Query 036636
Match_columns 341
No_of_seqs 145 out of 1138
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:05:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036636.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036636hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 6E-62 2E-66 460.6 26.7 324 1-336 23-400 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 6.8E-59 2.3E-63 439.7 27.2 327 1-339 24-397 (403)
3 1tzs_A Cathepsin E; hydrolase, 100.0 8.7E-56 3E-60 411.3 27.6 289 1-339 26-346 (351)
4 2x0b_A Renin; hydrolase-hormon 100.0 1.4E-56 4.7E-61 419.7 21.3 286 1-335 64-383 (383)
5 3psg_A Pepsinogen; hydrolase(a 100.0 6E-56 2.1E-60 414.4 23.1 282 1-335 59-370 (370)
6 1t6e_X Xylanase inhibitor; two 100.0 2.3E-55 7.9E-60 412.6 26.2 310 1-336 17-374 (381)
7 3fv3_A SAPP1P-secreted asparti 100.0 2.5E-55 8.6E-60 406.6 25.0 280 1-339 15-333 (339)
8 1am5_A Pepsin, acid proteinase 100.0 3.9E-55 1.3E-59 402.7 24.6 280 1-335 15-324 (324)
9 1j71_A Candidapepsin, aspartic 100.0 3.1E-55 1.1E-59 404.9 23.8 288 1-339 15-328 (334)
10 1mpp_A Pepsin; hydrolase(acid 100.0 3.1E-55 1.1E-59 409.2 23.3 290 1-339 21-359 (361)
11 3cms_A Chymosin B; hydrolase, 100.0 2.4E-55 8.1E-60 403.9 22.0 281 1-335 17-323 (323)
12 2qzx_A Candidapepsin-5; aspart 100.0 4.7E-55 1.6E-59 405.1 23.5 280 1-339 15-335 (342)
13 1htr_B Gastricsin; aspartyl pr 100.0 4.2E-55 1.4E-59 403.3 23.0 284 1-335 15-329 (329)
14 3c9x_A Trichoderma reesei aspa 100.0 5.4E-55 1.9E-59 402.4 23.3 283 1-334 18-329 (329)
15 4aa9_A Chymosin; hydrolase, as 100.0 2.5E-55 8.6E-60 403.4 20.7 281 1-335 14-320 (320)
16 2apr_A Rhizopuspepsin; hydrola 100.0 9.9E-55 3.4E-59 400.0 23.5 282 1-335 18-324 (325)
17 1dpj_A Proteinase A; proteinas 100.0 1.3E-54 4.5E-59 400.0 24.4 284 1-335 16-329 (329)
18 2ewy_A Beta-secretase 2; BACE2 100.0 3.5E-54 1.2E-58 405.3 26.6 304 1-339 16-359 (383)
19 1oew_A Endothiapepsin; hydrola 100.0 1.1E-54 3.9E-59 400.3 21.8 283 1-334 18-329 (329)
20 3pvk_A Candidapepsin-2; hydrol 100.0 2.8E-54 9.7E-59 400.0 23.3 281 1-339 15-335 (342)
21 3vf3_A Beta-secretase 1; struc 100.0 9.5E-54 3.2E-58 404.7 24.9 305 1-339 31-378 (402)
22 2qp8_A Beta-secretase 1; BACE1 100.0 4.5E-54 1.6E-58 405.9 20.9 302 1-339 24-371 (395)
23 3k1w_A Renin; protease, altern 100.0 5.1E-54 1.7E-58 398.1 20.3 286 1-335 21-340 (341)
24 1miq_A Plasmepsin; aspartic pr 100.0 5.2E-54 1.8E-58 402.0 20.0 276 2-335 66-374 (375)
25 1wkr_A Polyporopepsin; hydrola 100.0 1.8E-53 6.1E-58 394.2 23.3 286 1-340 15-338 (340)
26 3lpj_A Beta-secretase 1; alzhe 100.0 1.8E-53 6.3E-58 408.5 22.8 306 1-340 77-425 (455)
27 1qdm_A Prophytepsin; aspartic 100.0 4.6E-53 1.6E-57 406.1 24.1 298 1-335 55-478 (478)
28 1ibq_A Aspergillopepsin; aspar 100.0 1.1E-52 3.7E-57 386.4 22.9 280 1-335 17-325 (325)
29 1izd_A Aspartic proteinase; su 100.0 1.4E-52 4.6E-57 385.4 21.5 279 1-335 18-323 (323)
30 1yg9_A Aspartic protease BLA G 100.0 8.6E-53 2.9E-57 387.8 20.1 287 1-335 20-329 (330)
31 2bju_A Plasmepsin II; aspartic 100.0 8E-53 2.7E-57 400.6 18.7 278 1-335 141-450 (453)
32 3qvc_A Histo-aspartic protease 100.0 1.1E-52 3.6E-57 400.2 19.5 277 1-335 140-449 (451)
33 1bxo_A Protein (penicillopepsi 100.0 1.9E-52 6.5E-57 384.5 19.5 278 1-335 18-323 (323)
34 1b5f_A Protein (cardosin A); h 100.0 5.9E-40 2E-44 288.5 17.2 201 1-237 16-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.2E-38 4.2E-43 280.7 19.1 220 88-335 4-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 2.7E-18 9.2E-23 128.2 8.6 63 1-79 16-94 (97)
37 1b5f_B Protein (cardosin A); h 99.7 9.8E-18 3.4E-22 123.0 5.7 76 255-335 5-87 (87)
38 2i1a_A DNA damage-inducible pr 95.2 0.055 1.9E-06 42.6 7.3 28 306-333 108-135 (148)
39 3s8i_A Protein DDI1 homolog 1; 94.2 0.092 3.2E-06 41.4 6.2 30 305-334 106-135 (148)
40 2i1a_A DNA damage-inducible pr 91.4 0.62 2.1E-05 36.3 7.3 23 2-26 29-51 (148)
41 3s8i_A Protein DDI1 homolog 1; 81.9 3.7 0.00013 32.0 6.6 23 2-26 27-49 (148)
42 2hs1_A HIV-1 protease; ultra-h 80.1 1.3 4.3E-05 32.1 3.0 24 1-26 10-33 (99)
43 1fmb_A EIAV protease; hydrolas 79.6 1.2 4E-05 32.7 2.7 24 1-26 10-33 (104)
44 3liy_A Protease; hydrolase, hy 76.9 1.6 5.4E-05 32.3 2.7 26 1-26 12-40 (116)
45 3ec0_A Protease; HIV-2, inhibi 73.8 2.2 7.5E-05 30.8 2.7 24 1-26 10-33 (99)
46 2hah_A Protease, retropepsin; 68.2 3 0.0001 31.1 2.5 21 4-26 18-38 (116)
47 1lya_A Cathepsin D; lysosomal 64.8 5.6 0.00019 28.4 3.4 16 211-226 29-44 (97)
48 3sqf_A Protease; folded monome 64.4 4.4 0.00015 30.0 2.7 24 1-26 11-34 (114)
49 3slz_A GAG-Pro-POL polyprotein 50.1 10 0.00035 28.8 2.7 23 2-26 25-47 (132)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 47.4 11 0.00038 30.9 2.7 24 1-26 10-33 (203)
51 3cms_A Chymosin B; hydrolase, 42.1 22 0.00075 31.2 4.1 44 167-226 2-45 (323)
52 1mpp_A Pepsin; hydrolase(acid 40.1 26 0.00088 31.2 4.3 45 166-226 5-49 (361)
53 2rsp_A RSV protease; hydrolase 38.9 15 0.00051 27.6 2.0 17 10-26 29-45 (124)
54 1bxo_A Protein (penicillopepsi 38.0 31 0.0011 30.2 4.4 41 166-226 4-44 (323)
55 1izd_A Aspartic proteinase; su 35.4 39 0.0013 29.5 4.6 41 166-226 4-44 (323)
56 3slz_A GAG-Pro-POL polyprotein 34.0 34 0.0012 25.9 3.4 25 187-226 26-50 (132)
57 1b5f_A Protein (cardosin A); h 33.5 30 0.001 28.9 3.4 16 211-226 29-44 (239)
58 1ibq_A Aspergillopepsin; aspar 32.9 41 0.0014 29.4 4.4 16 211-226 28-43 (325)
59 3vla_A EDGP; extracellular, in 31.5 46 0.0016 30.4 4.6 45 166-226 6-51 (413)
60 3fv3_A SAPP1P-secreted asparti 30.1 36 0.0012 29.9 3.5 16 211-226 28-43 (339)
61 1j71_A Candidapepsin, aspartic 29.6 37 0.0013 29.8 3.5 16 211-226 28-43 (334)
62 2hah_A Protease, retropepsin; 29.6 35 0.0012 25.2 2.7 31 179-225 10-40 (116)
63 3aup_A SBG7S, BG, basic 7S glo 28.8 40 0.0014 30.6 3.6 16 211-226 37-52 (403)
64 1am5_A Pepsin, acid proteinase 27.1 45 0.0015 29.1 3.6 16 211-226 28-43 (324)
65 2qzx_A Candidapepsin-5; aspart 26.8 45 0.0015 29.3 3.5 16 211-226 28-43 (342)
66 1wkr_A Polyporopepsin; hydrola 26.7 46 0.0016 29.3 3.5 16 211-226 28-43 (340)
67 3ka2_A [L-Ala51;Gly51']HIV-1 p 26.1 40 0.0014 27.6 2.7 23 2-26 115-137 (203)
68 3psg_A Pepsinogen; hydrolase(a 26.0 35 0.0012 30.7 2.6 15 211-225 72-86 (370)
69 3pvk_A Candidapepsin-2; hydrol 24.9 51 0.0017 28.9 3.5 16 211-226 28-43 (342)
70 2x0b_A Renin; hydrolase-hormon 24.8 49 0.0017 29.9 3.4 16 211-226 77-92 (383)
71 3k1w_A Renin; protease, altern 24.4 59 0.002 28.4 3.8 16 211-226 34-49 (341)
72 4aa9_A Chymosin; hydrolase, as 24.3 42 0.0014 29.2 2.8 16 211-226 27-42 (320)
73 1yg9_A Aspartic protease BLA G 24.2 56 0.0019 28.6 3.6 16 211-226 31-46 (330)
74 1dpj_A Proteinase A; proteinas 23.8 51 0.0017 28.8 3.2 16 211-226 29-44 (329)
75 1lya_B Cathepsin D; lysosomal 23.1 57 0.002 26.9 3.3 24 3-26 107-134 (241)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=6e-62 Score=460.60 Aligned_cols=324 Identities=21% Similarity=0.340 Sum_probs=268.5
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEEecC-CCCCCceeecCCCCCCCC--------------CCCCCCCceeEEec-CC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAIFDP-RKSSSFQKINCDHPDCTY--------------FKCVNEQCVYTMKY-AD 64 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~y~p-~~Sst~~~~~c~~~~C~~--------------~~c~~~~~~~~~~Y-~~ 64 (341)
+++|.||||||++.|+|||||+++||++++ .+|+||+.+.|.+..|.. ..|.++.|.|.+.| ++
T Consensus 23 ~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d 102 (413)
T 3vla_A 23 VTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVI 102 (413)
T ss_dssp EEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTT
T ss_pred EEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcC
Confidence 478999999999999999999999997764 689999999999877764 13555669999999 58
Q ss_pred CceeEEEEEEEEEEEEecCCC----ceeecceEEecccCCCCCcccccCCCcceeeecCCCCCchHHhhhcc--cCCceE
Q 036636 65 QSVTKGFAAHETISVIGKGEG----KAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTISFISQLGSI--IKKRFS 138 (341)
Q Consensus 65 G~~~~G~~~~D~v~i~~~~g~----~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~--~~~~Fs 138 (341)
|+++.|++++|+|+|+..+|. .+.++++.|||++.+... ......+||||||++.+|++.||..+ ++++||
T Consensus 103 ~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~---g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS 179 (413)
T 3vla_A 103 NTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ---NLASGVVGMAGLGRTRIALPSQFASAFSFKRKFA 179 (413)
T ss_dssp TEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT---TSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEE
T ss_pred CceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc---CcccccccccccCCCCcchHHHHhhhcCCCceEE
Confidence 889999999999999766554 248889999999986321 13467899999999999999999876 579999
Q ss_pred EecCCCCCCCCCcceeEEEcCCCCC------CCCC-ceeeeeecCC------------CCeeEEEEeeEEEcCeeeecCC
Q 036636 139 YCLVIPLPNGEYTSSYLKFGTDMGY------RRPS-TQATKFINHP------------NNFYYLSLKDISIDNERMNFPP 199 (341)
Q Consensus 139 ~~l~~~~~~~~~~~G~l~fGg~d~~------~~~~-~~~~pl~~~~------------~~~~~v~l~~i~v~~~~~~~~~ 199 (341)
+||.+. ... +|.|+||+.+.. +.++ +.|+||+.++ ..+|.|.|++|+|+++.+.++.
T Consensus 180 ~cL~~~-~~~---~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~ 255 (413)
T 3vla_A 180 MCLSGS-TSS---NSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNT 255 (413)
T ss_dssp EECCSC-SSS---CEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCG
T ss_pred EeCCCC-CCC---ceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCc
Confidence 999984 233 899999998742 3567 9999999863 1699999999999999998887
Q ss_pred CCccccccCCCceEEccccceeeechHHHHHHHHHHHHHhhh---cccccCCCCCCCCCceeecC-CC----CCCCCeEE
Q 036636 200 DTFDITVSGEGGCIIDSGSVLTYFHSDVYWKLHEKFVSYFER---FQLAQLSDCPEPIQLCYFLP-ET----FNRFPSMA 271 (341)
Q Consensus 200 ~~~~~~~~~~~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~~C~~~~-~~----~~~~P~i~ 271 (341)
..+++++++++++||||||++++||+++|++|.++|.+++.. .+... ...+..|+..+ .. ...+|+|+
T Consensus 256 ~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~----~~~~~~C~~~~~~~~~~~~~~lP~i~ 331 (413)
T 3vla_A 256 SLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVAS----VAPFGACFSTDNILSTRLGPSVPSID 331 (413)
T ss_dssp GGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECC----CTTCSCEEECTTCCEETTEECCCCEE
T ss_pred hhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCC----CCCCcceeccCCccccccccCCCcEE
Confidence 777766556788999999999999999999999999988641 11121 23567999876 11 24799999
Q ss_pred EEEcC--cEEEeeCCCcEEEEcCCCeEEEEEec-C--CCCceeechhhccceEEEEECCCCEEEEEcCCC
Q 036636 272 FYFED--ANLRIDGENVFIIDYENHFFLLAVAP-H--DDLVALIGSQQQRDTRFVYDLNIDLLSFVKENC 336 (341)
Q Consensus 272 f~f~g--~~~~i~~~~~y~~~~~~~~~C~~~~~-~--~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c 336 (341)
|+|+| +.++|++++ |+.+.+++..|++++. + ..+.||||+.|||++|+|||++++|||||++.+
T Consensus 332 f~f~g~~~~~~l~~~~-y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~ 400 (413)
T 3vla_A 332 LVLQSESVVWTITGSN-SMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLL 400 (413)
T ss_dssp EECSSTTCEEEECHHH-HEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEGG
T ss_pred EEEcCCcEEEEeCccc-eEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEecc
Confidence 99998 899999999 9887655789998877 2 236899999999999999999999999998643
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=6.8e-59 Score=439.75 Aligned_cols=327 Identities=19% Similarity=0.305 Sum_probs=251.8
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEEec-CCCCCCceeecCCCCCCCC--------------CCCCCCCceeEEecC-C
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAIFD-PRKSSSFQKINCDHPDCTY--------------FKCVNEQCVYTMKYA-D 64 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~y~-p~~Sst~~~~~c~~~~C~~--------------~~c~~~~~~~~~~Y~-~ 64 (341)
+++|.||||||+++|+|||||++|||... +.+|+|++++.|.+..|.. ..|.++.|.|.+.|+ +
T Consensus 24 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d 103 (403)
T 3aup_A 24 WANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPIT 103 (403)
T ss_dssp EEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTT
T ss_pred EEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCCCccccCccccCccccCCCCCCCCCCCcceeEeecCCC
Confidence 47899999999999999999999999665 6789999999998766643 235445799999998 7
Q ss_pred CceeEEEEEEEEEEEEecCCCc------eeecceEEecccCCCCCcccccCCCcceeeecCCCCCchHHhhhcc--cCCc
Q 036636 65 QSVTKGFAAHETISVIGKGEGK------AIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTISFISQLGSI--IKKR 136 (341)
Q Consensus 65 G~~~~G~~~~D~v~i~~~~g~~------~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~--~~~~ 136 (341)
|+.+.|.+++|+|+|++.+|.. +.++++.|||++.+.... ......+||||||++.++++.||++. .+++
T Consensus 104 ~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~--~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~ 181 (403)
T 3aup_A 104 QQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQK--GLPRNTQGVAGLGHAPISLPNQLASHFGLQRQ 181 (403)
T ss_dssp TEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSS--SSSTTCCEEEECSSSTTSHHHHHHHHHTCCSE
T ss_pred CceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccccc--CCCCCCceEEECCCCCcCHHHHHHhhcCCCCe
Confidence 8899999999999997654432 489999999999864310 12457899999999999999999765 3689
Q ss_pred eEEecCCCCCCCCCcceeEEEcCCC-CCC--C-C-----CceeeeeecCCCCeeEEEEeeEEEcCeee-ecCCCCccccc
Q 036636 137 FSYCLVIPLPNGEYTSSYLKFGTDM-GYR--R-P-----STQATKFINHPNNFYYLSLKDISIDNERM-NFPPDTFDITV 206 (341)
Q Consensus 137 Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~--~-~-----~~~~~pl~~~~~~~~~v~l~~i~v~~~~~-~~~~~~~~~~~ 206 (341)
||+||.+.. .. .|.|+||| | .++ . | ++.|+|++.++..+|.|.|++|+|+++.+ .++...+++++
T Consensus 182 FS~~L~~~~-~~---~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~ 256 (403)
T 3aup_A 182 FTTCLSRYP-TS---KGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVG 256 (403)
T ss_dssp EEEECCSCT-TS---CEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETTEEEECC---------
T ss_pred EEEEcCCCC-CC---CeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeecc
Confidence 999998852 33 89999999 5 334 3 4 99999999864479999999999999988 66666665555
Q ss_pred cCCCceEEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCc---EEEeeC
Q 036636 207 SGEGGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDA---NLRIDG 283 (341)
Q Consensus 207 ~~~~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~---~~~i~~ 283 (341)
.+..++||||||++++||+++|++|.++|.+++....... . ...+..|+.-+ ....+|+|+|+|+|. .++|++
T Consensus 257 ~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~-~--~~~~~~c~~c~-~~~~~P~i~f~f~g~~~~~~~l~~ 332 (403)
T 3aup_A 257 STSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVK-S--VAPFGLCFNSN-KINAYPSVDLVMDKPNGPVWRISG 332 (403)
T ss_dssp ---CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEEC-C--CTTCSCEECGG-GCCCCCCEEEEESSTTCCEEEECH
T ss_pred CCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccC-C--CCCCCceEECC-CcCcCCcEEEEEcCCCceEEEEcc
Confidence 5667899999999999999999999999987664322210 0 12334676543 122689999999985 999999
Q ss_pred CCcEEEEcCCCeEEEEEecCC---CCceeechhhccceEEEEECCCCEEEE-------EcCCCCCC
Q 036636 284 ENVFIIDYENHFFLLAVAPHD---DLVALIGSQQQRDTRFVYDLNIDLLSF-------VKENCSDD 339 (341)
Q Consensus 284 ~~~y~~~~~~~~~C~~~~~~~---~~~~ilG~~fl~~~yvvfD~~~~riGf-------a~~~c~~~ 339 (341)
++ |+....++..|++|+..+ .+.||||+.|||++|+|||++++|||| ++++|+..
T Consensus 333 ~~-y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~ 397 (403)
T 3aup_A 333 ED-LMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADL 397 (403)
T ss_dssp HH-HEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGGS
T ss_pred cc-eEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCcccc
Confidence 99 988765567999888732 368999999999999999999999999 56677643
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.7e-56 Score=411.26 Aligned_cols=289 Identities=19% Similarity=0.256 Sum_probs=229.8
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE--------------ecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI--------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~--------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++||. |||++|+|++. .+|.|.+.|++|
T Consensus 26 ~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~---------------~~~~~~i~Yg~G- 89 (351)
T 1tzs_A 26 FGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQ---------------PGQSFSIQYGTG- 89 (351)
T ss_dssp CEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBC---------------CSCEEEEESSSC-
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEE---------------CCCEEEEEeCCC-
Confidence 478999999999999999999999993 44444444433 469999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||++.++ ++.+|.++ + +++|
T Consensus 90 s~~G~~~~D~v~i----g~~-~~~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~F 162 (351)
T 1tzs_A 90 SLSGIIGADQVSV----EGL-TVVGQQFGESVTEPGQT--FVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMF 162 (351)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEECSCCCGG--GGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEE
T ss_pred CeEEEEEEeEEEE----CCe-EECCeEEEEEEeccccc--cccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEE
Confidence 5899999999999 887 99999999999876521 123578999999997654 56677766 4 6999
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+..... ..|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+... ....+||||
T Consensus 163 S~~L~~~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDS 229 (351)
T 1tzs_A 163 SVYMSSNPEGG--AGSELIFGGYDHSHFSGSLNWVPVTKQ--AYWQIALDNIQVGGTVMFCS---------EGCQAIVDT 229 (351)
T ss_dssp EEECCCCC--C--TTCEEEETSCCGGGBCSCCEEEECSEE--TTEEEEEEEEEETTEEEECT---------TCEEEEECT
T ss_pred EEEEcCCCCCC--CCCEEEECCCCHHHcCCceEEEecCCC--ceEEEEeCEEEECCceEEcC---------CCceEEecc
Confidence 99998863221 17999999998 457899999999875 89999999999999875421 256799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCC--C
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYEN--H 294 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~--~ 294 (341)
||++++||++++++|.+++.+.... ..+..+|+..+ .+|+|+|+|+|.+++|++++ |+..... +
T Consensus 230 GTs~~~lP~~~~~~l~~~~~~~~~~---------g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~-yi~~~~~~~~ 295 (351)
T 1tzs_A 230 GTSLITGPSDKIKQLQNAIGAAPVD---------GEYAVECANLN----VMPDVTFTINGVPYTLSPTA-YTLLDFVDGM 295 (351)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEECS---------SSEEECGGGGG----GSCCEEEEETTEEEEECTTT-SEECC-----
T ss_pred CCcceeCCHHHHHHHHHHhCCcccC---------CeEEEeCCCCc----cCCcEEEEECCEEEEECHHH-hEeeccCCCC
Confidence 9999999999999999988543210 11233687643 68999999999999999999 8877542 3
Q ss_pred eEEE-EEecC-----CCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 295 FFLL-AVAPH-----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 295 ~~C~-~~~~~-----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
..|+ ++... ..+.||||++|||++|+|||++++|||||+++|..+
T Consensus 296 ~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 296 QFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred CeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 5898 57652 356899999999999999999999999999999764
No 4
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.4e-56 Score=419.71 Aligned_cols=286 Identities=16% Similarity=0.259 Sum_probs=231.9
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYAD 64 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~ 64 (341)
+++|.||||||+|+|+|||||++||| .|||++|+||+.. +|.|.+.|++
T Consensus 64 ~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~ 128 (383)
T 2x0b_A 64 YGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHN---------------GTELTLRYST 128 (383)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEE---------------EEEEEEECSS
T ss_pred EEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEEC---------------CcEEEEEcCC
Confidence 47899999999999999999999999 3666666666653 4899999999
Q ss_pred CceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CC
Q 036636 65 QSVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KK 135 (341)
Q Consensus 65 G~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~ 135 (341)
| ++.|.+++|+|+| ++. .++ +.|||++.+.+.. ......|||||||++.++ ++.+|.++ + ++
T Consensus 129 G-s~~G~~~~Dtv~i----g~~-~v~-~~Fg~a~~~~g~~--f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~ 199 (383)
T 2x0b_A 129 G-TVSGFLSQDIITV----GGI-TVT-QMFGEVTEMPALP--FMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKED 199 (383)
T ss_dssp C-EEEEEEEEEEEEE----TTE-EEE-EEEEEEEECCHHH--HTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSS
T ss_pred c-cEEEEEEeeEEEE----cCc-eEE-EEEEEEEecCCcc--cccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCC
Confidence 9 6999999999999 887 898 9999999876511 123578999999998754 55667766 4 59
Q ss_pred ceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEE
Q 036636 136 RFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCII 214 (341)
Q Consensus 136 ~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 214 (341)
+||+||.+........+|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+... ++..+||
T Consensus 200 ~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~--~~w~v~l~~i~v~~~~~~~~---------~~~~aii 268 (383)
T 2x0b_A 200 VFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSSTLLCE---------DGCLALV 268 (383)
T ss_dssp EEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST--TSCEEEECEEEESSCCCBST---------TCEEEEE
T ss_pred EEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC--ceEEEEEeEEEeCCceEEcC---------CCcEEEE
Confidence 99999988632210017999999998 457799999999875 89999999999998864321 2568999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCC-
Q 036636 215 DSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYEN- 293 (341)
Q Consensus 215 DTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~- 293 (341)
||||+++++|++++++|.+++.+.. .. ..+..+|+..+ .+|+|+|+|+|.+++|++++ |+.+...
T Consensus 269 DTGTs~~~lP~~~~~~i~~~i~a~~----~~-----g~~~v~C~~~~----~~P~i~f~~~g~~~~l~~~~-yi~~~~~~ 334 (383)
T 2x0b_A 269 DTGASYISGSTSSIEKLMEALGAKK----RL-----FDYVVKCNEGP----TLPDISFHLGGKEYTLTSAD-YVFQESYS 334 (383)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEE----CS-----SCEEEEGGGTT----TCCCEEEEETTEEEEECHHH-HBCCCCCC
T ss_pred cCCCceEEcCHHHHHHHHHHhCCcc----cC-----CcEEEeccccc----cCceEEEEECCEEEEECHHH-hEeeccCC
Confidence 9999999999999999999986532 11 22344787653 78999999999999999999 8877542
Q ss_pred -CeEEE-EEecC-----CCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 294 -HFFLL-AVAPH-----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 294 -~~~C~-~~~~~-----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
+..|+ ++... ..+.||||++|||++|+|||++|+|||||+++
T Consensus 335 ~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 335 SKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp TTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 45898 57652 35689999999999999999999999999874
No 5
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6e-56 Score=414.44 Aligned_cols=282 Identities=20% Similarity=0.295 Sum_probs=230.2
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||++||| .|||++|+|++.. +|.|.+.|++|
T Consensus 59 ~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~G- 122 (370)
T 3psg_A 59 FGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEAT---------------SQELSITYGTG- 122 (370)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE---------------EEEEEEESSSC-
T ss_pred EEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEEC---------------CcEEEEEeCCc-
Confidence 37899999999999999999999999 4777777777664 48999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||++.++ ++.+|.++ + +++|
T Consensus 123 s~~G~~~~Dtv~i----g~~-~v~~~~Fg~a~~~~~~~--~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~F 195 (370)
T 3psg_A 123 SMTGILGYDTVQV----GGI-SDTNQIFGLSETEPGSF--LYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLF 195 (370)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEECSCCCGG--GGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEE
T ss_pred eEEEEEEEEEEee----CCc-ccCCeEEEEEEeecccc--cccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEE
Confidence 6999999999999 887 99999999999886621 123678999999987654 56677766 4 5899
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+.. .. +|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+... ++..+||||
T Consensus 196 S~~L~~~~-~~---~G~l~fGg~D~~~y~g~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~---------~~~~aiiDT 260 (370)
T 3psg_A 196 SVYLSSND-DS---GSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACS---------GGCQAIVDT 260 (370)
T ss_dssp EEEEC---------CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECT---------TCEEEEECT
T ss_pred EEEEccCC-CC---CeEEEEEeeChHhcCCcceeeccccc--ceeEEEEeEEEECCEEEecC---------CCceEEEcC
Confidence 99999852 23 8999999998 567899999999985 89999999999999877542 256899999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||+++++|++++++|.+++.+... .. ..+..+|... ..+|+|+|+|+|.+++||+++ |+.. . +..
T Consensus 261 GTs~~~lP~~~~~~i~~~i~a~~~---~~-----g~~~v~C~~~----~~lP~i~f~~~g~~~~l~~~~-yi~~-~-~~~ 325 (370)
T 3psg_A 261 GTSLLTGPTSAIANIQSDIGASEN---SD-----GEMVISCSSI----DSLPDIVFTIDGVQYPLSPSA-YILQ-D-DDS 325 (370)
T ss_dssp TCCSEEEEHHHHHHHHHHTTCEEC---TT-----CCEECCGGGG----GGCCCEEEEETTEEEEECHHH-HEEE-C-SSC
T ss_pred CCCcEECCHHHHHHHHHHhCCccc---CC-----CcEEEECCCc----ccCCcEEEEECCEEEEECHHH-hccc-C-CCE
Confidence 999999999999999988855421 11 2234467654 368999999999999999999 8887 3 346
Q ss_pred EE-EEec-C----CCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LL-AVAP-H----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~-~~~~-~----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|+ ++.. + .++.||||++|||++|+|||++++|||||+++
T Consensus 326 C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 326 CTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 88 4654 2 23469999999999999999999999999975
No 6
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.3e-55 Score=412.63 Aligned_cols=310 Identities=19% Similarity=0.341 Sum_probs=246.2
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEEecCCCCCCceeecCCCCCCCC------CCCCC---------CCc-eeEEecCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAIFDPRKSSSFQKINCDHPDCTY------FKCVN---------EQC-VYTMKYAD 64 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~y~p~~Sst~~~~~c~~~~C~~------~~c~~---------~~~-~~~~~Y~~ 64 (341)
+++|.|||| |+|||||++|||.+++ +.+++.+.|.+..|.. ..|.. ..| .|.+.|++
T Consensus 17 ~~~i~iGtP-----v~~DTGSs~lWv~c~~--~~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~Ygd 89 (381)
T 1t6e_X 17 TIPFHDGAS-----LVLDVAGPLVWSTCDG--GQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVS 89 (381)
T ss_dssp EEEEETTEE-----EEEETTCCCEEECCCT--TCCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBCEECCBCTTT
T ss_pred EEEEeCCCE-----EEEECCCCceEEeCCC--CCCCCccCCCCchhccccCCCCCCCCCccCCcCcCCCccccccccccC
Confidence 478999998 9999999999997665 3457788998877753 24542 236 59999999
Q ss_pred CceeEEEEEEEEEEEEecCCCceeecce----EEecccCCCCCcccccCCCcceeeecCCCCCchHHhhhcc--cCCceE
Q 036636 65 QSVTKGFAAHETISVIGKGEGKAIFHGA----LFGCSNDNHGFDEDARDGALAGVLGLSRVTISFISQLGSI--IKKRFS 138 (341)
Q Consensus 65 G~~~~G~~~~D~v~i~~~~g~~~~~~~~----~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~--~~~~Fs 138 (341)
|+.+.|.+++|+|+|++.+|.. .++++ .|||++.+... ......|||||||++.+|++.||..+ ++++||
T Consensus 90 Gs~~~G~l~~Dtv~ig~~~g~~-~v~~~~~~~~Fg~~~~~~~~---~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS 165 (381)
T 1t6e_X 90 GACAAGSLSHTRFVANTTDGSK-PVSKVNVGVLAACAPSKLLA---SLPRGSTGVAGLANSGLALPAQVASAQKVANRFL 165 (381)
T ss_dssp CCBCCEEEEEEEEEEEEESSSS-EEEEEEEEEEEEECCGGGGT---TSCTTEEEEEECSSSTTSHHHHHHHHHTCCSEEE
T ss_pred CceeeEEEEEEEEEeeccCCCc-cccceeeeeEeecCcccccC---CCCCCCceEEEeCCCcchhHHHHhhhcccCceEE
Confidence 9778999999999997655544 56654 67999876321 13467899999999999999999876 579999
Q ss_pred EecCCCCCCCCCcceeEEEcCCCCC---CCCCceeeeeecCC-CCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEE
Q 036636 139 YCLVIPLPNGEYTSSYLKFGTDMGY---RRPSTQATKFINHP-NNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCII 214 (341)
Q Consensus 139 ~~l~~~~~~~~~~~G~l~fGg~d~~---~~~~~~~~pl~~~~-~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 214 (341)
+||.+. . +|.|+|||++.. +.+++.|+|++.++ ..+|.|.|++|+|+++.+.++...+. ++++||
T Consensus 166 ~~L~~~---~---~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~-----~~~~ii 234 (381)
T 1t6e_X 166 LCLPTG---G---PGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALA-----TGGVML 234 (381)
T ss_dssp EECCSS---S---CEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSC-----TTCEEE
T ss_pred EEeCCC---C---CeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHcc-----CCCEEE
Confidence 999874 3 899999998753 56899999998753 34677999999999998877655443 467999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhhh-------cccc-cCCCCCCCCCceeecC-CC----CCCCCeEEEEEcC-cEEE
Q 036636 215 DSGSVLTYFHSDVYWKLHEKFVSYFER-------FQLA-QLSDCPEPIQLCYFLP-ET----FNRFPSMAFYFED-ANLR 280 (341)
Q Consensus 215 DTGtt~~~lp~~~~~~l~~~i~~~~~~-------~~~~-~~~~~~~~~~~C~~~~-~~----~~~~P~i~f~f~g-~~~~ 280 (341)
||||++++||+++|++|.+++.+++.. .... . . ...+..|++.+ .. ...+|+|+|+|+| ++++
T Consensus 235 DTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~ 311 (381)
T 1t6e_X 235 STRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVE-A--VAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWT 311 (381)
T ss_dssp CSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEEC-C--CTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEE
T ss_pred ECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCC-C--CCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEE
Confidence 999999999999999999999887642 1110 0 0 23557899865 11 1368999999985 9999
Q ss_pred eeCCCcEEEEcCCCeEEEEEecCC--------CCceeechhhccceEEEEECCCCEEEEEcCCC
Q 036636 281 IDGENVFIIDYENHFFLLAVAPHD--------DLVALIGSQQQRDTRFVYDLNIDLLSFVKENC 336 (341)
Q Consensus 281 i~~~~~y~~~~~~~~~C~~~~~~~--------~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c 336 (341)
|++++ |++...++..|++++... .+.||||+.|||++|+|||++++|||||+++.
T Consensus 312 l~~~~-y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 312 MTGKN-SMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp ECHHH-HEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred eCCCe-EEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 99999 888765577999887732 25899999999999999999999999998754
No 7
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.5e-55 Score=406.57 Aligned_cols=280 Identities=20% Similarity=0.354 Sum_probs=232.4
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE-----------------ecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI-----------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYA 63 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~-----------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~ 63 (341)
+++|.||||||+++|+|||||+++||. |||++|+|++.. +|.|.+.|+
T Consensus 15 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg 79 (339)
T 3fv3_A 15 ASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNL---------------GAAFTIRYG 79 (339)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEE---------------EEEEEEECT
T ss_pred EEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeC---------------CceEEEEEC
Confidence 478999999999999999999999993 666667776664 389999999
Q ss_pred CCceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc----------------hHH
Q 036636 64 DQSVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS----------------FIS 127 (341)
Q Consensus 64 ~G~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s----------------~~~ 127 (341)
+|+.+.|.+++|+|+| ++. .++++.|||++...+ .+||||||++.++ ++.
T Consensus 80 ~gs~~~G~~~~D~v~~----g~~-~v~~~~fg~~~~~~~---------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~ 145 (339)
T 3fv3_A 80 DGSTSQGTWGKDTVTI----NGV-SITGQQIADVTQTSV---------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPV 145 (339)
T ss_dssp TSCEEEEEEEEEEEEE----TTE-EEEEEEEEEEEEESS---------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHH
T ss_pred CCceEEEEEEEEEEEE----CCE-EECceEEEEEEecCC---------CceeEEecCccccccccccccccCccCCcHHH
Confidence 9999999999999999 887 999999999988654 5899999987643 778
Q ss_pred hhhcc--c-CCceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCcc
Q 036636 128 QLGSI--I-KKRFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFD 203 (341)
Q Consensus 128 ql~~~--~-~~~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~ 203 (341)
+|.++ + +++||+||.+.. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+..
T Consensus 146 ~L~~~g~i~~~~fsl~l~~~~-~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~------ 213 (339)
T 3fv3_A 146 TLKKQGKIRTNAYSLYLNSPS-AE---TGTIIFGGVDNAKYSGKLVAEQVTSS--QALTISLASVNLKGSSFSF------ 213 (339)
T ss_dssp HHHHTTSCSSSEEEEECCCTT-CS---EEEEEETEEETTSBSSCCEEEEBCCS--SSCEEEEEEEEESSCEEEE------
T ss_pred HHHHCCCCCCceEEEEECCCC-CC---CeEEEEeeechHHeecceEEEecccC--ccEEEEEEEEEECCEeecC------
Confidence 88876 4 589999998752 23 8999999988 567899999999986 7999999999999987754
Q ss_pred ccccCCCceEEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEc-CcEEEee
Q 036636 204 ITVSGEGGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFE-DANLRID 282 (341)
Q Consensus 204 ~~~~~~~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~-g~~~~i~ 282 (341)
+..++|||||++++||++++++|.+++.+......... ..+..+|+. ..+|+|+|+|+ |.+++||
T Consensus 214 -----~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~----~~~~~~C~~-----~~~p~i~f~f~~g~~~~v~ 279 (339)
T 3fv3_A 214 -----GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQ----YLYFIDCNT-----DTSGTTVFNFGNGAKITVP 279 (339)
T ss_dssp -----EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTE----EEEEECTTC-----CCCSEEEEEETTSCEEEEE
T ss_pred -----CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccC----ceEEEecCC-----CCCCcEEEEECCCCEEEEC
Confidence 34699999999999999999999999975532100010 123346764 25899999996 7999999
Q ss_pred CCCcEEEEcCCCeEE-EEEecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 283 GENVFIIDYENHFFL-LAVAPHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 283 ~~~~y~~~~~~~~~C-~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
+++ |+.+..++ .| +++.+ .+.||||++|||++|+|||++++|||||+++|+..
T Consensus 280 ~~~-~~~~~~~~-~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 333 (339)
T 3fv3_A 280 NTE-YVYQNGDG-TCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTD 333 (339)
T ss_dssp GGG-GEEECSSS-CEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred HHH-heeeCCCC-eEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCc
Confidence 999 88876534 56 56766 35799999999999999999999999999999854
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-55 Score=402.70 Aligned_cols=280 Identities=19% Similarity=0.286 Sum_probs=232.1
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++|
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~G- 78 (324)
T 1am5_A 15 YGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVET---------------GKTVDLTYGTG- 78 (324)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEE---------------EEEEEEECSSC-
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeC---------------CcEEEEEECCC-
Confidence 37899999999999999999999999 4777777777664 48999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|++ ++. .++++.|||++...+.. ......+||||||++.++ ++.+|.++ + +++|
T Consensus 79 s~~G~~~~D~v~~----g~~-~~~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~F 151 (324)
T 1am5_A 79 GMRGILGQDTVSV----GGG-SDPNQELGESQTEPGPF--QAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLF 151 (324)
T ss_dssp EEEEEEEEEEEES----SSS-CEEEEEEEEEEECCSTT--TTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEE
T ss_pred CeEEEEEECceeE----CCc-EEcccEEEEEEeccccc--ccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEE
Confidence 6699999999999 777 89999999999876521 123578999999997653 56677766 4 6999
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+.. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+... +..+||||
T Consensus 152 S~~l~~~~-~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~----------~~~aiiDS 215 (324)
T 1am5_A 152 SFYLSGGG-AN---GSEVMLGGVDNSHYTGSIHWIPVTAE--KYWQVALDGITVNGQTAACE----------GCQAIVDT 215 (324)
T ss_dssp EEECCSTT-CS---CEEEEESSCCGGGBCSCCEEEEEEEE--TTEEEEECEEEETTEECCCC----------CEEEEECT
T ss_pred EEEecCCC-CC---CcEEEECccCHHHcCCceEEEecCCC--cEEEEEEeEEEECCceeecc----------CceEEEec
Confidence 99998853 23 8999999998 457899999999875 89999999999999875321 25799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||++++||++++++|.+++.+. . .. ..+..+|+.. ..+|+|+|+|+|.+++|++++ |+... +..
T Consensus 216 GTt~~~lp~~~~~~l~~~~~~~-~---~~-----g~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~-y~~~~--~~~ 279 (324)
T 1am5_A 216 GTSKIVAPVSALANIMKDIGAS-E---NQ-----GEMMGNCASV----QSLPDITFTINGVKQPLPPSA-YIEGD--QAF 279 (324)
T ss_dssp TCSSEEECTTTHHHHHHHHTCE-E---CC-----CCEECCTTSS----SSSCCEEEEETTEEEEECHHH-HEEES--SSC
T ss_pred CCccEECCHHHHHHHHHHhCCc-c---cC-----CcEEEeCCCc----ccCCcEEEEECCEEEEECHHH-hcccC--CCe
Confidence 9999999999999999998654 1 11 2234478754 368999999999999999999 98876 568
Q ss_pred EE-EEecC-----CCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LL-AVAPH-----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~-~~~~~-----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|+ ++... ..+.||||++|||++|+|||++++|||||+++
T Consensus 280 C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 280 CTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 98 57652 35689999999999999999999999999875
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.1e-55 Score=404.95 Aligned_cols=288 Identities=15% Similarity=0.235 Sum_probs=226.4
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEEec--CCCCCCceeecCCCCCCCC---------CCCCCCCceeEEecCCCceeE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAIFD--PRKSSSFQKINCDHPDCTY---------FKCVNEQCVYTMKYADQSVTK 69 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~y~--p~~Sst~~~~~c~~~~C~~---------~~c~~~~~~~~~~Y~~G~~~~ 69 (341)
+++|.||||||+++|+|||||+++||... +..+. + ..+.+..|.. .++...+|.|.+.|++|+.+.
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~-~--~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~ 91 (334)
T 1j71_A 15 AADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVT-Y--SGQTNNFCKQEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQ 91 (334)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCC-S--TTCCTTGGGSSCCBCGGGCTTCEEEEEEEEEEBTTSCEEE
T ss_pred EEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCc-c--cccccccccCCCcCCcccCCCcccCCCceEEEECCCCEEE
Confidence 37899999999999999999999999311 11000 0 0000112321 111223589999999998889
Q ss_pred EEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCC--------chHHhhhcc--c-CCceE
Q 036636 70 GFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTI--------SFISQLGSI--I-KKRFS 138 (341)
Q Consensus 70 G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--------s~~~ql~~~--~-~~~Fs 138 (341)
|.+++|+|+| ++. .++++.|||++... ..+||||||+..+ +++.+|.++ + +++||
T Consensus 92 G~~~~D~v~~----g~~-~~~~~~fg~~~~~~---------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs 157 (334)
T 1j71_A 92 GSFYKDTVGF----GGI-SIKNQQFADVTTTS---------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYS 157 (334)
T ss_dssp EEEEEEEEEE----TTE-EEEEEEEEEEEEES---------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEE
T ss_pred EEEEEEEEEE----CCE-EEccEEEEEEEecC---------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEE
Confidence 9999999999 877 89999999998753 4689999999754 778898877 4 58999
Q ss_pred EecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccc
Q 036636 139 YCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSG 217 (341)
Q Consensus 139 ~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTG 217 (341)
+||.+.. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+.. +..+|||||
T Consensus 158 ~~l~~~~-~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~-----------~~~~iiDSG 220 (334)
T 1j71_A 158 LYLNSED-AS---TGKIIFGGVDNAKYTGTLTALPVTSS--VELRVHLGSINFDGTSVST-----------NADVVLDSG 220 (334)
T ss_dssp EECCCTT-CS---EEEEEETEEETTSEEEEEEEEECCCS--SSCEEEEEEEEETTEEEEE-----------EEEEEECTT
T ss_pred EEeCCCC-CC---CeEEEEeeechHHccCceEEEEccCC--CeEEEEEeEEEECCEeccC-----------CccEEEeCC
Confidence 9998752 23 8999999988 456789999999986 7999999999999987753 346999999
Q ss_pred cceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCC-CceeecCCCCCCCCeEEEEE-cCcEEEeeCCCcEEEEcCCCe
Q 036636 218 SVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPI-QLCYFLPETFNRFPSMAFYF-EDANLRIDGENVFIIDYENHF 295 (341)
Q Consensus 218 tt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~P~i~f~f-~g~~~~i~~~~~y~~~~~~~~ 295 (341)
|++++||++++++|.+++.+... ... ..+. .+|+. +|+|+|+| +|.+++||+++ |+....++.
T Consensus 221 Tt~~~lP~~~~~~l~~~~~~~~~---~~~----~~~~~~~C~~-------~p~i~f~f~~g~~~~i~~~~-y~~~~~~~~ 285 (334)
T 1j71_A 221 TTITYFSQSTADKFARIVGATWD---SRN----EIYRLPSCDL-------SGDAVFNFDQGVKITVPLSE-LILKDSDSS 285 (334)
T ss_dssp CSSEEECHHHHHHHHHHHTCEEE---TTT----TEEECSSSCC-------CSEEEEEESTTCEEEEEGGG-GEEECSSSS
T ss_pred CCcEecCHHHHHHHHHHcCCccc---CCC----ceEEEEcCCC-------CCceEEEEcCCcEEEECHHH-heeecCCCC
Confidence 99999999999999999976542 110 1223 57863 69999999 57999999999 888765444
Q ss_pred EEEE-EecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 296 FLLA-VAPHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 296 ~C~~-~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
.|+. +... +.||||++|||++|+|||++++|||||+++|...
T Consensus 286 ~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 328 (334)
T 1j71_A 286 ICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSS 328 (334)
T ss_dssp CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSC
T ss_pred eeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCCc
Confidence 6985 4443 3699999999999999999999999999999754
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.1e-55 Score=409.24 Aligned_cols=290 Identities=18% Similarity=0.225 Sum_probs=232.9
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE---------------ecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI---------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQ 65 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~---------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G 65 (341)
+++|.||||||+++|+|||||+++||. |||++|+|++. .+|.|.+.|++|
T Consensus 21 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~---------------~~~~~~i~Yg~G 85 (361)
T 1mpp_A 21 AIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKE---------------TDYNLNITYGTG 85 (361)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEE---------------EEEEEEEECSSC
T ss_pred EEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEe---------------cCCeEEEEECCc
Confidence 378999999999999999999999994 33333333333 348999999999
Q ss_pred ceeEEEEEEEEEEEEecCCCceeecceEEecccCCCC-----CcccccCCCcceeeecCCCCCc------------hHHh
Q 036636 66 SVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHG-----FDEDARDGALAGVLGLSRVTIS------------FISQ 128 (341)
Q Consensus 66 ~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~GIlGLg~~~~s------------~~~q 128 (341)
++.|.+++|+|+| ++. .++++.|||++...+ .. ......+||||||++.++ ++.+
T Consensus 86 -s~~G~~~~D~v~~----g~~-~v~~~~fg~~~~~~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~ 157 (361)
T 1mpp_A 86 -GANGIYFRDSITV----GGA-TVKQQTLAYVDNVSGPTAEQSP--DSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVN 157 (361)
T ss_dssp -EEEEEEEEEEEEE----TTE-EEEEEEEEEEEEEESGGGSSCT--TCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHH
T ss_pred -eEEEEEEEEEEEE----CCE-EEeceEEEEEEeccCccccccc--cccCCCCCEEEeCCcccccccccccccCCCHHHH
Confidence 5899999999999 877 999999999998654 11 123578999999987554 4556
Q ss_pred hhcc--c-CCceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCC--CCeeEEEEeeEEEcCeeeecCCCCc
Q 036636 129 LGSI--I-KKRFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHP--NNFYYLSLKDISIDNERMNFPPDTF 202 (341)
Q Consensus 129 l~~~--~-~~~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~--~~~~~v~l~~i~v~~~~~~~~~~~~ 202 (341)
|.++ + +++||+||.+. .. .|.|+|||+| .++.+++.|+|+.... ..+|.|.+++|+|+++.+...
T Consensus 158 l~~~g~i~~~~FS~~l~~~--~~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~---- 228 (361)
T 1mpp_A 158 LYKQGLISSPVFSVYMNTN--DG---GGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSF---- 228 (361)
T ss_dssp HHHTTSSSSSEEEEECCCS--SS---EEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEE----
T ss_pred HHHcCCCCCcEEEEEecCC--CC---CcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccC----
Confidence 7766 4 59999999985 33 8999999998 4678999999999862 119999999999999876431
Q ss_pred cccccCCCceE-EccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCC-CeEEEEE--c---
Q 036636 203 DITVSGEGGCI-IDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRF-PSMAFYF--E--- 275 (341)
Q Consensus 203 ~~~~~~~~~~i-iDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~-P~i~f~f--~--- 275 (341)
....+| |||||++++||++++++|.+++.+... ... ..+..+|+... .+ |+|+|+| +
T Consensus 229 -----~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~----g~~~~~C~~~~----~~~p~i~f~f~~g~~~ 292 (361)
T 1mpp_A 229 -----DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQ----QGYTVPCSKYQ----DSKTTFSLVLQKSGSS 292 (361)
T ss_dssp -----EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EET----TEEEEEHHHHT----TCCCEEEEEEECTTCS
T ss_pred -----CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCC----CcEEEECCCcc----cCCCcEEEEEEcCCcC
Confidence 145799 999999999999999999999866421 110 22334787643 56 9999999 7
Q ss_pred --CcEEEeeCCCcEEEEcC-CCeEEE-EEecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 276 --DANLRIDGENVFIIDYE-NHFFLL-AVAPHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 276 --g~~~~i~~~~~y~~~~~-~~~~C~-~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
|.+++|++++ |+.+.. ++..|+ ++.+...+.||||++|||++|+|||++++|||||+++|+..
T Consensus 293 ~~g~~~~i~~~~-y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 293 SDTIDVSVPISK-MLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp SCEEEEEEEGGG-GEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCCeEEEECHHH-hEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 7999999999 888764 356898 67664456899999999999999999999999999999875
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.4e-55 Score=403.92 Aligned_cols=281 Identities=18% Similarity=0.272 Sum_probs=231.0
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++|
T Consensus 17 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~G- 80 (323)
T 3cms_A 17 FGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNL---------------GKPLSIHYGTG- 80 (323)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE---------------EEEEEEEETTE-
T ss_pred EEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEEC---------------CcEEEEEeCCC-
Confidence 37899999999999999999999999 4777777777764 48999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCC------chHHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTI------SFISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|+| ++. +++++.|||++.+.+.. ......+||||||++.+ +++.+|.++ + +++|
T Consensus 81 s~~G~~~~D~v~i----g~~-~~~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~F 153 (323)
T 3cms_A 81 SMQGILGYDTVTV----SNI-VDIQQTVGLSTQEPGDF--FTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLF 153 (323)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEECCSHH--HHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEE
T ss_pred CeEEEEEEEEEEE----CCe-EEeccEEEEEEeccccc--ccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEE
Confidence 5899999999999 887 89999999999875511 11256899999998754 466777776 4 6999
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+.++ ....+||||
T Consensus 154 S~~l~~~--~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDS 217 (323)
T 3cms_A 154 SVYMDRN--GQ---ESMLTLGAIDPSYYTGSLHWVPVTVQ--QYWQFTVDSVTISGVVVACE---------GGCQAILDT 217 (323)
T ss_dssp EEECCTT--SS---CEEEEESCCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEEST---------TCEEEEECT
T ss_pred EEEECCC--CC---CEEEEECCCChhhccCceEEEECccC--CeEEEEEeeEEECCEEeecC---------CCcEEEEec
Confidence 9999885 23 5999999998 456789999999875 89999999999999887542 145799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||++++||++++++|.+++.+... .. ..+..+|+.. ..+|+|+|+|+|.+++|++++ |+.+ .+..
T Consensus 218 GTt~~~lP~~~~~~l~~~~~~~~~---~~-----g~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~-y~~~--~~~~ 282 (323)
T 3cms_A 218 GTSKLVGPSSDILNIQQAIGATQN---QY-----GEFDIDCDNL----SYMPTVVFEINGKMYPLTPSA-YTSQ--DQGF 282 (323)
T ss_dssp TCCSEEECHHHHHHHHHHHTCEEE---TT-----TEEEECTTCT----TTSCCEEEEETTEEEEECHHH-HEEE--ETTE
T ss_pred CCccEeCCHHHHHHHHHHhCCeec---CC-----CcEEEECCCC----ccCceEEEEECCEEEEECHHH-hccC--CCCE
Confidence 999999999999999998854321 11 1223368754 368999999999999999999 8887 3568
Q ss_pred EE-EEecC-CCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LL-AVAPH-DDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~-~~~~~-~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|+ ++... ..+.||||++|||++|+|||++++|||||+++
T Consensus 283 C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 283 CTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 98 47663 45689999999999999999999999999875
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.7e-55 Score=405.08 Aligned_cols=280 Identities=17% Similarity=0.255 Sum_probs=225.7
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE-----------------------ecCCCCCCceeecCCCCCCCCCCCCCCCce
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI-----------------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCV 57 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~-----------------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~ 57 (341)
+++|.||||||+++|+|||||+++||. |||++|+|++. .+|.
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~---------------~~~~ 79 (342)
T 2qzx_A 15 TADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQN---------------LNTR 79 (342)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEE---------------EEEE
T ss_pred EEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCccc---------------CCCc
Confidence 378999999999999999999999993 23333333332 3589
Q ss_pred eEEecCCCceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCC--------chHHhh
Q 036636 58 YTMKYADQSVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTI--------SFISQL 129 (341)
Q Consensus 58 ~~~~Y~~G~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--------s~~~ql 129 (341)
|.+.|++|+.+.|.+++|+|+| ++. .++++.|||++... ..+||||||+..+ +++.+|
T Consensus 80 ~~i~Yg~Gs~~~G~~~~D~v~~----g~~-~v~~~~fg~~~~~~---------~~~GilGLg~~~~~~~~~~~~~~~~~L 145 (342)
T 2qzx_A 80 FDIKYGDGSYAKGKLYKDTVGI----GGV-SVRDQLFANVWSTS---------ARKGILGIGFQSGEATEFDYDNLPISL 145 (342)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTE-EEEEEEEEEEEEEC---------SSSCEEECSCGGGCSSSSCCCCHHHHH
T ss_pred EEEEeCCCCeEEEEEEEEEEEE----CCE-EecceEEEEEEecC---------CCcCEEEEccccccCCCccCccHHHHH
Confidence 9999999988899999999999 877 89999999998753 4689999999754 778888
Q ss_pred hcc--c-CCceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCcccc
Q 036636 130 GSI--I-KKRFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDIT 205 (341)
Q Consensus 130 ~~~--~-~~~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~ 205 (341)
.++ + +++||+||.+.. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+..
T Consensus 146 ~~qg~i~~~~Fs~~l~~~~-~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~-------- 211 (342)
T 2qzx_A 146 RNQGIIGKAAYSLYLNSAE-AS---TGQIIFGGIDKAKYSGSLVDLPITSE--KKLTVGLRSVNVRGRNVDA-------- 211 (342)
T ss_dssp HHTTSSSSSEEEEECCCTT-CS---EEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETTEEEEE--------
T ss_pred HHCCCcCccEEEEEeCCCC-CC---CeEEEECccchhhEecceEEEeccCC--ceEEEEEeEEEECCEecCC--------
Confidence 877 4 589999998752 23 8999999987 567899999999986 7999999999999987753
Q ss_pred ccCCCceEEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEE-cCcEEEeeCC
Q 036636 206 VSGEGGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYF-EDANLRIDGE 284 (341)
Q Consensus 206 ~~~~~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f-~g~~~~i~~~ 284 (341)
+..+||||||++++||++++++|.+++.+........+ ..+..+|+. +|+|+|+| +|.+++||++
T Consensus 212 ---~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~----~~~~~~C~~-------~p~i~f~f~~g~~~~i~~~ 277 (342)
T 2qzx_A 212 ---NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGN----KVYVADCKT-------SGTIDFQFGNNLKISVPVS 277 (342)
T ss_dssp ---EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSC----EEEEECTTC-------CCEEEEEETTTEEEEEEGG
T ss_pred ---CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCC----cEEEEECCC-------CCcEEEEECCCcEEEEcHH
Confidence 34699999999999999999999999876542111000 012235752 69999999 5799999999
Q ss_pred CcEEEEc-----CCCeEEEEEecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 285 NVFIIDY-----ENHFFLLAVAPHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 285 ~~y~~~~-----~~~~~C~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
+ |+.+. +.+..|+..+... +.||||++|||++|+|||++++|||||+++|...
T Consensus 278 ~-~~~~~~~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 2qzx_A 278 E-FLFQTYYTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSE 335 (342)
T ss_dssp G-GEECCBCTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred H-hcccccccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCC
Confidence 9 88763 1235798644322 3699999999999999999999999999999754
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.2e-55 Score=403.31 Aligned_cols=284 Identities=18% Similarity=0.308 Sum_probs=232.3
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++|
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~g- 78 (329)
T 1htr_B 15 FGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTN---------------GQTFSLQYGSG- 78 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE---------------EEEEEEEETTE-
T ss_pred EEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEEC---------------CcEEEEEeCCC-
Confidence 37899999999999999999999999 4666777776654 48999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|++ ++. +++++.|||++...+.. ......+||||||++.++ ++.+|.++ + +++|
T Consensus 79 s~~G~~~~D~v~~----g~~-~~~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~F 151 (329)
T 1htr_B 79 SLTGFFGYDTLTV----QSI-QVPNQEFGLSENEPGTN--FVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVF 151 (329)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEESSCSSGG--GGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEE
T ss_pred CeEEEEEeeeEEE----cce-EECceEEEEEEEccccc--cccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEE
Confidence 5699999999999 887 99999999999876521 123578999999998654 66777766 4 6999
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+..... .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+... .....+||||
T Consensus 152 s~~L~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~--------~~~~~aiiDS 218 (329)
T 1htr_B 152 SVYLSNQQGSS---GGAVVFGGVDSSLYTGQIYWAPVTQE--LYWQIGIEEFLIGGQASGWC--------SEGCQAIVDT 218 (329)
T ss_dssp EEEECSSCSSE---EEEEEESSCCGGGEEEEEEEEEBCSS--SSCEEEECEEEETTEECCTT--------TTCEEEEECT
T ss_pred EEEEcCCCCCC---CcEEEEcccCHHHcCCceEEEECCCC--ceEEEEEeEEEECCceeeec--------CCCceEEEec
Confidence 99999863322 7999999998 456789999999875 89999999999999875411 1256799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||++++||++++++|.+++.+... .. ..+..+|+..+ .+|+|+|+|+|++++|++++ |+.... + .
T Consensus 219 GTt~~~lp~~~~~~l~~~~~~~~~---~~-----g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~-y~~~~~-g-~ 283 (329)
T 1htr_B 219 GTSLLTVPQQYMSALLQATGAQED---EY-----GQFLVNCNSIQ----NLPSLTFIINGVEFPLPPSS-YILSNN-G-Y 283 (329)
T ss_dssp TCCSEEEEGGGHHHHHHHHTCEEC---TT-----SCEEECGGGGG----GSCCEEEEETTEEEEECHHH-HEEECS-S-C
T ss_pred CCccEECCHHHHHHHHHHhCCeec---CC-----CeEEEeCCCcc----cCCcEEEEECCEEEEECHHH-hcccCC-C-E
Confidence 999999999999999998855321 11 22334687643 68999999999999999999 988765 4 8
Q ss_pred EE-EEec-C----CCC-ceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LL-AVAP-H----DDL-VALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~-~~~~-~----~~~-~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|+ ++.. + ..+ .||||++|||++|+|||++++|||||+++
T Consensus 284 C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 284 CTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 98 5665 2 244 89999999999999999999999999874
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.4e-55 Score=402.44 Aligned_cols=283 Identities=19% Similarity=0.258 Sum_probs=229.5
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||++||| .|||++|+|++.+. .|.|.+.|++|+
T Consensus 18 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~--------------~~~~~i~Yg~Gs 83 (329)
T 3c9x_A 18 ITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS--------------GASWSISYGDGS 83 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT--------------TCBEEEECTTSC
T ss_pred EEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC--------------CCeEEEEeCCCC
Confidence 37899999999999999999999999 58888888888753 489999999997
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc---------hHHhhhccc-CCc
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS---------FISQLGSII-KKR 136 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s---------~~~ql~~~~-~~~ 136 (341)
.+.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||+..++ +..+|.+++ +++
T Consensus 84 ~~~G~~~~D~v~i----g~~-~v~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~~ 156 (329)
T 3c9x_A 84 SSSGDVYTDKVTI----GGF-SVNTQGVESATRVSTEF--VQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASSLAEPL 156 (329)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHHH--HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTTSSSSE
T ss_pred cEEEEEEEEEEEE----CCE-EEcceEEEEEEecCccc--cccCCCceeEEeCcccccccCCCCCCCHHHHHHHhcCCCE
Confidence 7999999999999 887 89999999999865411 012578999999987543 566776665 689
Q ss_pred eEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEc
Q 036636 137 FSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIID 215 (341)
Q Consensus 137 Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiD 215 (341)
||+||.+. . .|.|+|||+| .++.+++.|+|+... ..+|.|.+++|+|+++.+.. ....+|||
T Consensus 157 FS~~l~~~---~---~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~v~l~~i~v~~~~~~~----------~~~~aiiD 219 (329)
T 3c9x_A 157 FTADLRHG---Q---NGSYNFGYIDTSVAKGPVAYTPVDNS-QGFWEFTASGYSVGGGKLNR----------NSIDGIAD 219 (329)
T ss_dssp EEEECCSS---S---CEEEEESSCCGGGCSSCEEEEECBCT-TSSCEEEECCEEETTCCCCS----------CCEEEEEC
T ss_pred EEEEecCC---C---CcEEEEeCcChhhcccceEEEEccCC-CceEEEEEeeEEECCEeccC----------CCceEEEE
Confidence 99999873 3 8999999998 567899999999854 58999999999999986531 14579999
Q ss_pred cccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEc-C-C
Q 036636 216 SGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDY-E-N 293 (341)
Q Consensus 216 TGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~-~-~ 293 (341)
|||++++||++++++|.+++..... .... ..+..+|+. .+|+|+|+|+|.+++||+++ |+... + +
T Consensus 220 SGTt~~~lp~~~~~~i~~~i~~a~~--~~~~----~~~~~~C~~------~~P~i~f~f~g~~~~ip~~~-~~~~~~~~~ 286 (329)
T 3c9x_A 220 TGTTLLLLDDNVVDAYYANVQSAQY--DNQQ----EGVVFDCDE------DLPSFSFGVGSSTITIPGDL-LNLTPLEEG 286 (329)
T ss_dssp TTCCSEEECHHHHHHHHTTCTTCEE--ETTT----TEEEEETTC------CCCCEEEEETTEEEEECGGG-GEEEESSTT
T ss_pred CCCCcEeCCHHHHHHHHHhCCCcEE--cCCC----CEEEEECCC------CCCcEEEEECCEEEEECHHH-eeeeccCCC
Confidence 9999999999999998887733211 0000 112236763 58999999999999999999 77664 2 2
Q ss_pred CeEEEE-Eec-CCCCceeechhhccceEEEEECCCCEEEEEcC
Q 036636 294 HFFLLA-VAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKE 334 (341)
Q Consensus 294 ~~~C~~-~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~ 334 (341)
...|++ +.. ...+.||||++|||++|+|||++++|||||++
T Consensus 287 ~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 287 SSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 368996 555 34568999999999999999999999999974
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.5e-55 Score=403.40 Aligned_cols=281 Identities=19% Similarity=0.299 Sum_probs=233.3
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++... |.|.+.|++|
T Consensus 14 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------------~~~~i~Yg~g- 77 (320)
T 4aa9_A 14 FGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG---------------KPLSIHYGTG- 77 (320)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------EEEEEEETTE-
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC---------------cEEEEEECCc-
Confidence 47899999999999999999999999 57788888887753 8999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCC------chHHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTI------SFISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||++.+ +++.+|.++ + +++|
T Consensus 78 s~~G~~~~D~v~i----g~~-~v~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~F 150 (320)
T 4aa9_A 78 SMEGFLGYDTVTV----SNI-VDPNQTVGLSTEQPGEV--FTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLF 150 (320)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEECCSHH--HHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEE
T ss_pred EEEEEEEEEEEEE----CCE-eecCeEEEEEEEccccc--ccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceE
Confidence 5899999999999 887 99999999999876521 12356799999998653 467778776 4 6899
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+..+ .+..+||||
T Consensus 151 s~~l~~~--~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~---------~~~~~iiDs 214 (320)
T 4aa9_A 151 SVYMDRN--GQ---GSMLTLGAIDPSYYTGSLHWVPVTLQ--QYWQFTVDSVTINGVAVACV---------GGCQAILDT 214 (320)
T ss_dssp EEECCSS--SS---CCEEEETCCCGGGEEEEEEEEECSSB--TTBEEEECEEEETTEEEEST---------TCEEEEECT
T ss_pred EEEeCCC--CC---CeEEEEcccCHHHccCceEEEEcccC--CceEEEEeEEEECCEEeccC---------CCcEEEEEC
Confidence 9999985 23 8999999998 457799999999875 89999999999999887643 245799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||++++||++++++|.+++.+... .. ..+..+|... ..+|+|+|+|+|.+++|++++ |+... +..
T Consensus 215 Gtt~~~lP~~~~~~i~~~~~~~~~---~~-----g~~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~-y~~~~--~~~ 279 (320)
T 4aa9_A 215 GTSVLFGPSSDILKIQMAIGATEN---RY-----GEFDVNCGNL----RSMPTVVFEINGRDYPLSPSA-YTSKD--QGF 279 (320)
T ss_dssp TCSSEEEEHHHHHHHHHHTTCEEC---TT-----SCEEECGGGG----GGCCCEEEEETTEEEEECHHH-HEEEE--TTE
T ss_pred CCCcEECCHHHHHHHHHHhCCccc---CC-----CcEEEeCCCC----CcCceEEEEECCEEEEECHHH-hccCC--CCe
Confidence 999999999999999988854321 11 2233467654 368999999999999999999 88763 468
Q ss_pred EE-EEec-CCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LL-AVAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~-~~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|+ ++.. ...+.||||++|||++|+|||++++|||||+++
T Consensus 280 C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 280 CTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 98 4665 445689999999999999999999999999975
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=9.9e-55 Score=400.05 Aligned_cols=282 Identities=18% Similarity=0.255 Sum_probs=227.8
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE-------------ecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCce
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI-------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSV 67 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~-------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~ 67 (341)
+++|.||||||+++|+|||||+++||. |||++|+|++. ++|.|.+.|++|+.
T Consensus 18 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c~~~~~~y~~~~SsT~~~---------------~~~~~~i~Yg~Gs~ 82 (325)
T 2apr_A 18 YGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQA---------------DGRTWSISYGDGSS 82 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEE---------------EEEEEEEECTTSCE
T ss_pred EEEEEECCCCeEEEEEEcCCCCCEEEccCCCchHhcCCCCCCcccCCCeee---------------CCCEEEEEECCCCC
Confidence 378999999999999999999999993 45555555554 34899999999977
Q ss_pred eEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCC-------chHHhhhcc--c-CCce
Q 036636 68 TKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTI-------SFISQLGSI--I-KKRF 137 (341)
Q Consensus 68 ~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~--~-~~~F 137 (341)
+.|.+++|+|+| ++. .++++.|||++...+. ......+||||||+..+ +++.+|.++ + +++|
T Consensus 83 ~~G~~~~D~v~~----g~~-~v~~~~fg~~~~~~~~---f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~F 154 (325)
T 2apr_A 83 ASGILAKDNVNL----GGL-LIKGQTIELAKREAAS---FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIF 154 (325)
T ss_dssp EEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHH---HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEE
T ss_pred EEEEEEEEEEEE----CCE-EECcEEEEEEeccCcc---cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceE
Confidence 999999999999 887 8999999999886541 12245899999998764 467788776 4 6899
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+..... .|.|+|||+| .++.+++.|+|+... ..+|.|.+++|+|++. +.. ....+||||
T Consensus 155 S~~l~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~v~l~~i~vg~~-~~~----------~~~~~iiDS 219 (325)
T 2apr_A 155 GVYLGKAKNGG---GGEYIFGGYDSTKFKGSLTTVPIDNS-RGWWGITVDRATVGTS-TVA----------SSFDGILDT 219 (325)
T ss_dssp EEEECCGGGTC---CEEEEETCCCGGGBCSCCEEEECBCT-TSSCEEEECEEEETTE-EEE----------CCEEEEECT
T ss_pred EEEecCCCCCC---CCEEEEccCCchhccCceEEEEccCC-CCEEEEEEeEEEECCE-ecC----------CCceEEEec
Confidence 99997642233 8999999998 467899999999854 5899999999999983 321 145799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||++++||+++|+++.+++.+..... ..+..+|+.. .+|+|+|+|+|.+++||+++ |+.... +..
T Consensus 220 GTs~~~lP~~~~~~~~~~~~~~~~~~--------g~~~~~C~~~-----~~p~i~f~f~g~~~~ip~~~-~~~~~~-~~~ 284 (325)
T 2apr_A 220 GTTLLILPNNIAASVARAYGASDNGD--------GTYTISCDTS-----AFKPLVFSINGASFQVSPDS-LVFEEF-QGQ 284 (325)
T ss_dssp TCSSEEEEHHHHHHHHHHHTCEECSS--------SCEEECSCGG-----GCCCEEEEETTEEEEECGGG-GEEEEE-TTE
T ss_pred CCccEECCHHHHHHHHHHHhcccCCC--------CeEEEECCCC-----CCCcEEEEECCEEEEECHHH-EEEcCC-CCe
Confidence 99999999999999999997654311 1122367642 48999999999899999999 776544 568
Q ss_pred EEEE-ecCCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LLAV-APHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~~~-~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|++. ...+.+.||||++|||++|+|||++++|||||+++
T Consensus 285 C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 285 CIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 9864 44336689999999999999999999999999864
No 17
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.3e-54 Score=400.00 Aligned_cols=284 Identities=20% Similarity=0.313 Sum_probs=230.0
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++|
T Consensus 16 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~G- 79 (329)
T 1dpj_A 16 YTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKAN---------------GTEFAIQYGTG- 79 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE---------------EEEEEEEETTE-
T ss_pred EEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEEC---------------CcEEEEEECCc-
Confidence 37899999999999999999999999 4677777777653 48999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCch------HHhhhcc--c-CCce
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTISF------ISQLGSI--I-KKRF 137 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~------~~ql~~~--~-~~~F 137 (341)
++.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||+..+++ ..+|.++ + +++|
T Consensus 80 s~~G~~~~D~v~i----g~~-~~~~~~fg~~~~~~~~~--f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~F 152 (329)
T 1dpj_A 80 SLEGYISQDTLSI----GDL-TIPKQDFAEATSEPGLT--FAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRF 152 (329)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEECCHHH--HTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEE
T ss_pred eEEEEEEEEEEEE----CCe-EECCeEEEEEEecCccc--cccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEE
Confidence 8999999999999 877 99999999999865410 1235689999999987653 4556665 4 5899
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+....... +|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+.. .+..+||||
T Consensus 153 s~~l~~~~~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~----------~~~~aiiDS 219 (329)
T 1dpj_A 153 AFYLGDTSKDTEN-GGEATFGGIDESKFKGDITWLPVRRK--AYWEVKFEGIGLGDEYAEL----------ESHGAAIDT 219 (329)
T ss_dssp EEEECCGGGTCSS-SEEEEESSCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEEC----------SSCEEEECT
T ss_pred EEEecCCCCCCCC-CcEEEEcCCChhhcCCceEEEEcCCC--ceEEEEeeeEEECCeEecC----------CCccEEeeC
Confidence 9999875211111 7999999998 456789999999875 8999999999999987753 156799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeE
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFF 296 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~ 296 (341)
||++++||++++++|.+++.+... .. ..+..+|... ..+|+|+|+|+|.+++|++++ |+.+.+ ..
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~---~~-----g~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~-y~~~~~--~~ 284 (329)
T 1dpj_A 220 GTSLITLPSGLAEMINAEIGAKKG---WT-----GQYTLDCNTR----DNLPDLIFNFNGYNFTIGPYD-YTLEVS--GS 284 (329)
T ss_dssp TCSCEEECHHHHHHHHHHHTCEEC---TT-----SSEEECGGGG----GGCCCEEEEETTEEEEECTTT-SEEEET--TE
T ss_pred CCCcEECCHHHHHHHHHHhCCccC---CC-----CeEEEECCCC----CcCCcEEEEECCEEEEECHHH-hEecCC--CE
Confidence 999999999999999998854311 01 1122357543 368999999999999999999 888764 58
Q ss_pred EE-EEecC-----CCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 297 LL-AVAPH-----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 297 C~-~~~~~-----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|+ ++... ..+.||||++|||++|+|||++++|||||+++
T Consensus 285 C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 285 CISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 98 56542 35689999999999999999999999999875
No 18
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.5e-54 Score=405.26 Aligned_cols=304 Identities=17% Similarity=0.275 Sum_probs=234.8
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCceeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSVTKG 70 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~~~G 70 (341)
+++|.||||||+++|+|||||+++|| .|||++|+||+... |.|.+.|++| ++.|
T Consensus 16 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~~~f~~~~SsT~~~~~---------------~~~~i~Yg~G-s~~G 79 (383)
T 2ewy_A 16 YLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYIDTYFDTERSSTYRSKG---------------FDVTVKYTQG-SWTG 79 (383)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBSCCCCGGGCTTCEEEE---------------EEEEEECSSC-EEEE
T ss_pred EEEEEecCCCceEEEEEecCCCceEEecCCCCccccCcccccCccceeCC---------------ceEEEEECCc-EEEE
Confidence 47899999999999999999999999 48899999998754 8899999999 6799
Q ss_pred EEEEEEEEEEecCCCceeec-ceEEecccCCCCCcccccCCCcceeeecCCCCCc--------hHHhhhcc--cCCceEE
Q 036636 71 FAAHETISVIGKGEGKAIFH-GALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS--------FISQLGSI--IKKRFSY 139 (341)
Q Consensus 71 ~~~~D~v~i~~~~g~~~~~~-~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s--------~~~ql~~~--~~~~Fs~ 139 (341)
.+++|+|+| ++...+. .+.|++++...+.. ......+||||||++.++ ++.+|.++ ++++||+
T Consensus 80 ~~~~Dtv~i----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~ 153 (383)
T 2ewy_A 80 FVGEDLVTI----PKGFNTSFLVNIATIFESENFF--LPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSM 153 (383)
T ss_dssp EEEEEEEEE----TTTEEEEEEEEEEEEEEEESCS--CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCSCEEE
T ss_pred EEEEEEEEE----CCCccceeEEEEEEEEeeccee--eccCcCceEEecCchhcccccccccCHHHHHHHccCCCcceEE
Confidence 999999999 6531222 46688876544311 012467999999987653 44566655 5689999
Q ss_pred ecCCC------CCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCce
Q 036636 140 CLVIP------LPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGC 212 (341)
Q Consensus 140 ~l~~~------~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 212 (341)
||.+. .... .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+.++...+. ...+
T Consensus 154 ~l~~~~~~~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~a 223 (383)
T 2ewy_A 154 QMCGAGLPVAGSGTN---GGSLVLGGIEPSLYKGDIWYTPIKEE--WYYQIEILKLEIGGQSLNLDCREYN-----ADKA 223 (383)
T ss_dssp EECCC---------C---CEEEEETSCCGGGCCSCEEEEECSSB--TTBBCCEEEEEETTEECCCCTTTTT-----SSCE
T ss_pred EeeccccccccCCCC---CeEEEeCccchhhccCccEEEecCCC--ceEEEEEEEEEECCEEccccccccC-----CccE
Confidence 99642 1122 8999999998 567899999999875 8999999999999998876544332 4579
Q ss_pred EEccccceeeechHHHHHHHHHHHHHhhhcccc-cCCCCCCCCCceeecC-CCCCCCCeEEEEEcCc------EEEeeCC
Q 036636 213 IIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLA-QLSDCPEPIQLCYFLP-ETFNRFPSMAFYFEDA------NLRIDGE 284 (341)
Q Consensus 213 iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~C~~~~-~~~~~~P~i~f~f~g~------~~~i~~~ 284 (341)
||||||++++||+++|++|.+++.+........ ++. ..+...|+... .....+|+|+|+|+|. +++|+++
T Consensus 224 iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~ 301 (383)
T 2ewy_A 224 IVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFW--TGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQ 301 (383)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHH--HTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHH
T ss_pred EEEcCCccccCCHHHHHHHHHHHhhhcccccCccccc--cccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChH
Confidence 999999999999999999999998765321110 000 01245798764 2334689999999974 7999999
Q ss_pred CcEEEEcC---CCeEEEEE-ecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 285 NVFIIDYE---NHFFLLAV-APHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 285 ~~y~~~~~---~~~~C~~~-~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
+ |+.+.. .+..|+++ +....+.||||++|||++|+|||++++|||||+++|+..
T Consensus 302 ~-yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 302 L-YIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp H-HEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred H-heeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 9 887753 35689864 222235799999999999999999999999999999754
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.1e-54 Score=400.30 Aligned_cols=283 Identities=19% Similarity=0.259 Sum_probs=228.2
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE-------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCce
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA-------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSV 67 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv-------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~ 67 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.+. .|.|.+.|++|+.
T Consensus 18 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~y~~~~SsT~~~~~--------------~~~~~i~Yg~Gs~ 83 (329)
T 1oew_A 18 ITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVXQTIYTPSKSTTAKLLS--------------GATWSISYGDGSS 83 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-CCCBCGGGCTTCEEEE--------------EEEEEEECTTSCE
T ss_pred EEEEEECCCCeEEEEEECCCCCCeEEecCCCCccccccCccCCccCccceecC--------------CCeEEEEeCCCCc
Confidence 37899999999999999999999999 36777777777653 4899999999977
Q ss_pred eEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc---------hHHhhhccc-CCce
Q 036636 68 TKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS---------FISQLGSII-KKRF 137 (341)
Q Consensus 68 ~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s---------~~~ql~~~~-~~~F 137 (341)
+.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||+..++ +..+|.+++ +++|
T Consensus 84 ~~G~~~~D~v~~----g~~-~v~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~~F 156 (329)
T 1oew_A 84 SSGDVYTDTVSV----GGL-TVTGQAVESAKKVSSSF--TEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVF 156 (329)
T ss_dssp EEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHHH--HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTTSSSSEE
T ss_pred EEEEEEEEEEEE----CCE-EEeeeEEEEEEecCccc--cccCCCceEEEeccccccccCcCCCCCHHHHHHHhccCcEE
Confidence 999999999999 887 99999999999865411 011468999999987543 566777665 6899
Q ss_pred EEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcc
Q 036636 138 SYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDS 216 (341)
Q Consensus 138 s~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDT 216 (341)
|+||.+. . .|.|+|||+| .++.+++.|+|+... +.+|.|.+++|+|+++.+.. ....+||||
T Consensus 157 S~~L~~~---~---~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~~v~l~~i~v~~~~~~~----------~~~~aiiDS 219 (329)
T 1oew_A 157 TADLGYH---A---PGTYNFGFIDTTAYTGSITYTAVSTK-QGFWEWTSTGYAVGSGTFKS----------TSIDGIADT 219 (329)
T ss_dssp EEECCSS---S---CEEEEESCCCTTSSSSCCEEEECBCT-TSSCEEEEEEEEETTSCCEE----------EEEEEEECT
T ss_pred EEEccCC---C---CeEEEEeccChHhcccceEEEEccCC-CceEEEEEeeEEECCeeccC----------CCceEEEeC
Confidence 9999873 3 8999999998 567899999999854 58999999999999876531 145799999
Q ss_pred ccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEc-C-CC
Q 036636 217 GSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDY-E-NH 294 (341)
Q Consensus 217 Gtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~-~-~~ 294 (341)
||++++||++++++|.+++..... .... ..+..+|+. .+|+|+|+|+|.+++||+++ |+... + +.
T Consensus 220 GTt~~~lP~~~~~~l~~~i~~a~~--~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~ip~~~-~~~~~~~~~~ 286 (329)
T 1oew_A 220 GTTLLYLPATVVSAYWAQVSGAKS--SSSV----GGYVFPCSA------TLPSFTFGVGSARIVIPGDY-IDFGPISTGS 286 (329)
T ss_dssp TCCSEEECHHHHHHHHTTSTTCEE--ETTT----TEEEEETTC------CCCCEEEEETTEEEEECHHH-HEEEESSTTC
T ss_pred CCCCEECCHHHHHHHHHhCCCcEE--cCCC----CEEEEECCC------CCCcEEEEECCEEEEECHHH-eeeeecCCCC
Confidence 999999999999999887732211 0000 112246763 58999999999999999999 77664 2 24
Q ss_pred eEEEE-Eec-CCCCceeechhhccceEEEEEC-CCCEEEEEcC
Q 036636 295 FFLLA-VAP-HDDLVALIGSQQQRDTRFVYDL-NIDLLSFVKE 334 (341)
Q Consensus 295 ~~C~~-~~~-~~~~~~ilG~~fl~~~yvvfD~-~~~riGfa~~ 334 (341)
..|++ +.. ...+.||||++|||++|+|||+ +++|||||++
T Consensus 287 ~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 287 SSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 68986 555 3457899999999999999999 9999999974
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.8e-54 Score=399.99 Aligned_cols=281 Identities=19% Similarity=0.279 Sum_probs=226.3
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE-----------------------ecCCCCCCceeecCCCCCCCCCCCCCCCce
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI-----------------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCV 57 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~-----------------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~ 57 (341)
+++|.||||||+++|+|||||+++||. |||++|+|++.. +|.
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~---------------~~~ 79 (342)
T 3pvk_A 15 AADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL---------------NTP 79 (342)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE---------------EEE
T ss_pred EEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec---------------CCe
Confidence 378999999999999999999999993 344444444443 489
Q ss_pred eEEecCCCceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCC-------CchHHhhh
Q 036636 58 YTMKYADQSVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVT-------ISFISQLG 130 (341)
Q Consensus 58 ~~~~Y~~G~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~-------~s~~~ql~ 130 (341)
|.+.|++|+.+.|.+++|+|+| ++. .++++.|||++... ..+||||||+.. .+++.+|.
T Consensus 80 ~~i~Yg~gs~~~G~~~~D~v~i----g~~-~v~~~~fg~~~~~~---------~~~GilGLg~~~~~~~~~~~~~~~~L~ 145 (342)
T 3pvk_A 80 FKIGYGDGSSSQGTLYKDTVGF----GGV-SIKNQVLADVDSTS---------IDQGILGVGYKTNEAGGSYDNVPVTLK 145 (342)
T ss_dssp EEEECSSSCEEEEEEEEEEEEE----TTE-EEEEEEEEEEEEES---------SSSCEEECSCGGGCSSCSSCCHHHHHH
T ss_pred EEEEecCCCeEEEEEEEEEEEE----CCE-EecceEEEEEEccC---------CCccEEEecCccccccccCCcHHHHHH
Confidence 9999999977999999999999 887 99999999998754 468999999976 46888998
Q ss_pred cc--c-CCceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccc
Q 036636 131 SI--I-KKRFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITV 206 (341)
Q Consensus 131 ~~--~-~~~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~ 206 (341)
++ + +++||+||.+.. .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+...
T Consensus 146 ~qg~i~~~~fs~~l~~~~-~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~-------- 211 (342)
T 3pvk_A 146 KQGVIAKNAYSLYLNSPD-AA---TGQIIFGGVDNAKYSGSLIALPVTSD--RELRISLGSVEVSGKTINTD-------- 211 (342)
T ss_dssp HTTSSSSSEEEEECCCTT-CS---EEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETTEEEEEE--------
T ss_pred hcCCCCCceEEEEeCCCC-CC---CcEEEECccCccceeeeeEEeecCcc--ceEEEEEeEEEECCEEecCC--------
Confidence 87 4 589999998752 23 8999999988 567899999999986 79999999999999987642
Q ss_pred cCCCceEEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEc-CcEEEeeCCC
Q 036636 207 SGEGGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFE-DANLRIDGEN 285 (341)
Q Consensus 207 ~~~~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~-g~~~~i~~~~ 285 (341)
+..+||||||++++||++++++|.+++.+......... ..+..+|+. .|+|+|+|+ |.+++||+++
T Consensus 212 --~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~----~~~~~~C~~-------~p~i~f~f~~g~~~~vp~~~ 278 (342)
T 3pvk_A 212 --NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGN----SFYEVDCNL-------SGDVVFNFSKNAKISVPASE 278 (342)
T ss_dssp --EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSC----EEEEECSCC-------CSEEEEEESTTCEEEEEGGG
T ss_pred --CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCc----eEEEEecCC-------CCceEEEECCCCEEEEcHHH
Confidence 35799999999999999999999999965542110000 013346763 599999998 7999999999
Q ss_pred cEEEEcC--CC---eEEEEEecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 286 VFIIDYE--NH---FFLLAVAPHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 286 ~y~~~~~--~~---~~C~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
|+.+.. .+ ..|+..+.. .+.||||+.|||++|+|||++++|||||+++|...
T Consensus 279 -~~~~~~~~~g~~~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 3pvk_A 279 -FAASLQGDDGQPYDKCQLLFDV-NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSA 335 (342)
T ss_dssp -GEEC----------CEEESEEE-CTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred -heeeccccCCCcCCeeEEEEee-CCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCC
Confidence 887631 22 579744332 25799999999999999999999999999999853
No 21
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9.5e-54 Score=404.71 Aligned_cols=305 Identities=15% Similarity=0.217 Sum_probs=237.1
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCceeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSVTKG 70 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~~~G 70 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++... |.|.+.|++| ++.|
T Consensus 31 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~~~y~~~~SsT~~~~~---------------~~~~i~Yg~G-s~~G 94 (402)
T 3vf3_A 31 YVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR---------------KGVYVPYTQG-KWEG 94 (402)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEE---------------EEEEEECSSC-EEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEccCCCCcccCCcCcccCcccccCC---------------CEEEEEECcE-EEEE
Confidence 47899999999999999999999999 68999999998854 8999999999 6799
Q ss_pred EEEEEEEEEEecCCCceeec-ceEEecccCCCCCcccccCCCcceeeecCCCCC--------chHHhhhcc--cCCceEE
Q 036636 71 FAAHETISVIGKGEGKAIFH-GALFGCSNDNHGFDEDARDGALAGVLGLSRVTI--------SFISQLGSI--IKKRFSY 139 (341)
Q Consensus 71 ~~~~D~v~i~~~~g~~~~~~-~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--------s~~~ql~~~--~~~~Fs~ 139 (341)
.+++|+|+| ++...++ .+.|++++...+.. ......+||||||++.+ +++.+|.++ ++++||+
T Consensus 95 ~~~~D~v~i----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~ 168 (402)
T 3vf3_A 95 ELGTDLVSI----PHGPNVTVRANIAAITESDKFF--INGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSL 168 (402)
T ss_dssp EEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS--CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEE
T ss_pred EEEEEEEEE----CCccccceeeeEEEEEcccccc--ccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceEE
Confidence 999999999 6321333 34577776654411 11256899999998653 466677776 5689999
Q ss_pred ecCCCC---------CCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCC
Q 036636 140 CLVIPL---------PNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGE 209 (341)
Q Consensus 140 ~l~~~~---------~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~ 209 (341)
||.+.. ... .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+..+...+. .
T Consensus 169 ~l~~~~~~~~~~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~-----~ 238 (402)
T 3vf3_A 169 QLCGAGFPLNQSEVLASV---GGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN-----Y 238 (402)
T ss_dssp EECCCC----------------EEEEESSCCGGGEEEEEEEEECSSB--TTBEECEEEEEETTEECCCCGGGGG-----S
T ss_pred EeecccccccccccccCC---CCEEEeCCcCcccccCceEEEeCCcC--cEEEEEEeEEEECCEEecccccccC-----C
Confidence 997531 122 8999999998 457799999999875 8999999999999998876433321 4
Q ss_pred CceEEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecC-CCCCCCCeEEEEEcCc------EEEee
Q 036636 210 GGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLP-ETFNRFPSMAFYFEDA------NLRID 282 (341)
Q Consensus 210 ~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~P~i~f~f~g~------~~~i~ 282 (341)
..+||||||++++||++++++|.+++.+......... ..+..+...|+... .....+|+|+|+|+|. +++|+
T Consensus 239 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 317 (402)
T 3vf3_A 239 DKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPD-GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 317 (402)
T ss_dssp SCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCT-TGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCc-cccccccccccccccchHhhCCceEEEEecCCCCceEEEEEC
Confidence 6799999999999999999999999988754211111 00012356899865 3344699999999985 49999
Q ss_pred CCCcEEEEcCCC----eEEEEEec-CCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 283 GENVFIIDYENH----FFLLAVAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 283 ~~~~y~~~~~~~----~~C~~~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
|++ |+.+.... ..|+++.. ...+.||||++|||++|+|||++++|||||+++|+..
T Consensus 318 ~~~-yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 378 (402)
T 3vf3_A 318 PQQ-YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 378 (402)
T ss_dssp HHH-HEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCB
T ss_pred HHH-heehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcc
Confidence 999 98876431 58986432 3345899999999999999999999999999999964
No 22
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.5e-54 Score=405.92 Aligned_cols=302 Identities=16% Similarity=0.236 Sum_probs=234.6
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCceeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSVTKG 70 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~~~G 70 (341)
+++|.||||||+++|+|||||++||| .|||++|+||+... |.|.+.|++| ++.|
T Consensus 24 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~~~y~~~~SsT~~~~~---------------~~~~i~Yg~G-s~~G 87 (395)
T 2qp8_A 24 YVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR---------------KGVYVPYTQG-KWEG 87 (395)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEE---------------EEEEEECSSC-EEEE
T ss_pred EEEEEecCCCceEEEEEecCCCceEEECCCCccccCCcCcccCCCceeCC---------------ceEEEEECCc-EEEE
Confidence 37899999999999999999999999 48888999988754 8999999999 5699
Q ss_pred EEEEEEEEEEecCC-Cceeec-ceEEecccCCCCCcccccCCCcceeeecCCCCC--------chHHhhhcc--cCCceE
Q 036636 71 FAAHETISVIGKGE-GKAIFH-GALFGCSNDNHGFDEDARDGALAGVLGLSRVTI--------SFISQLGSI--IKKRFS 138 (341)
Q Consensus 71 ~~~~D~v~i~~~~g-~~~~~~-~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--------s~~~ql~~~--~~~~Fs 138 (341)
.+++|+|+| + +. .++ .+.|+++....+.. ......+||||||+..+ +++.+|.++ ++++||
T Consensus 88 ~~~~Dtv~i----g~g~-~~~~~~~~~~~~~~~~~f--~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS 160 (395)
T 2qp8_A 88 ELGTDLVSI----PHGP-NVTVRANIAAITESDKFF--INGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFS 160 (395)
T ss_dssp EEEEEEEEC----TTSC-SCEEEEEEEEEEEEESCS--CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEE
T ss_pred EEEeEEEEE----CCCC-CceEEEEEEEEEccCccc--ccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcceEE
Confidence 999999999 5 33 333 36677776543310 01246899999998754 355677766 568999
Q ss_pred EecCCCC---------CCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccC
Q 036636 139 YCLVIPL---------PNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSG 208 (341)
Q Consensus 139 ~~l~~~~---------~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~ 208 (341)
+||.+.. ... .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+.++...+.
T Consensus 161 ~~L~~~~~~~~~~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~~~~~----- 230 (395)
T 2qp8_A 161 LQLCGAGFPLNQSEVLASV---GGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN----- 230 (395)
T ss_dssp EEECCCSSCCCHHHHHHSC---CEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEECCCCGGGGG-----
T ss_pred EEeccccccccccccccCC---CcEEEECCcCcccccCceEEeccCCC--ceEEEEEEEEEECCEEcccCccccC-----
Confidence 9997631 012 8999999998 457799999999875 8999999999999998765443332
Q ss_pred CCceEEccccceeeechHHHHHHHHHHHHHhhhcccc-cCCCCCCCCCceeecC-CCCCCCCeEEEEEcCc------EEE
Q 036636 209 EGGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLA-QLSDCPEPIQLCYFLP-ETFNRFPSMAFYFEDA------NLR 280 (341)
Q Consensus 209 ~~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~C~~~~-~~~~~~P~i~f~f~g~------~~~ 280 (341)
...+||||||++++||+++|++|.+++.+........ ++. ......|+... .....+|+|+|+|+|. +++
T Consensus 231 ~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 308 (395)
T 2qp8_A 231 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFW--LGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 308 (395)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHH--TTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccc--ccccccccccccchHhhCCcEEEEEccCCCCceEEEE
Confidence 4579999999999999999999999998875421110 000 11235898765 3334699999999975 699
Q ss_pred eeCCCcEEEEcCC----CeEEEE--EecCCCCceeechhhccceEEEEECCCCEEEEEcCCCCCC
Q 036636 281 IDGENVFIIDYEN----HFFLLA--VAPHDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDD 339 (341)
Q Consensus 281 i~~~~~y~~~~~~----~~~C~~--~~~~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 339 (341)
|+|++ |+.+... ...|++ +.+. ...||||++|||++|+|||++++|||||+++|+..
T Consensus 309 l~p~~-yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 309 ILPQQ-YLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 371 (395)
T ss_dssp ECHHH-HEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred ECHHH-hEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCC
Confidence 99999 8877532 358974 3333 35799999999999999999999999999999864
No 23
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.1e-54 Score=398.11 Aligned_cols=286 Identities=16% Similarity=0.253 Sum_probs=231.1
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYAD 64 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~ 64 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++
T Consensus 21 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~ 85 (341)
T 3k1w_A 21 YGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHN---------------GTELTLRYST 85 (341)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEE---------------EEEEEEEETT
T ss_pred EEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeEC---------------CCEEEEEECC
Confidence 47899999999999999999999999 3667777777653 4899999999
Q ss_pred CceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CC
Q 036636 65 QSVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KK 135 (341)
Q Consensus 65 G~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~ 135 (341)
| ++.|.+++|+|+| ++. .+ ++.|||++...+.. ......+||||||++.++ ++.+|.++ + ++
T Consensus 86 g-s~~G~~~~D~v~i----g~~-~v-~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~ 156 (341)
T 3k1w_A 86 G-TVSGFLSQDIITV----GGI-TV-TQMFGEVTEMPALP--FMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKED 156 (341)
T ss_dssp E-EEEEEEEEEEEEE----TTE-EE-EEEEEEEEECCHHH--HTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSS
T ss_pred c-EEEEEEEEEEEEE----CCc-ee-eEEEEEEEEccccc--cccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCC
Confidence 9 5999999999999 887 88 99999999876510 123567999999997654 67778776 4 58
Q ss_pred ceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEE
Q 036636 136 RFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCII 214 (341)
Q Consensus 136 ~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 214 (341)
+||+||.+.........|.|+|||+| .++.+++.|+|+... .+|.|.+++|+++++.+... ....+||
T Consensus 157 ~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~---------~~~~~ii 225 (341)
T 3k1w_A 157 VFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSSTLLCE---------DGCLALV 225 (341)
T ss_dssp EEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST--TSCEEEECCEEETTEEEECT---------TCEEEEE
T ss_pred EEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC--CEEEEEEeEEEECCEEeecC---------CCCEEEE
Confidence 99999998631110117999999998 457799999999874 89999999999999875432 2457999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcC--
Q 036636 215 DSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYE-- 292 (341)
Q Consensus 215 DTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~-- 292 (341)
||||++++||++++++|.+++.+... . ..+..+|... ..+|+|+|+|+|.+++|++++ |+....
T Consensus 226 DsGtt~~~lP~~~~~~i~~~~~~~~~-------~--~g~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~-~~~~~~~~ 291 (341)
T 3k1w_A 226 DTGASYISGSTSSIEKLMEALGAKKR-------L--FDYVVKCNEG----PTLPDISFHLGGKEYTLTSAD-YVFQESYS 291 (341)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEEC-------S--SCEEEEGGGG----GGCCCEEEEETTEEEEECHHH-HBCCSCCC
T ss_pred ECCCChhcCCHHHHHHHHHHcCCeec-------C--CCeEEeCCCC----CcCCcEEEEECCEEEEECHHH-heeEccCC
Confidence 99999999999999999998854321 1 1133357643 368999999999999999999 887653
Q ss_pred CCeEEE-EEec-----CCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 293 NHFFLL-AVAP-----HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 293 ~~~~C~-~~~~-----~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
++..|+ ++.. ...+.||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 292 SKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp TTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 356898 5655 235689999999999999999999999999976
No 24
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.2e-54 Score=402.01 Aligned_cols=276 Identities=18% Similarity=0.287 Sum_probs=226.6
Q ss_pred eEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCce
Q 036636 2 VRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSV 67 (341)
Q Consensus 2 ~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~ 67 (341)
++|.||||||++.|+|||||+++|| .|||++|+|++.. +|.|.+.|++| +
T Consensus 66 ~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~G-s 129 (375)
T 1miq_A 66 GEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKD---------------GTKVDITYGSG-T 129 (375)
T ss_dssp CCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEE---------------EEEEEEEETTE-E
T ss_pred EEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEEC---------------CcEEEEEeCCC-e
Confidence 6799999999999999999999999 3555555555543 48999999999 5
Q ss_pred eEEEEEEEEEEEEecCCCceeecceEEecccC----CCCCcccccCCCcceeeecCCCCC------chHHhhhcc--c-C
Q 036636 68 TKGFAAHETISVIGKGEGKAIFHGALFGCSND----NHGFDEDARDGALAGVLGLSRVTI------SFISQLGSI--I-K 134 (341)
Q Consensus 68 ~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~--~-~ 134 (341)
+.|.+++|+|+| ++. .+++ .|||++. +.. ......+||||||++.+ +++.+|.++ + +
T Consensus 130 ~~G~~~~Dtv~i----g~~-~v~~-~Fg~~~~~~~~~~~----f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 199 (375)
T 1miq_A 130 VKGFFSKDLVTL----GHL-SMPY-KFIEVTDTDDLEPI----YSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDN 199 (375)
T ss_dssp EEEEEEEEEEEE----TTE-EEEE-EEEEEEECGGGTTH----HHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSS
T ss_pred EEEEEEEEEEEE----cCc-eECc-EEEEEEeccccccc----cccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCC
Confidence 899999999999 887 8999 9999998 432 12356899999999765 456777776 4 5
Q ss_pred CceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceE
Q 036636 135 KRFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCI 213 (341)
Q Consensus 135 ~~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i 213 (341)
++||+||.+.. .. +|.|+|||+| .++.+++.|+|+... .+|.|.++ |+|+++.+ . ...+|
T Consensus 200 ~~FS~~L~~~~-~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~-i~v~g~~~-~-----------~~~ai 260 (375)
T 1miq_A 200 ALFTFYLPVHD-VH---AGYLTIGGIEEKFYEGNITYEKLNHD--LYWQIDLD-VHFGKQTM-E-----------KANVI 260 (375)
T ss_dssp SEEEEECCTTC-TT---EEEEEESSCCGGGEEEEEEEEEBSSS--SSSEEEEE-EEETTEEE-E-----------EEEEE
T ss_pred CEEEEEecCCC-CC---CeEEEEcccCHHHcCCceEEEecCCC--ceEEEEEE-EEECCEEc-c-----------cceEE
Confidence 99999999863 23 8999999998 456799999999875 89999999 99999876 1 45799
Q ss_pred EccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcC-
Q 036636 214 IDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYE- 292 (341)
Q Consensus 214 iDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~- 292 (341)
|||||++++||++++++|.+++.+... ... ..+..+|+. ..+|+|+|+|+|..++|++++ |+....
T Consensus 261 iDSGTs~~~lP~~~~~~l~~~~~~~~~---~~~----g~~~~~C~~-----~~~P~i~f~f~g~~~~l~~~~-yi~~~~~ 327 (375)
T 1miq_A 261 VDSGTTTITAPSEFLNKFFANLNVIKV---PFL----PFYVTTCDN-----KEMPTLEFKSANNTYTLEPEY-YMNPILE 327 (375)
T ss_dssp ECTTBSSEEECHHHHHHHHHHHTCEEC---TTS----SCEEEETTC-----TTCCCEEEECSSCEEEECGGG-SEEESSS
T ss_pred ecCCCccEEcCHHHHHHHHHHhCCccc---CCC----CeEEEECCC-----CCCCcEEEEECCEEEEECHHH-hEeeccC
Confidence 999999999999999999999865321 110 223457875 368999999999999999999 988764
Q ss_pred -CCeEEE-EEecCC--CCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 293 -NHFFLL-AVAPHD--DLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 293 -~~~~C~-~~~~~~--~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
++..|+ ++.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 328 ~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 328 VDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 345898 677633 3689999999999999999999999999864
No 25
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-53 Score=394.20 Aligned_cols=286 Identities=16% Similarity=0.198 Sum_probs=227.8
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCceeEEEEEEEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSVTKGFAAHET 76 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~~~G~~~~D~ 76 (341)
+++|.||||||+++|+|||||+++|| .|+|++|+++. +|.|.+.|++| ++.|.+++|+
T Consensus 15 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~~y~~s~Ss~~~-----------------~~~~~i~Yg~G-s~~G~~~~Dt 76 (340)
T 1wkr_A 15 VVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKTSTSSAT-----------------SDKVSVTYGSG-SFSGTEYTDT 76 (340)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEECSSSCCCCCTTCEEE-----------------EEEEEEECSSC-EEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEeCCChhheecCCCccCCcCCcccc-----------------CceEEEEECCc-EEEEEEEEEE
Confidence 47899999999999999999999999 68888877643 38999999999 5999999999
Q ss_pred EEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc--------------hHHhhhcc--c-CCceEE
Q 036636 77 ISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS--------------FISQLGSI--I-KKRFSY 139 (341)
Q Consensus 77 v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s--------------~~~ql~~~--~-~~~Fs~ 139 (341)
|+| ++. +++++.|||++...+ +...+||||||+..++ ++.+|.++ + +++||+
T Consensus 77 v~~----g~~-~v~~~~fg~~~~~~~------~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~ 145 (340)
T 1wkr_A 77 VTL----GSL-TIPKQSIGVASRDSG------FDGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAV 145 (340)
T ss_dssp EEE----TTE-EEEEEEEEEEEEEES------CTTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEE
T ss_pred EEE----CCE-EEcceEEEEEEccCC------CcCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEEE
Confidence 999 887 999999999998654 2368999999987654 45666655 4 589999
Q ss_pred ecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCC--CCeeEEEEeeEEEcC-eeeecCCCCccccccCCCceEEc
Q 036636 140 CLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHP--NNFYYLSLKDISIDN-ERMNFPPDTFDITVSGEGGCIID 215 (341)
Q Consensus 140 ~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~--~~~~~v~l~~i~v~~-~~~~~~~~~~~~~~~~~~~~iiD 215 (341)
||.+...... ..|.|+|||+| .++.+++.|+|+...+ ..+|.|. .+|+|++ +.+.. +..+|||
T Consensus 146 ~l~~~~~~~~-~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~-----------~~~aiiD 212 (340)
T 1wkr_A 146 SFEPTTSESS-TNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS-----------STAGIVD 212 (340)
T ss_dssp ECCCCSSSSE-EEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE-----------EEEEEEC
T ss_pred EecCCCCCCC-CCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC-----------CCeEEEe
Confidence 9987421111 18999999998 4678999999998743 4799999 9999998 76632 3469999
Q ss_pred cccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcC---
Q 036636 216 SGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYE--- 292 (341)
Q Consensus 216 TGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~--- 292 (341)
|||++++||++++++|.+++.+... ... ..+..+|... ..+|+|+|+|+|.+++|+|++ |+.+..
T Consensus 213 SGTt~~~lP~~~~~~l~~~~~a~~~---~~~----g~~~~~C~~~----~~~p~i~f~f~g~~~~i~~~~-yi~~~~~~~ 280 (340)
T 1wkr_A 213 TGTTLTLIASDAFAKYKKATGAVAD---NNT----GLLRLTTAQY----ANLQSLFFTIGGQTFELTANA-QIWPRNLNT 280 (340)
T ss_dssp TTBCSEEECHHHHHHHHHHHTCEEC---TTT----SSEEECHHHH----HTCCCEEEEETTEEEEECTGG-GBCCGGGGG
T ss_pred CCcccccCCHHHHHHHHHhhCCEEc---CCC----CeEEeecccc----ccCCcEEEEECCEEEEEcHHH-hcccccccc
Confidence 9999999999999999887754322 000 1123367543 268999999999999999999 886542
Q ss_pred ----CCeEEE-EEec-C----CCCceeechhhccceEEEEECCCCEEEEEcCCCCCCC
Q 036636 293 ----NHFFLL-AVAP-H----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDDS 340 (341)
Q Consensus 293 ----~~~~C~-~~~~-~----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~~ 340 (341)
....|+ .+.+ . .+..||||++|||++|+|||++++|||||+++|....
T Consensus 281 ~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 281 AIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp GGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred ccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 123454 5654 1 2346999999999999999999999999999998653
No 26
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.8e-53 Score=408.48 Aligned_cols=306 Identities=15% Similarity=0.217 Sum_probs=239.7
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCceeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQSVTKG 70 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~~~~G 70 (341)
+++|.||||||+++|+|||||+++|| .|||++|+||+... |.|.+.|++| ++.|
T Consensus 77 ~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~cc~~~~~y~~~~SsT~~~~~---------------~~~~i~Yg~G-s~~G 140 (455)
T 3lpj_A 77 YVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR---------------KGVYVPYTQG-KWEG 140 (455)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEE---------------EEEEEECSSC-EEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCcceEEecccccccCCcccCCCCCCcccCC---------------ccEEEEeCCe-EEEE
Confidence 37899999999999999999999999 68999999998754 8999999999 6799
Q ss_pred EEEEEEEEEEecCCCceeec-ceEEecccCCCCCcccccCCCcceeeecCCCCC--------chHHhhhcc--cCCceEE
Q 036636 71 FAAHETISVIGKGEGKAIFH-GALFGCSNDNHGFDEDARDGALAGVLGLSRVTI--------SFISQLGSI--IKKRFSY 139 (341)
Q Consensus 71 ~~~~D~v~i~~~~g~~~~~~-~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--------s~~~ql~~~--~~~~Fs~ 139 (341)
.+++|+|+| ++...+. .+.|++++...... ......+||||||++.+ +++.+|.++ ++++||+
T Consensus 141 ~~~~Dtv~i----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~ 214 (455)
T 3lpj_A 141 ELGTDLVSI----PHGPNVTVRANIAAITESDKFF--INGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSL 214 (455)
T ss_dssp EEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS--CTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEE
T ss_pred EEEEEEEEE----CCCcceeeEEEEEEEEccCccc--ccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeEE
Confidence 999999999 5311222 36788887655411 11257899999998654 456677776 5689999
Q ss_pred ecCCCC---------CCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCC
Q 036636 140 CLVIPL---------PNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGE 209 (341)
Q Consensus 140 ~l~~~~---------~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~ 209 (341)
||.+.. ... .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+.++...+. .
T Consensus 215 ~L~~~~~~~~~~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~-----~ 284 (455)
T 3lpj_A 215 QLCGAGFPLNQSEVLASV---GGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN-----Y 284 (455)
T ss_dssp EECCCSSCCCHHHHHHSC---CEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEECCCCGGGGG-----S
T ss_pred EeccccccccccccccCC---CceEEECCcCcccccCceEEEecCCC--ceeEEEEeEEEECCEEccccccccC-----C
Confidence 997631 122 8999999998 557799999999875 8999999999999998876433321 5
Q ss_pred CceEEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecC-CCCCCCCeEEEEEcCc------EEEee
Q 036636 210 GGCIIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLP-ETFNRFPSMAFYFEDA------NLRID 282 (341)
Q Consensus 210 ~~~iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~P~i~f~f~g~------~~~i~ 282 (341)
..+||||||++++||++++++|.+++.+......... ..+..+..+|+... .....+|+|+|+|+|. +++|+
T Consensus 285 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~-~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 363 (455)
T 3lpj_A 285 DKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPD-GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 363 (455)
T ss_dssp SCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCH-HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred CeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCc-ccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEEC
Confidence 6799999999999999999999999988754211110 00012356899875 3344699999999986 49999
Q ss_pred CCCcEEEEcCCC----eEEEEEec-CCCCceeechhhccceEEEEECCCCEEEEEcCCCCCCC
Q 036636 283 GENVFIIDYENH----FFLLAVAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKENCSDDS 340 (341)
Q Consensus 283 ~~~~y~~~~~~~----~~C~~~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~c~~~~ 340 (341)
|++ |+...... ..|+++.. ...+.||||++|||++|+|||++++|||||+++|+...
T Consensus 364 ~~~-yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 425 (455)
T 3lpj_A 364 PQQ-YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 425 (455)
T ss_dssp HHH-HEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred HHH-heEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccccccc
Confidence 999 88875422 58987532 33468999999999999999999999999999998653
No 27
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.6e-53 Score=406.10 Aligned_cols=298 Identities=18% Similarity=0.271 Sum_probs=225.9
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE---------------ecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI---------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQ 65 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~---------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G 65 (341)
+++|.||||||+++|+|||||++|||+ |||++|+||+. .+|.|.+.|++|
T Consensus 55 ~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~---------------~~~~~~i~Yg~G 119 (478)
T 1qdm_A 55 FGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKK---------------NGKPAAIQYGTG 119 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBC---------------CCCEEEEEETTE
T ss_pred EEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeee---------------CCcEEEEEcCCC
Confidence 378999999999999999999999993 44444444443 468999999999
Q ss_pred ceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCch------HHhhhcc--c-CCc
Q 036636 66 SVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTISF------ISQLGSI--I-KKR 136 (341)
Q Consensus 66 ~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~------~~ql~~~--~-~~~ 136 (341)
++.|.+++|+|+| ++. .++++.||+++.+.+.. ......+||||||++.++. ..+|.++ + +++
T Consensus 120 -s~~G~~~~Dtv~i----g~~-~v~~~~Fg~a~~~~~~~--f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~ 191 (478)
T 1qdm_A 120 -SIAGYFSEDSVTV----GDL-VVKDQEFIEATKEPGIT--FLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPV 191 (478)
T ss_dssp -EEEEEEEEEEEEE----TTE-EEEEEEEEEEEECCBSH--HHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSE
T ss_pred -CeEEEEEEEEEEE----CCe-EECCEEEEEEEecCCcc--cccccccceecccccccccCCCCcHHHHHHHCCCCCCCE
Confidence 5999999999999 887 89999999999866521 1135679999999987653 4566665 4 589
Q ss_pred eEEecCCCCC-CCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEE
Q 036636 137 FSYCLVIPLP-NGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCII 214 (341)
Q Consensus 137 Fs~~l~~~~~-~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 214 (341)
||+||.+... .. +|.|+|||+| .++.+++.|+|+... ++|.|.+++|+|+++.+.+.. ++..+||
T Consensus 192 FS~~L~~~~~~~~---~G~l~fGg~d~~~~~G~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~--------~~~~aii 258 (478)
T 1qdm_A 192 FSFWLNRHVDEGE---GGEIIFGGMDPKHYVGEHTYVPVTQK--GYWQFDMGDVLVGGKSTGFCA--------GGCAAIA 258 (478)
T ss_dssp EEEECCCC--------CEEEEETCCCTTSEEEEEEEEEEEEE--TTEEEEECCEEETTEECSTTT--------TCEEEEE
T ss_pred EEEEeecCCCCCC---CeEEEeCCcCHhhcCCCceEEeccCC--CeEEEEEeEEEECCEEEeecC--------CCceEEE
Confidence 9999988531 22 8999999998 456799999999875 899999999999998765432 2567999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhh----------h--------------c-------ccccCC-------------CC
Q 036636 215 DSGSVLTYFHSDVYWKLHEKFVSYFE----------R--------------F-------QLAQLS-------------DC 250 (341)
Q Consensus 215 DTGtt~~~lp~~~~~~l~~~i~~~~~----------~--------------~-------~~~~~~-------------~~ 250 (341)
||||++++||++++++|.++|.+... . + ...... +.
T Consensus 259 DTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~ 338 (478)
T 1qdm_A 259 DSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDD 338 (478)
T ss_dssp CSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC------------------
T ss_pred cCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccccccccc
Confidence 99999999999999999998864210 0 0 000000 00
Q ss_pred C-----C---------------------------------CCCceeecC----------CCCCCCCeEEEEEcCcEEEee
Q 036636 251 P-----E---------------------------------PIQLCYFLP----------ETFNRFPSMAFYFEDANLRID 282 (341)
Q Consensus 251 ~-----~---------------------------------~~~~C~~~~----------~~~~~~P~i~f~f~g~~~~i~ 282 (341)
. . ....|+..+ .....+|+|+|+|+|+.++|+
T Consensus 339 ~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg~~~~l~ 418 (478)
T 1qdm_A 339 EPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALK 418 (478)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETTEEEEEC
T ss_pred cccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEECCEEEEEC
Confidence 0 0 001232222 012479999999999999999
Q ss_pred CCCcEEEEcCC--CeEEEE-Eec-C----CCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 283 GENVFIIDYEN--HFFLLA-VAP-H----DDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 283 ~~~~y~~~~~~--~~~C~~-~~~-~----~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
|++ |+..... +..|++ |.. + .++.||||++|||++|+|||++|+|||||+++
T Consensus 419 p~~-yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 419 PEE-YILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp HHH-HEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hHH-hEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999 9987653 358985 654 1 35689999999999999999999999999863
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-52 Score=386.43 Aligned_cols=280 Identities=17% Similarity=0.214 Sum_probs=224.0
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.|| ||+++|+|||||++||| .|||++|+ ++ .++|.|.+.|++|+
T Consensus 17 ~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~---------------~~~~~~~i~Yg~Gs 78 (325)
T 1ibq_A 17 LTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TK---------------LSGYSWDISYGDGS 78 (325)
T ss_dssp EEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EE---------------CTTCBEEEECSSSC
T ss_pred EEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Cc---------------cCCCEEEEEeCCCC
Confidence 3789999 99999999999999999 35555555 22 13689999999997
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc---------hHHhhhccc-CCc
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS---------FISQLGSII-KKR 136 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s---------~~~ql~~~~-~~~ 136 (341)
.+.|.+++|+|+| ++. .++++.|||++...+.. ......+||||||++.++ ++.+|.+++ +++
T Consensus 79 ~~~G~~~~D~v~i----g~~-~v~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~~~ 151 (325)
T 1ibq_A 79 SASGDVYRDTVTV----GGV-TTNKQAVEAASKISSEF--VQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQLDSPL 151 (325)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHHH--HTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSSSE
T ss_pred EEEEEEEEeEEEE----CCE-EEcceEEEEEEecCccc--cccCCCceEEEeCcccccccCcCCCCCHHHHHHHhcCCcE
Confidence 7999999999999 887 99999999999865411 111478999999987544 567887765 689
Q ss_pred eEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEc
Q 036636 137 FSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIID 215 (341)
Q Consensus 137 Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiD 215 (341)
||+||.+. . .|.|+|||+| .++.+++.|+|+... ..+|.|.+++|+++++.+.. ....+|||
T Consensus 152 FS~~l~~~---~---~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~w~v~l~~i~v~~~~~~~----------~~~~aiiD 214 (325)
T 1ibq_A 152 FAVQLKHD---A---PGVYDFGYIDDSKYTGSITYTDADSS-QGYWGFSTDGYSIGDGSSSS----------SGFSAIAD 214 (325)
T ss_dssp EEEEEETT---E---EEEEEESSCCGGGBSSCCEEEECBCT-TSSCEEEECEEEETTSCCBS----------CCEEEEEC
T ss_pred EEEEecCC---C---CceEEECCcChhhccCceEEEEcCCC-CceEEEEECcEEECCeeccC----------CCceEEEe
Confidence 99999873 3 8999999998 567899999999854 58999999999999986531 25679999
Q ss_pred cccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEc-C-C
Q 036636 216 SGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDY-E-N 293 (341)
Q Consensus 216 TGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~-~-~ 293 (341)
|||++++||++++++|.+++..... .... ..+..+|+. .+|+|+|+|+|++++||+++ |+... + +
T Consensus 215 SGTt~~~lP~~~~~~i~~~i~~a~~--~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~i~~~~-~~~~~~~~~ 281 (325)
T 1ibq_A 215 TGTTLILLDDEIVSAYYEQVSGAQE--SYEA----GGYVFSCST------DLPDFTVVIGDYKAVVPGKY-INYAPVSTG 281 (325)
T ss_dssp TTCCSEEECHHHHHHHHTTSTTCBC--CSSS----SSCEEETTC------CCCCEEEEETTEEEEECHHH-HEEEESSTT
T ss_pred CCCCcEeCCHHHHHHHHHhCCCceE--cCcC----CeEEEEcCC------CCCcEEEEECCEEEEECHHH-hcccccCCC
Confidence 9999999999999999888732211 0010 123336763 58999999999999999999 77664 3 3
Q ss_pred CeEEEE-Eec-CCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 294 HFFLLA-VAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 294 ~~~C~~-~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
...|+. +.. ...+.||||++|||++|+|||++++|||||+++
T Consensus 282 ~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 282 SSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp CSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 368986 555 335689999999999999999999999999864
No 29
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.4e-52 Score=385.39 Aligned_cols=279 Identities=18% Similarity=0.218 Sum_probs=222.9
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.|| ||+++|+|||||+++|| .|||++|+ ++. ++|.|.+.|++|+
T Consensus 18 ~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~---------------~~~~~~i~Yg~Gs 79 (323)
T 1izd_A 18 ITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKI---------------DGATWSISYGDGS 79 (323)
T ss_dssp EEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEE---------------EEEEEEEECTTSC
T ss_pred EEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-Ccc---------------CCCeEEEEcCCCC
Confidence 3789999 89999999999999999 36666555 332 2589999999997
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc---------hHHhhhccc-CCc
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS---------FISQLGSII-KKR 136 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s---------~~~ql~~~~-~~~ 136 (341)
.+.|.+++|+|+| ++. +++++.|||++...+.. ......+||||||++.++ +..+|.+++ +++
T Consensus 80 ~~~G~~~~D~v~i----g~~-~v~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~~~ 152 (323)
T 1izd_A 80 SASGDVYKDKVTV----GGV-SYDSQAVESAEKVSSEF--TQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPI 152 (323)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHHH--HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSSSE
T ss_pred eEEEEEEEEEEEE----CCE-EECceEEEEEEeccccc--cccCCCceEEecCcccccccCCCCCCCHHHHHHHhccCcE
Confidence 7999999999999 887 99999999999865411 011468999999987544 567777664 589
Q ss_pred eEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEc
Q 036636 137 FSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIID 215 (341)
Q Consensus 137 Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiD 215 (341)
||+||.+. . .|.|+|||+| .++.+++.|+|+... ..+|.|.+++|+|++ .+.. ....+|||
T Consensus 153 FS~~L~~~---~---~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~w~v~l~~i~v~~-~~~~----------~~~~aiiD 214 (323)
T 1izd_A 153 FAVALKHN---A---PGVYDFGYTDSSKYTGSITYTDVDNS-QGFWGFTADGYSIGS-DSSS----------DSITGIAD 214 (323)
T ss_dssp EEEECCTT---S---CEEEEESSCCTTSEEEEEEEEECBCT-TSSCEEEESEEEETT-EEEC----------CCEEEEEC
T ss_pred EEEEccCC---C---CCEEEECCcCccccccceEEEECCCC-CceEEEEECeEEECC-cccC----------CCceEEEe
Confidence 99999873 3 8999999998 456799999999854 589999999999999 5431 25579999
Q ss_pred cccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCe
Q 036636 216 SGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHF 295 (341)
Q Consensus 216 TGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~ 295 (341)
|||++++||++++++|.+++..... .... ..+..+|+. .+|+|+|+|+|++++||+++ |+....++.
T Consensus 215 SGTs~~~lp~~~~~~i~~~i~ga~~--~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~i~~~~-~~~~~~~~~ 281 (323)
T 1izd_A 215 TGTTLLLLDDSIVDAYYEQVNGASY--DSSQ----GGYVFPSSA------SLPDFSVTIGDYTATVPGEY-ISFADVGNG 281 (323)
T ss_dssp TTCCSEEECHHHHHHHHTTSTTCEE--ETTT----TEEEEETTC------CCCCEEEEETTEEEEECHHH-HEEEECSTT
T ss_pred CCCcceeCCHHHHHHHHHhCCCcEE--cCcC----CEEEEECCC------CCceEEEEECCEEEecCHHH-eEEecCCCC
Confidence 9999999999999999888732211 0000 112235763 58999999999999999999 877654466
Q ss_pred EEEE-Eec-CCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 296 FLLA-VAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 296 ~C~~-~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
.|++ +.+ +..+.||||++|||++|+|||++++|||||+++
T Consensus 282 ~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 282 QTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 8986 665 345689999999999999999999999999863
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.6e-53 Score=387.81 Aligned_cols=287 Identities=12% Similarity=0.115 Sum_probs=224.7
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEEecCCCCCCceeecCCCCCC--CC--------CCCCCCCceeEEecCCCceeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAIFDPRKSSSFQKINCDHPDC--TY--------FKCVNEQCVYTMKYADQSVTKG 70 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~y~p~~Sst~~~~~c~~~~C--~~--------~~c~~~~~~~~~~Y~~G~~~~G 70 (341)
+++|.|| ||+++|+|||||+++||... .|.+..| .. .++...++.|.+.|++| ++.|
T Consensus 20 ~~~i~iG--~Q~~~v~~DTGSs~lWv~~~----------~C~~~~C~~~~~~~y~~~~ST~~~~~~~~~i~Yg~G-s~~G 86 (330)
T 1yg9_A 20 AGITKIG--NQNFLTVFDSTSCNVVVASQ----------ECVGGACVCPNLQKYEKLKPKYISDGNVQVKFFDTG-SAVG 86 (330)
T ss_dssp EEEEEET--TEEEEEEEETTCCCEEEECT----------TCCSGGGGSTTCCCCCCSSCEEEEEEEEEEEETTTE-EEEE
T ss_pred EEEEEEC--CEEEEEEEeCCCcceEEecC----------CCCCccCcccccCccCCCCCceEECCCEEEEEECCc-eEEE
Confidence 3789999 99999999999999999421 2322233 11 01111347899999999 5699
Q ss_pred EEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc-------hHHhhhcc--cCCceEEec
Q 036636 71 FAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS-------FISQLGSI--IKKRFSYCL 141 (341)
Q Consensus 71 ~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s-------~~~ql~~~--~~~~Fs~~l 141 (341)
.+++|+|+| ++. +++++.|||++..... ......+||||||++.++ ++.+|.++ ++++||+||
T Consensus 87 ~~~~Dtv~i----g~~-~~~~~~fg~~~~~~~~---f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l 158 (330)
T 1yg9_A 87 RGIEDSLTI----SQL-TTSQQDIVLADELSQE---VCILSADVVVGIAAPGCPNALKGKTVLENFVEENLIAPVFSIHH 158 (330)
T ss_dssp EEEEEEEEE----TTE-EEEEEEEEEEEEECTH---HHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSSCSEEEEEE
T ss_pred EEEEEEEEE----CCE-EEcCeEEEEEEEcccc---cccccCceEEEcCcchhccccCCCCHHHHHHhcCCCCceEEEEE
Confidence 999999999 887 9999999999987321 113568999999998766 67778766 589999999
Q ss_pred CCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccce
Q 036636 142 VIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVL 220 (341)
Q Consensus 142 ~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~ 220 (341)
.+..... ..|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+.. .+..+||||||++
T Consensus 159 ~~~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~----------~~~~aiiDSGTs~ 224 (330)
T 1yg9_A 159 ARFQDGE--HFGEIIFGGSDWKYVDGEFTYVPLVGD--DSWKFRLDGVKIGDTTVAP----------AGTQAIIDTSKAI 224 (330)
T ss_dssp EECTTSC--EEEEEEETSCCGGGEEEEEEEEEBSCT--TSCCEECSEEEETTEEEEC----------TTCEEEECTTCSS
T ss_pred cCCCCCC--CCCEEEECCcCHHHccCceEEEECCCC--CEEEEEeCeEEECCEEEcC----------CCcEEEEecCCcc
Confidence 8853211 17999999998 456799999999864 8999999999999987641 2567999999999
Q ss_pred eeechHHHHHHHHHHHHHhhhcccccCCCCCCC-CCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCCCeEEE-
Q 036636 221 TYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEP-IQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYENHFFLL- 298 (341)
Q Consensus 221 ~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~~~~C~- 298 (341)
++||++++++|.+++.+... ..+ + ..+ ..+|... ..+|+|+|+|+|.+++|++++ |+... +..|+
T Consensus 225 ~~lP~~~~~~l~~~~~~~~~---~~g-~--~~~~~~~C~~~----~~~p~i~f~fgg~~~~l~~~~-y~~~~--~~~C~~ 291 (330)
T 1yg9_A 225 IVGPKAYVNPINEAIGCVVE---KTT-T--RRICKLDCSKI----PSLPDVTFVINGRNFNISSQY-YIQQN--GNLCYS 291 (330)
T ss_dssp EEEEHHHHHHHHHHHTCEEE---ECS-S--CEEEEECGGGG----GGSCCEEEEETTEEEEECHHH-HEEEE--TTEEEE
T ss_pred ccCCHHHHHHHHHHhCCccc---CCC-c--eEEEEEECCCc----cccCcEEEEECCEEEEECHHH-hcccC--CCcEEE
Confidence 99999999999999855321 110 0 012 3357653 368999999999999999999 88876 45898
Q ss_pred EEec-CCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 299 AVAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 299 ~~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
++.+ ...+.||||++|||++|+|||++++|||||+++
T Consensus 292 ~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 292 GFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp SEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 5655 345689999999999999999999999999874
No 31
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=8e-53 Score=400.58 Aligned_cols=278 Identities=19% Similarity=0.296 Sum_probs=225.6
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++|
T Consensus 141 ~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~---------------~~~~~i~YgdG- 204 (453)
T 2bju_A 141 YGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKD---------------GTKVEMNYVSG- 204 (453)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEE---------------EEEEEEECSSS-
T ss_pred EEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeEC---------------CcEEEEEcCCC-
Confidence 37899999999999999999999999 3555555555543 48999999999
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCC--CCcccccCCCcceeeecCCCCC------chHHhhhcc--c-CC
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNH--GFDEDARDGALAGVLGLSRVTI------SFISQLGSI--I-KK 135 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~--~-~~ 135 (341)
++.|.+++|+|++ |+. +++ +.|||++... +.. ......+||||||++.+ +++.+|.++ + ++
T Consensus 205 s~~G~~~~Dtv~i----g~~-~v~-~~Fg~a~~~~~~g~~--f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~ 276 (453)
T 2bju_A 205 TVSGFFSKDLVTV----GNL-SLP-YKFIEVIDTNGFEPT--YTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENA 276 (453)
T ss_dssp EEEEEEEEEEEEE----TTE-EEE-EEEEEEEECGGGTTH--HHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSC
T ss_pred CeEEEEEEEEEEE----eCc-EEE-EEEEEEEEecccCcc--ccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCC
Confidence 5899999999999 887 899 9999999876 411 11257899999998754 456777776 4 59
Q ss_pred ceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEE
Q 036636 136 RFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCII 214 (341)
Q Consensus 136 ~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 214 (341)
+||+||.+.. .. +|.|+|||+| .++.+++.|+|+... .+|.|.++ |+|++ .+ + ....+||
T Consensus 277 ~FS~~L~~~~-~~---~G~l~fGg~D~~~y~G~l~~~pv~~~--~~w~V~l~-I~Vgg-~~-~----------~~~~aIi 337 (453)
T 2bju_A 277 LFTFYLPVHD-KH---TGFLTIGGIEERFYEGPLTYEKLNHD--LYWQITLD-AHVGN-IM-L----------EKANCIV 337 (453)
T ss_dssp EEEEECCBTT-TB---CEEEEESSCCGGGEEEEEEEEEEEEE--TTEEEEEE-EEETT-EE-E----------EEEEEEE
T ss_pred EEEEEeCCCC-CC---CeEEEECCCCHHHcCCceEEEecCCC--ceEEEEEE-EEECc-EE-e----------ccccEEE
Confidence 9999999862 23 8999999998 456799999999875 89999999 99999 33 1 1457999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhhhcccccCCCCC-CCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcC-
Q 036636 215 DSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCP-EPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYE- 292 (341)
Q Consensus 215 DTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~- 292 (341)
||||++++||++++++|.+++.+.. ... . .+..+|+. ..+|+|+|+|+|.+++||+++ |+.+..
T Consensus 338 DSGTsl~~lP~~~~~~l~~~i~~~~---~~~-----g~~~~v~C~~-----~~~P~itf~fgg~~~~l~~~~-yi~~~~~ 403 (453)
T 2bju_A 338 DSGTSAITVPTDFLNKMLQNLDVIK---VPF-----LPFYVTLCNN-----SKLPTFEFTSENGKYTLEPEY-YLQHIED 403 (453)
T ss_dssp CTTCCSEEECHHHHHHHTTTSSCEE---CTT-----SSCEEEETTC-----TTCCCEEEECSSCEEEECHHH-HEEECTT
T ss_pred cCCCCeEecCHHHHHHHHHHhCCcc---cCC-----CceEEEecCC-----CCCCcEEEEECCEEEEECHHH-hEeeccc
Confidence 9999999999999999988875421 111 1 23457765 368999999999999999999 888764
Q ss_pred -CCeEEE-EEecCC--CCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 293 -NHFFLL-AVAPHD--DLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 293 -~~~~C~-~~~~~~--~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
++..|+ ++.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 404 ~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 404 VGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp TSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 346898 676633 4589999999999999999999999999875
No 32
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.1e-52 Score=400.19 Aligned_cols=277 Identities=14% Similarity=0.236 Sum_probs=225.9
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE--------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA--------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv--------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.||||||+++|++||||+++|| .|||++|+|++. .+|.|.+.|++|+
T Consensus 140 ~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~---------------~~~~f~i~YgdGs 204 (451)
T 3qvc_A 140 FGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEK---------------DDTPVKLTSKAGT 204 (451)
T ss_dssp EEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEE---------------EEEEEEEECSSEE
T ss_pred EEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCccccc---------------CCCEEEEEECCCE
Confidence 37899999999999999999999999 355566666554 2489999999994
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccC----CCCCcccccCCCcceeeecCCCCC------chHHhhhcc--c-
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSND----NHGFDEDARDGALAGVLGLSRVTI------SFISQLGSI--I- 133 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~--~- 133 (341)
+.|.+++|+|++ |+. .++ +.|||++. ..+ ......+||||||++.+ +++.+|.++ +
T Consensus 205 -~~G~~~~Dtv~i----gg~-~v~-~~Fg~a~~t~~~~~~----f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~ 273 (451)
T 3qvc_A 205 -ISGIFSKDLVTI----GKL-SVP-YKFIEMTEIVGFEPF----YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIE 273 (451)
T ss_dssp -EEEEEEEEEEEE----TTE-EEE-EEEEEEEEEEECTTH----HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSS
T ss_pred -EEEEEEEEEEEE----CCE-EEE-EEEEEEEeccccCCC----ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCC
Confidence 999999999999 887 899 99999988 543 12346799999998754 577888877 4
Q ss_pred CCceEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCce
Q 036636 134 KKRFSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGC 212 (341)
Q Consensus 134 ~~~Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 212 (341)
+++||+||.+.. .. .|.|+|||+| .++.+++.|+|+... .+|.|.++ |+++++ .. ....+
T Consensus 274 ~~~FS~~L~~~~-~~---~G~l~fGgiD~s~y~G~l~~~pv~~~--~~w~v~l~-I~Vgg~-~~-----------~~~~a 334 (451)
T 3qvc_A 274 QAVYSIYLPPEN-KN---KGYLTIGGIEERFFDGPLNYEKLNHD--LMWQVDLD-VHFGNV-SS-----------KKANV 334 (451)
T ss_dssp SSEEEEECCTTC-TT---EEEEEESSCCGGGEEEEEEEEECSST--TSSEEEEE-EEETTE-EE-----------EEEEE
T ss_pred CCEEEEEEcCCC-CC---CCEEEECCcchhhcCCceEEEEcccC--CeeEEEEE-EEECCc-cC-----------CCceE
Confidence 589999999862 23 8999999998 457799999999974 99999999 999987 11 14579
Q ss_pred EEccccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcC
Q 036636 213 IIDSGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYE 292 (341)
Q Consensus 213 iiDTGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~ 292 (341)
||||||++++||++++++|.+++.+... ... ..+..+|. . ..+|+|+|+|+|..++||+++ |+....
T Consensus 335 iiDSGTt~i~lP~~~~~~i~~~i~a~~~---~~~----g~y~v~C~-~----~~~P~itf~fgg~~i~lp~~~-yi~~~~ 401 (451)
T 3qvc_A 335 ILDSATSVITVPTEFFNQFVESASVFKV---PFL----SLYVTTCG-N----TKLPTLEYRSPNKVYTLEPKQ-YLEPLE 401 (451)
T ss_dssp EECTTBSSEEECHHHHHHHHTTTTCEEC---TTS----SCEEEETT-C----TTCCCEEEEETTEEEEECHHH-HEEECT
T ss_pred EEeCCCccccCCHHHHHHHHHHcCCeec---CCC----CeEEeeCC-c----CcCCcEEEEECCEEEEEcHHH-heeecc
Confidence 9999999999999999999888854321 000 22334675 2 468999999999999999999 888754
Q ss_pred --CCeEEE-EEecCC--CCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 293 --NHFFLL-AVAPHD--DLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 293 --~~~~C~-~~~~~~--~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
++..|+ ++.+.+ .+.||||++|||++|+|||.+++|||||+++
T Consensus 402 ~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 402 NIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp TTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 346787 566633 5789999999999999999999999999875
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.9e-52 Score=384.50 Aligned_cols=278 Identities=17% Similarity=0.229 Sum_probs=220.0
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEEE--------------ecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCCc
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYAI--------------FDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQS 66 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv~--------------y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G~ 66 (341)
+++|.|| ||+++|+|||||+++||. |||++|+ ++. ++|.|.+.|++|+
T Consensus 18 ~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~---------------~~~~~~i~Yg~Gs 79 (323)
T 1bxo_A 18 ITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KEL---------------SGYTWSISYGDGS 79 (323)
T ss_dssp EEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEE---------------EEEEEEEECTTSC
T ss_pred EEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-ccc---------------CCCeEEEEeCCCC
Confidence 3789999 999999999999999992 4444443 221 3589999999997
Q ss_pred eeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCC---------chHHhhhccc-CCc
Q 036636 67 VTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTI---------SFISQLGSII-KKR 136 (341)
Q Consensus 67 ~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~---------s~~~ql~~~~-~~~ 136 (341)
.+.|.+++|+|+| ++. +++++.|||++...+.. ......+||||||++.+ +++.+|.+++ +++
T Consensus 80 ~~~G~~~~D~v~i----g~~-~v~~~~fg~~~~~~~~~--~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~~ 152 (323)
T 1bxo_A 80 SASGNVFTDSVTV----GGV-TAHGQAVQAAQQISAQF--QQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPL 152 (323)
T ss_dssp EEEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHHH--HTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGGBSSSE
T ss_pred eEEEEEEEEEEEE----CCE-EECcEEEEEEEecCccc--ccCCCCceEEEeCcccccccccCCCCCHHHHHHHhcCCcE
Confidence 7999999999999 887 89999999999865411 01146899999998654 3567777665 589
Q ss_pred eEEecCCCCCCCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEc
Q 036636 137 FSYCLVIPLPNGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIID 215 (341)
Q Consensus 137 Fs~~l~~~~~~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiD 215 (341)
||+||.+. . .|.|+|||+| .++.+++.|+|+... ..+|.|.+++|+|++ ... ....+|||
T Consensus 153 FS~~L~~~---~---~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~w~v~l~~i~v~~-~~~-----------~~~~aiiD 213 (323)
T 1bxo_A 153 FAVALKHQ---Q---PGVYDFGFIDSSKYTGSLTYTGVDNS-QGFWSFNVDSYTAGS-QSG-----------DGFSGIAD 213 (323)
T ss_dssp EEEECCSS---S---CEEEEESSCCGGGBSSCCEEEECBCT-TSSCEEEEEEEEETT-EEE-----------EEEEEEEC
T ss_pred EEEEEeCC---C---CceEEEeCcChhhccCceEEEECCCC-CCeEEEEEeeEEECC-ccC-----------CCceEEEe
Confidence 99999873 3 8999999998 467899999999854 589999999999998 211 14579999
Q ss_pred cccceeeechHHHHHHHHHHHHHhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcC-CC
Q 036636 216 SGSVLTYFHSDVYWKLHEKFVSYFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYE-NH 294 (341)
Q Consensus 216 TGtt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~-~~ 294 (341)
|||++++||++++++|.+++..... .... ..+..+|+. .+|+|+|+|+|.+++||+++ |+.... ++
T Consensus 214 SGTs~~~lP~~~~~~l~~~i~~a~~--~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~l~~~~-~~~~~~~~~ 280 (323)
T 1bxo_A 214 TGTTLLLLDDSVVSQYYSQVSGAQQ--DSNA----GGYVFDCST------NLPDFSVSISGYTATVPGSL-INYGPSGDG 280 (323)
T ss_dssp TTCSSEEECHHHHHHHHTTSTTCEE--ETTT----TEEEECTTC------CCCCEEEEETTEEEEECHHH-HEEEECSSS
T ss_pred CCCCceeCCHHHHHHHHHhCCCceE--cCcC----CEEEEECCC------CCceEEEEECCEEEEECHHH-eEEeccCCC
Confidence 9999999999999999888732211 0010 112235763 58999999999999999999 877653 34
Q ss_pred eEEEE-Eec-CCCCceeechhhccceEEEEECCCCEEEEEcCC
Q 036636 295 FFLLA-VAP-HDDLVALIGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 295 ~~C~~-~~~-~~~~~~ilG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
..|+. +.+ ...+.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 281 STCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 68986 655 345689999999999999999999999999864
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=5.9e-40 Score=288.51 Aligned_cols=201 Identities=19% Similarity=0.293 Sum_probs=165.1
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE---------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA---------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYADQ 65 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv---------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~G 65 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.+.+.|++|
T Consensus 16 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~---------------~~~~~i~Yg~G 80 (239)
T 1b5f_A 16 FGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKEN---------------GTFGAIIYGTG 80 (239)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEE---------------EEEEEEECSSC
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeC---------------CcEEEEEECCC
Confidence 37899999999999999999999999 3666666666653 48899999999
Q ss_pred ceeEEEEEEEEEEEEecCCCceeecceEEecccCCCCCcccccCCCcceeeecCCCCCc--hHHhhhcc--c-CCceEEe
Q 036636 66 SVTKGFAAHETISVIGKGEGKAIFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS--FISQLGSI--I-KKRFSYC 140 (341)
Q Consensus 66 ~~~~G~~~~D~v~i~~~~g~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s--~~~ql~~~--~-~~~Fs~~ 140 (341)
++.|.+++|+|++ ++. .++++.|||++...+.. ......+||||||+..++ +..+|.++ + +++||+|
T Consensus 81 -s~~G~~~~D~v~~----g~~-~v~~~~fg~~~~~~~~~--f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~~~~FS~~ 152 (239)
T 1b5f_A 81 -SITGFFSQDSVTI----GDL-VVKEQDFIEATDEADNV--FLHRLFDGILGLSFQTISVPVWYNMLNQGLVKERRFSFW 152 (239)
T ss_dssp -EEEEEEEEEEEEE----TTE-EEEEEEEEEEEEECHHH--HTTCSCCEEEECSCCSSSCCHHHHHHHTTCCSSSEEEEE
T ss_pred -cEEEEEEEEEEEE----CCc-EEccEEEEEEEeccCcc--ccccCcceEEecCccccccHHHHHHHHCCCCCCCEEEEE
Confidence 5899999999999 887 89999999998765310 123568999999998876 34456555 3 5899999
Q ss_pred cCCCCC-CCCCcceeEEEcCCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEcccc
Q 036636 141 LVIPLP-NGEYTSSYLKFGTDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGS 218 (341)
Q Consensus 141 l~~~~~-~~~~~~G~l~fGg~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGt 218 (341)
|.+... .. .|.|+|||+| .++.+++.|+|+... .+|.|.+++|+|+++.+.+.. ....+||||||
T Consensus 153 l~~~~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~--------~~~~aiiDTGT 219 (239)
T 1b5f_A 153 LNRNVDEEE---GGELVFGGLDPNHFRGDHTYVPVTYQ--YYWQFGIGDVLIGDKSTGFCA--------PGCQAFADSGT 219 (239)
T ss_dssp ECCSCSSSC---CEEEEETSCCGGGEEEEEEEEEEEEE--TTEEEEECCEEETTEECCTTT--------TCEEEEECTTC
T ss_pred EeCCCCCCC---CeEEEECCcChhhccCceEEEEcccC--CeEEEEeeEEEECCEEecccC--------CCCEEEEecCc
Confidence 988531 22 8999999998 456789999999875 899999999999998875432 24579999999
Q ss_pred ceeeechHHHHHHHHHHHH
Q 036636 219 VLTYFHSDVYWKLHEKFVS 237 (341)
Q Consensus 219 t~~~lp~~~~~~l~~~i~~ 237 (341)
++++||++++++|.+++.+
T Consensus 220 t~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 220 SLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSEEECHHHHHHHHHHTTC
T ss_pred chhhCCHHHHHHHHHHhCC
Confidence 9999999999999988753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.2e-38 Score=280.73 Aligned_cols=220 Identities=15% Similarity=0.218 Sum_probs=174.9
Q ss_pred eecceEEecccCCCCCcccccCCCcceeeecCCCCCc------hHHhhhcc--c-CCceEEecCCCCCCCCCcceeEEEc
Q 036636 88 IFHGALFGCSNDNHGFDEDARDGALAGVLGLSRVTIS------FISQLGSI--I-KKRFSYCLVIPLPNGEYTSSYLKFG 158 (341)
Q Consensus 88 ~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~~Fs~~l~~~~~~~~~~~G~l~fG 158 (341)
+++++.|||++.+.+.. ......+||||||++.++ ++.+|.++ + +++||+||.+..... . .|.|+||
T Consensus 4 ~v~~~~Fg~~~~~~~~~--f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~-~-~G~l~fG 79 (241)
T 1lya_B 4 KVERQVFGEATKQPGIT--FIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQ-P-GGELMLG 79 (241)
T ss_dssp EEEEEEEEEEEECCSST--TTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCS-S-CEEEEET
T ss_pred EECCeEEEEEEEccCCc--cccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCC-C-CcEEEEC
Confidence 88999999999876521 123578999999997654 56677766 4 699999998863221 1 7999999
Q ss_pred CCC-CCCCCCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeechHHHHHHHHHHHH
Q 036636 159 TDM-GYRRPSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSDVYWKLHEKFVS 237 (341)
Q Consensus 159 g~d-~~~~~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~~~~~l~~~i~~ 237 (341)
|+| .++.+++.|+|+... .+|.|.+++|+++++.+... ....+||||||+++++|++++++|.+++.+
T Consensus 80 g~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 148 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTRK--AYWQVHLDQVEVASGLTLCK---------EGCEAIVDTGTSLMVGPVDEVRELQKAIGA 148 (241)
T ss_dssp SCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTSCEEST---------TCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CcCHHHcCCceEEEECccc--cEEEEEEeEEEECCeeEecc---------CCCEEEEECCCccccCCHHHHHHHHHHhCC
Confidence 998 457799999999875 89999999999998865321 256799999999999999999999998855
Q ss_pred HhhhcccccCCCCCCCCCceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCC--CeEEE-EEecC-----CCCcee
Q 036636 238 YFERFQLAQLSDCPEPIQLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYEN--HFFLL-AVAPH-----DDLVAL 309 (341)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~--~~~C~-~~~~~-----~~~~~i 309 (341)
... .. ..+..+|+.. ..+|+|+|+|+|++++|++++ |+..... +..|+ ++.+. ..+.||
T Consensus 149 ~~~---~~-----g~~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~-y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 149 VPL---IQ-----GEYMIPCEKV----STLPAITLKLGGKGYKLSPED-YTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp EEE---ET-----TEEEEEGGGG----GGSCCEEEEETTEEEEECTTT-SEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred eec---cC-----CcEEEECCCC----ccCCeEEEEECCEEEEECHHH-hEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 321 11 2233468754 268999999999999999999 8877642 46898 47652 356899
Q ss_pred echhhccceEEEEECCCCEEEEEcCC
Q 036636 310 IGSQQQRDTRFVYDLNIDLLSFVKEN 335 (341)
Q Consensus 310 lG~~fl~~~yvvfD~~~~riGfa~~~ 335 (341)
||++|||++|+|||++++|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.75 E-value=2.7e-18 Score=128.24 Aligned_cols=63 Identities=27% Similarity=0.521 Sum_probs=56.6
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE----------------EecCCCCCCceeecCCCCCCCCCCCCCCCceeEEecCC
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA----------------IFDPRKSSSFQKINCDHPDCTYFKCVNEQCVYTMKYAD 64 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv----------------~y~p~~Sst~~~~~c~~~~C~~~~c~~~~~~~~~~Y~~ 64 (341)
+++|.||||||+++|+|||||+++|| .|||++|+|++.. +|.|.+.|++
T Consensus 16 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~---------------~~~~~i~Yg~ 80 (97)
T 1lya_A 16 YGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKN---------------GTSFDIHYGS 80 (97)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEE---------------EEEEEEECSS
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeC---------------CCcEEEEECC
Confidence 37899999999999999999999999 3777788887764 3899999999
Q ss_pred CceeEEEEEEEEEEE
Q 036636 65 QSVTKGFAAHETISV 79 (341)
Q Consensus 65 G~~~~G~~~~D~v~i 79 (341)
| ++.|.+++|+|+|
T Consensus 81 G-s~~G~~~~Dtv~i 94 (97)
T 1lya_A 81 G-SLSGYLSQDTVSV 94 (97)
T ss_dssp C-EEEEEEEEEEEEE
T ss_pred c-EEEEEEEEEEEEE
Confidence 9 5999999999999
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.70 E-value=9.8e-18 Score=123.01 Aligned_cols=76 Identities=16% Similarity=0.267 Sum_probs=63.1
Q ss_pred CceeecCCCCCCCCeEEEEEcCcEEEeeCCCcEEEEcCC--CeEEE-EEecC----CCCceeechhhccceEEEEECCCC
Q 036636 255 QLCYFLPETFNRFPSMAFYFEDANLRIDGENVFIIDYEN--HFFLL-AVAPH----DDLVALIGSQQQRDTRFVYDLNID 327 (341)
Q Consensus 255 ~~C~~~~~~~~~~P~i~f~f~g~~~~i~~~~~y~~~~~~--~~~C~-~~~~~----~~~~~ilG~~fl~~~yvvfD~~~~ 327 (341)
.+|... ..+|+|+|+|+|++++|+|++ |+..... ...|+ ++.+. ..+.||||++|||++|+|||.+++
T Consensus 5 v~C~~~----~~~P~i~f~~gg~~~~l~~~~-yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 5 VDCNTL----SSMPNVSFTIGGKKFGLTPEQ-YILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp ECGGGG----GGCCCEEEEETTEEEEECHHH-HEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTT
T ss_pred EECCCC----CcCCcEEEEECCEEEEECHHH-hEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCC
Confidence 367653 268999999999999999999 8887542 36898 46652 356899999999999999999999
Q ss_pred EEEEEcCC
Q 036636 328 LLSFVKEN 335 (341)
Q Consensus 328 riGfa~~~ 335 (341)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=95.22 E-value=0.055 Score=42.57 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=25.1
Q ss_pred CceeechhhccceEEEEECCCCEEEEEc
Q 036636 306 LVALIGSQQQRDTRFVYDLNIDLLSFVK 333 (341)
Q Consensus 306 ~~~ilG~~fl~~~yvvfD~~~~riGfa~ 333 (341)
...|||..||+++-+..|..++++-|..
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 3589999999999999999999998853
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.23 E-value=0.092 Score=41.38 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=26.2
Q ss_pred CCceeechhhccceEEEEECCCCEEEEEcC
Q 036636 305 DLVALIGSQQQRDTRFVYDLNIDLLSFVKE 334 (341)
Q Consensus 305 ~~~~ilG~~fl~~~yvvfD~~~~riGfa~~ 334 (341)
....|||..||+++-.+.|.+++++-|.+.
T Consensus 106 ~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 106 PMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 346899999999999999999999988653
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.39 E-value=0.62 Score=36.33 Aligned_cols=23 Identities=22% Similarity=0.265 Sum_probs=19.1
Q ss_pred eEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 2 VRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 2 ~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
+++.|+ .+++++++|||++.+-+
T Consensus 29 v~v~In--G~~~~~LvDTGAs~s~i 51 (148)
T 2i1a_A 29 INIEIN--NYPVKAFVDTGAQTTIM 51 (148)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEE
T ss_pred EEEEEC--CEEEEEEEECCCCcccc
Confidence 456665 57999999999999877
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=81.88 E-value=3.7 Score=31.99 Aligned_cols=23 Identities=9% Similarity=0.252 Sum_probs=19.3
Q ss_pred eEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 2 VRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 2 ~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
+++.|. .+++++++|||++.+.+
T Consensus 27 v~~~In--g~~v~~LVDTGAs~s~I 49 (148)
T 3s8i_A 27 INCKVN--GHPLKAFVDSGAQMTIM 49 (148)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEE
T ss_pred EEEEEC--CEEEEEEEeCCCCcEee
Confidence 455665 68999999999999988
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=80.13 E-value=1.3 Score=32.14 Aligned_cols=24 Identities=29% Similarity=0.324 Sum_probs=21.2
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
++.+.|| .|.+.+++|||..++-+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl 33 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTII 33 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEE
Confidence 3678888 69999999999999988
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.64 E-value=1.2 Score=32.65 Aligned_cols=24 Identities=21% Similarity=0.290 Sum_probs=21.2
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
++.+.|| .|.+.+++|||+.++-+
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl 33 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVL 33 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEE
Confidence 3678888 69999999999999988
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.87 E-value=1.6 Score=32.30 Aligned_cols=26 Identities=19% Similarity=0.392 Sum_probs=22.4
Q ss_pred CeEEeec---CCCCeEEEEEEcCCCeeEE
Q 036636 1 MVRLFIG---TPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 1 ~~~i~iG---tP~q~~~v~~DTGSs~lwv 26 (341)
++.|.|| +|+|.+..++|||..++-+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl 40 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVI 40 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEE
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEE
Confidence 3567777 7899999999999999987
No 45
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=73.77 E-value=2.2 Score=30.83 Aligned_cols=24 Identities=29% Similarity=0.412 Sum_probs=21.0
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
++.+.|| .|.+..++|||..++-+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl 33 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIV 33 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEE
T ss_pred eEEEEEC--CEEEEEEEecCCCceEE
Confidence 3678888 69999999999999977
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=68.20 E-value=3 Score=31.08 Aligned_cols=21 Identities=24% Similarity=0.545 Sum_probs=19.1
Q ss_pred EeecCCCCeEEEEEEcCCCeeEE
Q 036636 4 LFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 4 i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
+.|| .|.+..++|||.+++-+
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi 38 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVL 38 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEE
T ss_pred EEEC--CEEEEEEecCCCCcEEE
Confidence 7888 69999999999999987
No 47
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=64.75 E-value=5.6 Score=28.39 Aligned_cols=16 Identities=25% Similarity=0.297 Sum_probs=14.2
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 4999999999999965
No 48
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=64.42 E-value=4.4 Score=30.00 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=21.2
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
++.+.|| .|.+..++|||.+++-+
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi 34 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTII 34 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEE
T ss_pred eEEEEEC--CEEEEEEEccCCCceEE
Confidence 3678888 69999999999999988
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=50.08 E-value=10 Score=28.83 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=20.0
Q ss_pred eEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 2 VRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 2 ~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
+.+.|+ .|....++|||.+++-+
T Consensus 25 v~i~I~--G~~~~~LlDTGAd~tVl 47 (132)
T 3slz_A 25 ITLKVG--GQPVTFLVDTGAQHSVL 47 (132)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEE
T ss_pred EEEEEC--CEEEEEEEeCCCCeEEE
Confidence 567777 68999999999999987
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=47.45 E-value=11 Score=30.90 Aligned_cols=24 Identities=29% Similarity=0.319 Sum_probs=21.1
Q ss_pred CeEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 1 MVRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 1 ~~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
++.+.|| .|.+..++|||.+++-+
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl 33 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVI 33 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEE
T ss_pred eEEEEEC--CEEEEEEEecCCCceEE
Confidence 3678888 69999999999999987
No 51
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=42.10 E-value=22 Score=31.16 Aligned_cols=44 Identities=20% Similarity=0.328 Sum_probs=27.3
Q ss_pred CceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeechH
Q 036636 167 STQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSD 226 (341)
Q Consensus 167 ~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~ 226 (341)
++.-.||.......|.+ .|+||.- +..+ .++||||++.+++|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP-----~q~~--------~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTP-----PQEF--------TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTT-----TEEE--------EEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEE---EEEECCC-----CeEE--------EEEEeCCccceEEcCC
Confidence 34456666532356664 4666632 2222 4999999999999865
No 52
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=40.07 E-value=26 Score=31.24 Aligned_cols=45 Identities=18% Similarity=0.174 Sum_probs=29.8
Q ss_pred CCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeechH
Q 036636 166 PSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSD 226 (341)
Q Consensus 166 ~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~ 226 (341)
|.+...|+.......|.+ .|+||.- +.. ..++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~~~~Y~~---~i~iGtP-----~q~--------~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAI---PVSIGTP-----GQD--------FYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETTTTEEEE---EEEETTT-----TEE--------EEEEEETTCCCCEEEBT
T ss_pred CccceEEeecCCCCEEEE---EEEECCC-----CcE--------EEEEEcCCCCCeEECCC
Confidence 566677887632356665 4667632 221 24999999999999965
No 53
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=38.88 E-value=15 Score=27.58 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=15.0
Q ss_pred CCeEEEEEEcCCCeeEE
Q 036636 10 SKGVLLILDTGSALIYA 26 (341)
Q Consensus 10 ~q~~~v~~DTGSs~lwv 26 (341)
.|.+..++|||.+++-+
T Consensus 29 gq~~eaLLDTGAD~TVl 45 (124)
T 2rsp_A 29 SVYITALLDSGADITII 45 (124)
T ss_dssp EEEEEEEECTTCSSCEE
T ss_pred CEEEEEEecCCCCcEEE
Confidence 46779999999999988
No 54
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.96 E-value=31 Score=30.19 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=27.2
Q ss_pred CCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeechH
Q 036636 166 PSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSD 226 (341)
Q Consensus 166 ~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~ 226 (341)
+.+.-.|+..+ ..|.+ .|+||.+.. .++||||++.+++|..
T Consensus 4 g~v~~~~~~~~--~~Y~~---~i~iG~Q~~---------------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 4 GVATNTPTAND--EEYIT---PVTIGGTTL---------------NLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEEEECGGG--SCEEE---EEEETTEEE---------------EEEEETTCCCEEECBT
T ss_pred CceeeeecCCC--CEEEE---EEEECCEEE---------------EEEEeCCCcceEEecC
Confidence 34445555443 56664 466773332 3999999999999975
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=35.43 E-value=39 Score=29.54 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=26.7
Q ss_pred CCceeeeeecCCCCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeechH
Q 036636 166 PSTQATKFINHPNNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSD 226 (341)
Q Consensus 166 ~~~~~~pl~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~ 226 (341)
+.+.-.|+..+ ..|.+ .|+||.+.. .++||||++.+++|..
T Consensus 4 ~~v~~~~~~~~--~~Y~~---~i~iG~q~~---------------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSND--EEYIT---QVTVGDDTL---------------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGG--CCEEE---EEEETTEEE---------------EEEEETTCCCEEECBT
T ss_pred CceeeeEcCCC--CEEEE---EEEECCEEE---------------EEEEcCCCcceEEecC
Confidence 34444555433 56664 466773332 3999999999999975
No 56
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=34.02 E-value=34 Score=25.91 Aligned_cols=25 Identities=8% Similarity=0.373 Sum_probs=19.4
Q ss_pred eEEEcCeeeecCCCCccccccCCCceEEccccceeeechH
Q 036636 187 DISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSD 226 (341)
Q Consensus 187 ~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~ 226 (341)
.++++|+.+ .+++|||+..+.|++.
T Consensus 26 ~i~I~G~~~---------------~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 26 TLKVGGQPV---------------TFLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEETTEEE---------------EEEECTTCSSCEECSC
T ss_pred EEEECCEEE---------------EEEEeCCCCeEEEccc
Confidence 377777754 3899999999998853
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=33.50 E-value=30 Score=28.86 Aligned_cols=16 Identities=31% Similarity=0.505 Sum_probs=14.1
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 29 TVIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCcceEEEcC
Confidence 4999999999999864
No 58
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=32.93 E-value=41 Score=29.39 Aligned_cols=16 Identities=31% Similarity=0.316 Sum_probs=14.3
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 28 HLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEETTCCCEEEECT
T ss_pred EEEEeCCCccceEeeC
Confidence 3999999999999875
No 59
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=31.47 E-value=46 Score=30.38 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=28.3
Q ss_pred CCceeeeeecCC-CCeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeechH
Q 036636 166 PSTQATKFINHP-NNFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHSD 226 (341)
Q Consensus 166 ~~~~~~pl~~~~-~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~~ 226 (341)
.+-...|+..+. ...|.+ .|.+|. |+..+ .++||||++++++|-.
T Consensus 6 ~~~~~~pv~~d~~~~~Y~~---~i~iGT-----Ppq~~--------~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 6 PSALVVPVKKDASTLQYVT---TINQRT-----PLVSE--------NLVVDLGGRFLWVDCD 51 (413)
T ss_dssp CSEEEEEEEECTTTCCEEE---EEEETT-----TTEEE--------EEEEETTCSSEEEECS
T ss_pred CccEEEEeeecCCCCeEEE---EEEcCC-----CCcce--------EEEEeCCChhhhcccC
Confidence 444557777654 345553 355553 22222 4999999999999953
No 60
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=30.09 E-value=36 Score=29.90 Aligned_cols=16 Identities=31% Similarity=0.374 Sum_probs=13.9
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 28 TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCceEEecC
Confidence 4899999999999854
No 61
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=29.63 E-value=37 Score=29.81 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=13.9
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 28 TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEcCCCCCEEEecC
Confidence 4999999999999853
No 62
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=29.63 E-value=35 Score=25.21 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=24.3
Q ss_pred CeeEEEEeeEEEcCeeeecCCCCccccccCCCceEEccccceeeech
Q 036636 179 NFYYLSLKDISIDNERMNFPPDTFDITVSGEGGCIIDSGSVLTYFHS 225 (341)
Q Consensus 179 ~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGtt~~~lp~ 225 (341)
..|+=.+. +.++|+... +++|||+-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 35666677 999998653 89999998888875
No 63
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=28.84 E-value=40 Score=30.59 Aligned_cols=16 Identities=6% Similarity=0.221 Sum_probs=14.1
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 37 ~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 37 PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEETTCSSEEEECS
T ss_pred EEEEECCCCceeECCC
Confidence 4999999999999854
No 64
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=27.08 E-value=45 Score=29.07 Aligned_cols=16 Identities=31% Similarity=0.424 Sum_probs=14.3
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 28 KVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEEeCCCcceEEecC
Confidence 4999999999999965
No 65
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=26.83 E-value=45 Score=29.34 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=13.8
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 28 NVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCCeEEecC
Confidence 4999999999999844
No 66
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=26.70 E-value=46 Score=29.26 Aligned_cols=16 Identities=31% Similarity=0.600 Sum_probs=14.0
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~lWv~~~ 43 (340)
T 1wkr_A 28 SLLVDTGSSNTWLGAD 43 (340)
T ss_dssp EEEEETTCCCCEECSS
T ss_pred EEEEeCCChhheecCC
Confidence 4999999999999863
No 67
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=26.10 E-value=40 Score=27.57 Aligned_cols=23 Identities=30% Similarity=0.293 Sum_probs=20.1
Q ss_pred eEEeecCCCCeEEEEEEcCCCeeEE
Q 036636 2 VRLFIGTPSKGVLLILDTGSALIYA 26 (341)
Q Consensus 2 ~~i~iGtP~q~~~v~~DTGSs~lwv 26 (341)
+.+.|| .|....++|||..++-+
T Consensus 115 ~~iki~--Gq~~e~LlDTGAD~TVl 137 (203)
T 3ka2_A 115 VTIRIG--GQLKEALLDTGADDTVI 137 (203)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEE
T ss_pred EEEEEC--CEEEeeeecccCCceee
Confidence 567787 59999999999999877
No 68
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=25.97 E-value=35 Score=30.66 Aligned_cols=15 Identities=33% Similarity=0.421 Sum_probs=13.7
Q ss_pred ceEEccccceeeech
Q 036636 211 GCIIDSGSVLTYFHS 225 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~ 225 (341)
.++||||++.+++|.
T Consensus 72 ~v~~DTGSs~lWV~s 86 (370)
T 3psg_A 72 TVIFDTGSSNLWVPS 86 (370)
T ss_dssp EEEEETTCCCEEEEB
T ss_pred EEEEeCCCCccEEEC
Confidence 499999999999996
No 69
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=24.89 E-value=51 Score=28.92 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=13.9
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.+++|||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 28 NVIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEECCCcceEEEcC
Confidence 4899999999999854
No 70
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=24.77 E-value=49 Score=29.89 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=14.4
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 77 ~vi~DTGSs~lWV~s~ 92 (383)
T 2x0b_A 77 KVVFDTGSSNVWVPSS 92 (383)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCCeEEecc
Confidence 4999999999999975
No 71
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=24.37 E-value=59 Score=28.44 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=14.2
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 34 ~v~~DTGSs~~Wv~~~ 49 (341)
T 3k1w_A 34 KVVFDTGSSNVWVPSS 49 (341)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCcceEEccC
Confidence 4899999999999864
No 72
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=24.33 E-value=42 Score=29.16 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=14.2
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 27 ~v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 27 TVVFDTGSSDLWVPSI 42 (320)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEcCC
Confidence 4999999999999864
No 73
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.16 E-value=56 Score=28.64 Aligned_cols=16 Identities=25% Similarity=0.117 Sum_probs=14.1
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 31 ~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 31 LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp EEEEETTCCCEEEECT
T ss_pred EEEEeCCCcceEEecC
Confidence 3999999999999864
No 74
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=23.75 E-value=51 Score=28.81 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=14.2
Q ss_pred ceEEccccceeeechH
Q 036636 211 GCIIDSGSVLTYFHSD 226 (341)
Q Consensus 211 ~~iiDTGtt~~~lp~~ 226 (341)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 29 KVILDTGSSNLWVPSN 44 (329)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCcCeEEecC
Confidence 4999999999999865
No 75
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=23.08 E-value=57 Score=26.93 Aligned_cols=24 Identities=25% Similarity=0.486 Sum_probs=18.6
Q ss_pred EEeecCC----CCeEEEEEEcCCCeeEE
Q 036636 3 RLFIGTP----SKGVLLILDTGSALIYA 26 (341)
Q Consensus 3 ~i~iGtP----~q~~~v~~DTGSs~lwv 26 (341)
.|.||.- .....+++|||++.+++
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~l 134 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVG 134 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEE
T ss_pred EEEECCeeEeccCCCEEEEECCCccccC
Confidence 4566642 35678999999999998
Done!