIIQEFTSKQDYAALKSTLMDIIAQHFRPEFINRVDEVVV 764
>gi|422674213|ref|ZP_16733568.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
M302273]
gi|330971942|gb|EGH72008.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 854
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S ++ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|297180993|gb|ADI17195.1| hypothetical protein [uncultured Rhodobacterales bacterium
HF0070_10D05]
Length = 872
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 134/250 (53%), Gaps = 35/250 (14%)
Query: 166 KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
K AV +E+IA+V + TG+P S E+ ++++ L+ RV GQ +A+ V+ A+ +
Sbjct: 527 KEAVALEQIAQVVERWTGVPTSKMLEGEREKLLKMEDHLEARVVGQEEAVHVLANAVRR- 585
Query: 226 KAAKKGLSSRRQ-LGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELE 284
A+ GL+ +Q LG FLF GP GK EL KAIA L+ D+DN ++ DM Y E
Sbjct: 586 --ARAGLNDEKQPLGSFLFLGPTGVGKTELTKAIAEFLF---DDDNAMVRIDMSEYMEKH 640
Query: 285 SIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILK----TD 328
S+ + L V++RPY VVLFD++EKA+ + NLLL++L TD
Sbjct: 641 SVSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNLLLQVLDDGILTD 700
Query: 329 FNRKATRGIAAFDLTNTLIIMTSD-----LKDEQVYEVMLTATYGRVNEVTGSLFKPSLL 383
+ + D T+II+TS+ L D + ++ + TA V + S FKP +
Sbjct: 701 GHGRVV------DFKQTIIILTSNLGAQALSDPKTFQNVETAK-ANVMDAVRSHFKPEFI 753
Query: 384 KLLDKLVVID 393
LD++++ +
Sbjct: 754 NRLDEIIIFN 763
>gi|260771107|ref|ZP_05880034.1| ClpB protein [Vibrio furnissii CIP 102972]
gi|260613704|gb|EEX38896.1| ClpB protein [Vibrio furnissii CIP 102972]
Length = 857
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP + +E+ +R++ L +RV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVAKMLEAEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSED---AMVRIDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E + Y +V EV F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFASLDYQGIKEQVMEVVSKHFRPEFLNRVDETVV 762
>gi|300780363|ref|ZP_07090219.1| chaperone protein ClpB [Corynebacterium genitalium ATCC 33030]
gi|300534473|gb|EFK55532.1| chaperone protein ClpB [Corynebacterium genitalium ATCC 33030]
Length = 884
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 200/414 (48%), Gaps = 65/414 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++IQD AL A+ ++ R L ++ ID++ + R D +E+D+ +
Sbjct: 363 HGVRIQDSALVAAASLSD--RYITNRFLPDKAIDLVDEAGSRLRMEIDSSPQEIDELERV 420
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHD 141
+RR +E L KE +D +SR L + EL D E + +K R + E + H
Sbjct: 421 VRRLEIEEIALEKE-SDAASRE-RLDALRQELADQR-EKLGEMKARWENEKSEIDKVQHA 477
Query: 142 -------------AKRVKDYSKI-------LDQIDARVHGK---------FKEKLAVDVE 172
A+R D++K+ + +++A+V E++ DV
Sbjct: 478 KEELEDLRNQSEIAERDGDFAKVSELRYGRIPELEAQVEAAEASASEKTMLAEEVTPDV- 536
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IA+V S TGIPA E+ + ++ L RV GQ++A++ + +A+ + +A G+
Sbjct: 537 -IADVVSSWTGIPAGKMMEGETEKLLHMESVLGGRVVGQHEAVNAVSDAVRRSRA---GI 592
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF-- 289
+ R +G FLF GP GK ELAK++A L+D+ ++ +I DM Y E S+
Sbjct: 593 ADPNRPIGSFLFLGPTGVGKTELAKSLAEFLFDD---ESAMIRIDMSEYGEKHSVARLVG 649
Query: 290 -------FDS---LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
FD+ L V++RPYS+VLFD++EKA+ + ++LL++L D R
Sbjct: 650 APPGYVGFDAGGQLTEAVRRRPYSLVLFDEVEKAHPDVFDVLLQVL--DEGRLTDGQGRT 707
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVVID 393
D NT+II+TS+L + + ++ E FKP + LD +VV D
Sbjct: 708 VDFRNTVIILTSNLGAGGLRDEIM--------EAVKRAFKPEFINRLDDVVVFD 753
>gi|403383536|ref|ZP_10925593.1| chaperone clpB [Kurthia sp. JC30]
Length = 712
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 196/415 (47%), Gaps = 57/415 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGE--LRERFIDILLKGIKRCLNSRDKYQKELDKHK 79
H ++I D A+ A+ ++ N+ E L ++ ID++ + D +ELD+
Sbjct: 214 HAVKIHDRAIVAAAELS----NRYLTERFLPDKAIDLIDEACAMIRTEIDSMPQELDEVT 269
Query: 80 YFLRRAVVEYEQLVKEDTDHSS--RSFWLRQIDNELKD--------------AFFELVSF 123
+ +E + L+KE TD +S R LR+ NELK A + +
Sbjct: 270 RRQMQLEIEEQALMKE-TDAASEKRLENLRKELNELKSSSQSMKDQWTQEKQALQNIQAK 328
Query: 124 VKL---------RMQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKEKLA---VDV 171
+L + + EYD + V + K L+ ++ ++ + +L V
Sbjct: 329 RELLDQKRNELEKAEAEYDLNKAAVLRHGEIPQLKKELEALEQQLTATGETRLLREDVTS 388
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
+EIA + S+ TG+P + E+ + + L KRV GQ+DA+ ++ EA+ + +A +
Sbjct: 389 DEIATIVSRWTGVPVTKMLQSEREKLLALGDILHKRVIGQDDAVKLVTEAVWRARAGIQ- 447
Query: 232 LSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
+ +G FLF GP GK ELAKA+A +L+D+ D H I DM Y E S+
Sbjct: 448 -DPNKPIGSFLFLGPTGVGKTELAKALAEQLFDSED---HFIRIDMSEYMEKHSVSRLVG 503
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L +++ PY+VVL D+IEKA+ + N+LL+IL D R
Sbjct: 504 APPGYVGYEEGGQLTEQIRRNPYAVVLLDEIEKAHPDVANILLQIL--DDGRITDGQGRT 561
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL---FKPSLLKLLDKLVV 391
+ TNT++IMTS+L + E+ + + + V L FKP LL LD +++
Sbjct: 562 VNFTNTVVIMTSNLGSHYLLEMNESNEHATEDLVMAELKQHFKPELLNRLDDIIM 616
>gi|451822903|ref|YP_007459177.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775703|gb|AGF46744.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 865
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 130/248 (52%), Gaps = 27/248 (10%)
Query: 162 KFKE-KLAVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFE 220
KFK ++ V EEIAEV S+ TGIP S E+ + + L RV GQN+A+ + +
Sbjct: 529 KFKLLRIQVGAEEIAEVVSRATGIPVSKMMKGEREKLLHLNDFLSSRVVGQNEAVQAVSD 588
Query: 221 ALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGN 279
A+ + +A GLS S R G FLF GP GK ELA+A+ ++D++D H+I DM
Sbjct: 589 AILRSRA---GLSDSARPSGSFLFLGPTGVGKTELARALTEFMFDSSD---HIIRVDMSE 642
Query: 280 YTELESIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKT 327
+ E S+ + L V+++PY V+L D+IEKA+ + N+LL++L
Sbjct: 643 FMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNILLQVL-- 700
Query: 328 DFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVT----GSLFKPSLL 383
D R D N++IIMTS+L ++ + M TY V EV + +P L
Sbjct: 701 DDGRLTDGQGRTVDFRNSVIIMTSNLGSSEI-QNMHEKTYEDVREVVLEKLKQVLRPEFL 759
Query: 384 KLLDKLVV 391
+D +VV
Sbjct: 760 NRIDDIVV 767
>gi|334706239|ref|ZP_08522105.1| ATP-dependent chaperone protein ClpB [Aeromonas caviae Ae398]
Length = 857
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 192/413 (46%), Gaps = 54/413 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H +QI D A+ A++++ R A +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVQITDPAIVAAAQLSH--RYIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQID--------NELKD------AFFELVSFVKLR 127
+ + +E + L+KED D S + L + NEL++ A +K
Sbjct: 419 IIQLKLEQQALMKEDDDASRKRLDLLNQELTEKEREYNELEEVWKAEKAALAGTQHIKAA 478
Query: 128 MQVEYDDFVSC--VHDAKRVKD--YSKILD---QIDARVHGKFKE-----KLAVDVEEIA 175
++ D D R+ + Y +I + Q+D + +E DVE IA
Sbjct: 479 LEQARQDLEVARRAGDLGRMSELQYGRIPELEKQLDLATQAEMQETSLLRNRVTDVE-IA 537
Query: 176 EVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-S 234
+V ++ TGIP + E+ +R++ +L RV GQ +A+D + A+ + +A GLS
Sbjct: 538 DVLARWTGIPVARMLEGEREKLLRMEDQLHSRVIGQEEAVDAVSNAIRRSRA---GLSDP 594
Query: 235 RRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS-- 292
R +G FLF GP GK EL KA+A L+D D ++ DM + E S+ +
Sbjct: 595 NRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDA---MVRIDMSEFMEKHSVARLVGAPP 651
Query: 293 ----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFDL 342
L V++RPYSV+L D++EKA+ + N+LL++L D R D
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRTVDF 709
Query: 343 TNTLIIMTSDLKDEQVYEVMLTATYGRVN----EVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L + + E Y + EV F+P + +D+ VV
Sbjct: 710 RNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMEVLTRSFRPEFINRIDETVV 762
>gi|375130115|ref|YP_004992214.1| clpB protein [Vibrio furnissii NCTC 11218]
gi|315179288|gb|ADT86202.1| clpB protein [Vibrio furnissii NCTC 11218]
Length = 857
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV SK TGIP + +E+ +R++ L +RV GQ +A++V+ A+ + +A GL
Sbjct: 535 EIAEVLSKQTGIPVAKMLEAEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRA---GL 591
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R +G FLF GP GK EL K +AN ++D+ D ++ DM + E S+
Sbjct: 592 SDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSED---AMVRIDMSEFMEKHSVARLVG 648
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSV+L D++EKA+ + N+LL++L D R
Sbjct: 649 APPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL--DDGRLTDGQGRT 706
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYG----RVNEVTGSLFKPSLLKLLDKLVV 391
D NT++IMTS+L ++ E + Y +V EV F+P L +D+ VV
Sbjct: 707 VDFRNTVVIMTSNLGSSRIQENFASLDYQGIKEQVMEVVSKHFRPEFLNRVDETVV 762
>gi|66043993|ref|YP_233834.1| ATPase AAA [Pseudomonas syringae pv. syringae B728a]
gi|63254700|gb|AAY35796.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Pseudomonas syringae pv. syringae B728a]
Length = 854
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S ++ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYS++L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + G+ F+P + +D++V+ +
Sbjct: 736 RAAVMDAVGTHFRPEFVNRIDEVVIFE 762
>gi|28868056|ref|NP_790675.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213971039|ref|ZP_03399159.1| clpB protein [Pseudomonas syringae pv. tomato T1]
gi|301384237|ref|ZP_07232655.1| clpB protein [Pseudomonas syringae pv. tomato Max13]
gi|302059470|ref|ZP_07251011.1| clpB protein [Pseudomonas syringae pv. tomato K40]
gi|302134988|ref|ZP_07260978.1| clpB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422296834|ref|ZP_16384494.1| clpB protein [Pseudomonas avellanae BPIC 631]
gi|422591482|ref|ZP_16666125.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422659776|ref|ZP_16722198.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|54035835|sp|Q889C2.1|CLPB_PSESM RecName: Full=Chaperone protein ClpB
gi|28851292|gb|AAO54370.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213924147|gb|EEB57722.1| clpB protein [Pseudomonas syringae pv. tomato T1]
gi|330878991|gb|EGH13140.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|331018391|gb|EGH98447.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
gi|407991919|gb|EKG33653.1| clpB protein [Pseudomonas avellanae BPIC 631]
Length = 854
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 139/267 (52%), Gaps = 28/267 (10%)
Query: 145 VKDYSKILDQIDARVHGKFKEKL---AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQ 201
+ D + L +D HGK + +L V EEIAEV SK TGIP S E+ +R++
Sbjct: 506 IPDLERSLQMVDQ--HGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRME 563
Query: 202 GRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIAN 260
L RV GQ +A+ + A+ + +A GLS R G F+F GP GK EL KA+A
Sbjct: 564 TLLHNRVIGQEEAVVAVSNAVRRSRA---GLSDPNRPSGSFMFLGPTGVGKTELCKALAE 620
Query: 261 ELYDNNDNDNHLIHFDMGNYTELESIKHFFDS------------LAALVKKRPYSVVLFD 308
L+ D + ++ DM + E S+ + L V+++PYSV+L D
Sbjct: 621 FLF---DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLD 677
Query: 309 KIEKANSSILNLLLKILKTDFNRKATRGIAAFDLTNTLIIMTSDLKDEQVYEVM--LTAT 366
++EKA+S + N+LL++L+ D + G D NT+I+MTS+L Q+ E++ A
Sbjct: 678 EVEKAHSDVFNILLQVLE-DGRLTDSHG-RTVDFRNTVIVMTSNLGSAQIQELVGDREAQ 735
Query: 367 YGRVNEVTGSLFKPSLLKLLDKLVVID 393
V + + F+P + +D++V+ +
Sbjct: 736 RAAVMDAVSTHFRPEFVNRIDEVVIFE 762
>gi|91978556|ref|YP_571215.1| ATPase [Rhodopseudomonas palustris BisB5]
gi|91685012|gb|ABE41314.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB5]
Length = 879
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 193/419 (46%), Gaps = 61/419 (14%)
Query: 19 EKIHRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKH 78
E+ H ++I D AL A ++ R L ++ ID++ + R D +ELD
Sbjct: 360 EQHHGVRISDSALVAAVTLSN--RYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSM 417
Query: 79 KYFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFV--------KL---- 126
+ R +E E L KE TD SR+ L ++ EL D + + KL
Sbjct: 418 DREIVRLKIEQEALKKE-TDTGSRT-RLVTLEKELADLEEKSAALTARWSAEKNKLSDAQ 475
Query: 127 RMQVEYDDFVSCVHDAKRVKDYS--------------KILDQIDARVHGKFKEKLAVDVE 172
+++ E D + DA+R +Y K L I+A + + AV
Sbjct: 476 KLKSELDGLRLELADAQRRGEYQRAGELAYGRIPELEKKLADIEANENAGEMMEEAVTAN 535
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
IA+V S+ TG+P +E+ +R++ ++ KRV GQ +A+ + A+ + +A +
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLRMEDQIGKRVVGQFEAVHAVSTAVRRARAGLQ-- 593
Query: 233 SSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHF--- 289
R +G F+F GP GK EL KA+A L+ D++ ++ DM Y E S+
Sbjct: 594 DPNRPMGSFMFLGPTGVGKTELTKALAQYLF---DDETAMVRLDMSEYMEKHSVSRLIGA 650
Query: 290 ------FDSLAAL---VKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAF 340
+D AL V++RPY VVLFD+IEKA+ + N+LL++L D R
Sbjct: 651 PPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVL--DDGRLTDGQGRTV 708
Query: 341 DLTNTLIIMTSDLKDEQVY--------EVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
D NTLI+MTS+L E + EV+ G V F+P L +D++++
Sbjct: 709 DFRNTLIVMTSNLGSEYLVNQPEGEDTEVVREQVIGMVR----GHFRPEFLNRVDEIIL 763
>gi|310659286|ref|YP_003937007.1| protein disaggregation chaperone [[Clostridium] sticklandii]
gi|308826064|emb|CBH22102.1| protein disaggregation chaperone [[Clostridium] sticklandii]
Length = 864
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 230/489 (47%), Gaps = 80/489 (16%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGE--LRERFIDILLKGIKRCLNSRDKYQKELDKHK 79
H ++I D A+ + ++ NK + L ++ ID++ + D ELD
Sbjct: 363 HGVRITDNAIIACAVLS----NKYISDRFLPDKAIDLMDEAASMIRTEIDSMPTELDAIS 418
Query: 80 YFLRRAVVEYEQLVKEDTDHSSRSFWLRQIDNEL---KDAFFELVS--------FVKLR- 127
+ + +E +Q +K++TD SS++ L + EL K+ + + S +K++
Sbjct: 419 RKIMQMEIE-QQALKKETDTSSKA-RLEDLQKELAILKEQYSSMKSQWELEKENIIKIKD 476
Query: 128 MQVEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE--------------------KL 167
+Q E + + DA+R D L+++ HGK E K
Sbjct: 477 LQKEIEQTRHKIEDAERRYD----LEELAMLKHGKLPELEKKLESERENQAKSKAQLLKE 532
Query: 168 AVDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKA 227
V +EIAE+ SK TGIP + E+ + + L RV GQ++A+D++ +A+ + +A
Sbjct: 533 EVTEDEIAEIISKWTGIPVTKLVESEREKLLHLPSLLHNRVIGQDEAVDLVADAVLRARA 592
Query: 228 AKKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIK 287
K RR +G F+F GP GK ELAKA+A L+D +N ++ DM Y E ++
Sbjct: 593 GLK--DPRRPIGSFIFLGPTGVGKTELAKALAQALFDTEEN---IVRIDMSEYQEKHTVA 647
Query: 288 HFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATR 335
+ L V+++PYSV+LFD+IEKA+ + N LL++L D R
Sbjct: 648 RLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNTLLQLL--DDGRLTDS 705
Query: 336 GIAAFDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNE-----VTGSL---FKPSLLKLLD 387
+ +T++IMTS++ + + M + G +++ V +L FKP L +D
Sbjct: 706 KGKTVNFKDTVVIMTSNIGSNLLLDGMQES--GEISDAVKENVLNTLRANFKPEFLNRID 763
Query: 388 KLVVIDLAVPLLDTTRLLLREWACEETKRRNNDSKAVIVCPSTSALVHIASNAARK-YGQ 446
+V+ PL + + + E + + + R +D + + + S A IA N+ K YG
Sbjct: 764 DIVMFK---PLTKSEIVKIVELSLVDIQNRLSD-RNIKLEVSDDAKNFIADNSYSKVYG- 818
Query: 447 NGEGLKRWM 455
+KR++
Sbjct: 819 -ARPVKRYL 826
>gi|339441090|ref|YP_004707095.1| hypothetical protein CXIVA_00260 [Clostridium sp. SY8519]
gi|338900491|dbj|BAK45993.1| hypothetical protein CXIVA_00260 [Clostridium sp. SY8519]
Length = 864
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 128/242 (52%), Gaps = 27/242 (11%)
Query: 169 VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAA 228
V +EIA + S+ TGIP + + + + L KRV GQ+DA+ + EA+ + KA
Sbjct: 531 VSEDEIARIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDDAVTKVTEAIIRSKAG 590
Query: 229 KKGLSSRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKH 288
K + +G FLF GP GK ELAKA+A L+ D++N+++ DM Y E S+
Sbjct: 591 IK--DPTKPIGSFLFLGPTGVGKTELAKALAANLF---DDENNMVRLDMTEYMEKFSVSR 645
Query: 289 FFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRG 336
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 646 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVL--DDGRITDSQ 703
Query: 337 IAAFDLTNTLIIMTSDLKDEQVYE-------VMLTATYGRVNEVTGSLFKPSLLKLLDKL 389
D NT+IIMTS+L + + E + A +NE+ G+ F+P L LD++
Sbjct: 704 GRTVDFKNTIIIMTSNLGSQHLLEGIDANGNINPEAEARVMNELKGN-FRPEFLNRLDEI 762
Query: 390 VV 391
++
Sbjct: 763 IM 764
>gi|320535562|ref|ZP_08035662.1| ATP-dependent chaperone protein ClpB [Treponema phagedenis F0421]
gi|320147623|gb|EFW39139.1| ATP-dependent chaperone protein ClpB [Treponema phagedenis F0421]
Length = 860
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 204/426 (47%), Gaps = 75/426 (17%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I+DEAL A+ ++ R L ++ ID++ + R + ELDK +
Sbjct: 361 HGVRIKDEALVAAAVLSN--RYITNRFLPDKAIDLVDEAASRLKMEIESQPVELDKVERK 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKLRMQVEYDDFVSCVHD 141
+ + +E L KE TD +S+ L +++ EL + +S V+ MQ ++ + S + +
Sbjct: 419 ILQLNIEKVSLSKE-TDPASKE-RLTKLEKELAE-----LSEVRSAMQAQWQNEKSKIEE 471
Query: 142 AKRVKD-------------------------YSKI--LDQIDARVHGKFKEKLA------ 168
++ K+ Y KI L++ V + ++K
Sbjct: 472 SRAYKEELEQLRFEETKYTREGNLNKAAELRYGKIPELEKKIVAVTAELEKKAGSEGQLL 531
Query: 169 ---VDVEEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKP 225
V E+IA++ S TGIP + +++Y+ ++ LKKRV GQ++A+ VI +A+ +
Sbjct: 532 REEVSEEDIAKIISVWTGIPVAKMMASEQQKYLDLENALKKRVVGQDEAVTVIADAIRRN 591
Query: 226 KAAKKGLS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELE 284
KA GLS + + LG LF GP GK ELA+ +A L+ +++ L DM Y E
Sbjct: 592 KA---GLSDANKPLGSLLFLGPTGVGKTELARTLAEFLF---NDEKALTRIDMSEYMEKH 645
Query: 285 SIKHFFDS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRK 332
S+ + L V++RPYSV+LFD+IEKAN + N+ L+IL D R
Sbjct: 646 SVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKANQDVFNIFLQIL--DDGRL 703
Query: 333 ATRGIAAFDLTNTLIIMTSDLKDEQVYEVMLTAT-----YGRVNEVTGSLFKPSLLKLLD 387
D NT+IIMTS++ E + LTA ++ E+ F+P L +D
Sbjct: 704 TDGQGRLIDFKNTIIIMTSNIGSEYI----LTANNMQDIQPQIKEILHQSFRPEFLNRID 759
Query: 388 KLVVID 393
+++ +
Sbjct: 760 EVLTFN 765
>gi|68249453|ref|YP_248565.1| ClpB [Haemophilus influenzae 86-028NP]
gi|386266414|ref|YP_005829906.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2846]
gi|68057652|gb|AAX87905.1| ClpB [Haemophilus influenzae 86-028NP]
gi|309973650|gb|ADO96851.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
R2846]
Length = 856
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 193/418 (46%), Gaps = 65/418 (15%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H + I D A+ A+ ++ R + +L ++ ID++ + D + LD+ +
Sbjct: 361 HHVDITDPAIVAAATLSH--RYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFWLRQIDNELKDAFFELVSFVKL------------RMQ 129
+ + +E + L KE+ D +SR L ++ EL + E ++ ++
Sbjct: 419 IIQLKLEQQALQKEE-DEASRK-RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIK 476
Query: 130 VEYDDFVSCVHDAKRVKDYSKILDQIDARVHGKFKE---------------KLAVDVEEI 174
E D + + A+R D +K+ + R+ K+ + V EEI
Sbjct: 477 QELDTAKTELEQARRAGDLAKMSELQYGRIPALEKQLEQAETSEGKEMTLLRYRVTDEEI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A GLS
Sbjct: 537 AEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLVGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL++L D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLVV 391
NT++IMTS+L KDE E+ V V F+P + +D+ VV
Sbjct: 709 FRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETVV 761
>gi|145636576|ref|ZP_01792243.1| ClpB [Haemophilus influenzae PittHH]
gi|145270102|gb|EDK10038.1| ClpB [Haemophilus influenzae PittHH]
Length = 856
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 34/241 (14%)
Query: 172 EEIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKG 231
EEIAEV SK TGIP S +E+ +R++ L KRV GQ +A+D + A+ + +A G
Sbjct: 534 EEIAEVLSKATGIPVSKMMEGEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRA---G 590
Query: 232 LS-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFF 290
LS R +G FLF GP GK EL K +A L+D+ D ++ DM + E S+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSED---AMVRIDMSEFMEKHSVSRLV 647
Query: 291 DS------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIA 338
+ L V++RPYSV+L D++EKA++ + N+LL++L D R
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVL--DDGRLTDGQGR 705
Query: 339 AFDLTNTLIIMTSDL--------KDEQVYEVMLTATYGRVNEVTGSLFKPSLLKLLDKLV 390
D NT++IMTS+L KDE E+ V V F+P + +D+ V
Sbjct: 706 TVDFRNTVVIMTSNLGSDLIQGNKDESYSEM-----KALVMSVVSQHFRPEFINRIDETV 760
Query: 391 V 391
V
Sbjct: 761 V 761
>gi|406039852|ref|ZP_11047207.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 859
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 124/236 (52%), Gaps = 25/236 (10%)
Query: 173 EIAEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGL 232
EIAEV S TGIP + E+ + ++ L RV GQ++A+ + A+ + +A GL
Sbjct: 533 EIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHNRVVGQDEAVVAVSNAVRRSRA---GL 589
Query: 233 S-SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFD 291
S R G FLF GP GK EL KA+AN L+D++D +I DM + E S+
Sbjct: 590 SDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDD---AMIRIDMSEFMEKHSVSRLVG 646
Query: 292 S------------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAA 339
+ L V+++PYSVVLFD++EKA+ + N+LL++L D R
Sbjct: 647 APPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVL--DDGRLTDSQGRV 704
Query: 340 FDLTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
D NT+I+MTS+L + V E+ AT V V S F+P + +D+LVV
Sbjct: 705 IDFKNTVIVMTSNLGSQDVRELGEGATDDEVRAVVMSAVSQHFRPEFINRIDELVV 760
>gi|397664204|ref|YP_006505742.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395127615|emb|CCD05814.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 196/414 (47%), Gaps = 56/414 (13%)
Query: 22 HRLQIQDEALFLASRIAQHPRNKATGELRERFIDILLKGIKRCLNSRDKYQKELDKHKYF 81
H ++I D AL A+ ++ R + +L ++ ID++ + D + +DK +
Sbjct: 361 HGVEITDPALVAAATLSH--RYISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERR 418
Query: 82 LRRAVVEYEQLVKEDTDHSSRSFW-LRQIDNELKDAFFELVSFVK---------LRMQVE 131
L + +E E L KE+ + S + L++ +EL+ ++ +L K +++
Sbjct: 419 LIQLKIEREALKKENDEASKKRLVDLQKSIDELEQSYSDLEEIWKAEKATMQGSTQIKEA 478
Query: 132 YDDFVSCVHDAKRVKDYSKI-----------------LDQIDARVHGKFKEKLAVDVEEI 174
+ + A+R D S++ + +DA + K+ D EI
Sbjct: 479 LEQAKLEMETARRAGDLSRMSELQYGRIPELEKRLSQVSSVDAMETKLVRNKVTED--EI 536
Query: 175 AEVASKLTGIPASWFCTKPEERYMRVQGRLKKRVFGQNDAIDVIFEALTKPKAAKKGLS- 233
AEV SK TGIP S +E+ ++++ L R+ GQN+A+D + A+ + +A GLS
Sbjct: 537 AEVVSKWTGIPVSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRA---GLSD 593
Query: 234 SRRQLGLFLFAGPNCSGKAELAKAIANELYDNNDNDNHLIHFDMGNYTELESIKHFFDS- 292
R +G FLF GP GK EL KA+A+ L+ D + ++ DM + E S+ +
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALASFLF---DTEEAMVRIDMSEFMEKHSVARLIGAP 650
Query: 293 -----------LAALVKKRPYSVVLFDKIEKANSSILNLLLKILKTDFNRKATRGIAAFD 341
L V++RPYSV+L D++EKA++ + N+LL+++ D R D
Sbjct: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVM--DDGRLTDGQGRTVD 708
Query: 342 LTNTLIIMTSDLKDEQVYEVMLTATYGRVNEVTGSL----FKPSLLKLLDKLVV 391
NT+I+MTS+L + + E+ Y + L F+P + +D+ VV
Sbjct: 709 FRNTVIVMTSNLGSQLIQEMSSKFNYNEIKAAVMDLVSQHFRPEFINRIDESVV 762
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,125,314,919
Number of Sequences: 23463169
Number of extensions: 340948862
Number of successful extensions: 1376172
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8283
Number of HSP's successfully gapped in prelim test: 4516
Number of HSP's that attempted gapping in prelim test: 1331157
Number of HSP's gapped (non-prelim): 16037
length of query: 550
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 402
effective length of database: 8,886,646,355
effective search space: 3572431834710
effective search space used: 3572431834710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)