BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036639
(670 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 171/300 (57%), Gaps = 22/300 (7%)
Query: 349 KQFELEDLLRAS-----AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARK-EFEQY 402
K+F L +L AS +LG+G G VYK L DG +VAVKRLK+ + +F+
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++I H N+++LR + E+LLVY Y+ NGS+ S L R + PLDW R +
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRI 136
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-----PVQAI 517
LG+ARGLA +H ++ K+ H +VK++N+LLD+ A + DFGL+ L++ A+
Sbjct: 137 ALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 518 ARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
G+ APE + S+K DV+ +GV+LLE++TG+ R D++ +D
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL---ARLANDDDVMLLD-- 250
Query: 578 KWVRSVVKEEWTAEVFDQELL-RYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIE 636
WV+ ++KE+ + D +L YK+ EE+ ++ V L C S P +RP M+EV +M+E
Sbjct: 251 -WVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 171/300 (57%), Gaps = 22/300 (7%)
Query: 349 KQFELEDLLRAS-----AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARK-EFEQY 402
K+F L +L AS +LG+G G VYK L DG +VAVKRLK+ + +F+
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++I H N+++LR + E+LLVY Y+ NGS+ S L R + PLDW R +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRI 144
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-----PVQAI 517
LG+ARGLA +H ++ K+ H +VK++N+LLD+ A + DFGL+ L++ A+
Sbjct: 145 ALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 518 ARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
G+ APE + S+K DV+ +GV+LLE++TG+ R D++ +D
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL---ARLANDDDVMLLD-- 258
Query: 578 KWVRSVVKEEWTAEVFDQELL-RYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIE 636
WV+ ++KE+ + D +L YK+ EE+ ++ V L C S P +RP M+EV +M+E
Sbjct: 259 -WVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 148/290 (51%), Gaps = 21/290 (7%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
++G G G VYK VL DG VA+KR + +EFE ++ + +HP++V L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+ E +L+Y Y+ NG+L L+G+ P + + W R+ + +GAARGL +H T +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLH----TRAI 160
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLS-----LLLNPVQAIAR-LGGYKAPEQAEVKRLSQ 536
H +VKS N+LLD+N V I+DFG+S L + + + GY PE RL++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQE 596
K+DVYSFGV+L EVL R+ P + V+L +W ++ D
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLP--------REMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 597 LLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIE-DIRVEQSPL 645
L K E L + C+ E RP+M +V +E +R+++S +
Sbjct: 273 LAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 148/290 (51%), Gaps = 21/290 (7%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
++G G G VYK VL DG VA+KR + +EFE ++ + +HP++V L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+ E +L+Y Y+ NG+L L+G+ P + + W R+ + +GAARGL +H T +
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLH----TRAI 160
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLS-----LLLNPVQAIAR-LGGYKAPEQAEVKRLSQ 536
H +VKS N+LLD+N V I+DFG+S L + + + GY PE RL++
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQE 596
K+DVYSFGV+L EVL R+ P + V+L +W ++ D
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLP--------REMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 597 LLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIE-DIRVEQSPL 645
L K E L + C+ E RP+M +V +E +R+++S +
Sbjct: 273 LAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 344 FYERKK---QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA----R 396
FYE K F+ E + +G+G G VYK +++ VAVK+L +
Sbjct: 17 FYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELK 74
Query: 397 KEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDW 456
++F+Q + V+ K +H N+V+L + ++ LVY Y+PNGSL L + G PL W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 457 TTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL---SLLLNP 513
R + GAA G+ +H+ + H ++KS+N+LLD+ A ISDFGL S
Sbjct: 133 HMRCKIAQGAANGINFLHENHHI----HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 514 VQAIARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEE 570
+R+ G Y APE A ++ K+D+YSFGV+LLE++TG P VDE
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG----------LPAVDEH 237
Query: 571 -EQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMA 629
E + L +E+ + D+++ + E +M V C+ + KRP +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIK 295
Query: 630 EVAKMIEDI 638
+V ++++++
Sbjct: 296 KVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 344 FYERKK---QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA----R 396
FYE K F+ E + +G+G G VYK +++ VAVK+L +
Sbjct: 17 FYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELK 74
Query: 397 KEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDW 456
++F+Q + V+ K +H N+V+L + ++ LVY Y+PNGSL L + G PL W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 457 TTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL---SLLLNP 513
R + GAA G+ +H+ + H ++KS+N+LLD+ A ISDFGL S
Sbjct: 133 HMRCKIAQGAANGINFLHENHHI----HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 514 VQAIARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEE 570
R+ G Y APE A ++ K+D+YSFGV+LLE++TG P VDE
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG----------LPAVDEH 237
Query: 571 -EQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMA 629
E + L +E+ + D+++ + E +M V C+ + KRP +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIK 295
Query: 630 EVAKMIEDI 638
+V ++++++
Sbjct: 296 KVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 344 FYERKK---QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA----R 396
FYE K F+ E + +G+G G VYK +++ VAVK+L +
Sbjct: 11 FYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELK 68
Query: 397 KEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDW 456
++F+Q + V+ K +H N+V+L + ++ LVY Y+PNGSL L + G PL W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 126
Query: 457 TTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL----LLN 512
R + GAA G+ +H+ + H ++KS+N+LLD+ A ISDFGL+
Sbjct: 127 HMRCKIAQGAANGINFLHENHHI----HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 513 PVQAIARLG--GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEE 570
V +G Y APE A ++ K+D+YSFGV+LLE++TG P VDE
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG----------LPAVDEH 231
Query: 571 -EQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMA 629
E + L +E+ + D+++ + E +M V C+ + KRP +
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIK 289
Query: 630 EVAKMIEDI 638
+V ++++++
Sbjct: 290 KVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 35/286 (12%)
Query: 365 GKGSLGTVYKAVLDDGGIVAVKRLKDANPCA----RKEFEQYMDVIGKLKHPNVVKLRAY 420
G+G G VYK +++ VAVK+L +++F+Q + V K +H N+V+L +
Sbjct: 31 GEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
++ LVY Y PNGSL L + G PL W R + GAA G+ +H+ +
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI- 146
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGL---SLLLNPVQAIARLGG---YKAPEQAEVKRL 534
H ++KS+N+LLD+ A ISDFGL S +R+ G Y APE A +
Sbjct: 147 ---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEI 202
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
+ K+D+YSFGV+LLE++TG P VDE + P+ + + +E E
Sbjct: 203 TPKSDIYSFGVVLLEIITG----------LPAVDEHRE----PQLLLDIKEEIEDEEKTI 248
Query: 595 QELLRYKNIEEELVSM---LHVGLACVVSQPEKRPTMAEVAKMIED 637
++ + K + + S+ V C+ + KRP + +V +++++
Sbjct: 249 EDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 39/282 (13%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARK--EFEQYMDVIGKLKHPNVVKLRA 419
E +G GS GTV++A G VAVK L + + A + EF + + ++ +L+HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+V +YL GSL+ LLH + R LD R+S+ A+G+ +H
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR--N 157
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLL----LNPVQAIARLGGYKAPEQAEVKRLS 535
+ H N+KS N+L+DK + DFGLS L ++ A + APE + +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 536 QKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVF 593
+K+DVYSFGV+L E+ T + P + P+ V + + +++P
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP---------------- 261
Query: 594 DQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMI 635
+N+ ++ +++ C ++P KRP+ A + ++
Sbjct: 262 -------RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLL 293
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 46/294 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V+ A + VAVK +K + + + F +V+ L+H +VKL A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGR-IP--LDWTTRISLVLGAARGLARIHQEYGTA 480
KE ++ +++ GSL L + G + +P +D++ +I A G+A I Q
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQR---- 303
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ + V I+DFGL+ ++ + AR G + APE +
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL+E++T GR P YP + P V +R++ +
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIP--YPGMSNPEV------------IRALER--------G 401
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPLGEE 648
+ R +N EEL +++ + C ++PE+RPT + +++D EE
Sbjct: 402 YRMPRPENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLDDFYTATESQXEE 452
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 39/282 (13%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARK--EFEQYMDVIGKLKHPNVVKLRA 419
E +G GS GTV++A G VAVK L + + A + EF + + ++ +L+HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+V +YL GSL+ LLH + R LD R+S+ A+G+ +H
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNR--N 157
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG----YKAPEQAEVKRLS 535
+ H ++KS N+L+DK + DFGLS L ++ + APE + +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 536 QKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVF 593
+K+DVYSFGV+L E+ T + P + P+ V + + +++P
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP---------------- 261
Query: 594 DQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMI 635
+N+ ++ +++ C ++P KRP+ A + ++
Sbjct: 262 -------RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLL 293
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 46/284 (16%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V+ A + VAVK +K + + + F +V+ L+H +VKL A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGR-IP--LDWTTRISLVLGAARGLARIHQEYGTA 480
KE ++ +++ GSL L + G + +P +D++ +I A G+A I Q
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQR---- 130
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ + V I+DFGL+ ++ + AR G + APE +
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL+E++T GR P YP + P V +R++ +
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIP--YPGMSNPEV------------IRALER--------G 228
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R +N EEL +++ + C ++PE+RPT + +++D
Sbjct: 229 YRMPRPENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK N + + F Q V+ KL+H +V+L A +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 302
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL L+ + AR G + APE A R + K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 363 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 402
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 403 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 445
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIVAVKRLKDANPCARKE-FEQYMDVIGKLKHPNVVKLR 418
E++G G G VY+A D+ + A + D + E Q + LKHPN++ LR
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV ++ G L+ +L G R P I ++W +I ARG+ +H E
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDE-A 125
Query: 479 TAKVPHGNVKSSNVLLDK--------NGVACISDFGLSLLLNPVQAIARLGGYK--APEQ 528
+ H ++KSSN+L+ + N + I+DFGL+ + ++ G Y APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
S+ +DV+S+GVLL E+LTG P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 73 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 124
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H N++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R V
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYRMV----------- 226
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R N EEL ++ + C +PE RPT + ++ED
Sbjct: 227 ----RPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVER----MNY 301
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 362 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 401
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 402 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVER----MNY 301
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 362 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 401
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 402 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVER----MNY 384
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSP-TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 445 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 484
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 485 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVER----MNY 301
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 362 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 401
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 402 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 85 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 136
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 236
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 237 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 86 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 137
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 237
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 238 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 276
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 134
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 234
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 235 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R V
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYRMV----------- 230
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R N EEL ++ + C +PE RPT + ++ED
Sbjct: 231 ----RPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVER----MNY 125
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 186 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 225
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 226 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 268
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 228
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 229 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 78 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 129
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R V
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYRMV----------- 231
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R N EEL ++ + C +PE RPT + ++ED
Sbjct: 232 ----RPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 268
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 87 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 138
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 238
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 239 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 277
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 79 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 130
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R V
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYRMV----------- 232
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R N EEL ++ + C +PE RPT + ++ED
Sbjct: 233 ----RPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 40/283 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAK 481
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 78 -TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER----N 129
Query: 482 VPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQ 536
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 537 KADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR-------------- 228
Query: 596 ELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 229 -MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 82 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 133
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 233
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 234 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 134
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYR------------- 234
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++R N EEL ++ + C +PE RPT + ++ED
Sbjct: 235 --MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R V
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYRMV----------- 230
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R N EEL ++ + C +PE RPT + ++ED
Sbjct: 231 ----RPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVER----MNY 128
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 189 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 228
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 229 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G G V+ + VAVK LK + + F +++ +L+H +V+L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+E ++ +Y+ NGSL L + P I L + + A G+A I +
Sbjct: 72 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 123
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ I+DFGL+ L+ + AR G + APE +
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL E++T GR P YP T P V + +L + R V
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQ-----NLERGYRMV----------- 225
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R N EEL ++ + C +PE RPT + ++ED
Sbjct: 226 ----RPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVER----MNY 132
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 193 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 232
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 233 -------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 50/292 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIP--LDWTTRISLVLGAARGLARIHQEYGTA 480
+E +V +Y+ GSL L G G R+P +D + +I A G+A + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI------ASGMAYVER----M 130
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R +
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVF 593
K+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP---------------- 232
Query: 594 DQELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C +PE+RPT + +ED P
Sbjct: 233 ---------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 124
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 185 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 224
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 225 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 267
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 126
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 187 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 226
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 227 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 269
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ GSL L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H ++ ++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ G L L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 56/284 (19%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V+ A + VAVK +K + + + F +V+ L+H +VKL A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGR-IP--LDWTTRISLVLGAARGLARIHQEYGTA 480
KE ++ +++ GSL L + G + +P +D++ +I A G+A I Q
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQR---- 297
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLS 535
H +++++N+L+ + V I+DFGL AR+G + APE +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGL----------ARVGAKFPIKWTAPEAINFGSFT 347
Query: 536 QKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFD 594
K+DV+SFG+LL+E++T GR P YP + P V +R++ +
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIP--YPGMSNPEV------------IRALER--------G 385
Query: 595 QELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R +N EEL +++ + C ++PE+RPT + +++D
Sbjct: 386 YRMPRPENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG+G G V+ + VA+K LK + + F Q V+ KL+H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V +Y+ G L L G G R+P + + A G+A + +
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVER----MNY 135
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++++N+L+ +N V ++DFGL+ L+ + AR G + APE A R + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E+ T GR P YP R +D+ E+ +P
Sbjct: 196 SDVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP------------------ 235
Query: 596 ELLRYKNIEEELVSMLH-VGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
E LH + C PE+RPT + +ED P
Sbjct: 236 -------CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V+ + VA+K LK + + F + ++ KLKH +V+L A +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVV-S 74
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+E +V +Y+ GSL L G GR L + + A G+A I +
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKD--GEGR-ALKLPNLVDMAAQVAAGMAYIER----MNYI 127
Query: 484 HGNVKSSNVLLDKNGVAC-ISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQK 537
H +++S+N+L+ NG+ C I+DFGL+ L+ + AR G + APE A R + K
Sbjct: 128 HRDLRSANILVG-NGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEE-EQAVDLPKWVRSVVKEEWTAEVFDQ 595
+DV+SFG+LL E++T GR P YP V E+ E+ +P
Sbjct: 187 SDVWSFGILLTELVTKGRVP--YPGMNNREVLEQVERGYRMP------------------ 226
Query: 596 ELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSP 644
++ +S+ + + C PE+RPT + +ED P
Sbjct: 227 ------CPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
+++G G G V L G VA+K LK R++F ++G+ HPNV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L +++ +++ NGSL S L N G T I LV G RG+A +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVIQLV-GMLRGIAAGMKY 150
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL-----NPVQAIARLGG-----YKAP 526
H ++ + N+L++ N V +SDFGLS L +P A LGG + AP
Sbjct: 151 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA-LGGKIPIRWTAP 209
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
E + ++ + +DV+S+G+++ EV++ + + ++ EQ LP
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 260
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
E++G G G V + L G VA+K LK R+EF ++G+ +HPN+++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L +++ +++ NG+L S L N G T I LV G RG+A +
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-------FTVIQLV-GMLRGIASGMRY 133
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL-----NPVQAIARLGG-----YKAP 526
H ++ + N+L++ N V +SDFGLS L +P + + LGG + AP
Sbjct: 134 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET-SSLGGKIPIRWTAP 192
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
E ++ + +D +S+G+++ EV++ + + ++ EQ LP
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP 243
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 125/260 (48%), Gaps = 48/260 (18%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCAR-------KEFEQYMDVIGKLKHPNVV 415
+GKG G V+K ++ D +VA+K L + +EF++ + ++ L HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSL-HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
KL Y +V +++P G L H LL P+ W+ ++ L+L A G+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQ 139
Query: 475 QEYGTAKVPHGNVKSSNVLL---DKNGVAC--ISDFGLSLLLNPVQAIARLGG---YKAP 526
+ + H +++S N+ L D+N C ++DFGLS V +++ L G + AP
Sbjct: 140 NQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAP 195
Query: 527 EQ--AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPS-------------PTRPRVDEEE 571
E AE + ++KAD YSF ++L +LTG P S RP + E
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE-- 253
Query: 572 QAVDLPKWVRSVVKEEWTAE 591
D P +R+V++ W+ +
Sbjct: 254 ---DCPPRLRNVIELCWSGD 270
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 22/230 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
E++G G G V + L G VA+K LK R+EF ++G+ +HPN+++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L +++ +++ NG+L S L N G T I LV G RG+A +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-------FTVIQLV-GMLRGIASGMRY 131
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA----IARLGG-----YKAPE 527
H ++ + N+L++ N V +SDFGLS L + + LGG + APE
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
++ + +D +S+G+++ EV++ + + ++ EQ LP
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP 241
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
+++G G G V L G VA+K LK R++F ++G+ HPNV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L +++ +++ NGSL S L N G T I LV G RG+A +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVIQLV-GMLRGIAAGMKY 124
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL-----NPVQAIARLGG-----YKAP 526
H + + N+L++ N V +SDFGLS L +P A LGG + AP
Sbjct: 125 LADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA-LGGKIPIRWTAP 183
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
E + ++ + +DV+S+G+++ EV++ + + ++ EQ LP
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 234
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 7 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 64
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H N+ + N+L++ I DFGL+ +L + ++
Sbjct: 125 ------CKGMEYL----GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 221
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 383 VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L ++V +Y+ NGSL +
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + G I ++G RG+ + H ++ + NVL+D N V
Sbjct: 140 FLRTHDG--------QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCK 191
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGR 554
+SDFGLS +L +P A GG + APE + S +DV+SFGV++ EVL
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251
Query: 555 APSQYPSPTRPRVDEEEQAVDLP 577
+ R + E+ LP
Sbjct: 252 ERPYWNMTNRDVISSVEEGYRLP 274
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 383 VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L ++V +Y+ NGSL +
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + G I ++G RG+ + H ++ + NVL+D N V
Sbjct: 140 FLRTHDG--------QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCK 191
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGR 554
+SDFGLS +L +P A GG + APE + S +DV+SFGV++ EVL
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251
Query: 555 APSQYPSPTRPRVDEEEQAVDLP 577
+ R + E+ LP
Sbjct: 252 ERPYWNMTNRDVISSVEEGYRLP 274
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 6 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 124 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V+ ++ VAVK LK + E+ +++ L+H +V+L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEE-ANLMKTLQHDKLVRLYAVVTR 79
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+E ++ +Y+ GSL L + G G++ L I A G+A I ++
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK----NYI 132
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H +++++NVL+ ++ + I+DFGL+ ++ + AR G + APE + K+
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 539 DVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEE-EQAVDLPKWVRSVVKEEWTAEVFDQE 596
DV+SFG+LL E++T G+ P YP T V Q +P
Sbjct: 193 DVWSFGILLYEIVTYGKIP--YPGRTNADVMTALSQGYRMP------------------- 231
Query: 597 LLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R +N +EL ++ + C + E+RPT + +++D
Sbjct: 232 --RVENCPDELYDIMKM---CWKEKAEERPTFDYLQSVLDDF 268
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 26/232 (11%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEF 399
+E + + E+ + LGKG+ G+V Y + D+ G +VAVK+L+ + ++F
Sbjct: 2 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 400 EQYMDVIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLD 455
E+ ++++ L+H N+VK + Y+ + L+ +YLP GSL L H R L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ 121
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
+T++I +G+ + GT + H ++ + N+L++ I DFGL+ +L +
Sbjct: 122 YTSQI------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 516 AIARLGG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
++ + APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 52/294 (17%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCAR-------KEFEQYMDVIGKLKHPNVV 415
+GKG G V+K ++ D +VA+K L + +EF++ + ++ L HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSL-HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
KL Y +V +++P G L H LL P+ W+ ++ L+L A G+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQ 139
Query: 475 QEYGTAKVPHGNVKSSNVLL---DKNGVAC--ISDFGLSLLLNPVQAIARLGG---YKAP 526
+ + H +++S N+ L D+N C ++DFG S V +++ L G + AP
Sbjct: 140 NQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAP 195
Query: 527 EQ--AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
E AE + ++KAD YSF ++L +LTG P +E + K++ +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPF------------DEYSYGKIKFINMIR 243
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+E + + R +N+ E C P+KRP + + K + ++
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 9 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 127 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 11 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 68
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 129 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 179 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 225
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 26/232 (11%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEF 399
+E + + E+ + LGKG+ G+V Y + D+ G +VAVK+L+ + ++F
Sbjct: 30 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 400 EQYMDVIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLD 455
E+ ++++ L+H N+VK + Y+ + L+ +YLP GSL L H R L
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
+T++I +G+ + GT + H ++ + N+L++ I DFGL+ +L +
Sbjct: 150 YTSQI------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199
Query: 516 AIARLGG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
++ + APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 200 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 10 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 67
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 128 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 178 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 5 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 62
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 123 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 4 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 61
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 122 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 172 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 26/232 (11%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEF 399
+E + + E+ + LGKG+ G+V Y + D+ G +VAVK+L+ + ++F
Sbjct: 6 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 400 EQYMDVIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLD 455
E+ ++++ L+H N+VK + Y+ + L+ +YLP GSL L H R L
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 125
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
+T++I +G+ + GT + H ++ + N+L++ I DFGL+ +L +
Sbjct: 126 YTSQI------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 175
Query: 516 AIARLGG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
++ + APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 176 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 48/260 (18%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCAR-------KEFEQYMDVIGKLKHPNVV 415
+GKG G V+K ++ D +VA+K L + +EF++ + ++ L HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSL-HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
KL Y +V +++P G L H LL P+ W+ ++ L+L A G+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQ 139
Query: 475 QEYGTAKVPHGNVKSSNVLL---DKNGVAC--ISDFGLSLLLNPVQAIARLGG---YKAP 526
+ + H +++S N+ L D+N C ++DF LS V +++ L G + AP
Sbjct: 140 NQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAP 195
Query: 527 EQ--AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPS-------------PTRPRVDEEE 571
E AE + ++KAD YSF ++L +LTG P S RP + E
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE-- 253
Query: 572 QAVDLPKWVRSVVKEEWTAE 591
D P +R+V++ W+ +
Sbjct: 254 ---DCPPRLRNVIELCWSGD 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 6 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 124 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 6 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 124 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 12 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 69
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 130 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 180 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 226
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 24 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 81
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 142 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 192 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 350 QFELEDLLRASAEMLGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMD 404
QFE L + LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++
Sbjct: 24 QFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 81
Query: 405 VIGKLKHPNVVKLRAYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRI 460
++ L+H N+VK + Y+ + L+ +YLP GSL L H R L +T++I
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
+G+ + GT + H ++ + N+L++ I DFGL+ +L + ++
Sbjct: 142 ------CKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 521 GG-------YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ APE + S +DV+SFGV+L E+ T S+ P
Sbjct: 192 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
+++G G G V L G VA+K LK R++F ++G+ HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L + +++ +Y+ NGSL + L N G T I LV G RG+ +
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-------FTVIQLV-GMLRGIGSGMKY 146
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL--NPVQAIARLGG-----YKAPEQA 529
H ++ + N+L++ N V +SDFG+S +L +P A GG + APE
Sbjct: 147 LSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 530 EVKRLSQKADVYSFGVLLLEVLT 552
++ + +DV+S+G+++ EV++
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
+++G G G V L G VA+K LK R++F ++G+ HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L + +++ +Y+ NGSL + L N G T I LV G RG+ +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-------FTVIQLV-GMLRGIGSGMKY 131
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL--NPVQAIARLGG-----YKAPEQA 529
H ++ + N+L++ N V +SDFG+S +L +P A GG + APE
Sbjct: 132 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 530 EVKRLSQKADVYSFGVLLLEVLT 552
++ + +DV+S+G+++ EV++
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVK 416
+++G G G V L G VA+K LK R++F ++G+ HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L + +++ +Y+ NGSL + L N G T I LV G RG+ +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-------FTVIQLV-GMLRGIGSGMKY 125
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL--NPVQAIARLGG-----YKAPEQA 529
H ++ + N+L++ N V +SDFG+S +L +P A GG + APE
Sbjct: 126 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 530 EVKRLSQKADVYSFGVLLLEVLT 552
++ + +DV+S+G+++ EV++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 363 MLGKGSLGTVYKAVLDDGGI----VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
++G G G V L G VA+K LK R++F ++G+ HPN++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ ++V +Y+ NGSL + L N G T I LV G RG++ +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-------FTVIQLV-GMLRGISAGMKYL 140
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL--NPVQAIARLGG-----YKAPEQAE 530
H ++ + N+L++ N V +SDFGLS +L +P A GG + APE
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 531 VKRLSQKADVYSFGVLLLEVLT 552
++ + +DV+S+G+++ EV++
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVS 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 364 LGKGSLGTV----YKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG+ G+V Y + D+ G +VAVK+L+ + ++FE+ ++++ L+H N+VK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 419 AYYYA--KEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
Y+ + L+ ++LP GSL L H R L +T++I +G+ +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 133
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKAPE 527
GT + H ++ + N+L++ I DFGL+ +L + ++ + APE
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ S +DV+SFGV+L E+ T S+ P
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 362 EMLGKGSLGTVYKAVL----DDGGIVAVKRLKDANPCA--RKEFEQYMDVIGKLKHPNVV 415
+ +G+GS G KA+L +DG +K + + + R+E + + V+ +KHPN+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRG----PGRIPLDWTTRISLVLGAARGLA 471
+ R + +V DY G L ++ +G +I LDW +I L L
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQICL------ALK 139
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR--LGG--YKAPE 527
+H K+ H ++KS N+ L K+G + DFG++ +LN +AR +G Y +PE
Sbjct: 140 HVHDR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
E K + K+D+++ G +L E+ T
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 49/286 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V+ ++ VAVK LK + E+ +++ L+H +V+L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEE-ANLMKTLQHDKLVRLYAVVTK 78
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPL----DWTTRISLVLGAARGLARIHQEYGT 479
+E ++ +++ GSL L + G G++ L D++ +I A G+A I ++
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQI------AEGMAYIERK--- 128
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRL 534
H +++++NVL+ ++ + I+DFGL+ ++ + AR G + APE
Sbjct: 129 -NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 535 SQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEE-EQAVDLPKWVRSVVKEEWTAEV 592
+ K++V+SFG+LL E++T G+ P YP T V Q +P
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKIP--YPGRTNADVMSALSQGYRMP--------------- 230
Query: 593 FDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R +N +EL ++ + C + E+RPT + +++D
Sbjct: 231 ------RMENCPDELYDIMKM---CWKEKAEERPTFDYLQSVLDDF 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
+G G G V+ + VA+K +++ + ++F + +V+ KL HP +V+L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ LV++++ +G L L RG T + + L G+A + + A V
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEE----ASVI 125
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+ +N V +SDFG++ + Q + G + +PE R S K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
DV+SFGVL+ EV + G+ P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 42/235 (17%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF--EQYMDVIGKLKHPNVVKL-- 417
E++G+G G VYK LD+ VAVK AN R+ F E+ + + ++H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLDERP-VAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 418 ---RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
R + E LLV +Y PNGSL L + DW + L RGLA +H
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLH 128
Query: 475 QE-----YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL------LLNPVQ----AIAR 519
E + + H ++ S NVL+ +G ISDFGLS+ L+ P + AI+
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 520 LGG--YKAPEQAE-------VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRP 565
+G Y APE E + ++ D+Y+ G++ E+ R +P + P
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM-RCTDLFPGESVP 242
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
+++G G G VYK +L VA+K LK R +F ++G+ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+L + +++ +Y+ NG+L L G + + LV G RG+A +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-------LQLV-GMLRGIAAGMK 161
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL--NPVQAIARLGG-----YKAPEQ 528
H ++ + N+L++ N V +SDFGLS +L +P GG + APE
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 529 AEVKRLSQKADVYSFGVLLLEVLT 552
++ + +DV+SFG+++ EV+T
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
+G G G V+ + VA+K +K+ + + +F + +V+ KL HP +V+L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ LV++++ +G L L RG T + + L G+A + + A V
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEE----ACVI 145
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+ +N V +SDFG++ + Q + G + +PE R S K+
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
DV+SFGVL+ EV + G+ P +
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYE 226
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 124 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 175
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 176 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 107 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 158
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
+G G G V+ + VA+K +++ + ++F + +V+ KL HP +V+L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ LV++++ +G L L RG T + + L G+A + + A V
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEE----ACVI 123
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+ +N V +SDFG++ + Q + G + +PE R S K+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
DV+SFGVL+ EV + G+ P +
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
+G G G V+ + VA+K +++ + ++F + +V+ KL HP +V+L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ LV++++ +G L L RG T + + L G+A + + A V
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEE----ACVI 125
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+ +N V +SDFG++ + Q + G + +PE R S K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
DV+SFGVL+ EV + G+ P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
+G G G V+ + VA+K +++ + ++F + +V+ KL HP +V+L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ LV++++ +G L L RG T + + L G+A + + A V
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE----ACVI 128
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+ +N V +SDFG++ + Q + G + +PE R S K+
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
DV+SFGVL+ EV + G+ P +
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYE 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
E++G+G+ G V KA VA+K+++ + RK F + + ++ HPN+VKL Y
Sbjct: 15 EVVGRGAFGVVCKAKWRAKD-VAIKQIESES--ERKAFIVELRQLSRVNHPNIVKL--YG 69
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTR---ISLVLGAARGLARIHQEYG 478
LV +Y GSL+++LHG PL + T +S L ++G+A +H
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 479 TAKVPHGNVKSSNVLLDKNG-VACISDFGLSLLLNPVQAIAR-LGGYKAPEQAEVKRLSQ 536
A + H ++K N+LL G V I DFG + + + + APE E S+
Sbjct: 125 KALI-HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 537 KADVYSFGVLLLEVLTGRAP 556
K DV+S+G++L EV+T R P
Sbjct: 184 KCDVFSWGIILWEVITRRKP 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYM 403
+++K EL+D LG G+ G V+K G+V ++L + P R + + +
Sbjct: 58 QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 117
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
V+ + P +V +Y+ E + +++ GSL +L + GRIP ++S+
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA 174
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
+ +GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G
Sbjct: 175 V--IKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 229
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y +PE+ + S ++D++S G+ L+E+ GR P
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
E++G+G+ G V KA VA+K+++ + RK F + + ++ HPN+VKL Y
Sbjct: 14 EVVGRGAFGVVCKAKWRAKD-VAIKQIESES--ERKAFIVELRQLSRVNHPNIVKL--YG 68
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTR---ISLVLGAARGLARIHQEYG 478
LV +Y GSL+++LHG PL + T +S L ++G+A +H
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 479 TAKVPHGNVKSSNVLLDKNG-VACISDFGLSLLLNPVQAIAR-LGGYKAPEQAEVKRLSQ 536
A + H ++K N+LL G V I DFG + + + + APE E S+
Sbjct: 124 KALI-HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 537 KADVYSFGVLLLEVLTGRAP 556
K DV+S+G++L EV+T R P
Sbjct: 183 KCDVFSWGIILWEVITRRKP 202
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 22/212 (10%)
Query: 364 LGKGSLGTV----YKAVLDD-GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG+ G+V Y + D+ G +VAVK+L+ + P +++F++ + ++ L +VK R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 419 AYYY--AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
Y + E LV +YLP+G L L +R S +L + + + +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--------RLDASRLLLYSSQICKGMEY 126
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL--LNPVQAIARLGG-----YKAPEQA 529
G+ + H ++ + N+L++ I+DFGL+ L L+ + R G + APE
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPS 561
S+++DV+SFGV+L E+ T S PS
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 218
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 134 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 185
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYM 403
+++K EL+D LG G+ G V+K G+V ++L + P R + + +
Sbjct: 23 QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 82
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
V+ + P +V +Y+ E + +++ GSL +L + GRIP ++S+
Sbjct: 83 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA 139
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
+ +GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G
Sbjct: 140 V--IKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y +PE+ + S ++D++S G+ L+E+ GR P
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 22/225 (9%)
Query: 364 LGKGSLGTV----YKAVLDD-GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG+ G+V Y + D+ G +VAVK+L+ + P +++F++ + ++ L +VK R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 419 AYYY--AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
Y ++ LV +YLP+G L L +R LD + + +G+ +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 130
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL--LNPVQAIARLGG-----YKAPEQA 529
G+ + H ++ + N+L++ I+DFGL+ L L+ + R G + APE
Sbjct: 131 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAV 574
S+++DV+SFGV+L E+ T S PS R+ E+ V
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDV 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYM 403
+++K EL+D LG G+ G V+K G+V ++L + P R + + +
Sbjct: 15 QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 74
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
V+ + P +V +Y+ E + +++ GSL +L + GRIP ++S+
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA 131
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
+ +GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G
Sbjct: 132 V--IKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 186
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y +PE+ + S ++D++S G+ L+E+ GR P
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGL+ +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 19/237 (8%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYM 403
++ K EL+D LG G+ G V K G++ ++L + P R + + +
Sbjct: 6 QKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIREL 65
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
V+ + P +V +Y+ E + +++ GSL +L + RIP + ++S+
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIA 122
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
+ RGLA + +++ ++ H +VK SN+L++ G + DFG+S L A + +G
Sbjct: 123 V--LRGLAYLREKH---QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 177
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPT-------RPRVDEEE 571
Y APE+ + S ++D++S G+ L+E+ GR P P RP VD EE
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEE 234
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 364 LGKGSLGTV----YKAVLDD-GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG+ G+V Y + D+ G +VAVK+L+ + P +++F++ + ++ L +VK R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 419 AYYY--AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
Y ++ LV +YLP+G L L +R LD + + +G+ +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 143
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL--LNPVQAIARLGG-----YKAPEQA 529
G+ + H ++ + N+L++ I+DFGL+ L L+ + R G + APE
Sbjct: 144 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPS 561
S+++DV+SFGV+L E+ T S PS
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTV----YKAVLDD-GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG+ G+V Y + D+ G +VAVK+L+ + P +++F++ + ++ L +VK R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 419 AYYY--AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
Y ++ LV +YLP+G L L +R LD + + +G+ +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYL--- 131
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL--LNPVQAIARLGG-----YKAPEQA 529
G+ + H ++ + N+L++ I+DFGL+ L L+ + R G + APE
Sbjct: 132 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 530 EVKRLSQKADVYSFGVLLLEVLT 552
S+++DV+SFGV+L E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V +Y+ NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGL +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGK 408
EL+D LG G+ G V+K G+V ++L + P R + + + V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
P +V +Y+ E + +++ GSL +L + GRIP ++S+ + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAP 526
GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G Y +P
Sbjct: 116 GLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E+ + S ++D++S G+ L+E+ GR P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
+G G G V+ + VA+K +++ + ++F + +V+ KL HP +V+L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ LV +++ +G L L RG T + + L G+A + + A V
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE----ACVI 126
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+ +N V +SDFG++ + Q + G + +PE R S K+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
DV+SFGVL+ EV + G+ P +
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYE 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGK 408
EL+D LG G+ G V+K G+V ++L + P R + + + V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
P +V +Y+ E + +++ GSL +L + GRIP ++S+ + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAP 526
GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G Y +P
Sbjct: 116 GLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E+ + S ++D++S G+ L+E+ GR P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G+ G V+ A D +VAVK LKDA+ ARK+F + +++ L+H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGP-------GRIPLDWTTRISLVLGAARGL 470
+ ++V++Y+ +G L+ L + GP G P + T S +L A+ +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAH-GPDAVLMAEGNPPTELTQ--SQMLHIAQQI 137
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKA----- 525
A + H ++ + N L+ +N + I DFG+S + R+GG+
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD-YYRVGGHTMLPIRW 196
Query: 526 --PEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
PE ++ + ++DV+S GV+L E+ T G+ P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGK 408
EL+D LG G+ G V+K G+V ++L + P R + + + V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
P +V +Y+ E + +++ GSL +L + GRIP ++S+ + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAP 526
GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G Y +P
Sbjct: 116 GLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E+ + S ++D++S G+ L+E+ GR P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G+ G V+ A D +VAVK LKD ARK+F++ +++ L+H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTR-------ISLVLGAARGL 470
+ ++V++Y+ +G L+ L + I +D R +S +L A +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKA----- 525
A + H ++ + N L+ N + I DFG+S + R+GG+
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD-YYRVGGHTMLPIRW 201
Query: 526 --PEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
PE ++ + ++DV+SFGV+L E+ T G+ P
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGK 408
EL+D LG G+ G V+K G+V ++L + P R + + + V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
P +V +Y+ E + +++ GSL +L + GRIP ++S+ + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAP 526
GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G Y +P
Sbjct: 116 GLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E+ + S ++D++S G+ L+E+ GR P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGK 408
EL+D LG G+ G V+K G+V ++L + P R + + + V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
P +V +Y+ E + +++ GSL +L + GRIP ++S+ + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IK 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAP 526
GL + +++ K+ H +VK SN+L++ G + DFG+S L A + +G Y +P
Sbjct: 116 GLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E+ + S ++D++S G+ L+E+ GR P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 311
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 312 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 368
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H N+ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 369 AMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 469
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 470 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 519
Query: 643 S 643
S
Sbjct: 520 S 520
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 269
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 270 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 326
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H N+ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 327 AMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 427
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 428 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 477
Query: 643 S 643
S
Sbjct: 478 S 478
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 363 MLGKGSLGTVYKAVLDDGG----IVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
++G G G V L G VA+K LK R++F ++G+ HPNVV L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ ++V +++ NG+L + L + G T I LV G RG+A +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-------FTVIQLV-GMLRGIAAGMRYL 161
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL--NPVQAIARLGG-----YKAPEQAE 530
H ++ + N+L++ N V +SDFGLS ++ +P GG + APE +
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 531 VKRLSQKADVYSFGVLLLEVLT 552
++ + +DV+S+G+++ EV++
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 383 VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V + + NGSL S
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 107 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 158
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 383 VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V + + NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 272
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R + + + +
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 329
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H N+ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 330 AMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 430
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 431 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 480
Query: 643 S 643
S
Sbjct: 481 S 481
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 352 ELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGKL 409
EL+D LG G+ G V+K G+V ++L + P R + + + V+ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
P +V +Y+ E + +++ GSL +L + GRIP ++S+ + +G
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKG 119
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAPE 527
L + +++ K+ H +VK SN+L++ G + DFG+S L A +G Y +PE
Sbjct: 120 LTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPE 176
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ + S ++D++S G+ L+E+ GR P
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS 441
VA+K LK R++F ++G+ HPN+++L + ++V + + NGSL S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 442 LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC 501
L + T I LV G RG+A + H ++ + N+L++ N V
Sbjct: 136 FLRKHDAQ-------FTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 502 ISDFGLSLLL--NPVQAIARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+SDFGLS +L +P A GG + +PE ++ + +DV+S+G++L EV++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E++G G+ V A VA+KR+ + + E + + + + HPN+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 420 YYYAKEEKLLVYDYLPNGSL-----HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ K+E LV L GS+ H + G G LD +T +++ GL +H
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG--VLDESTIATILREVLEGLEYLH 133
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR-------LGG--YKA 525
+ H +VK+ N+LL ++G I+DFG+S L I R +G + A
Sbjct: 134 KNGQI----HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 526 PEQAE-VKRLSQKADVYSFGVLLLEVLTGRAP-SQYPSPTRPRVDEEEQAVDLPKWVRSV 583
PE E V+ KAD++SFG+ +E+ TG AP +YP + + L V+
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-- 247
Query: 584 VKEEWTAEVFDQELL-RYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
D+E+L +Y +++S+ C+ PEKRPT AE+ +
Sbjct: 248 ----------DKEMLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E++G G+ V A VA+KR+ + + E + + + + HPN+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 420 YYYAKEEKLLVYDYLPNGSL-----HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ K+E LV L GS+ H + G G LD +T +++ GL +H
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG--VLDESTIATILREVLEGLEYLH 138
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR-------LGG--YKA 525
+ H +VK+ N+LL ++G I+DFG+S L I R +G + A
Sbjct: 139 KNGQI----HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 526 PEQAE-VKRLSQKADVYSFGVLLLEVLTGRAP-SQYPSPTRPRVDEEEQAVDLPKWVRSV 583
PE E V+ KAD++SFG+ +E+ TG AP +YP + + L V+
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-- 252
Query: 584 VKEEWTAEVFDQELL-RYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
D+E+L +Y +++S+ C+ PEKRPT AE+ +
Sbjct: 253 ----------DKEMLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 59/325 (18%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKL 409
F DL+ E+LGKG G K + G ++ +K L + ++ F + + V+ L
Sbjct: 7 FRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL 64
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+HPNV+K Y + + +Y+ G+L ++ + P W+ R+S A G
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM--DSQYP--WSQRVSFAKDIASG 120
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL----------LNPVQAIAR 519
+A +H + + H ++ S N L+ +N ++DFGL+ L L ++ R
Sbjct: 121 MAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 520 LGGYK--------APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEE 571
Y APE + +K DV+SFG++L E++ GR + D
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD--------PDYLP 227
Query: 572 QAVDLPKWVRSVVKEEWTAEVFDQELLRY--KNIEEELVSMLHVGLACVVSQPEKRPTMA 629
+ +D VR L RY N S + + C PEKRP+
Sbjct: 228 RTMDFGLNVRGF-------------LDRYCPPNCPP---SFFPITVRCCDLDPEKRPSFV 271
Query: 630 EVAKMIEDIRVEQS---PLGEEYDE 651
++ +E +R+ + PLG + ++
Sbjct: 272 KLEHWLETLRMHLAGHLPLGPQLEQ 296
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A + I+A+K L A + + +
Sbjct: 2 KRQWALEDF--EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYI 114
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L+ H + KV H ++K N+LL G I+DFG S+ + A G
Sbjct: 115 TELANALSYCH----SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 64
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + + I + AR
Sbjct: 65 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTAR 119
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 120 GMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 42/304 (13%)
Query: 343 VFYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQ 401
++++ ++E+E LG G G VY V + VAVK LK+ + +EF +
Sbjct: 19 LYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLK 77
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRI 460
V+ ++KHPN+V+L + +V +Y+P G+L L NR T +
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE-------VTAV 130
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL 520
L+ A + ++ + H ++ + N L+ +N V ++DFGLS L+ A
Sbjct: 131 VLLYMATQ-ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
Query: 521 GG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAV 574
G + APE S K+DV++FGVLL E+ T G +P P +D +
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP-------YPGIDLSQVYD 242
Query: 575 DLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKM 634
L K R E +V+ EL+R AC P RP+ AE +
Sbjct: 243 LLEKGYRMEQPEGCPPKVY--ELMR----------------ACWKWSPADRPSFAETHQA 284
Query: 635 IEDI 638
E +
Sbjct: 285 FETM 288
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 27 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 139
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 140 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 195
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 6 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G ++ L D +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-----KFDEQRTATY 118
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 119 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 362 EMLGKGSLGTVY--KAVL--DDGGIVAVKRLKDANPCARKEFEQYM--DVIGKLKHPNVV 415
++LG+GS G V+ + V D G + A+K LK A R M D++ + HP VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 416 KLRAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA-ARGLARI 473
KL Y + E KL L+ D+L G L + L + + + L A GL +
Sbjct: 94 KLH-YAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALGLDHL 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGG--YKAPEQA 529
H + + + ++K N+LLD+ G ++DFGLS + + +A + G Y APE
Sbjct: 147 H----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
+ S AD +S+GVL+ E+LTG P Q
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 66
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 123
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 124 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 224
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 225 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 274
Query: 643 S 643
S
Sbjct: 275 S 275
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 6 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G ++ L D +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-----KFDEQRTATY 118
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 119 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXG 173
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 18 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 130
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 131 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 186
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 70
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 128 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 228
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 229 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
Query: 643 S 643
S
Sbjct: 279 S 279
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 6 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 118
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 119 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 76
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + + I + AR
Sbjct: 77 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTAR 131
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL---LLNPVQAIARLGG--- 522
G+ +H + H ++KS+N+ L ++ I DFGL+ + +L G
Sbjct: 132 GMDYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 67
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 124
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 125 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 225
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 226 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 643 S 643
S
Sbjct: 276 S 276
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 4 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 116
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 117 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 67
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 124
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 125 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 225
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 226 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 643 S 643
S
Sbjct: 276 S 276
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 63
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAA 467
+KHPN+V+L + ++ +++ G+L L NR ++L A
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMA 115
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG----- 522
++ + H ++ + N L+ +N + ++DFGLS L+ A G
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
+ APE + S K+DV++FGVLL E+ T Y P +D P V
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYPGID--------PSQVYE 221
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 222 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 271
Query: 643 S 643
S
Sbjct: 272 S 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 78
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 79 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 135
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 136 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 191
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 236
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 237 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 286
Query: 643 S 643
S
Sbjct: 287 S 287
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L A + + +
Sbjct: 2 KRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYI 114
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A L+ H + +V H ++K N+LL G I+DFG S + P A L G
Sbjct: 115 TELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGT 169
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 70
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R + + + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 127
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 128 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 228
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 229 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
Query: 643 S 643
S
Sbjct: 279 S 279
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 6 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 118
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 119 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 63
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAA 467
+KHPN+V+L + ++ +++ G+L L NR ++L A
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ--------EVSAVVLLYMA 115
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG----- 522
++ + H ++ + N L+ +N + ++DFGLS L+ A G
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVR 581
+ APE + S K+DV++FGVLL E+ T G +P P +D P V
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP-------YPGID--------PSQVY 220
Query: 582 SVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 221 ELLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 270
Query: 642 QS 643
S
Sbjct: 271 SS 272
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 27 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 139
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S+ P L G
Sbjct: 140 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRDDLCG 194
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R + + + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 123 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 223
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 224 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
Query: 643 S 643
S
Sbjct: 274 S 274
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 2 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 114
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S P L G
Sbjct: 115 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSG 169
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R + + + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 123 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 223
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 224 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
Query: 643 S 643
S
Sbjct: 274 S 274
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 3 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 115
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 116 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCG 170
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R + + + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 123 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 223
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 224 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
Query: 643 S 643
S
Sbjct: 274 S 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R + + + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISS 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 123 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 223
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 224 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
Query: 643 S 643
S
Sbjct: 274 S 274
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 6 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 118
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 119 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCG 173
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 1 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 113
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 114 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCG 168
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 2 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 114
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 115 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCG 169
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 70
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 128 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 228
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 229 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 4 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 116
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 117 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDAN---PCARKEFEQYM 403
K++F ++D LGKG G VY A + I+A+K L + + + +
Sbjct: 8 KRKFTIDDF--DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN++++ Y++ ++ L+ ++ P G L+ L + GR D + +
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GR--FDEQRSATFM 120
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L H+ KV H ++K N+L+ G I+DFG S+ ++ G
Sbjct: 121 EELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 176
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPT 563
Y PE E K +K D++ GVL E L G P PS T
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 26/239 (10%)
Query: 362 EMLGKGSLGTVYKAVLDD--GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+ +GKG G V +L D G VAVK +K N + F V+ +L+H N+V+L
Sbjct: 199 QTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 420 YYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ L +V +Y+ GSL L R GR L + L + +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 308
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-GYKAPEQAEVKRLSQK 537
H ++ + NVL+ ++ VA +SDFGL+ + Q +L + APE K+ S K
Sbjct: 309 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPS-PTRPRVDEEEQAVDL------PKWVRSVVKEEW 588
+DV+SFG+LL E+ + GR P YP P + V E+ + P V V+K W
Sbjct: 367 SDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCW 423
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 70
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 128 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 228
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 229 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRY 80
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 139 H-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 70
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 127
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 128 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 228
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 229 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRY 80
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 139 H-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDAN---PCARKEFEQYM 403
K++F ++D LGKG G VY A + I+A+K L + + + +
Sbjct: 9 KRKFTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN++++ Y++ ++ L+ ++ P G L+ L + GR D + +
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GR--FDEQRSATFM 121
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L H+ KV H ++K N+L+ G I+DFG S+ ++ G
Sbjct: 122 EELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 177
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPT 563
Y PE E K +K D++ GVL E L G P PS T
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 219
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDAN---PCARKEFEQYM 403
K++F ++D LGKG G VY A + I+A+K L + + + +
Sbjct: 8 KRKFTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN++++ Y++ ++ L+ ++ P G L+ L + GR D + +
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GR--FDEQRSATFM 120
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L H+ KV H ++K N+L+ G I+DFG S+ ++ G
Sbjct: 121 EELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 176
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPT 563
Y PE E K +K D++ GVL E L G P PS T
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 76
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ Y A + +V + SL+ LH + + I + AR
Sbjct: 77 TRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTAR 131
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL---LLNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + +L G
Sbjct: 132 GMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 4 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 116
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 117 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCG 171
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 66
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 123
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 124 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 224
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 225 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 274
Query: 643 S 643
S
Sbjct: 275 S 275
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHP 412
+++ +++G GS G VY+A L D G +VA+K++ +E + ++ KL H
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 107
Query: 413 NVVKLRAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA 466
N+V+LR ++Y+ EK LV DY+P H +R +P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGG 522
R LA IH +G + H ++K N+LLD + V + DFG + L P +
Sbjct: 166 FRSLAYIH-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 523 YKAPEQA-EVKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE + DV+S G +L E+L G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 362 EMLGKGSLGTVYKAVLDD--GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+ +GKG G V +L D G VAVK +K N + F V+ +L+H N+V+L
Sbjct: 27 QTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 420 YYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ L +V +Y+ GSL L R GR L + L + +
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 136
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL-GGYKAPEQAEVKRLSQK 537
H ++ + NVL+ ++ VA +SDFGL+ + Q +L + APE K+ S K
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPS-PTR---PRVDE 569
+DV+SFG+LL E+ + GR P YP P + PRV++
Sbjct: 195 SDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEK 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L A + + +
Sbjct: 6 KRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 63
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATYI 118
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 119 TELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L A + + +
Sbjct: 2 KRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYI 114
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 115 TELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGT 169
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 67
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 124
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 125 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 225
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQ 642
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 226 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 643 S 643
S
Sbjct: 276 S 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 2 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 114
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG 522
+ A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 115 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCG 169
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 362 EMLGKGSLGTVYKAVLDD--GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+ +GKG G V +L D G VAVK +K N + F V+ +L+H N+V+L
Sbjct: 12 QTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 420 YYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ L +V +Y+ GSL L R GR L + L + +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 121
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL-GGYKAPEQAEVKRLSQK 537
H ++ + NVL+ ++ VA +SDFGL+ + Q +L + APE K+ S K
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPS-PTR---PRVDE 569
+DV+SFG+LL E+ + GR P YP P + PRV++
Sbjct: 180 SDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEK 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 69
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 126
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 127 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 227
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 228 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 276
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G +VAVK LK D P R ++Q +D++ L H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 418 RAYYYAKEEK--LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+ + EK LV +Y+P GSL L R + + G+A +H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKAPEQ 528
++ H N+ + NVLLD + + I DFGL+ + R+ + APE
Sbjct: 136 QHYI----HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
+ + +DV+SFGV L E+LT SQ P PT+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTK 226
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L A + + +
Sbjct: 1 KRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 58
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 59 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYI 113
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 114 TELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 169
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 114
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 172
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 173 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 228
Query: 530 -EVKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHP 412
+++ +++G GS G VY+A L D G +VA+K++ +E + ++ KL H
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 109
Query: 413 NVVKLRAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA 466
N+V+LR ++Y+ EK LV DY+P H +R +P+ + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 167
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGG 522
R LA IH +G + H ++K N+LLD + V + DFG + L P +
Sbjct: 168 FRSLAYIH-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 523 YKAPEQA-EVKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE + DV+S G +L E+L G+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G+ G V+ A D +VAVK LK+A+ AR++F++ +++ L+H ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL--HG----------NRGPGRIPLDWTTRISLVLG 465
L+V++Y+ +G L+ L HG + PG PL +++
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 143
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A G+ + H ++ + N L+ + V I DFG+S + R+GG
Sbjct: 144 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-YYRVGGRTM 198
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ PE ++ + ++DV+SFGV+L E+ T G+ P
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L A + + +
Sbjct: 2 KRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYI 114
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 115 TELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGT 169
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHP 412
+++ +++G GS G VY+A L D G +VA+K++ +E + ++ KL H
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 101
Query: 413 NVVKLRAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA 466
N+V+LR ++Y+ EK LV DY+P H +R +P+ + L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 159
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGG 522
R LA IH +G + H ++K N+LLD + V + DFG + L P +
Sbjct: 160 FRSLAYIH-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 523 YKAPEQAE-VKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE + DV+S G +L E+L G+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G +VAVK LK D P R ++Q +D++ L H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 418 RAYYYAKEEK--LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+ + EK LV +Y+P GSL L R + + G+A +H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKAPEQ 528
++ H N+ + NVLLD + + I DFGL+ + R+ + APE
Sbjct: 136 QHYI----HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
+ + +DV+SFGV L E+LT SQ P PT+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTK 226
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L A + + +
Sbjct: 2 KRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYI 114
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 115 TELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGT 169
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 123 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 223
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 224 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 63
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAA 467
+KHPN+V+L + ++ +++ G+L L NR ++L A
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMA 115
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG----- 522
++ + H ++ + N L+ +N + ++DFGLS L+ A G
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK 175
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVR 581
+ APE + S K+DV++FGVLL E+ T G +P P +D P V
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP-------YPGID--------PSQVY 220
Query: 582 SVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVE 641
++++++ E R + E++ ++ AC P RP+ AE+ + E + E
Sbjct: 221 ELLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 270
Query: 642 QS 643
S
Sbjct: 271 SS 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGK 408
++E+E LG G G VY+ V + VAVK LK+ + +EF + V+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+KHPN+V+L + ++ +++ G+L L R R ++ + + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISS 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----Y 523
+ + ++ H ++ + N L+ +N + ++DFGLS L+ A G +
Sbjct: 123 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE + S K+DV++FGVLL E+ T G +P YP +DL + V
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YP------------GIDLSQ-VYE 223
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
++++++ E R + E++ ++ AC P RP+ AE+ + E +
Sbjct: 224 LLEKDYRME-------RPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYMD 404
+Q+ LED LGKG G VY A I+A+K L A + + ++
Sbjct: 6 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATYIT 118
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--G 522
A L+ H + +V H ++K N+LL G I+DFG S+ + A G
Sbjct: 119 ELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLD 174
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G+ G V+ A D +VAVK LK+A+ AR++F++ +++ L+H ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL--HG----------NRGPGRIPLDWTTRISLVLG 465
L+V++Y+ +G L+ L HG + PG PL +++
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 166
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A G+ + H ++ + N L+ + V I DFG+S + R+GG
Sbjct: 167 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-YYRVGGRTM 221
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ PE ++ + ++DV+SFGV+L E+ T G+ P
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G+ G V+ A D +VAVK LK+A+ AR++F++ +++ L+H ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL--HG----------NRGPGRIPLDWTTRISLVLG 465
L+V++Y+ +G L+ L HG + PG PL +++
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 137
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A G+ + H ++ + N L+ + V I DFG+S + R+GG
Sbjct: 138 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-YYRVGGRTM 192
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ PE ++ + ++DV+SFGV+L E+ T G+ P
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRY 80
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 139 H-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNV 414
L E +GKGS G V+K + + V ++ D ++ +Q + V+ + P V
Sbjct: 28 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
K Y + ++ +YL GS LL PG PLD T +++ +GL +H
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH 141
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAE 530
E K H ++K++NVLL ++G ++DFG++ L Q + APE +
Sbjct: 142 SE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 197
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR---------PRVDEEEQAVDLPKWVR 581
KAD++S G+ +E+ G P P + P E + L ++V
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 257
Query: 582 SVVKEEWTAEVFDQELLRYKNI 603
+ + +E + +ELL++K I
Sbjct: 258 ACLNKEPSFRPTAKELLKHKFI 279
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 118
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 176
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 177 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 530 -EVKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 29/246 (11%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHP 412
+++ +++G GS G VY+A L D G +VA+K++ +E + ++ KL H
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 152
Query: 413 NVVKLRAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA 466
N+V+LR ++Y+ EK LV DY+P H +R +P+ + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 210
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGG 522
R LA IH +G + H ++K N+LLD + V + DFG + L P +
Sbjct: 211 FRSLAYIH-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 523 YKAPEQA-EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVR 581
Y+APE + DV+S G +L E+L G+ P P +Q V++ K +
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-------PIFPGDSGVDQLVEIIKVLG 319
Query: 582 SVVKEE 587
+ +E+
Sbjct: 320 TPTREQ 325
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 92
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 150
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 151 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 85
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 143
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 144 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 3 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 115
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I++FG S+ + G
Sbjct: 116 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 171
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V+ +G A+K LK K+ E D ++ + HP ++++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLH-GNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ ++ DY+ G L SLL R P + + + L L EY
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL-----------EYL 122
Query: 479 TAK-VPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ-AIARLGGYKAPEQAEVKRLSQ 536
+K + + ++K N+LLDKNG I+DFG + + V + Y APE K ++
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 537 KADVYSFGVLLLEVLTGRAP 556
D +SFG+L+ E+L G P
Sbjct: 183 SIDWWSFGILIYEMLAGYTP 202
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 359 ASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+L
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRL 78
Query: 418 RAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
R ++Y+ EK LV DY+P H +R +P+ + L R LA
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLA 136
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPE 527
IH +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 137 YIH-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 528 QAE-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 93
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 151
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 152 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 359 ASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+L
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRL 79
Query: 418 RAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
R ++Y+ EK LV DY+P H +R +P+ + L R LA
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLA 137
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPE 527
IH +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 138 YIH-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 193
Query: 528 QAE-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 99
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 157
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 158 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 213
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 92
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 150
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 151 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 361 AEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+LR
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRLRY 88
Query: 420 YYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++Y+ EK LV DY+P H +R +P+ + L R LA I
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPEQA 529
H +G + H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 147 H-SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 202
Query: 530 E-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 359 ASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+L
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRL 78
Query: 418 RAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
R ++Y+ EK LV DY+P H +R +P+ + L R LA
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLA 136
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPE 527
IH +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 137 YIH-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 528 QAE-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 359 ASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+L
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRL 78
Query: 418 RAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
R ++Y+ EK LV DY+P H +R +P+ + L R LA
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLA 136
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPE 527
IH +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 137 YIH-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 528 QAE-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 359 ASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+L
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRL 78
Query: 418 RAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
R ++Y+ EK LV DY+P H +R +P+ + L R LA
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLA 136
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPE 527
IH +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 137 YIH-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 528 QAE-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYMD 404
+Q+ LED LGKG G VY A I+A+K L A + + ++
Sbjct: 3 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYIT 115
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 116 ELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTL 170
Query: 523 -YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L + + +
Sbjct: 6 KRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREV 63
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-----FDEQRTATYI 118
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG-- 521
A L+ H + +V H ++K N+LL NG I+DFG S+ + G
Sbjct: 119 TELANALSYCH----SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 522 GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G P +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGG----IVAVKRLKDANPCARKEFEQYM-- 403
QFEL ++LG+GS G V+ G + A+K LK A R M
Sbjct: 25 QFEL-------LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLD-WTTRIS 461
D++ ++ HP +VKL Y + E KL L+ D+L G L + L + + ++
Sbjct: 78 DILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIAR 519
L L L I++ ++K N+LLD+ G ++DFGLS + + +A +
Sbjct: 137 LALDHLHSLGIIYR----------DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 520 LGG--YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
G Y APE + +Q AD +SFGVL+ E+LTG P Q
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 359 ASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+++G GS G VY+A L D G +VA+K++ +E + ++ KL H N+V+L
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIVRL 82
Query: 418 RAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
R ++Y+ EK LV DY+P H +R +P+ + L R LA
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLA 140
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKN-GVACISDFGLSLLL---NPVQAIARLGGYKAPE 527
IH +G H ++K N+LLD + V + DFG + L P + Y+APE
Sbjct: 141 YIH-SFGIC---HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 196
Query: 528 QAE-VKRLSQKADVYSFGVLLLEVLTGR 554
+ DV+S G +L E+L G+
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIG------KLKHPNVVK 416
+G GS G VY A + + +VA+K++ + ++ E++ D+I KL+HPN ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYS---GKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
R Y + LV +Y GS LL ++ P L ++ GA +GLA +H
Sbjct: 119 YRGCYLREHTAWLVMEYCL-GSASDLLEVHKKP----LQEVEIAAVTHGALQGLAYLH-- 171
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAPE---QAEVKR 533
+ + H +VK+ N+LL + G+ + DFG + ++ P + APE + +
Sbjct: 172 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 534 LSQKADVYSFGVLLLEVLTGRAP 556
K DV+S G+ +E+ + P
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNV 414
L E +GKGS G V+K + + V ++ D ++ +Q + V+ + P V
Sbjct: 8 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
K Y + ++ +YL GS LL PG PLD T +++ +GL +H
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH 121
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAE 530
E K H ++K++NVLL ++G ++DFG++ L Q + APE +
Sbjct: 122 SE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 177
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR---------PRVDEEEQAVDLPKWVR 581
KAD++S G+ +E+ G P P + P E + L ++V
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 582 SVVKEEWTAEVFDQELLRYKNI 603
+ + +E + +ELL++K I
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFI 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQY 402
+K+Q+ LED LGKG G VY A I+A+K L A + +
Sbjct: 4 KKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 403 MDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
+++ L+HPN+++L Y++ L+ +Y P G+++ L D +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 116
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG- 521
+ A L+ H + +V H ++K N+LL G I++FG S+ + G
Sbjct: 117 ITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 172
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYMD 404
+Q+ LED LGKG G VY A I+A+K L A + + ++
Sbjct: 3 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYIT 115
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--G 522
A L+ H + +V H ++K N+LL G I+DFG S+ + G
Sbjct: 116 ELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD 171
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y PE E + +K D++S GVL E L G+ P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNV 414
L E +GKGS G V+K + + V ++ D ++ +Q + V+ + P V
Sbjct: 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
K Y + ++ +YL GS LL PG PLD T +++ +GL +H
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH 136
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAE 530
E K H ++K++NVLL ++G ++DFG++ L Q + APE +
Sbjct: 137 SE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR---------PRVDEEEQAVDLPKWVR 581
KAD++S G+ +E+ G P P + P E + L ++V
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 252
Query: 582 SVVKEEWTAEVFDQELLRYKNI 603
+ + +E + +ELL++K I
Sbjct: 253 ACLNKEPSFRPTAKELLKHKFI 274
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGG----IVAVKRLKDANPCARKEFEQYM-- 403
QFEL ++LG+GS G V+ G + A+K LK A R M
Sbjct: 26 QFEL-------LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 78
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLD-WTTRIS 461
D++ ++ HP +VKL Y + E KL L+ D+L G L + L + + ++
Sbjct: 79 DILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 137
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIAR 519
L L L I++ ++K N+LLD+ G ++DFGLS + + +A +
Sbjct: 138 LALDHLHSLGIIYR----------DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 520 LGG--YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
G Y APE + +Q AD +SFGVL+ E+LTG P Q
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 40/282 (14%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VAVK +K+ + + EF Q + KL HP +VK
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ +V +Y+ NG L + L + G G P + + + G+A + + +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSH-GKGLEP---SQLLEMCYDVCEGMAFLE----SHQFI 126
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L+D++ +SDFG++ + Q ++ +G + APE + S K+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 539 DVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQEL 597
DV++FG+L+ EV + G+ P Y T V V+K ++ L
Sbjct: 187 DVWAFGILMWEVFSLGKMP--YDLYTNSEV---------------VLKVSQGHRLYRPHL 229
Query: 598 LRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIR 639
++ + +C PEKRPT ++ IE +R
Sbjct: 230 AS--------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGG----IVAVKRLKDANPCARKEFEQYM-- 403
QFEL ++LG+GS G V+ G + A+K LK A R M
Sbjct: 25 QFEL-------LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLD-WTTRIS 461
D++ ++ HP +VKL Y + E KL L+ D+L G L + L + + ++
Sbjct: 78 DILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIAR 519
L L L I++ ++K N+LLD+ G ++DFGLS + + +A +
Sbjct: 137 LALDHLHSLGIIYR----------DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 520 LGG--YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
G Y APE + +Q AD +SFGVL+ E+LTG P Q
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E +G+G+ GTVY A+ + G VA++++ ++ + V+ + K+PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
Y +E +V +YL GSL ++ +D ++ + L +H +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 136
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA----IARLGGYKAPEQAEVKRLSQ 536
+V H N+KS N+LL +G ++DFG + P Q+ + + APE K
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
K D++S G++ +E++ G P +P R
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIG------KLKHPNVVK 416
+G GS G VY A + + +VA+K++ + ++ E++ D+I KL+HPN ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKM---SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
R Y + LV +Y GS LL ++ P L ++ GA +GLA +H
Sbjct: 80 YRGCYLREHTAWLVMEYCL-GSASDLLEVHKKP----LQEVEIAAVTHGALQGLAYLH-- 132
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAPE---QAEVKR 533
+ + H +VK+ N+LL + G+ + DFG + ++ P + APE + +
Sbjct: 133 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 534 LSQKADVYSFGVLLLEVLTGRAP 556
K DV+S G+ +E+ + P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNV 414
L E +GKGS G V+K + + V ++ D ++ +Q + V+ + P V
Sbjct: 8 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
K Y + ++ +YL GS LL PG PLD T +++ +GL +H
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PG--PLDETQIATILREILKGLDYLH 121
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAE 530
E K H ++K++NVLL ++G ++DFG++ L Q + APE +
Sbjct: 122 SE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 177
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR---------PRVDEEEQAVDLPKWVR 581
KAD++S G+ +E+ G P P + P E + L ++V
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 582 SVVKEEWTAEVFDQELLRYKNI 603
+ + +E + +ELL++K I
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFI 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDAN---PCARKEFEQYM 403
K+Q+ LED LGKG G VY A I+A+K L + + +
Sbjct: 6 KRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREV 63
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
++ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-----FDEQRTATYI 118
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A L+ H + +V H ++K N+LL NG I+DFG S + P L G
Sbjct: 119 TELANALSYCH----SKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGT 173
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G P +
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 52/307 (16%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+G G V KA VAVK LK+ A+P ++ +V+ ++ HP+V+K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--GPGRI---------PLDWTTRISLVLG 465
L LL+ +Y GSL L +R GPG + LD +L +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 466 ----AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL-LLNPVQAIARL 520
A +++ Q K+ H ++ + N+L+ + ISDFGLS + + R
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 521 GG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
G + A E + ++DV+SFGVLL E++T P P P
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---LGGNPYPGIP---------- 257
Query: 576 LPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMI 635
P+ + +++K + R N EE+ ++ L C +P+KRP A+++K +
Sbjct: 258 -PERLFNLLKT-------GHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 636 EDIRVEQ 642
E + V++
Sbjct: 307 EKMMVKR 313
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 52/307 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+G G V KA VAVK LK+ A+P ++ +V+ ++ HP+V+K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--GPGRI---------PLDWTTRISLVLG 465
L LL+ +Y GSL L +R GPG + LD +L +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 466 ----AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL-LLNPVQAIARL 520
A +++ Q K+ H ++ + N+L+ + ISDFGLS + + R
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 521 GG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
G + A E + ++DV+SFGVLL E++T P P P
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---LGGNPYPGIP---------- 257
Query: 576 LPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMI 635
P+ + +++K + R N EE+ ++ L C +P+KRP A+++K +
Sbjct: 258 -PERLFNLLKT-------GHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 636 EDIRVEQ 642
E + V++
Sbjct: 307 EKMMVKR 313
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLK--DANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
+G GS GTVYK G VAVK LK D P + F + V+ K +H N++ L Y
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGY 100
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAK 481
K+ +V + SL+ LH ++ I + A+G+ +H
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQM----FQLIDIARQTAQGMDYLH----AKN 152
Query: 482 VPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG---YKAPEQAEVKR-- 533
+ H ++KS+N+ L + I DFGL+ + + Q + + G + APE ++
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 534 -LSQKADVYSFGVLLLEVLTGRAP 556
S ++DVYS+G++L E++TG P
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYMD 404
+Q+ LED LGKG G VY A I+A+K L A + + ++
Sbjct: 6 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYIT 118
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
A L+ H + +V H ++K N+LL G I+DFG S + P L G
Sbjct: 119 ELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTL 173
Query: 523 -YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + +K D++S GVL E L G+ P +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRL--KDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E +GKG G V++ G VAVK +D R E E Y V+ L+H N++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVM--LRHENILGFIA 98
Query: 420 Y----YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
++ + L+ Y GSL+ L LD + + +VL A GLA +H
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 476 E-YGTAKVP---HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--------Y 523
E +GT P H ++KS N+L+ KNG CI+D GL+++ + +G Y
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 524 KAPE------QAEVKRLSQKADVYSFGVLLLEV 550
APE Q + ++ D+++FG++L EV
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRL--KDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E +GKG G V++ G VAVK +D R E E Y V+ L+H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVM--LRHENILGFIA 69
Query: 420 Y----YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
++ + L+ Y GSL+ L LD + + +VL A GLA +H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHI 123
Query: 476 E-YGTAKVP---HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--------Y 523
E +GT P H ++KS N+L+ KNG CI+D GL+++ + +G Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 524 KAPE------QAEVKRLSQKADVYSFGVLLLEV 550
APE Q + ++ D+++FG++L EV
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRL--KDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E +GKG G V++ G VAVK +D R E E Y V+ L+H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVM--LRHENILGFIA 69
Query: 420 Y----YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
++ + L+ Y GSL+ L LD + + +VL A GLA +H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHI 123
Query: 476 E-YGTAKVP---HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--------Y 523
E +GT P H ++KS N+L+ KNG CI+D GL+++ + +G Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 524 KAPE------QAEVKRLSQKADVYSFGVLLLEV 550
APE Q + ++ D+++FG++L EV
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E +G+G+ GTVY A+ + G VA++++ ++ + V+ + K+PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
Y +E +V +YL GSL ++ +D ++ + L +H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI-ARLGG---YKAPEQAEVKRLSQ 536
+V H ++KS N+LL +G ++DFG + P Q+ + + G + APE K
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
K D++S G++ +E++ G P +P R
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 34/228 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLK-DAN-----PCARKEFEQYMDVIGKLKHPNVV 415
E +G+G+ G VYKA G IVA+KR++ DA A +E + ++ +L HPN+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHHPNIV 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
L +++ LV++++ L +L N+ + D +I L RG+A HQ
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ---DSQIKIYLY-QLLRGVAHCHQ 137
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAE 530
++ H ++K N+L++ +G ++DFGL+ PV++ Y+AP+
Sbjct: 138 H----RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
K+ S D++S G + E++TG+ P P V +++Q LPK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK-------PLFPGVTDDDQ---LPK 231
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E +G+G+ GTVY A+ + G VA++++ ++ + V+ + K+PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
Y +E +V +YL GSL ++ +D ++ + L +H +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 136
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA----IARLGGYKAPEQAEVKRLSQ 536
+V H ++KS N+LL +G ++DFG + P Q+ + + APE K
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
K D++S G++ +E++ G P +P R
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E +G+G+ GTVY A+ + G VA++++ ++ + V+ + K+PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
Y +E +V +YL GSL ++ +D ++ + L +H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA----IARLGGYKAPEQAEVKRLSQ 536
+V H ++KS N+LL +G ++DFG + P Q+ + + APE K
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
K D++S G++ +E++ G P +P R
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 34/228 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLK-DAN-----PCARKEFEQYMDVIGKLKHPNVV 415
E +G+G+ G VYKA G IVA+KR++ DA A +E + ++ +L HPN+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHHPNIV 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
L +++ LV++++ L +L N+ + D +I L RG+A HQ
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ---DSQIKIYLY-QLLRGVAHCHQ 137
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPEQAE- 530
++ H ++K N+L++ +G ++DFGL+ PV++ Y+AP+
Sbjct: 138 H----RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
K+ S D++S G + E++TG+ P P V +++Q LPK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK-------PLFPGVTDDDQ---LPK 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E +G+G+ GTVY A+ + G VA++++ ++ + V+ + K+PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
Y +E +V +YL GSL ++ +D ++ + L +H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH----SN 135
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA----IARLGGYKAPEQAEVKRLSQ 536
+V H ++KS N+LL +G ++DFG + P Q+ + + APE K
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
K D++S G++ +E++ G P +P R
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDD-GGIVAVKRLKDAN---PCARKEFEQYMDV 405
Q+ LED LGKG G VY A I+A+K L A + + +++
Sbjct: 1 QWALEDF--EIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEI 58
Query: 406 IGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
L+HPN+++L Y++ L+ +Y P G+++ L D + +
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATYITE 113
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GY 523
A L+ H + +V H ++K N+LL G I+DFG S+ + G Y
Sbjct: 114 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 169
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
PE E + +K D++S GVL E L G+ P +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 26/239 (10%)
Query: 362 EMLGKGSLGTVYKAVLDD--GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+ +GKG G V +L D G VAVK +K N + F V+ +L+H N+V+L
Sbjct: 18 QTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 420 YYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ L +V +Y+ GSL L R GR L + L + +
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 127
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARL-GGYKAPEQAEVKRLSQK 537
H ++ + NVL+ ++ VA +SDFGL+ + Q +L + APE S K
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 538 ADVYSFGVLLLEVLT-GRAPSQYPS-PTRPRVDEEEQAVDL------PKWVRSVVKEEW 588
+DV+SFG+LL E+ + GR P YP P + V E+ + P V V+K W
Sbjct: 186 SDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW 242
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 66 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 120
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 121 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 135/307 (43%), Gaps = 52/307 (16%)
Query: 364 LGKGSLGTVYKAVL------DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+G G V KA VAVK LK+ A+P ++ +V+ ++ HP+V+K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--GPGRI---------PLDWTTRISLVLG 465
L LL+ +Y GSL L +R GPG + LD +L +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 466 ----AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL-LLNPVQAIARL 520
A +++ Q + H ++ + N+L+ + ISDFGLS + + R
Sbjct: 151 DLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 521 GG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
G + A E + ++DV+SFGVLL E++T P P P
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---LGGNPYPGIP---------- 257
Query: 576 LPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMI 635
P+ + +++K + R N EE+ ++ L C +P+KRP A+++K +
Sbjct: 258 -PERLFNLLKT-------GHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 636 EDIRVEQ 642
E + V++
Sbjct: 307 EKMMVKR 313
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 88
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 89 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 143
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 144 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 87
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 88 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 142
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 143 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 62
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 63 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 117
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 118 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 61 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 116 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 362 EMLGKGSLGTVYKAVL------DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNV 414
E LG+ G VYK L + VA+K LKD A R+EF + +L+HPNV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLL-----HGNRGPG------RIPLDWTTRISLV 463
V L + +++ Y +G LH L H + G + L+ + LV
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A G+ + + V H ++ + NVL+ ISD GL + LG
Sbjct: 152 AQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 523 -----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP-SQYPSPTRPRVDEEEQAV- 574
+ APE + S +D++S+GV+L EV + G P Y + + Q +
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 267
Query: 575 ---DLPKWVRSVVKEEWTAEVFDQELLRYKNIEEEL 607
D P WV +++ E W F R+K+I L
Sbjct: 268 CPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 301
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 66 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 120
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 121 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 362 EMLGKGSLGTVYKAVL------DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNV 414
E LG+ G VYK L + VA+K LKD A R+EF + +L+HPNV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLL-----HGNRGPG------RIPLDWTTRISLV 463
V L + +++ Y +G LH L H + G + L+ + LV
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
A G+ + + V H ++ + NVL+ ISD GL + LG
Sbjct: 135 AQIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 523 -----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP-SQYPSPTRPRVDEEEQAV- 574
+ APE + S +D++S+GV+L EV + G P Y + + Q +
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 250
Query: 575 ---DLPKWVRSVVKEEWTAEVFDQELLRYKNIEEEL 607
D P WV +++ E W F R+K+I L
Sbjct: 251 CPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 284
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDAN-PCARKEFEQYMDVIGKLKHPNV 414
++LG G+ GTVYK + G VA+K L + P A EF ++ + HP++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGP--GRIPLDWTTRISLVLGAARGLAR 472
V+L + +L V +P+G L +H ++ ++ L+W +I A+G+
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 155
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------ 526
+ + ++ H ++ + NVL+ I+DFGL+ LL + G K P
Sbjct: 156 LEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
E ++ + ++DV+S+GV + E++T PTR D E+ LP+
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ 263
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDAN-PCARKEFEQYMDVIGKLKHPNV 414
++LG G+ GTVYK + G VA+K L + P A EF ++ + HP++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGP--GRIPLDWTTRISLVLGAARGLAR 472
V+L + +L V +P+G L +H ++ ++ L+W +I A+G+
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 132
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------ 526
+ + ++ H ++ + NVL+ I+DFGL+ LL + G K P
Sbjct: 133 LEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
E ++ + ++DV+S+GV + E++T PTR D E+ LP+
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ 240
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARK-EFEQYMDVIGKLKH 411
EDL+ E +G+G+ G V+ L D +VAVK ++ P K +F Q ++ + H
Sbjct: 114 EDLVLG--EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH 171
Query: 412 PNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
PN+V+L K+ +V + + G + L R+ T + +V AA G+
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGM- 226
Query: 472 RIHQEYGTAKV-PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------- 522
EY +K H ++ + N L+ + V ISDFG+S + G
Sbjct: 227 ----EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVK 280
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDE 569
+ APE R S ++DV+SFG+LL E + A S YP+ + + E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGA-SPYPNLSNQQTRE 326
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 23/226 (10%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARK-EFEQYMDVIGKLKH 411
EDL+ E +G+G+ G V+ L D +VAVK ++ P K +F Q ++ + H
Sbjct: 114 EDLVLG--EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH 171
Query: 412 PNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
PN+V+L K+ +V + + G + L R+ T + +V AA G+
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAAAGM- 226
Query: 472 RIHQEYGTAKV-PHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------Y 523
EY +K H ++ + N L+ + V ISDFG+S A GG +
Sbjct: 227 ----EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKW 281
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDE 569
APE R S ++DV+SFG+LL E + A S YP+ + + E
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGA-SPYPNLSNQQTRE 326
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 343 VFYERKKQFEL-------EDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA 395
++++ KQ+E ED E LG G+ G VYKA + ++A ++ D +
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTK--S 74
Query: 396 RKEFEQYM---DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI 452
+E E YM D++ HPN+VKL +Y + ++ ++ G++ +++ P
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT- 133
Query: 453 PLDWTTRISLVLGAA-RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL 511
++I +V L +H K+ H ++K+ N+L +G ++DFG+S
Sbjct: 134 ----ESQIQVVCKQTLDALNYLHDN----KIIHRDLKAGNILFTLDGDIKLADFGVS--A 183
Query: 512 NPVQAIARLGGY------KAP-----EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ I R + AP E ++ + KADV+S G+ L+E+ P
Sbjct: 184 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 561 SPTR 564
+P R
Sbjct: 244 NPMR 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 343 VFYERKKQFEL-------EDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA 395
++++ KQ+E ED E LG G+ G VYKA + ++A ++ D +
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTK--S 74
Query: 396 RKEFEQYM---DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI 452
+E E YM D++ HPN+VKL +Y + ++ ++ G++ +++ P
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT- 133
Query: 453 PLDWTTRISLVLGAA-RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL 511
++I +V L +H K+ H ++K+ N+L +G ++DFG+S
Sbjct: 134 ----ESQIQVVCKQTLDALNYLHDN----KIIHRDLKAGNILFTLDGDIKLADFGVS--A 183
Query: 512 NPVQAIARLGGY------KAP-----EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ I R + AP E ++ + KADV+S G+ L+E+ P
Sbjct: 184 KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 561 SPTR 564
+P R
Sbjct: 244 NPMR 247
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ Y A + +V + SL+ LH + I + A+
Sbjct: 61 TRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL---LNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + + +L G
Sbjct: 116 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 25/235 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E +G+G+ G VYKA + G A+K RL+ + + + ++ +LKH N+VKL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+ K+ +LV+++L + L LL G L+ T S +L G+A H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQA----IARLGGYKAPE-QAEVKR 533
+V H ++K N+L+++ G I+DFGL+ PV+ I L Y+AP+ K+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL-WYRAPDVLMGSKK 177
Query: 534 LSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEW 588
S D++S G + E++ G +P P V E +Q + + + + + + W
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG-------TPLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E +G+G+ G VYKA + G A+K RL+ + + + ++ +LKH N+VKL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+ K+ +LV+++L + L LL G L+ T S +L G+A H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVKRL 534
+V H ++K N+L+++ G I+DFGL+ PV+ Y+AP+ K+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEW 588
S D++S G + E++ G +P P V E +Q + + + + + + W
Sbjct: 179 STTIDIWSVGCIFAEMVNG-------TPLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 88
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 89 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 143
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL---LLNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + +L G
Sbjct: 144 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 343 VFYERKKQFEL-------EDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA 395
++++ KQ+E ED E LG G+ G VYKA + ++A ++ D +
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTK--S 74
Query: 396 RKEFEQYM---DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI 452
+E E YM D++ HPN+VKL +Y + ++ ++ G++ +++ P
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT- 133
Query: 453 PLDWTTRISLVLGAA-RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL 511
++I +V L +H K+ H ++K+ N+L +G ++DFG+S
Sbjct: 134 ----ESQIQVVCKQTLDALNYLHDN----KIIHRDLKAGNILFTLDGDIKLADFGVS--A 183
Query: 512 NPVQAIARLGGY------KAP-----EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ I R + AP E ++ + KADV+S G+ L+E+ P
Sbjct: 184 KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 561 SPTR 564
+P R
Sbjct: 244 NPMR 247
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E +G+G+ G VYKA + G A+K RL+ + + + ++ +LKH N+VKL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+ K+ +LV+++L + L LL G L+ T S +L G+A H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVKRL 534
+V H ++K N+L+++ G I+DFGL+ PV+ Y+AP+ K+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEW 588
S D++S G + E++ G +P P V E +Q + + + + + + W
Sbjct: 179 STTIDIWSVGCIFAEMVNG-------APLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 80
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 81 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 135
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL---LLNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + +L G
Sbjct: 136 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGK 408
+E+ D + +G GS GTVYK G VAVK L P + + F+ + V+ K
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+H N++ L Y K + +V + SL+ LH + I + A+
Sbjct: 61 TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQ 115
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL---LLNPVQAIARLGG--- 522
G+ +H + + H ++KS+N+ L ++ I DFGL+ + +L G
Sbjct: 116 GMDYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
+ APE ++ S ++DVY+FG++L E++TG+ P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G +VAVK LK DA P R ++Q +D++ L H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 418 RAYY--YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+ LV +Y+P GSL L R + + G+A +H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKAPEQ 528
++ H ++ + NVLLD + + I DFGL+ + R+ + APE
Sbjct: 153 QHYI----HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
+ + +DV+SFGV L E+LT SQ P PT+
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTK 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G G V A + VAVK LKD K+ + M +IGK
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 86
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 87 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 146 LV-SCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 248
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G G V A + VAVK LKD K+ + M +IGK
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 145
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 146 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 205 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 307
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 100 -HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 100 -HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDAN---PCARKEFEQYMD 404
+ F ++D LGKG G VY A IVA+K L + + + ++
Sbjct: 18 RHFTIDDF--EIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ L HPN+++L Y+Y + L+ +Y P G L+ L + D +++
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-----CTFDEQRTATIME 130
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--G 522
A L H + KV H ++K N+LL G I+DFG S+ ++ G
Sbjct: 131 ELADALMYCHGK----KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLD 186
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
Y PE E + ++K D++ GVL E+L G P +
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G G V A + VAVK LKD K+ + M +IGK
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 88
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 89 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 148 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 250
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 41/279 (14%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKR-----LKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+G+G VY+A L DG VA+K+ L DA AR + + +D++ +L HPNV+K
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK--ARADCIKEIDLLKQLNHPNVIKY 97
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
A + E +V + G L ++ H + IP + + L +A L +H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--LEHMH-- 153
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR-LGG---YKAPEQAEVK 532
+ +V H ++K +NV + GV + D GL + A L G Y +PE+
Sbjct: 154 --SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEV 592
+ K+D++S G LL E+ ++P ++ L K + ++
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSPF---------YGDKMNLYSLCKKIEQCDYPPLPSDH 262
Query: 593 FDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEV 631
+ +EL +LV+M C+ PEKRP + V
Sbjct: 263 YSEEL-------RQLVNM------CINPDPEKRPDVTYV 288
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G G V A + VAVK LKD K+ + M +IGK
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 91
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 92 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 151 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A + VAVK LKD A + M+++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG R+P + T LV
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV-S 161
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ +Y G+L L R PG R+P + T
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ +L ++ G K P
Sbjct: 147 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 259
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 260 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 300
Query: 646 GEEY 649
GE Y
Sbjct: 301 GEHY 304
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 35/216 (16%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI---VAVKRLKD-ANPCARKEFEQYMDVIGKL-KHPNVVK 416
+++G+G+ G V KA + G+ A+KR+K+ A+ ++F ++V+ KL HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 417 L------RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP-----------LDWTTR 459
L R Y Y L +Y P+G+L L +R P L
Sbjct: 88 LLGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 460 ISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAI 517
+ ARG+ + Q+ + H N+ + N+L+ +N VA I+DFGLS + + +
Sbjct: 142 LHFAADVARGMDYLSQK----QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 518 ARL-GGYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
RL + A E + +DV+S+GVLL E+++
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNV 414
L + +GKGS G VYK + + V ++ D ++ +Q + V+ + P +
Sbjct: 20 LFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ Y + ++ +YL GS LL PG PL+ T +++ +GL +H
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLK----PG--PLEETYIATILREILKGLDYLH 133
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAE 530
E + H ++K++NVLL + G ++DFG++ L Q + APE +
Sbjct: 134 SE----RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 189
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
KAD++S G+ +E+ G P+ P R
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAY 420
E +GKG G V++ G VAVK + +E E Y V+ L+H N++
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 62
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ A + K LV DY +GSL L+ R + I L L A GLA
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 116
Query: 473 IHQEY----GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIA------RLGG 522
+H E G + H ++KS N+L+ KNG CI+D GL++ + R+G
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 523 --YKAPE----QAEVKRLS--QKADVYSFGVLLLEV 550
Y APE +K ++AD+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAY 420
E +GKG G V++ G VAVK + +E E Y V+ L+H N++
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 67
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ A + K LV DY +GSL L+ R + I L L A GLA
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 121
Query: 473 IHQEY----GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIA------RLGG 522
+H E G + H ++KS N+L+ KNG CI+D GL++ + R+G
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 523 --YKAPE----QAEVKRLS--QKADVYSFGVLLLEV 550
Y APE +K ++AD+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAY 420
E +GKG G V++ G VAVK + +E E Y V+ L+H N++
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 100
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ A + K LV DY +GSL L+ R + I L L A GLA
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 154
Query: 473 IHQEY----GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIA------RLGG 522
+H E G + H ++KS N+L+ KNG CI+D GL++ + R+G
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 523 --YKAPE----QAEVKRLS--QKADVYSFGVLLLEV 550
Y APE +K ++AD+Y+ G++ E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ Y G+L L R PG R+P + T
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 364 LGKGSLGTVYKAVL--------DDGGIVAVKRLKDANPCARKEFE------QYMDVIGKL 409
LG+G+ G V A + VAVK LKD K+ + M +IGK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGK- 99
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRIS 461
H N++ L ++ Y G+L L R PG R+P + T
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV LAR + + K H ++ + NVL+ +N V I+DFGL+ +N + +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 522 G------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVL+ E+ T G +P YP
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YP 261
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAY 420
E +GKG G V++ G VAVK + +E E Y V+ L+H N++
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 64
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ A + K LV DY +GSL L+ R + I L L A GLA
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 118
Query: 473 IHQEY----GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIA------RLGG 522
+H E G + H ++KS N+L+ KNG CI+D GL++ + R+G
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 523 --YKAPE----QAEVKRLS--QKADVYSFGVLLLEV 550
Y APE +K ++AD+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAY 420
E +GKG G V++ G VAVK + +E E Y V+ L+H N++
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 87
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ A + K LV DY +GSL L+ R + I L L A GLA
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 141
Query: 473 IHQEY----GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIA------RLGG 522
+H E G + H ++KS N+L+ KNG CI+D GL++ + R+G
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 523 --YKAPE----QAEVKRLS--QKADVYSFGVLLLEV 550
Y APE +K ++AD+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-VAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E LG G+ TVYK + G+ VA+K +K D+ + + ++ +LKH N+V+L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 420 YYYAKEEKLLVYDYLPNG---SLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
+ + + LV++++ N + S GN P + L+ L +GLA H+
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNT-PRGLELNLVKYFQWQL--LQGLAFCHEN 127
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLS----LLLNPVQAIARLGGYKAPEQAEVK 532
K+ H ++K N+L++K G + DFGL+ + +N + Y+AP+
Sbjct: 128 ----KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 533 R-LSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQ 572
R S D++S G +L E++TG+ P P ++EEQ
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK-------PLFPGTNDEEQ 217
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG+GS G+VYKA+ + G IVA+K++ + +E + + ++ + P+VVK
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGS 92
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
Y+ + +V +Y GS+ ++ L +++ +GL +H
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKGLEYLH----FM 144
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA----IARLGGYKAPEQAEVKRLSQ 536
+ H ++K+ N+LL+ G A ++DFG++ L A + + APE + +
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 537 KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
AD++S G+ +E+ G+ P P R
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMR 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAY 420
E +GKG G V++ G VAVK + +E E Y V+ L+H N++
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 61
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ A + K LV DY +GSL L+ R + I L L A GLA
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 115
Query: 473 IHQEY----GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIA------RLGG 522
+H E G + H ++KS N+L+ KNG CI+D GL++ + R+G
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 523 --YKAPE----QAEVKRLS--QKADVYSFGVLLLEV 550
Y APE +K ++AD+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 351 FELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCA-----RKEFEQYMDV 405
F+ ++LRA +GKGS G V +D + + + C R F++ + +
Sbjct: 14 FDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKE-LQI 68
Query: 406 IGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
+ L+HP +V L + +E+ +V D L G L L N + T +
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN-----VHFKEETVKLFICE 123
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
L + + ++ H ++K N+LLD++G I+DF ++ +L I + G
Sbjct: 124 LVMALDYLQNQ----RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP 179
Query: 523 YKAPEQAEVKR---LSQKADVYSFGVLLLEVLTGRAPSQYPSPT 563
Y APE ++ S D +S GV E+L GR P S T
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+G+GS G V+K D G IVA+K+ ++ +P +K + + ++ +LKHPN+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ K LV++Y + LH L RG +P I+ A H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHN----- 122
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGGYKAPE-QAEVKRLS 535
H +VK N+L+ K+ V + DFG + LL + Y++PE +
Sbjct: 123 -CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 536 QKADVYSFGVLLLEVLTG 553
DV++ G + E+L+G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 352 ELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKH 411
E ++ + +++G GS G V++A L + VA+K++ +E Q M ++ KH
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL-QIMRIV---KH 91
Query: 412 PNVVKLRAYYYAKEEKL------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL- 464
PNVV L+A++Y+ +K LV +Y+P + H + +P+ I L +
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM---LLIKLYMY 148
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLD-KNGVACISDFGLSLLL---NPVQAIARL 520
R LA IH + + H ++K N+LLD +GV + DFG + +L P +
Sbjct: 149 QLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 521 GGYKAPEQAE-VKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE + D++S G ++ E++ G+
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNV 414
L E +GKGS G V+K + + V ++ D ++ +Q + V+ + V
Sbjct: 24 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
K Y + ++ +YL GS LL P D +++ +GL +H
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLH 137
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAE 530
E K H ++K++NVLL + G ++DFG++ L Q + APE +
Sbjct: 138 SE----KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 531 VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
KAD++S G+ +E+ G P+ P R
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKLRAY 420
LG G+ G VYKA + G +A ++ + + +E E Y+ +++ HP +VKL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 421 YYAKEEKLLVYDYLPNGSLHS-LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
YY + ++ ++ P G++ + +L +RG + R L L +H +
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH----S 127
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQAEVKRLS 535
++ H ++K+ NVL+ G ++DFG+S L +Q G + APE + +
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 536 Q-----KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
KAD++S G+ L+E+ P +P R
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKLRAY 420
LG G+ G VYKA + G +A ++ + + +E E Y+ +++ HP +VKL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 421 YYAKEEKLLVYDYLPNGSLHS-LLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
YY + ++ ++ P G++ + +L +RG + R L L +H +
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH----S 135
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQAEVKRLS 535
++ H ++K+ NVL+ G ++DFG+S L +Q G + APE + +
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 536 Q-----KADVYSFGVLLLEVLTGRAPSQYPSPTR 564
KAD++S G+ L+E+ P +P R
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 91
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 143
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 144 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 256
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 257 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 297
Query: 646 GEEY 649
GE Y
Sbjct: 298 GEHY 301
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 98
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 150
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 151 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 263
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 264 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 304
Query: 646 GEEY 649
GE Y
Sbjct: 305 GEHY 308
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDANPCARKEFE---QYMDVIGKLKHPN 413
++LG G GTV+K V G V +K ++D + R+ F+ +M IG L H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 94
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGP--GRIPLDWTTRISLVLGAARGLA 471
+V+L +L V YLP GSL + +RG ++ L+W +I A+G+
Sbjct: 95 IVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 147
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP----- 526
+ +E+G H N+ + NVLL ++DFG++ LL P K P
Sbjct: 148 YL-EEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLT 552
E + + ++DV+S+GV + E++T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 145
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 146 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 258
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 299
Query: 646 GEEY 649
GE Y
Sbjct: 300 GEHY 303
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 152
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 204
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 205 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 317
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 318 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 358
Query: 646 GEEY 649
GE Y
Sbjct: 359 GEHY 362
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 35/216 (16%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI---VAVKRLKD-ANPCARKEFEQYMDVIGKL-KHPNVVK 416
+++G+G+ G V KA + G+ A+KR+K+ A+ ++F ++V+ KL HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 417 L------RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP-----------LDWTTR 459
L R Y Y L +Y P+G+L L +R P L
Sbjct: 81 LLGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 460 ISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAI 517
+ ARG+ + Q+ + H ++ + N+L+ +N VA I+DFGLS + + +
Sbjct: 135 LHFAADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 518 ARL-GGYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
RL + A E + +DV+S+GVLL E+++
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 145
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 146 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 258
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 299
Query: 646 GEEY 649
GE Y
Sbjct: 300 GEHY 303
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 364 LGKGSLGTVYKAV------LDDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V++A + +VAVK LK+ A+ + +F++ ++ + +PN+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLL------------HGN-------RGPGRIPLDWT 457
L + L+++Y+ G L+ L H + PG PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 458 TRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI 517
++ + A G+A + + K H ++ + N L+ +N V I+DFGLS +
Sbjct: 175 EQLCIARQVAAGMAYLSER----KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 518 ARLGG------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
G + PE R + ++DV+++GV+L E+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 94
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 147 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 259
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 260 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 300
Query: 646 GEEY 649
GE Y
Sbjct: 301 GEHY 304
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 35/216 (16%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI---VAVKRLKD-ANPCARKEFEQYMDVIGKL-KHPNVVK 416
+++G+G+ G V KA + G+ A+KR+K+ A+ ++F ++V+ KL HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 417 L------RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP-----------LDWTTR 459
L R Y Y L +Y P+G+L L +R P L
Sbjct: 91 LLGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 460 ISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAI 517
+ ARG+ + Q+ + H ++ + N+L+ +N VA I+DFGLS + + +
Sbjct: 145 LHFAADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 518 ARL-GGYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
RL + A E + +DV+S+GVLL E+++
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDANPCARKEFE---QYMDVIGKLKHPN 413
++LG G GTV+K V G V +K ++D + R+ F+ +M IG L H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 76
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGP--GRIPLDWTTRISLVLGAARGLA 471
+V+L +L V YLP GSL + +RG ++ L+W +I A+G+
Sbjct: 77 IVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 129
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP----- 526
+ +E+G H N+ + NVLL ++DFG++ LL P K P
Sbjct: 130 YL-EEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLT 552
E + + ++DV+S+GV + E++T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 37/234 (15%)
Query: 352 ELEDLLRASAE-----MLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQY 402
+LED+L + MLGKG G+V +A L +DG V AVK LK A+ A + E++
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK-ADIIASSDIEEF 72
Query: 403 MD---VIGKLKHPNVVKLRAYYYAKEEK------LLVYDYLPNGSLHSLLHGNR---GPG 450
+ + + HP+V KL K +++ ++ +G LH+ L +R P
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 451 RIPLDWTTRISLVLGAARGLARIHQEYGTAK-VPHGNVKSSNVLLDKNGVACISDFGLSL 509
+PL T + ++ A G+ EY +++ H ++ + N +L ++ C++DFGLS
Sbjct: 133 NLPLQ--TLVRFMVDIACGM-----EYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 510 LLNPVQAIARLGGYKAP------EQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + K P E + +DV++FGV + E++T G+ P
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 144
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 145 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 257
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 258 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 298
Query: 646 GEEY 649
GE Y
Sbjct: 299 GEHY 302
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 88
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + + I L A+G+ +
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYL 144
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 145 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 253
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 254 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 294
Query: 646 GEEY 649
GE Y
Sbjct: 295 GEHY 298
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG-----IVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNV 414
++LG G+ GTVYK + G VA+K L++ +P A KE V+ + P V
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGP--GRIPLDWTTRISLVLGAARGLAR 472
+L +L V +P G L + NRG + L+W +I A+G++
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------ 526
+ ++ H ++ + NVL+ I+DFGL+ LL+ + G K P
Sbjct: 135 LED----VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
E +R + ++DV+S+GV + E++T A P R D E+ LP+
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ 242
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 145
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 146 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVK 585
E + ++ + K+DV+SFGVLL E++T AP P V+ + V L + R +++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQG-RRLLQ 258
Query: 586 EEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQSPL 645
E+ + + V L C + E RP+ +E+ I I + +
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF--STFI 299
Query: 646 GEEY 649
GE Y
Sbjct: 300 GEHY 303
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 362 EMLGK-GSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKL 417
E++G+ G G VYKA + ++A ++ D + +E E YM D++ HPN+VKL
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKL 72
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAA-RGLARIHQE 476
+Y + ++ ++ G++ +++ P ++I +V L +H
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLT-----ESQIQVVCKQTLDALNYLHDN 127
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGY------KAP---- 526
K+ H ++K+ N+L +G ++DFG+S N I R + AP
Sbjct: 128 ----KIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
E ++ + KADV+S G+ L+E+ P +P R
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 92
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 144
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 145 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKL 417
E+LG G + V+ A L D VAVK L+ +P F + L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 418 ----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
A A +V +Y+ +L ++H P+ I ++ A + L
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGG---YKAP 526
HQ + H +VK +N+L+ + DFG++ + N V A + G Y +P
Sbjct: 133 HQN----GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSP 562
EQA + ++DVYS G +L EVLTG P SP
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + + G IPL S + +GLA H
Sbjct: 71 LDVIHTENKLYLVFEFL-HQDLKTFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 125
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 30/206 (14%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLK-----DANPCARKEFEQYMDVIGKLKHPNVV 415
+ LG+G TVYKA + IVA+K++K +A + + + ++ +L HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR---GPGRIPLDWTTRISLVLGAARGLAR 472
L + K LV+D++ L ++ N P I + +L +GL
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIK-------AYMLMTLQGLEY 127
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP------VQAIARLGGYKAP 526
+HQ + + H ++K +N+LLD+NGV ++DFGL+ Q + R Y+AP
Sbjct: 128 LHQHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW--YRAP 181
Query: 527 EQAEVKRL-SQKADVYSFGVLLLEVL 551
E R+ D+++ G +L E+L
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAV-KRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G+ G V++ V G V V K + P + + + ++ +L HP ++ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ K E +L+ ++L G L + + I+ + A GL +H+
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEH---- 168
Query: 481 KVPHGNVKSSNVLLDKNGVACIS--DFGLSLLLNP---VQAIARLGGYKAPEQAEVKRLS 535
+ H ++K N++ + + + DFGL+ LNP V+ + APE + + +
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVG 228
Query: 536 QKADVYSFGVLLLEVLTGRAP 556
D+++ GVL +L+G +P
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSP 249
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR-KEFEQYMDVIGKLKHPNVVKLRAYYY 422
+GKG G V+ G VAVK + +E E Y V+ ++H N++ A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAADI 101
Query: 423 ----AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY- 477
+ + L+ DY NGSL+ L LD + + L + GL +H E
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 478 ---GTAKVPHGNVKSSNVLLDKNGVACISDFGLSL-LLNPVQAI-----ARLGG--YKAP 526
G + H ++KS N+L+ KNG CI+D GL++ ++ + R+G Y P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 527 EQAEVKRLSQK-------ADVYSFGVLLLEV 550
E + + L++ AD+YSFG++L EV
Sbjct: 216 EVLD-ESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 44/275 (16%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDAN--PCARKE-----FEQYMDVIGKLKHPNVVK 416
LG G + TVY A + I+ +K A P KE FE+ + +L H N+V
Sbjct: 19 LGGGGMSTVYLA---EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + LV +Y+ +L + HG PL T I+ G+ H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAH 128
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPV---QAIARLGG--YKAPEQA 529
++ H ++K N+L+D N I DFG++ L+ Q LG Y +PEQA
Sbjct: 129 D----MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAV---------DLPKWV 580
+ + + D+YS G++L E+L G P + + + +V D+P+ +
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244
Query: 581 RSVVKEEWTAEVFDQELLRYKNIEE---ELVSMLH 612
+V+ + + RYK I+E +L S+LH
Sbjct: 245 SNVILRATEKDKAN----RYKTIQEMKDDLSSVLH 275
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKL 417
E+LG G + V+ A L D VAVK L+ +P F + L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 418 ----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
A A +V +Y+ +L ++H P+ I ++ A + L
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGG---YKAP 526
HQ + H +VK +N+++ + DFG++ + N V A + G Y +P
Sbjct: 133 HQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSP 562
EQA + ++DVYS G +L EVLTG P SP
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 72 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 124
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G +VAVK LK+ P R +++ ++++ L H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 418 RAYYYAKEEK--LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR---GLAR 472
+ + EK LV +Y+P GSL L P L+L A + G+A
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLLFAQQICEGMAY 126
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKA 525
+H ++ H + + NVLLD + + I DFGL+ + R+ + A
Sbjct: 127 LHAQHYI----HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
PE + + +DV+SFGV L E+LT +Q P
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 217
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G +VAVK LK+ P R +++ ++++ L H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 418 RAYYYAKEEK--LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR---GLAR 472
+ + EK LV +Y+P GSL L P L+L A + G+A
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLLFAQQICEGMAY 127
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKA 525
+H ++ H + + NVLLD + + I DFGL+ + R+ + A
Sbjct: 128 LHAQHYI----HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
PE + + +DV+SFGV L E+LT +Q P
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKL 417
E+LG G + V+ A L D VAVK L+ +P F + L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 418 ----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
A A +V +Y+ +L ++H P+ I ++ A + L
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGG---YKAP 526
HQ + H +VK +N+++ + DFG++ + N V A + G Y +P
Sbjct: 133 HQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSP 562
EQA + ++DVYS G +L EVLTG P SP
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 119
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 119
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 93
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 145
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 146 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 239
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 75 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 127
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 75 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 127
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 111
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 163
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 164 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 257
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 85
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + + I L A+G+ +
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYL 141
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 142 ----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 231
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 119
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 71 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 123
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 70 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 91
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 143
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 144 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 237
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 71 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 123
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 119
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 112
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 164
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 165 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 362 EMLGKGSLGTVYKAVL--DDGGIV--AVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
E++G+G G VY L +DG + AVK L E Q++ ++ HPNV
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNV 90
Query: 415 VKLRAYYYAKE-EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ L E L+V Y+ +G L + + R P + ++G +A+
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKG 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGGYKAP----- 526
+ + K H ++ + N +LD+ ++DFGL+ + ++ G K P
Sbjct: 143 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 527 -EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
E + ++ + K+DV+SFGVLL E++T AP YP
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YP 236
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 70 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 122 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 72 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 126
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 70 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 123 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 71 LDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 125
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVLDDGGI----VAVKRLKDANPCARKE-FEQYMDVIGK 408
E ++ S ++GKG G VY D A+K L + E F + ++
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTR--ISLVLGA 466
L HPNV+ L E L + LP LL R P R P T + IS L
Sbjct: 79 LNHPNVLALIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNP---TVKDLISFGLQV 133
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAI-----AR 519
ARG+ + ++ K H ++ + N +LD++ ++DFGL+ +L ++ AR
Sbjct: 134 ARGMEYLAEQ----KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 520 LG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
L + A E + R + K+DV+SFGVLL E+LT AP
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS-LLHGNRGPGRIPLDWTTRISLV 463
V+ L HPN++KL ++ K LV + G L ++H R+ + ++
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH------RMKFNEVDAAVII 142
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLL-NPVQAIAR 519
G+ +H+ + H ++K N+LL+ K+ + I DFGLS + N + R
Sbjct: 143 KQVLSGVTYLHKH----NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 520 LGG--YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVD 575
LG Y APE K+ +K DV+S GV+L +L G P Q +V++ + D
Sbjct: 199 LGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 576 LPKW 579
P+W
Sbjct: 258 SPEW 261
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 70 LDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 124
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 364 LGKGSLGTVYKAV--LDDGGIVAVKRLKDAN-PCARKEFEQYMDVIGKLKHPNVVKLRAY 420
LG+G G V++A +DD A+KR++ N AR++ + + + KL+HP +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 421 YYAKE--EKLL-----VYDYLPNGSLHSLLHGNRGPGRIPLDWTTR---ISLVLGAARGL 470
+ K EKL VY Y+ + GR ++ R + + L A +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL----------SLLLNPVQAIARL 520
+H + + H ++K SN+ + V + DFGL +L P+ A AR
Sbjct: 132 EFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 521 GG------YKAPEQAEVKRLSQKADVYSFGVLLLEVL 551
G Y +PEQ S K D++S G++L E+L
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 40/286 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + +G + PE + S K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 539 DVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQEL 597
D+++FGVL+ E+ + G+ P + R E A + + +R L
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLR---------------L 240
Query: 598 LRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQS 643
R E++ ++++ +C + ++RPT + I D+ E+S
Sbjct: 241 YRPHLASEKVYTIMY---SCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 69 LDVIHTENKLYLVFEFL-SMDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 123
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 40/286 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + +G + PE + S K+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 539 DVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQEL 597
D+++FGVL+ E+ + G+ P + R E A + + +R L
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLR---------------L 240
Query: 598 LRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQS 643
R E++ ++++ +C + ++RPT + I D+ E+S
Sbjct: 241 YRPHLASEKVYTIMY---SCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 71 LDVIHTENKLYLVFEFL-SMDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 125
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 126 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV++++ + L + + + G IPL S + +GLA H
Sbjct: 67 LDVIHTENKLYLVFEHV-HQDLKTFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 51/264 (19%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E+ +G G V+KA +L++ V + ++D + E+E Y + +KH N+++
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSW-QNEYEVY--SLPGMKHENILQ---- 82
Query: 421 YYAKEEK--------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ E++ L+ + GSL L N + W + ARGLA
Sbjct: 83 FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAY 136
Query: 473 IHQEYGTAK------VPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---- 522
+H++ K + H ++KS NVLL N ACI+DFGL+L ++ G
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGT 196
Query: 523 --YKAPEQAEVKRLSQ-----KADVYSFGVLLLEVLTGRAPS------QYPSPTRPRVD- 568
Y APE E Q + D+Y+ G++L E L R + +Y P +
Sbjct: 197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE-LASRCTAADGPVDEYMLPFEEEIGQ 255
Query: 569 ----EEEQAVDLPKWVRSVVKEEW 588
E+ Q V + K R V+++ W
Sbjct: 256 HPSLEDMQEVVVHKKKRPVLRDYW 279
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAV--LDDGGI-VAVKRLKDANPCA-RKEFEQ 401
++K + ++LL A E LG G+ G+V + V + I VA+K LK A +E +
Sbjct: 327 DKKLFLKRDNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 385
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
++ +L +P +V+L A E +LV + G LH L G R IP+ +
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPV--SNVAE 440
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA--IAR 519
L+ + G+ + ++ H N+ + NVLL A ISDFGLS L + AR
Sbjct: 441 LLHQVSMGMKYLEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496
Query: 520 LGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
G + APE ++ S ++DV+S+GV + E L+ G+ P
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + +G + PE + S K+
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
D+++FGVL+ E+ + G+ P +
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GL+ H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLSFCH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+ +V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 359 ASAEMLGKGSLGTVYKAVLDDGGIVAVKRL--KDANPCARKEFEQYMDVIGKLKHPNVVK 416
A E +GKG G V++ L G VAVK +D R E E Y V+ L+H N++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVL--LRHDNILG 66
Query: 417 LRAYYY----AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
A + + L+ Y +GSL+ L R L+ + L + AA GLA
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAH 120
Query: 473 IHQE-YGTAKVP---HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------ 522
+H E +GT P H + KS NVL+ N CI+D GL+++ + +G
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 523 --YKAPE------QAEVKRLSQKADVYSFGVLLLEV 550
Y APE + + + D+++FG++L E+
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 34/237 (14%)
Query: 350 QFELEDL-----LRASAEMLGKGSLGTVYKAVL--DDGGI--VAVKRLKDANPCARKEFE 400
Q +LED+ L ++LG+G G+V + L +DG VAVK +K N +++E E
Sbjct: 23 QNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIE 81
Query: 401 QYMDVIGKLK---HPNVVKLRAYYYAKEEK-----LLVYDYLPNGSLHSLLHGNR---GP 449
+++ +K HPNV++L + +++ ++ G LH+ L +R GP
Sbjct: 82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP 141
Query: 450 GRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL 509
IPL T + ++ A G+ + H ++ + N +L + C++DFGLS
Sbjct: 142 KHIPLQ--TLLKFMVDIALGMEYL----SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
Query: 510 LLNPVQA-----IARL-GGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ IA++ + A E + + K+DV++FGV + E+ T R + YP
Sbjct: 196 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT-RGMTPYP 251
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + +G + PE + S K+
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
D+++FGVL+ E+ + G+ P +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 40/286 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + +G + PE + S K+
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 539 DVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQEL 597
D+++FGVL+ E+ + G+ P + R E A + + +R L
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLR---------------L 231
Query: 598 LRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIRVEQS 643
R E++ ++++ +C + ++RPT + I D+ E+S
Sbjct: 232 YRPHLASEKVYTIMY---SCWHEKADERPTFKILLSNILDVMDEES 274
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 364 LGKGSLGTV-YKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG+G V L DG A+KR+ R+E ++ D+ HPN+++L AY
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 423 ----AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
AK E L+ + G+L + + + G L + L+LG RGL IH + G
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGLEAIHAK-G 154
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFG-------------LSLLLNPVQAIARLGGYKA 525
A H ++K +N+LL G + D G +L L A Y+A
Sbjct: 155 YA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 526 PEQAEVKR---LSQKADVYSFGVLLLEVLTGRAP 556
PE V+ + ++ DV+S G +L ++ G P
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 350 QFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYM---DV 405
+ ++ED + +MLGKGS G V+ A A+K LK + E M V
Sbjct: 13 KLKIEDFI--LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 406 IG-KLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ +HP + + + KE V +YL G L + D +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFYAA 125
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIARLG- 521
GL +H + + + ++K N+LLDK+G I+DFG+ +L + G
Sbjct: 126 EIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGT 181
Query: 522 -GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE ++ + D +SFGVLL E+L G++P
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + +G + PE + S K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
D+++FGVL+ E+ + G+ P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+ RL + + ++ +L HPN+VKL
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+ RL + + ++ +L HPN+VKL
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV+++L + L + + G IPL S + +GLA H
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYM---DVIG-KLKHPNVVK 416
+MLGKGS G V+ A A+K LK + E M V+ +HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
+ + KE V +YL G L + D + GL +H
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLH-- 136
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIARLG--GYKAPEQAEVK 532
+ + + ++K N+LLDK+G I+DFG+ +L + G Y APE +
Sbjct: 137 --SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
+ + D +SFGVLL E+L G++P
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
E++G G+ G VYK G +A ++ D +E +Q ++++ K H + A Y
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI---ATY 86
Query: 422 YA----------KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
Y ++ LV ++ GS+ L+ +G + +W I + RGL+
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREI--LRGLS 143
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGY------KA 525
+HQ KV H ++K NVLL +N + DFG+S L+ + + R + A
Sbjct: 144 HLHQH----KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD--RTVGRRNTFIGTPYWMA 197
Query: 526 PEQAEVKR-----LSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
PE K+D++S G+ +E+ G P P R
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV----YKAVLDDGGIVAVKRLKDANPCAR 396
K+V R Q + ED +++G+G+ G V +KA + A+K L R
Sbjct: 62 KIVKKIRGLQMKAEDY--DVVKVIGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKR 116
Query: 397 KE---FEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP 453
+ F + D++ P VV+L + + +V +Y+P G L +L+ P +
Sbjct: 117 SDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWA 176
Query: 454 LDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP 513
+T + L L A + IH++ VK N+LLDK+G ++DFG + ++
Sbjct: 177 KFYTAEVVLALDAIHSMGLIHRD----------VKPDNMLLDKHGHLKLADFGTCMKMDE 226
Query: 514 ---VQAIARLG--GYKAPE----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
V +G Y +PE Q ++ D +S GV L E+L G P
Sbjct: 227 TGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G+ G V++ G A K + + ++ + + + L+HP +V L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ E +++Y+++ G L + + + + +GL +H+
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHEN---- 274
Query: 481 KVPHGNVKSSNVLL--DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
H ++K N++ ++ + DFGL+ L+P Q++ G + APE AE K +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 536 QKADVYSFGVLLLEVLTGRAP 556
D++S GVL +L+G +P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVK--RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
E +G+G+ G VYKA G +VA+K RL + + ++ +L HPN+VKL
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + + LV++++ + L + + G IPL S + +GLA H
Sbjct: 71 LDVIHTENKLYLVFEHV-DQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCHSH- 125
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPE-QAEVK 532
+V H ++K N+L++ G ++DFGL+ PV+ Y+APE K
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
S D++S G + E++T RA
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 357 LRASAE------MLGKGSLGTV----YKAVLDDGGIVAVKRLKDANPCARKE---FEQYM 403
LR AE ++G+G+ G V +K+ + A+K L R + F +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLL--VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
D++ P VV+L +Y ++++ L V +Y+P G L +L+ P + +T +
Sbjct: 126 DIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP---VQAIA 518
L L A + IH++ VK N+LLDK+G ++DFG + +N V+
Sbjct: 184 LALDAIHSMGFIHRD----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 519 RLG--GYKAPE----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+G Y +PE Q ++ D +S GV L E+L G P
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 357 LRASAE------MLGKGSLGTV----YKAVLDDGGIVAVKRLKDANPCARKE---FEQYM 403
LR AE ++G+G+ G V +K+ + A+K L R + F +
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLL--VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
D++ P VV+L +Y ++++ L V +Y+P G L +L+ P + +T +
Sbjct: 121 DIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 178
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP---VQAIA 518
L L A + IH++ VK N+LLDK+G ++DFG + +N V+
Sbjct: 179 LALDAIHSMGFIHRD----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 519 RLG--GYKAPE----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+G Y +PE Q ++ D +S GV L E+L G P
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKL 417
E+LG G + V+ A L VAVK L+ +P F + L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 418 RAYYYAKEEK----LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
A A+ +V +Y+ +L ++H P+ I ++ A + L
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGG---YKAP 526
HQ + H +VK +N+++ + DFG++ + N V A + G Y +P
Sbjct: 133 HQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSP 562
EQA + ++DVYS G +L EVLTG P SP
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E LG G+ G V++ G A K + + ++ + + + L+HP +V L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ E +++Y+++ G L + + + + +GL +H+
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHEN---- 168
Query: 481 KVPHGNVKSSNVLL--DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
H ++K N++ ++ + DFGL+ L+P Q++ G + APE AE K +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 536 QKADVYSFGVLLLEVLTGRAP 556
D++S GVL +L+G +P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 357 LRASAE------MLGKGSLGTV----YKAVLDDGGIVAVKRLKDANPCARKE---FEQYM 403
LR AE ++G+G+ G V +K+ + A+K L R + F +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLL--VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
D++ P VV+L +Y ++++ L V +Y+P G L +L+ P + +T +
Sbjct: 126 DIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP---VQAIA 518
L L A + IH++ VK N+LLDK+G ++DFG + +N V+
Sbjct: 184 LALDAIHSMGFIHRD----------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 519 RLG--GYKAPE----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+G Y +PE Q ++ D +S GV L E+L G P
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
+LGKG+ G VY L + +A+K + + + + + + + LKH N+V+ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGP---GRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ + +P GSL +LL GP + + T+ L GL +H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN-- 141
Query: 479 TAKVPHGNVKSSNVLLDK-NGVACISDFGLSLLL---NP-VQAIARLGGYKAPEQAEV-- 531
++ H ++K NVL++ +GV ISDFG S L NP + Y APE +
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+ + AD++S G ++E+ TG+ P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYA 423
LG G G V VA+K +K+ + + EF + V+ L H +V+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 424 KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVP 483
+ ++ +Y+ NG L + L R + +L + + + + +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 484 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKRLSQKA 538
H ++ + N L++ GV +SDFGLS + + + G + PE + S K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 539 DVYSFGVLLLEVLT-GRAPSQ 558
D+++FGVL+ E+ + G+ P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAV--LDDGGI-VAVKRLKDANPCA-RKEFEQ 401
++K + ++LL A E LG G+ G+V + V + I VA+K LK A +E +
Sbjct: 1 DKKLFLKRDNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 59
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
++ +L +P +V+L A E +LV + G LH L G R IP+ +
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPV--SNVAE 114
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA--IAR 519
L+ + G+ + ++ H ++ + NVLL A ISDFGLS L + AR
Sbjct: 115 LLHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 520 LGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
G + APE ++ S ++DV+S+GV + E L+ G+ P
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A V G +VAVK++ R+ + ++ +H NVV++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L + L+ +H + V
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ----GV 268
Query: 483 PHGNVKSSNVLLDKNGVACISDFGL-SLLLNPVQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG + + V L G + APE +
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
+LGKG+ G VY L + +A+K + + + + + + + LKH N+V+ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGP---GRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ + +P GSL +LL GP + + T+ L GL +H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN-- 127
Query: 479 TAKVPHGNVKSSNVLLDK-NGVACISDFGLSLLL---NP-VQAIARLGGYKAPEQAEV-- 531
++ H ++K NVL++ +GV ISDFG S L NP + Y APE +
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+ + AD++S G ++E+ TG+ P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A V G +VAVK++ R+ + ++ +H NVV++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L + L+ +H + V
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ----GV 148
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNP-VQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG ++ V L G + APE +
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A V G +VAVK++ R+ + ++ +H NVV++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L + L+ +H + V
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ----GV 191
Query: 483 PHGNVKSSNVLLDKNGVACISDFGL-SLLLNPVQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG + + V L G + APE +
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A V G +VAVK++ R+ + ++ +H NVV++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L + L+ +H + V
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ----GV 146
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNP-VQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG ++ V L G + APE +
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKL 417
E+LG G + V+ A L VAVK L+ +P F + L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 418 ----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
A A +V +Y+ +L ++H P+ I ++ A + L
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGG---YKAP 526
HQ + H +VK +N+++ + DFG++ + N V A + G Y +P
Sbjct: 133 HQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSP 562
EQA + ++DVYS G +L EVLTG P SP
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A V G +VAVK++ R+ + ++ +H NVV++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L + L+ +H + V
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ----GV 137
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNP-VQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG ++ V L G + APE +
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A V G +VAVK++ R+ + ++ +H NVV++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L + L+ +H + V
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQ----GV 141
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNP-VQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG ++ V L G + APE +
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF---EQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + V G+ ++ + + ++F E+ + KL+HPN+V+L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + D + I +L +A H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQIL---ESIAYCH---- 122
Query: 479 TAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQA---IARLGGYKAPEQAEVK 532
+ + H N+K N+LL K ++DFGL++ +N +A A GY +PE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
S+ D+++ GV+L +L G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF---EQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + V G+ ++ + + ++F E+ + KL+HPN+V+L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + D + I +L +A H
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQIL---ESIAYCH---- 121
Query: 479 TAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQA---IARLGGYKAPEQAEVK 532
+ + H N+K N+LL K ++DFGL++ +N +A A GY +PE +
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
S+ D+++ GV+L +L G P
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPP 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF---EQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + V G+ ++ + + ++F E+ + KL+HPN+V+L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + D + I +L +A H
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQIL---ESIAYCH---- 145
Query: 479 TAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQA---IARLGGYKAPEQAEVK 532
+ + H N+K N+LL K ++DFGL++ +N +A A GY +PE +
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
S+ D+++ GV+L +L G P
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPP 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF---EQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + V G+ ++ + + ++F E+ + KL+HPN+V+L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + D + I +L +A H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQIL---ESIAYCH---- 122
Query: 479 TAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQA---IARLGGYKAPEQAEVK 532
+ + H N+K N+LL K ++DFGL++ +N +A A GY +PE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
S+ D+++ GV+L +L G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 69/298 (23%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E++G G G V+KA DG +KR+K N A +E + + KL H N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 72
Query: 421 Y---------------YAKEEKLLV-YDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
+ +K + L + ++ G+L + RG LD + L
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFE 129
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+G+ IH + K+ + ++K SN+ L I DFGL L R G
Sbjct: 130 QITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 523 -YKAPEQAEVKRLSQKADVYSFGVLLLEVL----TGRAPSQYPSPTRPRVDEEEQAVDLP 577
Y +PEQ + ++ D+Y+ G++L E+L T S++ + R +
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI---------- 235
Query: 578 KWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMI 635
+++FD+ + K + ++L+S +PE RP +E+ + +
Sbjct: 236 -----------ISDIFDK---KEKTLLQKLLS----------KKPEDRPNTSEILRTL 269
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 31/191 (16%)
Query: 380 GGIVAVKRLKDANPCARKEFEQYMDVIGKLK-HPNVVKLRAYYYAKEEKLLVYDYLPNGS 438
GG + + +++ KE +D++ K+ HPN+++L+ Y LV+D + G
Sbjct: 42 GGSFSAEEVQELREATLKE----VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 97
Query: 439 LHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA----KVPHGNVKSSNVLL 494
L L T +++L R + R E A + H ++K N+LL
Sbjct: 98 LFDYL-------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 144
Query: 495 DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKR------LSQKADVYSFGV 545
D + ++DFG S L+P + + + G Y APE E ++ D++S GV
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 204
Query: 546 LLLEVLTGRAP 556
++ +L G P
Sbjct: 205 IMYTLLAGSPP 215
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+G+GS TVYK + + + VA L+D R+ F++ + + L+HPN+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 421 YYA----KEEKLLVYDYLPNGSLHSLLHGNR-GPGRIPLDWTTRISLVLGAARGLARIHQ 475
+ + K+ +LV + +G+L + L + ++ W +I +GL +H
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 476 EYGTAKVPHGNVKSSNVLLDK-NGVACISDFGLSLLLNPVQAIARLGG--YKAPEQAEVK 532
T + H ++K N+ + G I D GL+ L A A +G + APE E +
Sbjct: 148 R--TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYE-E 204
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYP 560
+ + DVY+FG LE A S+YP
Sbjct: 205 KYDESVDVYAFGXCXLEX----ATSEYP 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 31/191 (16%)
Query: 380 GGIVAVKRLKDANPCARKEFEQYMDVIGKLK-HPNVVKLRAYYYAKEEKLLVYDYLPNGS 438
GG + + +++ KE +D++ K+ HPN+++L+ Y LV+D + G
Sbjct: 55 GGSFSAEEVQELREATLKE----VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 110
Query: 439 LHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA----KVPHGNVKSSNVLL 494
L L T +++L R + R E A + H ++K N+LL
Sbjct: 111 LFDYL-------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 495 DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKR------LSQKADVYSFGV 545
D + ++DFG S L+P + + + G Y APE E ++ D++S GV
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 546 LLLEVLTGRAP 556
++ +L G P
Sbjct: 218 IMYTLLAGSPP 228
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKL 417
E+LG G + V+ A L VAVK L+ +P F + L HP +V
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV-- 92
Query: 418 RAYYYAKEEK-------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGL 470
A Y E + +V +Y+ +L ++H P+ I ++ A + L
Sbjct: 93 -AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQAL 146
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL----NPVQAIARLGG---Y 523
HQ + H +VK +N+++ + DFG++ + N V A + G Y
Sbjct: 147 NFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPT 563
+PEQA + ++DVYS G +L EVLTG P SP
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 31/191 (16%)
Query: 380 GGIVAVKRLKDANPCARKEFEQYMDVIGKLK-HPNVVKLRAYYYAKEEKLLVYDYLPNGS 438
GG + + +++ KE +D++ K+ HPN+++L+ Y LV+D + G
Sbjct: 55 GGSFSAEEVQELREATLKE----VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 110
Query: 439 LHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA----KVPHGNVKSSNVLL 494
L L T +++L R + R E A + H ++K N+LL
Sbjct: 111 LFDYL-------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 495 DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKR------LSQKADVYSFGV 545
D + ++DFG S L+P + + + G Y APE E ++ D++S GV
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 546 LLLEVLTGRAP 556
++ +L G P
Sbjct: 218 IMYTLLAGSPP 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE---- 128
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 30/231 (12%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDA-NPCARKEFEQYM 403
E+ F EDL +G+G+ G+V K V G I+AVKR++ + +K+ +
Sbjct: 14 EQHWDFTAEDLKDLGE--IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 404 DVIGKLKH-PNVVKLRAYYYAKEEKLLVYDYLPNG------SLHSLLHGNRGPGRIPLDW 456
DV+ + P +V+ + + + + + + ++S+L IP +
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDD-----VIPEEI 126
Query: 457 TTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA 516
+I+L + L + + K+ H ++K SN+LLD++G + DFG+S L A
Sbjct: 127 LGKITL--ATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181
Query: 517 IARLGG---YKAPEQAEVKRLSQ----KADVYSFGVLLLEVLTGRAPSQYP 560
R G Y APE+ + Q ++DV+S G+ L E+ TGR P YP
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP--YP 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 359 ASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ E+LG G G V+K G+ +A K +K ++E + + V+ +L H N+++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ +K + +LV +Y+ G L + + LD I + G+ +HQ Y
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELD---TILFMKQICEGIRHMHQMY 207
Query: 478 GTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+L D + I DFGL+ P + + G + APE
Sbjct: 208 ----ILHLDLKPENILCVNRDAKQIKII-DFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+S D++S GV+ +L+G +P
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V A G VAVK++ R+ + ++ H NVV + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKV 482
+E +V ++L G+L ++ R ++ ++ L R L+ +H + V
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSYLHNQ----GV 162
Query: 483 PHGNVKSSNVLLDKNGVACISDFGLSLLLNP-VQAIARLGG---YKAPEQAEVKRLSQKA 538
H ++KS ++LL +G +SDFG ++ V L G + APE +
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 539 DVYSFGVLLLEVLTGRAP 556
D++S G++++E++ G P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVL-DDGGIVAVKRLK-DANPCARKEFEQYMD 404
++ Q E+ DL +G G+ G V+K G ++AVK+++ N K +D
Sbjct: 18 QRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD 75
Query: 405 VIGKLKH-PNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
V+ K P +V+ + + + + + G+ L R G IP ++++
Sbjct: 76 VVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLK-KRMQGPIPERILGKMTVA 132
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG- 522
+ + L + +++G V H +VK SN+LLD+ G + DFG+S L +A R G
Sbjct: 133 I--VKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC 187
Query: 523 --YKAPEQAEVKRLSQ-----KADVYSFGVLLLEVLTGRAP 556
Y APE+ + ++ +ADV+S G+ L+E+ TG+ P
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-IVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E LG G G V + + D G VA+K+ + + +P R+ + + ++ KL HPNVV R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 420 Y------YYAKEEKLLVYDYLPNGSLHSLLHG-------NRGPGRIPLDWTTRISLVLGA 466
+ LL +Y G L L+ GP R +L+
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR---------TLLSDI 131
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG- 522
+ L +H+ ++ H ++K N++L + + I D G + L+ + G
Sbjct: 132 SSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 187
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE E K+ + D +SFG L E +TG P
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-IVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E LG G G V + + D G VA+K+ + + +P R+ + + ++ KL HPNVV R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 420 Y------YYAKEEKLLVYDYLPNGSLHSLLHG-------NRGPGRIPLDWTTRISLVLGA 466
+ LL +Y G L L+ GP R +L+
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR---------TLLSDI 130
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG- 522
+ L +H+ ++ H ++K N++L + + I D G + L+ + G
Sbjct: 131 SSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE E K+ + D +SFG L E +TG P
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKL--R 418
+G GS G K G + V + D E + + +++ +LKHPN+V+ R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+V +Y G L S++ G + + ++ R+ L A L H+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 478 -GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR--LGG--YKAPEQAEVK 532
G V H ++K +NV LD + DFGL+ +LN + A+ +G Y +PEQ
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 533 RLSQKADVYSFGVLLLEV 550
++K+D++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCAR----KEFEQYMDVIGKLKHPNVVKLR 418
+LGKGS VY+A G+ ++ D + + + + + +LKHP++++L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
Y+ LV + NG ++ L NR P + G+ +H
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-KNRVK---PFSENEARHFMHQIITGMLYLH---- 129
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGG---YKAPEQAEVKRL 534
+ + H ++ SN+LL +N I+DFGL+ L P + L G Y +PE A
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 535 SQKADVYSFGVLLLEVLTGRAP 556
++DV+S G + +L GR P
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPP 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKL--R 418
+G GS G K G + V + D E + + +++ +LKHPN+V+ R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+V +Y G L S++ G + + ++ R+ L A L H+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 478 -GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR--LGG--YKAPEQAEVK 532
G V H ++K +NV LD + DFGL+ +LN + A+ +G Y +PEQ
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 533 RLSQKADVYSFGVLLLEV 550
++K+D++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKL--R 418
+G GS G K G + V + D E + + +++ +LKHPN+V+ R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+V +Y G L S++ G + + ++ R+ L A L H+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 478 -GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR--LGG--YKAPEQAEVK 532
G V H ++K +NV LD + DFGL+ +LN + A+ +G Y +PEQ
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 533 RLSQKADVYSFGVLLLEV 550
++K+D++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
E++G G G V+KA DG ++R+K N A +E + + KL H N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 73
Query: 421 Y-------YAKEEKLLVYDYLP----------------------NGSLHSLLHGNRGPGR 451
+ ++ L DY P G+L + RG
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-- 131
Query: 452 IPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL 511
LD + L +G+ IH + K+ H ++K SN+ L I DFGL L
Sbjct: 132 -KLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 512 NPVQAIARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVL 551
R G Y +PEQ + ++ D+Y+ G++L E+L
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 356 LLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKE--FEQYMDVIGKLKHPN 413
LL S +G+GS G V A G ++ D R+E F + + ++ +H N
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV-IMRDYQHFN 103
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VV++ Y EE ++ ++L G+L ++ ++ L+ ++ + LA +
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIV------SQVRLNEEQIATVCEAVLQALAYL 157
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-VQAIARLGG---YKAPEQA 529
H + V H ++KS ++LL +G +SDFG ++ V L G + APE
Sbjct: 158 HAQ----GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI 213
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
+ + D++S G++++E++ G P SP +
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 248
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 346 ERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCA------RKE 398
E KQ ++ED E LG G V K G+ A K +K A R+E
Sbjct: 3 ETFKQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE 61
Query: 399 FEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTT 458
E+ + ++ ++ HPN++ L Y + + +L+ + + G L L + L
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEE 116
Query: 459 RISLVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNP 513
S + G+ +H T K+ H ++K N+ LLDKN + I DFGL+ +
Sbjct: 117 ATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLI-DFGLAHEIED 171
Query: 514 VQAIARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV-S 154
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL 214
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 254
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 128
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ + R++F Q + + HP++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE---- 508
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 368 SLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLK---HPNVVKLRAYYYAK 424
++ + K+ D G R D N K E+ + I LK HPN++KL + K
Sbjct: 65 AIKVIKKSQFDKG------RYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDK 118
Query: 425 EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPH 484
+ LV ++ G L + R D +++ G+ +H+ + H
Sbjct: 119 KYFYLVTEFYEGGELFEQI-----INRHKFDECDAANIMKQILSGICYLHKH----NIVH 169
Query: 485 GNVKSSNVLLD-KNGVACIS--DFGLSLLLNPVQAI-ARLGG--YKAPEQAEVKRLSQKA 538
++K N+LL+ KN + I DFGLS + + RLG Y APE + K+ ++K
Sbjct: 170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKC 228
Query: 539 DVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
DV+S GV++ +L G P Q +V++ + D W
Sbjct: 229 DVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 80 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 130
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 191 FTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 106 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 156
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 217 FTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 81 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 131
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 192 FTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 75 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 125
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 128
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 83 GVI-TENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ N + DFGLS + G + APE +R
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 194 FTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-S 143
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 243
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-S 147
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 247
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQ-------YMDVIGKLKHPNVV 415
++G+G G VY D G + + D K+ E + ++ P +V
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ ++ + D + G LH L HG + + I L GL +
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL------GLEHM 307
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAPE--QA 529
H + V + ++K +N+LLD++G ISD GL+ + + A +G GY APE Q
Sbjct: 308 HNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 363
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAP-SQYPSPTRPRVDEE--EQAVDLP 577
V S AD +S G +L ++L G +P Q+ + + +D AV+LP
Sbjct: 364 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 413
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV-S 139
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 140 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 199
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 239
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 118/293 (40%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H ++ + N ++ + I DFG++ + A R GG +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-AYYRKGGKGLLPVRWM 199
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 242
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P+ RPT E+ +++D
Sbjct: 243 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQ-------YMDVIGKLKHPNVV 415
++G+G G VY D G + + D K+ E + ++ P +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ ++ + D + G LH L HG + + I L GL +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL------GLEHM 308
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAPE--QA 529
H + V + ++K +N+LLD++G ISD GL+ + + A +G GY APE Q
Sbjct: 309 HNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAP-SQYPSPTRPRVDEE--EQAVDLP 577
V S AD +S G +L ++L G +P Q+ + + +D AV+LP
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQ-------YMDVIGKLKHPNVV 415
++G+G G VY D G + + D K+ E + ++ P +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ ++ + D + G LH L HG + + I L GL +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL------GLEHM 308
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAPE--QA 529
H + V + ++K +N+LLD++G ISD GL+ + + A +G GY APE Q
Sbjct: 309 HNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAP-SQYPSPTRPRVDEE--EQAVDLP 577
V S AD +S G +L ++L G +P Q+ + + +D AV+LP
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQ-------YMDVIGKLKHPNVV 415
++G+G G VY D G + + D K+ E + ++ P +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ ++ + D + G LH L HG + + I L GL +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL------GLEHM 308
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG--GYKAPE--QA 529
H + V + ++K +N+LLD++G ISD GL+ + + A +G GY APE Q
Sbjct: 309 HNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAP-SQYPSPTRPRVDEE--EQAVDLP 577
V S AD +S G +L ++L G +P Q+ + + +D AV+LP
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKA--VLDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+GKG+ V A VL G VAVK + NP + ++ + + ++ L HPN+VKL
Sbjct: 23 IGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
++ LV +Y G + L HG + +S V HQ+Y
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV-------QYCHQKY 134
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRL 534
+ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 135 ----IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 535 SQ-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-S 154
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 254
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-S 146
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 246
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 137
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 138 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L R PG P + + LV
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV-S 154
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 254
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H N+ + N ++ + I DFG++ + R GG +
Sbjct: 146 YLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 200
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 243
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P RPT E+ +++D
Sbjct: 244 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 289
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 134
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 135 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H N+ + N ++ + I DFG++ + R GG +
Sbjct: 145 YLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 199
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 242
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P RPT E+ +++D
Sbjct: 243 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 134
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 135 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H ++ + N ++ + I DFG++ + R GG +
Sbjct: 142 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 196
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 239
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P+ RPT E+ +++D
Sbjct: 240 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 285
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 383 VAVKRLK-DANPCARKEFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLH 440
VAVK LK DA + M+++ + KH N++ L ++ +Y G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 441 SLLHGNRGPG--------RIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNV 492
L R PG P + + LV A +AR + + K H ++ + NV
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNV 222
Query: 493 LLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPEQAEVKRLSQKADVYSFGVL 546
L+ ++ V I+DFGL+ ++ + + + APE + + ++DV+SFGVL
Sbjct: 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 282
Query: 547 LLEVLT-GRAPSQYP 560
L E+ T G +P YP
Sbjct: 283 LWEIFTLGGSP--YP 295
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 87 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 139
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 140 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H ++ + N ++ + I DFG++ + R GG +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 199
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 242
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P+ RPT E+ +++D
Sbjct: 243 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 158
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 159 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 141 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 363 MLGKGSLGTVYKAVLDDGG----IVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVV 415
+LG+G G VY+ V + VAVK K C E++M ++ L HP++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
KL +E ++ + P G L L N+ ++ T + L + +A +
Sbjct: 73 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLE- 126
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLG-GYKAPEQAE 530
+ H ++ N+L+ + DFGLS + ++ RL + +PE
Sbjct: 127 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 531 VKRLSQKADVYSFGVLLLEVLT-GRAP 556
+R + +DV+ F V + E+L+ G+ P
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 363 MLGKGSLGTVYKAVLDDGG----IVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVV 415
+LG+G G VY+ V + VAVK K C E++M ++ L HP++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
KL +E ++ + P G L L N+ ++ T + L + +A +
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLE- 142
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLG-GYKAPEQAE 530
+ H ++ N+L+ + DFGLS + ++ RL + +PE
Sbjct: 143 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 531 VKRLSQKADVYSFGVLLLEVLT-GRAP 556
+R + +DV+ F V + E+L+ G+ P
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
++ K+ VV L Y K+ LV + G L ++ + G P V
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP-----EARAVF 290
Query: 465 GAAR---GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI-ARL 520
AA GL +H+E ++ + ++K N+LLD +G ISD GL++ + Q I R+
Sbjct: 291 YAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 346
Query: 521 G--GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
G GY APE + +R + D ++ G LL E++ G++P Q R + E ++P+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 136
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 137 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 143
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 144 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 127
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 128 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 116/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H ++ + N ++ + I DFG++ + R GG +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 199
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 242
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P RPT E+ +++D
Sbjct: 243 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 363 MLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
M G+G+ GTV G+ VA+K++ +P R Q M + L HPN+V+L++Y+
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-DPRFRNRELQIMQDLAVLHHPNIVQLQSYF 88
Query: 422 YAKEEK-------LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
Y E+ +V +Y+P+ +LH P ++ L R + +H
Sbjct: 89 YTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL-FQLIRSIGCLH 146
Query: 475 QEYGTAKVPHGNVKSSNVLLDK-NGVACISDFGLSLLLNPVQA-IARLGG--YKAPEQAE 530
+ V H ++K NVL+++ +G + DFG + L+P + +A + Y+APE
Sbjct: 147 --LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIF 204
Query: 531 -VKRLSQKADVYSFGVLLLEVLTG 553
+ + D++S G + E++ G
Sbjct: 205 GNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 46/262 (17%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGK--LKHPNVVKLR 418
E+ +G G V+KA +++D V + L+D ++ ++ ++ +KH N+++
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD-----KQSWQSEREIFSTPGMKHENLLQFI 75
Query: 419 AYYY----AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
A + E L+ + GSL L GN + W + +RGL+ +H
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLH 129
Query: 475 QEYGTAK-------VPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG----- 522
++ + + H + KS NVLL + A ++DFGL++ P + G
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 523 -YKAPEQAEVKRLSQ-----KADVYSFGVLLLEVLT----GRAP-SQYPSPTRPRVD--- 568
Y APE E Q + D+Y+ G++L E+++ P +Y P +
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHP 249
Query: 569 --EEEQAVDLPKWVRSVVKEEW 588
EE Q V + K +R +K+ W
Sbjct: 250 SLEELQEVVVHKKMRPTIKDHW 271
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 363 MLGKGSLGTVYKAVLDDGG----IVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVV 415
+LG+G G VY+ V + VAVK K C E++M ++ L HP++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
KL +E ++ + P G L L N+ ++ T + L + +A +
Sbjct: 77 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLE- 130
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLG-GYKAPEQAE 530
+ H ++ N+L+ + DFGLS + ++ RL + +PE
Sbjct: 131 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 531 VKRLSQKADVYSFGVLLLEVLT-GRAP 556
+R + +DV+ F V + E+L+ G+ P
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
++ K+ VV L Y K+ LV + G L ++ + G P V
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP-----EARAVF 290
Query: 465 GAAR---GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI-ARL 520
AA GL +H+E ++ + ++K N+LLD +G ISD GL++ + Q I R+
Sbjct: 291 YAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 346
Query: 521 G--GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
G GY APE + +R + D ++ G LL E++ G++P Q R + E ++P+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCA 395
K V+ +RK LL + LG G+ GTV Y + VAVK LK+ +P
Sbjct: 19 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI- 129
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 130 ----IELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCA 395
K V+ +RK LL + LG G+ GTV Y + VAVK LK+ +P
Sbjct: 19 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI- 129
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 130 ----IELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKDANP-CARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ R++F Q + + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE---- 128
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ + DFGLS + G + APE +R
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCARKEFEQYMDV 405
EDL+ E LG+G+ ++K V + G V +K L A+ + F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 406 IGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
+ KL H ++V + +E +LV +++ GSL + L N+ I L
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN--------CINILWKLE 117
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLL-----DKNG---VACISDFGLSLLLNPVQAI 517
A+ LA + HGNV + N+LL K G +SD G+S+ + P +
Sbjct: 118 VAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 518 ARLGGYKAPEQAEV-KRLSQKADVYSFGVLLLEVLTG 553
+ PE E K L+ D +SFG L E+ +G
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLD-----DGGIVAVKRLKDANPCA 395
K V+ +RK LL + LG G+ GTV K V + + + +P
Sbjct: 361 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 413
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRH-----VK 467
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 468 DKNIIELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLD-----DGGIVAVKRLKDANPCA 395
K V+ +RK LL + LG G+ GTV K V + + + +P
Sbjct: 362 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 414
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRH-----VK 468
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 469 DKNIIELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 525 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 363 MLGKGSLGTVYKAVLDDGG-IVAVKRL--KDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
++G+GS G V K D G IVA+K+ D + +K + + ++ +L+H N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
K+ LV++++ + L L G LD+ + G+ H +
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCH----S 142
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI----ARLGGYKAPEQ--AEVKR 533
+ H ++K N+L+ ++GV + DFG + L + Y+APE +VK
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK- 201
Query: 534 LSQKADVYSFGVLLLEVLTG 553
+ DV++ G L+ E+ G
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 362 EMLGKGSLGTVY--KAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
E+LG G+ V+ K L G + A+K +K + E + V+ K+KH N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
Y + LV + G L + RG D + I VL A + L E G
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRI-LERGV-YTEKDASLVIQQVLSAVKYL----HENG- 126
Query: 480 AKVPHGNVKSSNVLL---DKNGVACISDFGLSLL-LNPVQAIA-RLGGYKAPEQAEVKRL 534
+ H ++K N+L ++N I+DFGLS + N + + A GY APE K
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 535 SQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
S+ D +S GV+ +L G P + S ++ E + P W
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFW 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A G+ +
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYL 130
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 131 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLL---NPVQAIARLGGYKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ + N + I + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCA 395
K V+ +RK LL + LG G+ GTV Y + VAVK LK+ +P
Sbjct: 17 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 69
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI- 127
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 128 ----IELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 363 MLGKGSLGTVYKA----VLDDGGIVAVKRL----KDANPCARKEFEQYMDVIGKLKHPNV 414
MLGKGS G V K + + + + KD + R+ ++++ KL HPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-----VELLKKLDHPNI 83
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+KL +V + G L + + R RI + G+ +H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARI--IKQVFSGITYMH 138
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVAC---ISDFGLSLLLNPVQAIA-RLGG--YKAPEQ 528
+ + H ++K N+LL+ C I DFGLS + R+G Y APE
Sbjct: 139 KH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE- 193
Query: 529 AEVKR--LSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
V R +K DV+S GV+L +L+G P + RV+ + A DLP+W
Sbjct: 194 --VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 364 LGKGSLGTVYKAVL----DDGGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G+G G V++ + + VA+K K+ + R++F Q + + HP++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ ++ + G L S L + LD + I + LA +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE---- 508
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-----YKAPEQAEVKR 533
+ + H ++ + NVL+ + DFGLS + G + APE +R
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 534 LSQKADVYSFGVLLLEVLT-GRAPSQ 558
+ +DV+ FGV + E+L G P Q
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 382 IVAVKRL-KDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLH 440
+VA+K + K+A E + V+ K+KHPN+V L Y + L+ + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 441 SLL-----HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVL-- 493
+ + R R+ I VL A + L + + H ++K N+L
Sbjct: 105 DRIVEKGFYTERDASRL-------IFQVLDAVKYLHDL-------GIVHRDLKPENLLYY 150
Query: 494 -LDKNGVACISDFGLSLLLNPVQAIARLG---GYKAPEQAEVKRLSQKADVYSFGVLLLE 549
LD++ ISDFGLS + +P ++ GY APE K S+ D +S GV+
Sbjct: 151 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 550 VLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
+L G P + + ++ + E D P W
Sbjct: 211 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 386 KRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHG 445
++L++ R+E V G HP+++ L Y + LV+D + G L L
Sbjct: 137 EQLEEVREATRRETHILRQVAG---HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-- 191
Query: 446 NRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDF 505
++ L S++ ++ +H + H ++K N+LLD N +SDF
Sbjct: 192 ---TEKVALSEKETRSIMRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRLSDF 244
Query: 506 GLSLLLNPVQAIARLG---GYKAPEQAEVKR------LSQKADVYSFGVLLLEVLTGRAP 556
G S L P + + L GY APE + ++ D+++ GV+L +L G P
Sbjct: 245 GFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 453 PLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN 512
P+ IS ARG+ + + K H ++ + N+LL +N V I DFGL+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFL----SSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 513 PVQAIARLGG------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRP 565
R G + APE K S K+DV+S+GVLL E+ + G +P YP
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP--YPGVQM- 307
Query: 566 RVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKR 625
+E+ L + +R E T E++ + L C P++R
Sbjct: 308 ---DEDFCSRLREGMRMRAPEYSTPEIY------------------QIMLDCWHRDPKER 346
Query: 626 PTMAEVAKMIEDI 638
P AE+ + + D+
Sbjct: 347 PRFAELVEKLGDL 359
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H ++ + N ++ + I DFG++ + R GG +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 199
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 242
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P+ RPT E+ +++D
Sbjct: 243 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINAMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 364 LGKGSLGTVYKAVLDD------GGIVAVKRLKD-ANPCARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY+ D VAVK + + A+ R EF V+ +VV+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L+V + + +G L S L R PGR P I + A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ + K H ++ + N ++ + I DFG++ + R GG +
Sbjct: 144 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 198
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVV 584
APE + + +D++SFGV+L E+ T A Y + V+
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSN----------------EQVL 241
Query: 585 KEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIED 637
K DQ N E + ++ + C P+ RPT E+ +++D
Sbjct: 242 KFVMDGGYLDQP----DNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 287
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCA 395
K V+ +RK LL + LG G+ GTV Y + VAVK LK+ +P
Sbjct: 9 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 61
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI- 119
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 120 ----IELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCA 395
K V+ +RK LL + LG G+ GTV Y + VAVK LK+ +P
Sbjct: 3 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 55
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI- 113
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 114 ----IELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDG---GIVAVKRL-KDANPCARKEFEQYMDVIGKLKHPNVVKL 417
++LG G+ V A +D +VA+K + K+A E + V+ K+KHPN+V L
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL-----HGNRGPGRIPLDWTTRISLVLGAARGLAR 472
Y + L+ + G L + + R R+ I VL A + L
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-------IFQVLDAVKYLHD 134
Query: 473 IHQEYGTAKVPHGNVKSSNVL---LDKNGVACISDFGLSLLLNPVQAIARLG---GYKAP 526
+ + H ++K N+L LD++ ISDFGLS + +P ++ GY AP
Sbjct: 135 L-------GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
E K S+ D +S GV+ +L G P + + ++ + E D P W
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 356 LLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLK 410
LL + LG G+ GTV Y + VAVK LK+ +P + E +V+ +L
Sbjct: 5 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 64
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGL 470
+P +V++ A E +LV + G L+ L NR + I LV + G+
Sbjct: 65 NPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 118
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI--ARLGG-----Y 523
+ + + H ++ + NVLL A ISDFGLS L + A+ G +
Sbjct: 119 KYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 174
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 175 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCA 395
K V+ +RK LL + LG G+ GTV Y + VAVK LK+ +P
Sbjct: 3 KEVYLDRK-------LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 55
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD 455
+ E +V+ +L +P +V++ A E +LV + G L+ L NR +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI- 113
Query: 456 WTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ 515
I LV + G+ + + + H ++ + NVLL A ISDFGLS L +
Sbjct: 114 ----IELVHQVSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 516 AI--ARLGG-----YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
A+ G + APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 128
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 362 EMLGKGSLGTVYKAVLDDG---GIVAVKRL-KDANPCARKEFEQYMDVIGKLKHPNVVKL 417
++LG G+ V A +D +VA+K + K+A E + V+ K+KHPN+V L
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL-----HGNRGPGRIPLDWTTRISLVLGAARGLAR 472
Y + L+ + G L + + R R+ I VL A + L
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-------IFQVLDAVKYLHD 134
Query: 473 IHQEYGTAKVPHGNVKSSNVL---LDKNGVACISDFGLSLLLNPVQAIARLG---GYKAP 526
+ + H ++K N+L LD++ ISDFGLS + +P ++ GY AP
Sbjct: 135 L-------GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
E K S+ D +S GV+ +L G P + + ++ + E D P W
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 128
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 356 LLRASAEMLGKGSLGTV---YKAVLDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLK 410
LL + LG G+ GTV Y + VAVK LK+ +P + E +V+ +L
Sbjct: 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGL 470
+P +V++ A E +LV + G L+ L NR + I LV + G+
Sbjct: 67 NPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 120
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAI--ARLGG-----Y 523
+ + + H ++ + NVLL A ISDFGLS L + A+ G +
Sbjct: 121 KYLEE----SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 176
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
APE + S K+DV+SFGVL+ E + G+ P
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 364 LGKGSLGTVYKAV---LDDG-----GIVAVKRLK-DANPCARKEFEQYMDVIGKL-KHPN 413
LG+G+ G V A LD VAVK LK DA + M+++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG--------RIPLDWTTRISLVLG 465
++ L ++ +Y G+L L PG P + + LV
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV-S 154
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG--- 522
A +AR + + K H ++ + NVL+ ++ V I+DFGL+ ++ + +
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYP 560
+ APE + + ++DV+SFGVLL E+ T G +P YP
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YP 254
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 31/233 (13%)
Query: 363 MLGKGSLGTVYKA----VLDDGGIVAVKRL----KDANPCARKEFEQYMDVIGKLKHPNV 414
MLGKGS G V K + + + + KD + R+ ++++ KL HPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-----VELLKKLDHPNI 83
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+KL +V + G L + + R RI + G+ +H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARI--IKQVFSGITYMH 138
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVAC---ISDFGLSLLLNPVQAIA-RLGG--YKAPEQ 528
+ + H ++K N+LL+ C I DFGLS + R+G Y APE
Sbjct: 139 KH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P + RV+ + A DLP+W
Sbjct: 195 LR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 68
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 120
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 121 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 229
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 230 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 259
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 53/275 (19%)
Query: 361 AEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLK--------- 410
+ LG G+ G V + G VAVK L R++ +DV+GK++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILN------RQKIRS-LDVVGKIRREIQNLKLF 73
Query: 411 -HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
HP+++KL + +V +Y+ G L + N GR LD L G
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN---GR--LDEKESRRLFQQILSG 128
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAP 526
+ H+ V H ++K NVLLD + A I+DFGLS +++ + + G Y AP
Sbjct: 129 VDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
Query: 527 EQAEVKRLS-QKADVYSFGVLLLEVLTGRAP--------------------SQYPSPTRP 565
E + + + D++S GV+L +L G P QY +P+
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVI 244
Query: 566 RVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
+ + VD K R+ +K+ E F Q+L +Y
Sbjct: 245 SLLKHMLQVDPMK--RATIKDIREHEWFKQDLPKY 277
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L + L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRV-DEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 21/228 (9%)
Query: 363 MLGKGSLGTVYKA---VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
MLGKGS G V K + V V A + ++++ KL HPN++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+V + G L + + R RI + G+ +H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARI--IKQVFSGITYMHKH--- 140
Query: 480 AKVPHGNVKSSNVLLDKNGVAC---ISDFGLSLLLNPVQAIA-RLGG--YKAPEQAEVKR 533
+ H ++K N+LL+ C I DFGLS + R+G Y APE
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GT 198
Query: 534 LSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P + RV+ + A DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 70
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 122
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 231
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 232 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 261
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 36 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNRG---PGRIPLD-WTTRISL--VLGA 466
VV L L+V ++ G+L + L R P + P D + ++L ++
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---- 522
+ +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWV 580
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FC 261
Query: 581 RSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 262 RRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCA------RKEFEQ 401
KQ ++ED E LG G V K G+ A K +K A R+E E+
Sbjct: 6 KQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
+ ++ ++ H NV+ L Y + + +L+ + + G L L + L S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATS 119
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQA 516
+ G+ +H T K+ H ++K N+ LLDKN + I DFGL+ +
Sbjct: 120 FIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLI-DFGLAHEIEDGVE 174
Query: 517 IARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCA------RKEFEQ 401
KQ ++ED E LG G V K G+ A K +K A R+E E+
Sbjct: 6 KQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
+ ++ ++ H NV+ L Y + + +L+ + + G L L + L S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATS 119
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQA 516
+ G+ +H T K+ H ++K N+ LLDKN + I DFGL+ +
Sbjct: 120 FIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLI-DFGLAHEIEDGVE 174
Query: 517 IARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCA------RKEFEQ 401
KQ ++ED E LG G V K G+ A K +K A R+E E+
Sbjct: 6 KQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
+ ++ ++ H NV+ L Y + + +L+ + + G L L L S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATS 119
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQA 516
+ G+ +H T K+ H ++K N+ LLDKN + I DFGL+ +
Sbjct: 120 FIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLI-DFGLAHEIEDGVE 174
Query: 517 IARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCA------RKEFEQ 401
KQ ++ED E LG G V K G+ A K +K A R+E E+
Sbjct: 6 KQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
+ ++ ++ H NV+ L Y + + +L+ + + G L L + L S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATS 119
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQA 516
+ G+ +H T K+ H ++K N+ LLDKN + I DFGL+ +
Sbjct: 120 FIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLI-DFGLAHEIEDGVE 174
Query: 517 IARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCA------RKEFEQ 401
KQ ++ED E LG G V K G+ A K +K A R+E E+
Sbjct: 6 KQQKVEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
+ ++ ++ H NV+ L Y + + +L+ + + G L L + L S
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATS 119
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQA 516
+ G+ +H T K+ H ++K N+ LLDKN + I DFGL+ +
Sbjct: 120 FIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLI-DFGLAHEIEDGVE 174
Query: 517 IARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++L G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 141 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFG + LL + G K P E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+ L++A +P A KE V+ + +P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 167
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 168 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKR--LKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
E +G+G+ GTV+KA + IVA+KR L D + + + ++ +LKH N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ ++ LV+++ + L G LD S + +GL H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCH---- 118
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPEQAEVKRL 534
+ V H ++K N+L+++NG ++DFGL+ PV+ + Y+ P+ +L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 535 -SQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEW 588
S D++S G + E+ + P P D ++Q + + + + +E+W
Sbjct: 179 YSTSIDMWSAGCIFAEL------ANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 45/284 (15%)
Query: 361 AEMLGKGSLGTVYKAV---LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ LG+G+ G V AV ++ V + +K A C + ++ + + L H NVVK
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKF 69
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + L +Y G L + + G +P R L A G+ +H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLH--- 121
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLGG---YKAPEQAEV 531
+ H ++K N+LLD+ ISDFGL+ + N + + ++ G Y APE +
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 532 KRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPT-RPRVDEEEQAVDLPKWVRSVVKEEWT 589
+ ++ DV+S G++L +L G P PS + + D +E+ L W
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW---------- 230
Query: 590 AEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAK 633
K I+ +++LH +V P R T+ ++ K
Sbjct: 231 -----------KKIDSAPLALLH---KILVENPSARITIPDIKK 260
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 137
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFG + LL + G K P E
Sbjct: 138 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 382 IVAVKRL-KDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLH 440
+VA+K + K A E + V+ K+KHPN+V L Y + L+ + G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 441 SLL-----HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVL-- 493
+ + R R+ I VL A + L + + H ++K N+L
Sbjct: 105 DRIVEKGFYTERDASRL-------IFQVLDAVKYLHDL-------GIVHRDLKPENLLYY 150
Query: 494 -LDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLE 549
LD++ ISDFGLS + +P ++ G Y APE K S+ D +S GV+
Sbjct: 151 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 550 VLTGRAP--SQYPSPTRPRVDEEEQAVDLPKW 579
+L G P + + ++ + E D P W
Sbjct: 211 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L++ +P G L + H + + L+W +I A+G+ +
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFG + LL + G K P E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 153 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 259
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 260 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++L G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 141 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 37 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNRG------PGRIPLDWTTRISLVLGA 466
VV L L+V ++ G+L + L R P + D+ T L+ +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 467 ARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---- 522
+ +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 155 FQ-VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 523 --YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWV 580
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FC 261
Query: 581 RSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 262 RRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKNG---VACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-----VAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++L G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFGL+ LL + G K P E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 144 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 250
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 251 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 354 EDLLRASAEMLGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCARKEFEQYMDV 405
EDL+ E LG+G+ ++K V + G V +K L A+ + F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 406 IGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
+ KL H ++V +E +LV +++ GSL + L N+ I + W ++ L
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQLA 123
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLL-----DKNG---VACISDFGLSLLLNPVQAI 517
AA + HGNV + N+LL K G +SD G+S+ + P +
Sbjct: 124 AAMHFLE------ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 518 ARLGGYKAPEQAEV-KRLSQKADVYSFGVLLLEVLTG 553
+ PE E K L+ D +SFG L E+ +G
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 144 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 250
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 251 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VAVK + N + ++ + + ++ L HPN+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ LV +Y G + L HG + +S V HQ++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV-------QYCHQKF- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLS---LLLNPVQAIARLGGYKAPEQAEVKRLS 535
+ H ++K+ N+LLD + I+DFG S N + A Y APE + K+
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 536 Q-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLP 212
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFG + LL + G K P E
Sbjct: 134 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 364 LGKGSLGTVYKAVLDDGGIVA-VKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
L + G ++K IV V +++D + ++F + + HPNV+ +
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 423 A--KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ L+ ++P GSL+++LH G + +D + + L ARG+A +H
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLH--EGTNFV-VDQSQAVKFALDMARGMAFLHTL--EP 132
Query: 481 KVPHGNVKSSNVLLDKNGVACIS--DFGLSLLLNPVQAIARL--GGYKAPEQAEVK---R 533
+P + S +V++D++ A IS D S Q+ R+ + APE + K
Sbjct: 133 LIPRHALNSRSVMIDEDMTARISMADVKFSF-----QSPGRMYAPAWVAPEALQKKPEDT 187
Query: 534 LSQKADVYSFGVLLLEVLTGRAP 556
+ AD++SF VLL E++T P
Sbjct: 188 NRRSADMWSFAVLLWELVTREVP 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 140
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFG + LL + G K P E
Sbjct: 141 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-----IVAVKRLKDA-NPCARKEFEQYMDVIGKLKHPNVV 415
++LG G+ GTVYK + G VA+K L++A +P A KE V+ + +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+L +L+ +P G L + H + + L+W +I A+G+ +
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYKAP------E 527
++ H ++ + NVL+ I+DFG + LL + G K P E
Sbjct: 136 EDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT 552
+ + ++DV+S+GV + E++T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI------VAVKRLKDANP-CARKEFEQYMDVIGKLKHP 412
+ E LG G V K G+ + +R K + +R++ E+ + ++ +++HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ L Y K + +L+ + + G L L L + G+
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 473 IHQEYGTAKVPHGNVKSSNV-LLDKN---GVACISDFGLSLLLNPVQAIARLGG---YKA 525
+H + ++ H ++K N+ LLD+N I DFGL+ ++ + G + A
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 37 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 155 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 261
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 262 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 28/257 (10%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDV 405
++ Q ED +++G+G+ G V + + I A+K L R E + +
Sbjct: 83 KEMQLHREDF--EIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 140
Query: 406 IGKLKHPNVVKLRAYYYAKEEK---LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
L + + + A +YA +++ LV DY G L +LL ++ ++P D
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMA---RF 195
Query: 463 VLG-AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN---PVQAIA 518
+G + IHQ + H ++K NVLLD NG ++DFG L +N VQ+
Sbjct: 196 YIGEMVLAIDSIHQLHYV----HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 519 RLG--GYKAPEQAE-----VKRLSQKADVYSFGVLLLEVLTGRAPSQYPS--PTRPRVDE 569
+G Y +PE + + + + D +S GV + E+L G P S T ++
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Query: 570 EEQAVDLPKWVRSVVKE 586
E+ P V V +E
Sbjct: 312 HEERFQFPSHVTDVSEE 328
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 28/257 (10%)
Query: 347 RKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDV 405
++ Q ED +++G+G+ G V + + I A+K L R E + +
Sbjct: 67 KEMQLHREDF--EIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 124
Query: 406 IGKLKHPNVVKLRAYYYAKEEK---LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
L + + + A +YA +++ LV DY G L +LL ++ ++P D
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMA---RF 179
Query: 463 VLG-AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN---PVQAIA 518
+G + IHQ + H ++K NVLLD NG ++DFG L +N VQ+
Sbjct: 180 YIGEMVLAIDSIHQLHYV----HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 519 RLG--GYKAPEQAE-----VKRLSQKADVYSFGVLLLEVLTGRAPSQYPS--PTRPRVDE 569
+G Y +PE + + + + D +S GV + E+L G P S T ++
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 570 EEQAVDLPKWVRSVVKE 586
E+ P V V +E
Sbjct: 296 HEERFQFPSHVTDVSEE 312
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 153 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 259
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 260 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 153 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 259
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 260 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 353 LEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKD-----ANPCARKEFEQYMDVIG 407
+EDL +G+G+ G VYKA DG LK + A +E + ++
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE----IALLR 73
Query: 408 KLKHPNVVKLRAYY--YAKEEKLLVYDYLPNGSLHSL-LH----GNRGPGRIPLDWTTRI 460
+LKHPNV+ L+ + +A + L++DY + H + H N+ P ++P
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK-- 131
Query: 461 SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLL----DKNGVACISDFGLSLLLN-PVQ 515
SL+ G+ +H + V H ++K +N+L+ + G I+D G + L N P++
Sbjct: 132 SLLYQILDGIHYLHANW----VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 516 AIARLG------GYKAPEQAEVKRLSQKA-DVYSFGVLLLEVLT 552
+A L Y+APE R KA D+++ G + E+LT
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 144 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 250
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 251 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 72 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 190 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 296
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 297 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 201
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 138 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 192
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 51/300 (17%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 26 LGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNR--------GPGRIPLDWTTRISLVL 464
VV L L+V ++ G+L + L R P + D+ T L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
+ + +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 144 YSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 250
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 251 FCRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 26/229 (11%)
Query: 344 FYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKE---F 399
F + KQ L +++G+G+ G V L + + A+K L R E F
Sbjct: 62 FTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACF 121
Query: 400 EQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWT 457
+ DV+ + L + LV DY G L +LL +R P + +
Sbjct: 122 REERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL 181
Query: 458 TRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPV 514
+ + + + L +H++ +K N+L+D NG ++DFG L L V
Sbjct: 182 AEMVIAIDSVHQLHYVHRD----------IKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231
Query: 515 QAIARLG--GYKAPEQAEVK-----RLSQKADVYSFGVLLLEVLTGRAP 556
Q+ +G Y +PE + R + D +S GV + E+L G P
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANP-CARKEFEQ 401
+Q ++ED E LG G V K G + +RL + +R+E E+
Sbjct: 6 RQEDVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRIS 461
++++ +++HPN++ L + K + +L+ + + G L L + D T+
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQ-- 119
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQA 516
+ G+ +H + ++ H ++K N+ LLDKN + I DFG++ +
Sbjct: 120 FLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLI-DFGIAHKIEAGNE 174
Query: 517 IARLGG---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G + APE + L +AD++S GV+ +L+G +P
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANP-CARKEFEQYMDVIGKLKHPN 413
E LG G V K G + +RL + +R+E E+ ++++ +++HPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++ L + K + +L+ + + G L L + D T+ + G+ +
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQ--FLKQILDGVHYL 124
Query: 474 HQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQAIARLGG---YKA 525
H + ++ H ++K N+ LLDKN + I DFG++ + + G + A
Sbjct: 125 H----SKRIAHFDLKPENIMLLDKNVPNPRIKLI-DFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLR 418
+ +GKG+ V A + G VAVK + N + ++ + + + L HPN+VKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ LV +Y G + L HG + +S V HQ+
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAV-------QYCHQK 132
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLS---LLLNPVQAIARLGGYKAPEQAEVKR 533
+ + H ++K+ N+LLD + I+DFG S N + A Y APE + K+
Sbjct: 133 F----IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 534 LSQ-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
V+ +L HPN++KL ++ K LV + G L + + + D + VL
Sbjct: 57 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV--DAAVIMKQVL 114
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIA-RL 520
G +H+ + H ++K N+LL+ ++ + I DFGLS + RL
Sbjct: 115 S---GTTYLHKH----NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 167
Query: 521 GG--YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDL 576
G Y APE K+ +K DV+S GV+L +L G P Q RV++ + + D
Sbjct: 168 GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDP 226
Query: 577 PKWVR 581
P W +
Sbjct: 227 PDWTQ 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VA+K + NP + ++ + + ++ L HPN+VKL
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ L+ +Y G + L HG + +S V HQ+
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV-------QYCHQK-- 130
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
++ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 131 --RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 536 Q-KADVYSFGVLLLEVLTGRAP--SQYPSPTRPRV 567
+ DV+S GV+L +++G P Q R RV
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 223
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VA+K + NP + ++ + + ++ L HPN+VKL
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ L+ +Y G + L HG + +S V HQ+
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV-------QYCHQK-- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPEQAEVK 532
++ H ++K+ N+LLD + I+DFG S N +L Y APE + K
Sbjct: 134 --RIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDAFCGAPPYAAPELFQGK 188
Query: 533 RLSQ-KADVYSFGVLLLEVLTGRAP--SQYPSPTRPRV 567
+ + DV+S GV+L +++G P Q R RV
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 405 VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
V+ +L HPN++KL ++ K LV + G L + + + D + VL
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV--DAAVIMKQVL 131
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIA-RL 520
G +H+ + H ++K N+LL+ ++ + I DFGLS + RL
Sbjct: 132 S---GTTYLHKH----NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 184
Query: 521 GG--YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDL 576
G Y APE K+ +K DV+S GV+L +L G P Q RV++ + + D
Sbjct: 185 GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDP 243
Query: 577 PKWVR 581
P W +
Sbjct: 244 PDWTQ 248
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRL--KDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
LG G+ G V+ G+ V + KD + ++ E ++V+ L HPN++K+ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 422 YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAK 481
+V + G L + + G+ L L+ LA H ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFHSQH---- 144
Query: 482 VPHGNVKSSNVLLDKNGVAC---ISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
V H ++K N+L I DFGL+ L + G Y APE + + ++
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVT 203
Query: 536 QKADVYSFGVLLLEVLTGRAP 556
K D++S GV++ +LTG P
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLP 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 364 LGKGSLGTVYKAV-LDDGG-IVAVKRLK-----DANPCARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA L +GG VA+KR++ + P + + + +HPNVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 417 L----RAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
L +E KL LV++++ + L + L PG +P + T ++ RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTE--TIKDMMFQLLRGLD 134
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG---GYKAPEQ 528
+H + +V H ++K N+L+ +G ++DFGL+ + + A+ + Y+APE
Sbjct: 135 FLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 529 AEVKRLSQKADVYSFGVLLLEVL 551
+ D++S G + E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 99/242 (40%), Gaps = 26/242 (10%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRL-KDANPCARKEFEQYMDV 405
KK FE + E LG G+ V A G + AVK + K A E + V
Sbjct: 21 KKIFEFK-------ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAV 73
Query: 406 IGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
+ K+KH N+V L Y + LV + G L + +G D +T I VL
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKG-FYTEKDASTLIRQVLD 131
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIARLGG 522
A L R+ + H ++K N+L D+ ISDFGLS + ++ G
Sbjct: 132 AVYYLHRM-------GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Query: 523 ---YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP--SQYPSPTRPRVDEEEQAVDLP 577
Y APE K S+ D +S GV+ +L G P + S ++ + E D P
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP 244
Query: 578 KW 579
W
Sbjct: 245 YW 246
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANP-CARKEFEQYMDVIGKLKHPN 413
E LG G V K G + +RL + +R+E E+ ++++ +++HPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
++ L + K + +L+ + + G L L + L + G+ +
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYL 145
Query: 474 HQEYGTAKVPHGNVKSSNV-LLDKN----GVACISDFGLSLLLNPVQAIARLGG---YKA 525
H + ++ H ++K N+ LLDKN + I DFG++ + + G + A
Sbjct: 146 H----SKRIAHFDLKPENIMLLDKNVPNPRIKLI-DFGIAHKIEAGNEFKNIFGTPEFVA 200
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + L +AD++S GV+ +L+G +P
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPC---ARKEFEQYMDVIGKLKHPNVVKL 417
E +G G+ G V A G VA+K++ +A A++ + + ++ KH N++ +
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAI 119
Query: 418 RAYY-----YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ Y + + + V L LH ++H ++ PL + RGL
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKY 174
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLG------GYK 524
+H +A+V H ++K SN+L+++N I DFG++ L +P + + Y+
Sbjct: 175 MH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 525 APE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
APE + +Q D++S G + E+L R
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 25/236 (10%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKR--LKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
E +G+G+ GTV+KA + IVA+KR L D + + + ++ +LKH N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ ++ LV+++ + L G LD S + +GL H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCH---- 118
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIAR---LGGYKAPEQAEVKRL 534
+ V H ++K N+L+++NG +++FGL+ PV+ + Y+ P+ +L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 535 -SQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEW 588
S D++S G + E+ GR P P D ++Q + + + + +E+W
Sbjct: 179 YSTSIDMWSAGCIFAELANAGR-------PLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 153 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 207
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 364 LGKGSLGTVYKAV-LDDGG-IVAVKRLK-----DANPCARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA L +GG VA+KR++ + P + + + +HPNVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 417 L----RAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
L +E KL LV++++ + L + L PG +P + T ++ RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTE--TIKDMMFQLLRGLD 134
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG---GYKAPEQ 528
+H + +V H ++K N+L+ +G ++DFGL+ + + A+ + Y+APE
Sbjct: 135 FLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 529 AEVKRLSQKADVYSFGVLLLEVL 551
+ D++S G + E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 153 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 207
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG+G+ G V K + G I+AVKR++ A ++++ MD+ ++ + +Y
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 423 A--KEEKLLVYDYLPNGSLHSLLHGNRGPGR-IPLDWTTRISLVLGAARGLARIHQEYGT 479
A +E + + L + SL G+ IP D +I++ + + L +H +
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI--VKALEHLHSKLS- 174
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLS-LLLNPVQAIARLGG--YKAPE----QAEVK 532
V H +VK SNVL++ G + DFG+S L++ V G Y APE + K
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
S K+D++S G+ ++E+ R P
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFP 256
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 144 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 198
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VAVK + N + ++ + + ++ L HPN+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ LV +Y G + L HG + +S V HQ++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV-------QYCHQKF- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
+ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 536 Q-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VAVK + N + ++ + + ++ L HPN+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ LV +Y G + L HG + +S V HQ++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV-------QYCHQKF- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
+ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 536 Q-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLP 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 364 LGKGSLGTVYKAV-LDDGG-IVAVKRLK-----DANPCARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA L +GG VA+KR++ + P + + + +HPNVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 417 L----RAYYYAKEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLA 471
L +E KL LV++++ + L + L PG +P + T ++ RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTE--TIKDMMFQLLRGLD 134
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG---GYKAPEQ 528
+H + +V H ++K N+L+ +G ++DFGL+ + + A+ + Y+APE
Sbjct: 135 FLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 529 AEVKRLSQKADVYSFGVLLLEVL 551
+ D++S G + E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 200
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 140 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 194
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 201
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 49/297 (16%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNRGPGRIPL-----DWTTRISLVLGAA 467
VV L L+V ++ G+L + L R +P D+ T L+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLICYSF 151
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG----- 522
+ +A+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 152 Q-VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 523 -YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVR 581
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE + R
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FCR 258
Query: 582 SVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 259 RL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 200
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 364 LGKGSLGTVYK--AVLDDGGIVAVKRLK----DANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+G+ TVYK + L D +VA+K ++ + PC A +E + ++ LKH N+V
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIRE----VSLLKDLKHANIVT 64
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L + ++ LV++YL L G I ++ L RGLA H++
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYL----DDCGNIINMHNVKLFL-FQLLRGLAYCHRQ 119
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGL----SLLLNPVQAIARLGGYKAPE-QAEV 531
KV H ++K N+L+++ G ++DFGL S+ Y+ P+
Sbjct: 120 ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAE 591
S + D++ G + E+ TGR P P EEQ + + + + +E W
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGR-------PLFPGSTVEEQLHFIFRILGTPTEETWPGI 228
Query: 592 VFDQELLRY 600
+ ++E Y
Sbjct: 229 LSNEEFKTY 237
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 143 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 197
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I KL H N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKLNHQNI 96
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 154
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 213
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 136
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 194
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGGYKA------ 525
Q H ++ + N LL G VA I DFG++ + I R G Y+
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA------RDIYRAGYYRKGGCAML 248
Query: 526 ------PEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 297
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPC---ARKEFEQYMDVIGKLKHPNVVKL 417
E +G G+ G V A G VA+K++ +A A++ + + ++ KH N++ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAI 118
Query: 418 RAYY-----YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ Y + + + V L LH ++H ++ PL + RGL
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKY 173
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLG------GYK 524
+H +A+V H ++K SN+L+++N I DFG++ L +P + + Y+
Sbjct: 174 MH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 525 APE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
APE + +Q D++S G + E+L R
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VAV+ + N + ++ + + ++ L HPN+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ LV +Y G + L HG + +S V HQ++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV-------QYCHQKF- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
+ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 536 Q-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLP 212
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 113
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 171
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGGYKA------ 525
Q H ++ + N LL G VA I DFG++ + I R G Y+
Sbjct: 172 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA------RDIYRAGYYRKGGCAML 225
Query: 526 ------PEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 274
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I KL H N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKLNHQNI 110
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 168
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 227
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 271
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG+GS G V++ G AVK+++ E+ + G L P +V L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAG-LSSPRIVPLYGAVR 134
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAA-RGLARIHQEYGTAK 481
+ + L GSL L+ + G +P D R LG A GL +H T +
Sbjct: 135 EGPWVNIFMELLEGGSLGQLI---KQMGCLPED---RALYYLGQALEGLEYLH----TRR 184
Query: 482 VPHGNVKSSNVLLDKNGV-ACISDFGLSLLLNPVQAIARL--GGY-------KAPEQAEV 531
+ HG+VK+ NVLL +G A + DFG +L L P L G Y APE
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP-SQY 559
K K D++S ++L +L G P +QY
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 26/231 (11%)
Query: 363 MLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+LGKGS G V K + + + + + ++ + + ++ +L HPN++KL
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ K LV + G L + + + D I VL G+ +H+
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV--DAARIIRQVLS---GITYMHKN-- 151
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
K+ H ++K N+LL+ K+ I DFGLS + + G Y APE
Sbjct: 152 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 208
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP----SQYPSPTRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P ++Y +V++ + +LP+W
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTFELPQW 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 37/231 (16%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 96
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 154
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGGYKA------ 525
Q H ++ + N LL G VA I DFG++ Q I R Y+
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA------QDIYRASYYRKGGCAML 208
Query: 526 ------PEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 257
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N ++ ++ I DFG++ + R GG +
Sbjct: 175 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 229
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKE 398
Y K +F +L + LG G+ G V +A +D + VAVK LK KE
Sbjct: 29 YNEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 86
Query: 399 -FEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHG------NRGPG 450
+ ++ L +H N+V L L++ +Y G L + L ++ G
Sbjct: 87 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG 146
Query: 451 RIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL- 509
R PL+ + A+G+A + + H +V + NVLL VA I DFGL+
Sbjct: 147 R-PLELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 201
Query: 510 LLNP----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
++N V+ ARL + APE + ++DV+S+G+LL E+ +
Sbjct: 202 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 26/231 (11%)
Query: 363 MLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+LGKGS G V K + + + + + ++ + + ++ +L HPN++KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ K LV + G L + + + D I VL G+ +H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV--DAARIIRQVLS---GITYMHKN-- 145
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
K+ H ++K N+LL+ K+ I DFGLS + + G Y APE
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 202
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP----SQYPSPTRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P ++Y +V++ + +LP+W
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTFELPQW 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 22/229 (9%)
Query: 363 MLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+LGKGS G V K + + + + + ++ + + ++ +L HPN++KL
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ K LV + G L + + + D I VL G+ +H+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV--DAARIIRQVLS---GITYMHKN-- 169
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
K+ H ++K N+LL+ K+ I DFGLS + + G Y APE
Sbjct: 170 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 226
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSP--TRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P + +V++ + +LP+W
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VAV+ + N + ++ + + ++ L HPN+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ LV +Y G + L HG + +S V HQ++
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV-------QYCHQKF- 133
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
+ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 536 Q-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLP 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 55/300 (18%)
Query: 364 LGKGSLGTVYKAVLDDGGI--------VAVKRLKDANPCA--RKEFEQYMDVIGKLKHPN 413
LG+G+ G V +A D GI VAVK LK+ + R + +I H N
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 414 VVKLRAYYYAKEEKLLVY-DYLPNGSLHSLLHGNRGPGRIPL-----DWTTRISLV---L 464
VV L L+V ++ G+L + L R +P D+ T L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLIXYSF 151
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-- 522
A+G+ + + K H ++ + N+LL + V I DFGL+ + R G
Sbjct: 152 QVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 523 ----YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ APE + + ++DV+SFGVLL E+ + A S YP ++DEE
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE-------- 255
Query: 579 WVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+ R + +E R + + M L C +P +RPT +E+ + + ++
Sbjct: 256 FXRRL-----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 22/229 (9%)
Query: 363 MLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+LGKGS G V K + + + + + ++ + + ++ +L HPN++KL
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ K LV + G L + + + D I VL G+ +H+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV--DAARIIRQVLS---GITYMHKN-- 168
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
K+ H ++K N+LL+ K+ I DFGLS + + G Y APE
Sbjct: 169 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-G 225
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSP--TRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P + +V++ + +LP+W
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 44/246 (17%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKLRA 419
LGKG+ G V+K++ G +VAVK++ DA + A++ F + M + H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 420 YYYAKEEK--LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
A ++ LV+DY+ LH+++ N L+ + +V + + +H
Sbjct: 77 VLRADNDRDVYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH--- 126
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------------------ 519
+ + H ++K SN+LL+ ++DFGLS ++ +
Sbjct: 127 -SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 520 -------LGGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEE 571
Y+APE + ++ D++S G +L E+L G+ P S T +++
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-PIFPGSSTMNQLERII 244
Query: 572 QAVDLP 577
+D P
Sbjct: 245 GVIDFP 250
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKE 398
Y K +F +L + LG G+ G V +A +D + VAVK LK KE
Sbjct: 37 YNEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 399 -FEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHG------NRGPG 450
+ ++ L +H N+V L L++ +Y G L + L ++ G
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG 154
Query: 451 RIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL- 509
R PL+ + A+G+A + + H +V + NVLL VA I DFGL+
Sbjct: 155 R-PLELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 209
Query: 510 LLNP----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
++N V+ ARL + APE + ++DV+S+G+LL E+ +
Sbjct: 210 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G VAVK LK ++ + ++ ++++ L H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 418 RAYYYAKEEK----LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ E+ L+ ++LP+GSL L N+ ++ ++ + +G+ +
Sbjct: 89 KGI--CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKAP 526
G+ + H ++ + NVL++ I DFGL+ + + + + AP
Sbjct: 143 ----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLT 552
E + +DV+SFGV L E+LT
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 95
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 153
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 212
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 256
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDA--NPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+GKG+ V A + G VAVK + N + ++ + + ++ L HPN+VKL
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 421 YYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ LV +Y G + L HG + +S V HQ++
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAV-------QYCHQKF- 126
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
+ H ++K+ N+LLD + I+DFG S + G Y APE + K+
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 536 Q-KADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +++G P
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLP 205
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKR-LKDANPCARKEFEQYMDVIGKLKHPNVV 415
L S ++LG GS GTV G VAVKR L D A E + + HPNV+
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVI 90
Query: 416 KLRAYYYAKEEKLLVYDYLP--NGSLHSLLHG-NRGPGRIPLDWTTR-ISLVLGAARGLA 471
+ YY ++ +Y L N +L L+ N + L ISL+ A G+A
Sbjct: 91 R---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLD-------------KNGVACISDFGLSLLLNPVQAIA 518
+H + K+ H ++K N+L+ +N ISDFGL L+ Q
Sbjct: 148 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 519 RLG--------GYKAP---EQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
R G++AP E++ +RL++ D++S G + +L+ G+ P
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF----EQYMDVIGKLKHPNVVKLRA 419
LG+GS G V A G ++ + A+ + E+ + + L+HP+++KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+K+E ++V +Y N ++ ++ + + +I + A R
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI---ISAVEYCHR------- 131
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS- 535
K+ H ++K N+LLD++ I+DFGLS ++ + G Y APE K +
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 536 QKADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +L R P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 403 MDVIGKLK----------HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI 452
+DV+GK+K HP+++KL + +V +Y+ G L + + GR+
Sbjct: 52 LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRV 108
Query: 453 PLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN 512
R+ + +A H V H ++K NVLLD + A I+DFGLS +++
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHM------VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Query: 513 PVQAIARLGG---YKAPEQAEVKRLSQ-KADVYSFGVLLLEVLTGRAP 556
+ + G Y APE + + + D++S GV+L +L G P
Sbjct: 163 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF----EQYMDVIGKLKHPNVVK 416
+ LG+GS G V A G ++ + A+ + E+ + + L+HP+++K
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L +K+E ++V +Y N ++ ++ + + +I + A R
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI---ISAVEYCHR---- 121
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKR 533
K+ H ++K N+LLD++ I+DFGLS ++ + G Y APE K
Sbjct: 122 ---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 534 LS-QKADVYSFGVLLLEVLTGRAP 556
+ + DV+S GV+L +L R P
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 96
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 154
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 213
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 257
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 361 AEMLGKGSLGTVYKAVLDD-GGIVAVKRLKDAN-----PCARKEFEQYMDVIGKLKHPNV 414
+++LG+G+ V++ G + A+K + + +EFE V+ KL H N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNI 69
Query: 415 VKLRAYYYAKEE------KLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
VKL +A EE K+L+ ++ P GSL+++L +P + +VL
Sbjct: 70 VKL----FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP---ESEFLIVLRDVV 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLL----DKNGVACISDFGLSLLLNPVQAIARLGG-- 522
G +E G + H N+K N++ D V ++DFG + L + L G
Sbjct: 123 GGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179
Query: 523 -YKAP---EQAEVKRLSQK-----ADVYSFGVLLLEVLTGRAPSQ-YPSPTRPR 566
Y P E+A +++ QK D++S GV TG P + + P R +
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKR-LKDANPCARKEFEQYMDVIGKLKHPNVV 415
L S ++LG GS GTV G VAVKR L D A E + + HPNV+
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVI 90
Query: 416 KLRAYYYAKEEKLLVYDYLP--NGSLHSLLHG-NRGPGRIPLDWTTR-ISLVLGAARGLA 471
+ YY ++ +Y L N +L L+ N + L ISL+ A G+A
Sbjct: 91 R---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLD-------------KNGVACISDFGLSLLLNPVQAIA 518
+H + K+ H ++K N+L+ +N ISDFGL L+ Q
Sbjct: 148 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 519 RLG--------GYKAP---EQAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
R G++AP E++ +RL++ D++S G + +L+ G+ P
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 95
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 153
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 212
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 256
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 364 LGKGSLGTVYKAVLD-----DGGIVAVKRLK-DANPCARKEFEQYMDVIGKLKHPNVVKL 417
LG+G G V D G VAVK LK ++ + ++ ++++ L H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 418 RAYYYAKEEK----LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ E+ L+ ++LP+GSL L N+ ++ ++ + +G+ +
Sbjct: 77 KGI--CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYL 130
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YKAP 526
G+ + H ++ + NVL++ I DFGL+ + + + + AP
Sbjct: 131 ----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLT 552
E + +DV+SFGV L E+LT
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 42/234 (17%)
Query: 361 AEMLGKGSLGTVYKAVLDD-GGIVAVKRLKDAN-----PCARKEFEQYMDVIGKLKHPNV 414
+++LG+G+ V++ G + A+K + + +EFE V+ KL H N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNI 69
Query: 415 VKLRAYYYAKEE------KLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
VKL +A EE K+L+ ++ P GSL+++L +P + +VL
Sbjct: 70 VKL----FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP---ESEFLIVLRDVV 122
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLL----DKNGVACISDFGLSLLLNPVQAIARLGG-- 522
G +E G + H N+K N++ D V ++DFG + L + L G
Sbjct: 123 GGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTE 179
Query: 523 -YKAP---EQAEVKRLSQK-----ADVYSFGVLLLEVLTGRAPSQ-YPSPTRPR 566
Y P E+A +++ QK D++S GV TG P + + P R +
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 122
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 180
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 181 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 239
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 283
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 119 LSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQVXXXXXXXXXXXXXXXXXGRIPX 178
+S N S IP +I S+ + L+L N+I G IP++V GRIP
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 695
Query: 179 XXXXXXXXXXXXXXXXXXYGRVPE-GLLKKFGEQSFIGNEGLCGSSPLPAC 228
G +PE G + F F+ N GLCG PLP C
Sbjct: 696 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG-YPLPRC 745
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 108 LTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQV 156
L+NCTNL LS N + EIP I L+ + L LS+N+ G IP ++
Sbjct: 483 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 114 LKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQ 155
L + LS N IP +S+L + +DLS+NN+ G IPE
Sbjct: 679 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 99 NRLNGTILPLTNCTN----LKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPE 154
N +G ILP C N L+ YL N F+ +IP +S+ ++ L LS N + G IP
Sbjct: 375 NNFSGPILP-NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Query: 155 QVXXXXXXXXXXXXXXXXXGRIPXXXXXXXXXXXXXXXXXXXYGRVPEGL 204
+ G IP G +P GL
Sbjct: 434 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 99 NRLNGTILP-LTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIP 153
NRL G I + NL + LS N FS IP ++ + ++ LDL+ N G IP
Sbjct: 497 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 114 LKLAYLSGNDFSAEIPHQISSLKG-ILRLDLSDNNIRGRI 152
LK+ LS N+FS E+P +++L +L LDLS NN G I
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 35/97 (36%)
Query: 114 LKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQVXXXXXXXXXXXXXXXXX 173
L+ L ND + EIP +S+ + + LS+N + G IP+ +
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 174 GRIPXXXXXXXXXXXXXXXXXXXYGRVPEGLLKKFGE 210
G IP G +P + K+ G+
Sbjct: 525 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 561
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 99 NRLNGTI-LPLTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPE 154
N+L+G ++ CT LKL +S N F IP LK + L L++N G IP+
Sbjct: 230 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPD 284
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 122 NDFSAEIPHQ-ISSLKGILRLDLSDNNIRGRIPEQV 156
N+FS E+P + ++G+ LDLS N G +PE +
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 360
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG+G+ G V K + G I+AVKR++ A ++++ MD+ ++ + +Y
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 423 A--KEEKLLVYDYLPNGSLHSLLHGNRGPGR-IPLDWTTRISLVLGAARGLARIHQEYGT 479
A +E + + L + SL G+ IP D +I++ + + L +H +
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI--VKALEHLHSKLS- 130
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLS-LLLNPVQAIARLGG--YKAPE----QAEVK 532
V H +VK SNVL++ G + DFG+S L++ V G Y APE + K
Sbjct: 131 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
S K+D++S G+ ++E+ R P
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF----EQYMDVIGKLKHPNVVK 416
+ LG+GS G V A G ++ + A+ + E+ + + L+HP+++K
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L +K+E ++V +Y N ++ ++ + + +I + A R
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI---ISAVEYCHR---- 130
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKR 533
K+ H ++K N+LLD++ I+DFGLS ++ + G Y APE K
Sbjct: 131 ---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 534 LSQ-KADVYSFGVLLLEVLTGRAP 556
+ + DV+S GV+L +L R P
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 112
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 170
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 171 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 229
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 273
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 119 LSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQVXXXXXXXXXXXXXXXXXGRIPX 178
+S N S IP +I S+ + L+L N+I G IP++V GRIP
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698
Query: 179 XXXXXXXXXXXXXXXXXXYGRVPE-GLLKKFGEQSFIGNEGLCGSSPLPAC 228
G +PE G + F F+ N GLCG PLP C
Sbjct: 699 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG-YPLPRC 748
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 108 LTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQV 156
L+NCTNL LS N + EIP I L+ + L LS+N+ G IP ++
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 114 LKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQ 155
L + LS N IP +S+L + +DLS+NN+ G IPE
Sbjct: 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 99 NRLNGTILPLTNCTN----LKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPE 154
N +G ILP C N L+ YL N F+ +IP +S+ ++ L LS N + G IP
Sbjct: 378 NNFSGPILP-NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Query: 155 QVXXXXXXXXXXXXXXXXXGRIPXXXXXXXXXXXXXXXXXXXYGRVPEGL 204
+ G IP G +P GL
Sbjct: 437 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 114 LKLAYLSGNDFSAEIPHQISSLKG-ILRLDLSDNNIRGRI 152
LK+ LS N+FS E+P +++L +L LDLS NN G I
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 99 NRLNGTILP-LTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIP 153
NRL G I + NL + LS N FS IP ++ + ++ LDL+ N G IP
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 35/97 (36%)
Query: 114 LKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQVXXXXXXXXXXXXXXXXX 173
L+ L ND + EIP +S+ + + LS+N + G IP+ +
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 174 GRIPXXXXXXXXXXXXXXXXXXXYGRVPEGLLKKFGE 210
G IP G +P + K+ G+
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 99 NRLNGTIL-PLTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPE 154
N+L+G ++ CT LKL +S N F IP LK + L L++N G IP+
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPD 287
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 122 NDFSAEIPHQ-ISSLKGILRLDLSDNNIRGRIPEQV 156
N+FS E+P + ++G+ LDLS N G +PE +
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 110
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 168
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 227
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 271
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 87
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 145
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 146 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 204
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 248
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 403 MDVIGKLK----------HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI 452
+DV+GK+K HP+++KL + +V +Y+ G L + + GR+
Sbjct: 52 LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRV 108
Query: 453 PLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN 512
R+ + +A H V H ++K NVLLD + A I+DFGLS +++
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHM------VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Query: 513 PVQAIARLGG---YKAPEQAEVKRLSQ-KADVYSFGVLLLEVLTGRAP 556
+ + G Y APE + + + D++S GV+L +L G P
Sbjct: 163 DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 384 AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL 443
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L +
Sbjct: 48 AIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKV 104
Query: 444 HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC-- 501
GN+ L T + +H+ + H ++K NVLL C
Sbjct: 105 VGNKR-----LKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLI 155
Query: 502 -ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTGR 554
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 156 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 215
Query: 555 AP 556
P
Sbjct: 216 PP 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 384 AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL 443
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L +
Sbjct: 55 AIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKV 111
Query: 444 HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC-- 501
GN+ L T + +H+ + H ++K NVLL C
Sbjct: 112 VGNKR-----LKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLI 162
Query: 502 -ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTGR 554
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 163 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 222
Query: 555 AP 556
P
Sbjct: 223 PP 224
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 364 LGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEF----EQYMDVIGKLKHPNVVKLRA 419
LG+GS G V A G ++ + A+ + E+ + + L+HP+++KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGT 479
+K+E ++V +Y N ++ ++ + + +I + A R
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQI---ISAVEYCHR------- 125
Query: 480 AKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS- 535
K+ H ++K N+LLD++ I+DFGLS ++ + G Y APE K +
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 536 QKADVYSFGVLLLEVLTGRAP 556
+ DV+S GV+L +L R P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 384 AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL 443
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L +
Sbjct: 49 AIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKV 105
Query: 444 HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC-- 501
GN+ L T + +H+ + H ++K NVLL C
Sbjct: 106 VGNKR-----LKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLI 156
Query: 502 -ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTGR 554
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 555 AP 556
P
Sbjct: 217 PP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 384 AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL 443
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L +
Sbjct: 49 AIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKV 105
Query: 444 HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC-- 501
GN+ L T + +H+ + H ++K NVLL C
Sbjct: 106 VGNKR-----LKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLI 156
Query: 502 -ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTGR 554
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 555 AP 556
P
Sbjct: 217 PP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 384 AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL 443
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L +
Sbjct: 49 AIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKV 105
Query: 444 HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC-- 501
GN+ L T + +H+ + H ++K NVLL C
Sbjct: 106 VGNKR-----LKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLI 156
Query: 502 -ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTGR 554
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 555 AP 556
P
Sbjct: 217 PP 218
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V++ G AVK+++ E+ + G L P +V L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAG-LSSPRIVPLYGAVR 136
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAA-RGLARIHQEYGTAK 481
+ + L GSL L+ + G +P D R LG A GL +H T +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLI---KQMGCLPED---RALYYLGQALEGLEYLH----TRR 186
Query: 482 VPHGNVKSSNVLLDKNGV-ACISDFGLSLLLNPVQAIARL--GGY-------KAPEQAEV 531
+ HG+VK+ NVLL +G A + DFG +L L P L G Y APE
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP-SQY 559
K K D++S ++L +L G P +QY
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 364 LGKGSLGTVY----KAVLDDG--GIVAVKRLKDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
LG+GS G VY K V+ D VA+K + +A R EF V+ + +VV+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGRIPLDWTTRISLVLGAARGLA 471
L + L++ + + G L S L R P P + I + A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG-------YK 524
++ K H ++ + N + ++ I DFG++ + R GG +
Sbjct: 140 YLN----ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWM 194
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT 552
+PE + + +DV+SFGV+L E+ T
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARK-EFEQYMD--VIGKLKHPNV 414
LG G+ G VY+ + D + VAVK L + C+ + E + M+ +I K H N+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 102
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+ + ++ + + G L S L R P + + +L AR +A
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGC 160
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YK 524
Q H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 161 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWM 219
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 263
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D VAVK LK + P A +F + ++ + L H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 138
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 139 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIG--KLKHPNVVKLRAY 420
+G+GS G V++ G AVK++ R E + +++ L P +V L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 118
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAA-RGLARIHQEYGT 479
+ + L GSL L+ + G +P D R LG A GL +H T
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLI---KQMGCLPED---RALYYLGQALEGLEYLH----T 168
Query: 480 AKVPHGNVKSSNVLLDKNGV-ACISDFGLSLLLNPVQAIARL--GGY-------KAPEQA 529
++ HG+VK+ NVLL +G A + DFG +L L P L G Y APE
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAP-SQY 559
K K D++S ++L +L G P +QY
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 383 VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSL 442
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L
Sbjct: 173 FAIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDK 229
Query: 443 LHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC- 501
+ GN+ L T + +H+ + H ++K NVLL C
Sbjct: 230 VVGNKR-----LKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCL 280
Query: 502 --ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTG 553
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 281 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
Query: 554 RAP 556
P
Sbjct: 341 YPP 343
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
Query: 363 MLGKGSLGTVYKA-VLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKL----KHPNVVKL 417
+LGKGS G V A V + G + AVK LK + E M L HP + +L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ + V +++ G L + +R D L +H +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-----FDEARARFYAAEIISALMFLHDK- 143
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIARLG--GYKAPEQAEVKR 533
+ + ++K NVLLD G ++DFG+ + N V G Y APE +
Sbjct: 144 ---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 534 LSQKADVYSFGVLLLEVLTGRAPSQ 558
D ++ GVLL E+L G AP +
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 361 AEMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHP 412
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHP 92
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
VKL + E+ Y NG L L R G D T L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCL---LKYIRKIGS--FDETCTRFYTAEIVSALEY 147
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAP 526
+H + + H ++K N+LL+++ I+DFG + +L+P AR Y +P
Sbjct: 148 LHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E K S+ +D+++ G ++ +++ G P
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D VAVK LK + P A +F + ++ + L H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 132
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 133 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 43/239 (17%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKE 398
Y K +F +L + LG G+ G V +A +D + VAVK LK KE
Sbjct: 37 YNEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 399 -FEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPG------ 450
+ ++ L +H N+V L L++ +Y G L + L R PG
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYN 154
Query: 451 -----------RIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGV 499
R L +++++ A+G+A + + H +V + NVLL V
Sbjct: 155 PSHNPEEQLSSRDLLHFSSQV------AQGMAFL----ASKNCIHRDVAARNVLLTNGHV 204
Query: 500 ACISDFGLSL-LLNP----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
A I DFGL+ ++N V+ ARL + APE + ++DV+S+G+LL E+ +
Sbjct: 205 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 384 AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLL 443
A+ ++A+P E E ++++ KL HP ++K++ ++ A E+ +V + + G L +
Sbjct: 188 AIGSAREADPALNVETE--IEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKV 244
Query: 444 HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVAC-- 501
GN+ L T + +H+ + H ++K NVLL C
Sbjct: 245 VGNK-----RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLI 295
Query: 502 -ISDFGLSLLLNPVQAIARLGG---YKAPE---QAEVKRLSQKADVYSFGVLLLEVLTGR 554
I+DFG S +L + L G Y APE ++ D +S GV+L L+G
Sbjct: 296 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 355
Query: 555 AP 556
P
Sbjct: 356 PP 357
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D VAVK LK + P A +F + ++ + L H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 129 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D VAVK LK + P A +F + ++ + L H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 138
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 139 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG+GS G V++ G AVK+++ E+ M G L P +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR----LEVFRAEELMACAG-LTSPRIVPLYGAVR 155
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAA-RGLARIHQEYGTAK 481
+ + L GSL L+ + G +P D R LG A GL +H + +
Sbjct: 156 EGPWVNIFMELLEGGSLGQLV---KEQGCLPED---RALYYLGQALEGLEYLH----SRR 205
Query: 482 VPHGNVKSSNVLLDKNGV-ACISDFGLSLLLNP---------VQAIARLGGYKAPEQAEV 531
+ HG+VK+ NVLL +G A + DFG ++ L P I + APE
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+ K DV+S ++L +L G P
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D VAVK LK + P A +F + ++ + L H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 129 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 16 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 125
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 126 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 352 ELEDLLRASAEMLGKGSLGTVYKAV----LDDGGIVAVKRLK------DANPCARKEFEQ 401
E +LLR +LGKG G V++ + G I A+K LK +A A + E+
Sbjct: 17 ECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD----WT 457
+++ ++KHP +V L + + L+ +YL G L L G D +
Sbjct: 73 --NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYL 127
Query: 458 TRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL---SLLLNPV 514
IS+ LG +HQ+ + + ++K N++L+ G ++DFGL S+ V
Sbjct: 128 AEISMALG------HLHQK----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 515 -QAIARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE ++ D +S G L+ ++LTG P
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 362 EMLGKGSLGTV-----YKAVLDDG-GIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVV 415
E LG+GS G V YK ++ + LK ++ R E E + + L+HP+++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVERE--ISYLKLLRHPHII 72
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
KL + ++V +Y G L + + R+ D R + A H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH- 127
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
K+ H ++K N+LLD N I+DFGLS ++ + G Y APE K
Sbjct: 128 -----KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 533 RLS-QKADVYSFGVLLLEVLTGRAP 556
+ + DV+S G++L +L GR P
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG+GS G V++ G AVK+++ E+ M G L P +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR----LEVFRAEELMACAG-LTSPRIVPLYGAVR 136
Query: 423 AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAA-RGLARIHQEYGTAK 481
+ + L GSL L+ + G +P D R LG A GL +H + +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLV---KEQGCLPED---RALYYLGQALEGLEYLH----SRR 186
Query: 482 VPHGNVKSSNVLLDKNGV-ACISDFGLSLLLNP---------VQAIARLGGYKAPEQAEV 531
+ HG+VK+ NVLL +G A + DFG ++ L P I + APE
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+ K DV+S ++L +L G P
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 19/217 (8%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGK 408
K++ + D + S ++LG G G V + G +L +P AR+E + + G
Sbjct: 3 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG 62
Query: 409 LKHPNVVKLRAYY----YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
P++V + Y + K L++ + + G L S + RG I +
Sbjct: 63 ---PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQ-ERGDQAFTEREAAEIMRDI 118
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLS--LLLNPVQAIAR 519
G A H + H +VK N+L +K+ V ++DFG + N +Q
Sbjct: 119 GTAIQFLHSH------NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 172
Query: 520 LGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE ++ + D++S GV++ +L G P
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 120
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLD--DGGIV--AVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D G V AVK LK + P A +F + ++ + L H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 132
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 133 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K LK A+ E + V+ +HP +
Sbjct: 15 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L H +R R+ + R GA L
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE--RVFSEDRARF---YGAEIVSALDY 124
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H E V + ++K N++LDK+G I+DFGL + + G Y APE
Sbjct: 125 LHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 181
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 56/319 (17%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL------DDGGIVAVKRLK-DANPCARK 397
Y+ K +F L + + LG G+ G V +A D VAVK LK A+ R+
Sbjct: 14 YDHKWEFPRNRL--SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 71
Query: 398 EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--------G 448
+ V+ L H N+V L L++ +Y G L + L R
Sbjct: 72 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131
Query: 449 PGRIPLDWTTRI-----SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACIS 503
P + D S A+G+A + + H ++ + N+LL + I
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKIC 187
Query: 504 DFGLSLLLNP-----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPS 557
DFGL+ + V+ ARL + APE + ++DV+S+G+ L E+ + +
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS- 246
Query: 558 QYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLAC 617
P P P VD + + + + R + E AE++D + C
Sbjct: 247 --PYPGMP-VDSKFYKM-IKEGFRMLSPEHAPAEMYD------------------IMKTC 284
Query: 618 VVSQPEKRPTMAEVAKMIE 636
+ P KRPT ++ ++IE
Sbjct: 285 WDADPLKRPTFKQIVQLIE 303
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K LK A+ E + V+ +HP +
Sbjct: 16 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L H +R R+ ++ + GA L
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE--RV---FSEDRARFYGAEIVSALDY 125
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H E V + ++K N++LDK+G I+DFGL + + G Y APE
Sbjct: 126 LHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 182
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 362 EMLGKGSLGTVYKAVLDDGG----IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNV 414
E LG GS G V + D VAVK LK + P A +F + ++ + L H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
++L K+ V + P GSL L ++G L +R ++ + G
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLE-- 128
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG-----GYKAPE 527
+ + H ++ + N+LL + I DFGL +L N + + + APE
Sbjct: 129 ----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLT-GRAP 556
+ + S +D + FGV L E+ T G+ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 352 ELEDLLRASAEMLGKGSLGTVYKAV----LDDGGIVAVKRLK------DANPCARKEFEQ 401
E +LLR +LGKG G V++ + G I A+K LK +A A + E+
Sbjct: 17 ECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 402 YMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLD----WT 457
+++ ++KHP +V L + + L+ +YL G L L G D +
Sbjct: 73 --NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYL 127
Query: 458 TRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL---SLLLNPV 514
IS+ LG +HQ+ + + ++K N++L+ G ++DFGL S+ V
Sbjct: 128 AEISMALG------HLHQK----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 515 -QAIARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE ++ D +S G L+ ++LTG P
Sbjct: 178 THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDAN-----PCARKEFEQYMDVIGKLKHPNVVKL 417
+G G+ GTVYKA G VA+K ++ N P + + + +HPNVV+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 418 RAYYYA----KEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+E K+ LV++++ + L + L PG L T L+ RGL
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG---GYKAPEQA 529
+H + H ++K N+L+ G ++DFGL+ + + A+A + Y+APE
Sbjct: 128 LHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 530 EVKRLSQKADVYSFGVLLLEVL 551
+ D++S G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMF 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K LK A+ E + V+ +HP +
Sbjct: 14 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L H +R R+ + R GA L
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE--RVFSEDRARF---YGAEIVSALDY 123
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H E V + ++K N++LDK+G I+DFGL + + G Y APE
Sbjct: 124 LHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 180
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 25/225 (11%)
Query: 364 LGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKEFEQYMD--VIGKLKHPNVV 415
LG G+ G VY+ + D + VAVK L + + E + M+ +I K H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVY-SEQDELDFLMEALIISKFNHQNIV 111
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+ + ++ + + G L S L R P + + +L AR +A Q
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVARDIACGCQ 169
Query: 476 EYGTAKVPHGNVKSSNVLLDKNG---VACISDFGLSLLLNPVQAIARLGG-------YKA 525
H ++ + N LL G VA I DFG++ + + R GG +
Sbjct: 170 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMP 228
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLT-GRAPSQYPSPTRPRVDE 569
PE + K D +SFGVLL E+ + G P YPS + V E
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLE 271
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 19/217 (8%)
Query: 349 KQFELEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGK 408
K++ + D + S ++LG G G V + G +L +P AR+E + + G
Sbjct: 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG 81
Query: 409 LKHPNVVKLRAYY----YAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
P++V + Y + K L++ + + G L S + RG I +
Sbjct: 82 ---PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQ-ERGDQAFTEREAAEIMRDI 137
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLS--LLLNPVQAIAR 519
G A H + H +VK N+L +K+ V ++DFG + N +Q
Sbjct: 138 GTAIQFLHSH------NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 191
Query: 520 LGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE ++ + D++S GV++ +L G P
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGGIV-AVKRLKDANPCARKEFEQYMD----VIGKLKHPNVVK 416
+++GKGS G V A + AVK L+ +KE + M ++ +KHP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
L + ++ V DY+ G L H R R L+ R A L +H
Sbjct: 104 LHFSFQTADKLYFVLDYINGGEL--FYHLQRE--RCFLEPRARF-YAAEIASALGYLH-- 156
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGL---SLLLNPVQA-IARLGGYKAPEQAEVK 532
+ + + ++K N+LLD G ++DFGL ++ N + Y APE +
Sbjct: 157 --SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
+ D + G +L E+L G P
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKR-LKDANPCARKEFEQYMDVIGKLKHPNVV 415
L S ++LG GS GTV G VAVKR L D A E + + HPNV+
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVI 72
Query: 416 KLRAYYYAKEEKLLVYDYLP--NGSLHSLLHG-NRGPGRIPLDWTTR-ISLVLGAARGLA 471
+ YY ++ +Y L N +L L+ N + L ISL+ A G+A
Sbjct: 73 R---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLD-------------KNGVACISDFGLSLLLNPVQAIA 518
+H + K+ H ++K N+L+ +N ISDFGL L+ Q
Sbjct: 130 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 519 RLG--------GYKAPEQAE-------VKRLSQKADVYSFGVLLLEVLT-GRAP 556
R G++APE E +RL++ D++S G + +L+ G+ P
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 120
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 120
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 56/319 (17%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL------DDGGIVAVKRLK-DANPCARK 397
Y+ K +F L + + LG G+ G V +A D VAVK LK A+ R+
Sbjct: 37 YDHKWEFPRNRL--SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 94
Query: 398 EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--------G 448
+ V+ L H N+V L L++ +Y G L + L R
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 449 PGRIPLDWTTRI-----SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACIS 503
P + D S A+G+A + + H ++ + N+LL + I
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKIC 210
Query: 504 DFGLSLLLNP-----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPS 557
DFGL+ + V+ ARL + APE + ++DV+S+G+ L E+ + +
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS- 269
Query: 558 QYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLAC 617
P P P VD + + + + R + E AE++D + C
Sbjct: 270 --PYPGMP-VDSKFYKM-IKEGFRMLSPEHAPAEMYD------------------IMKTC 307
Query: 618 VVSQPEKRPTMAEVAKMIE 636
+ P KRPT ++ ++IE
Sbjct: 308 WDADPLKRPTFKQIVQLIE 326
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 357 LRASAEMLGKGSLGTVYKAVLDDGGIVAVKR-LKDANPCARKEFEQYMDVIGKLKHPNVV 415
L S ++LG GS GTV G VAVKR L D A E + + HPNV+
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVI 72
Query: 416 KLRAYYYAKEEKLLVYDYLP--NGSLHSLLHG-NRGPGRIPLDWTTR-ISLVLGAARGLA 471
+ YY ++ +Y L N +L L+ N + L ISL+ A G+A
Sbjct: 73 R---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLD-------------KNGVACISDFGLSLLLNPVQAIA 518
+H + K+ H ++K N+L+ +N ISDFGL L+ Q+
Sbjct: 130 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 519 RLG--------GYKAPEQAE-------VKRLSQKADVYSFGVLLLEVLT-GRAP 556
R G++APE E +RL++ D++S G + +L+ G+ P
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K LK A+ E + V+ +HP +
Sbjct: 157 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L H +R R+ + R GA L
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE--RVFSEDRARF---YGAEIVSALDY 266
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H E V + ++K N++LDK+G I+DFGL + + G Y APE
Sbjct: 267 LHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 14 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 123
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 124 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K LK A+ E + V+ +HP +
Sbjct: 154 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L H +R R+ + R GA L
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE--RVFSEDRARF---YGAEIVSALDY 263
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H E V + ++K N++LDK+G I+DFGL + + G Y APE
Sbjct: 264 LHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 120
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 362 EMLGKGSLGTVYK----AVLDDGGIVAVKRLKDANPCARKEFEQYM----DVIGKLKH-P 412
++LG G+ G V+ + D G + A+K LK A + + ++ V+ ++ P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 413 NVVKLRAYYYAKEEKL-LVYDYLPNGSLHSLL-HGNRGPGRIPLDWTTRISLVLGAARGL 470
+V L Y + E KL L+ DY+ G L + L R + I L L L
Sbjct: 120 FLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--LLLNPVQAIARLGG---YKA 525
I++ ++K N+LLD NG ++DFGLS + + + G Y A
Sbjct: 179 GIIYR----------DIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 526 PE--QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
P+ + + D +S GVL+ E+LTG +P
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 56/319 (17%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL------DDGGIVAVKRLK-DANPCARK 397
Y+ K +F L + + LG G+ G V +A D VAVK LK A+ R+
Sbjct: 30 YDHKWEFPRNRL--SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 87
Query: 398 EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--------G 448
+ V+ L H N+V L L++ +Y G L + L R
Sbjct: 88 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 147
Query: 449 PGRIPLDWTTRI-----SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACIS 503
P + D S A+G+A + + H ++ + N+LL + I
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKIC 203
Query: 504 DFGLSLLLNP-----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPS 557
DFGL+ + V+ ARL + APE + ++DV+S+G+ L E+ + +
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS- 262
Query: 558 QYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLAC 617
P P P VD + + + + R + E AE++D + C
Sbjct: 263 --PYPGMP-VDSKFYKM-IKEGFRMLSPEHAPAEMYD------------------IMKTC 300
Query: 618 VVSQPEKRPTMAEVAKMIE 636
+ P KRPT ++ ++IE
Sbjct: 301 WDADPLKRPTFKQIVQLIE 319
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 362 EMLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNV 414
++LGKG+ G V KA G A+K L+ A+ E + V+ +HP +
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA--ARGLAR 472
L+ + + V +Y G L L R +T + GA L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSALEY 120
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKAPEQ 528
+H + V + ++K N++LDK+G I+DFGL ++ + G Y APE
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E + D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 56/319 (17%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL------DDGGIVAVKRLK-DANPCARK 397
Y+ K +F L + + LG G+ G V +A D VAVK LK A+ R+
Sbjct: 37 YDHKWEFPRNRL--SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 94
Query: 398 EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--------G 448
+ V+ L H N+V L L++ +Y G L + L R
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 449 PGRIPLDWTTRI-----SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACIS 503
P + D S A+G+A + + H ++ + N+LL + I
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKIC 210
Query: 504 DFGLSLLLNP-----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPS 557
DFGL+ + V+ ARL + APE + ++DV+S+G+ L E+ + +
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS- 269
Query: 558 QYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLAC 617
P P P VD + + + + R + E AE++D + C
Sbjct: 270 --PYPGMP-VDSKFYKM-IKEGFRMLSPEHAPAEMYD------------------IMKTC 307
Query: 618 VVSQPEKRPTMAEVAKMIE 636
+ P KRPT ++ ++IE
Sbjct: 308 WDADPLKRPTFKQIVQLIE 326
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 91
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 147 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 56/319 (17%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL------DDGGIVAVKRLK-DANPCARK 397
Y+ K +F L + + LG G+ G V +A D VAVK LK A+ R+
Sbjct: 32 YDHKWEFPRNRL--SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 89
Query: 398 EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR--------G 448
+ V+ L H N+V L L++ +Y G L + L R
Sbjct: 90 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 149
Query: 449 PGRIPLDWTTRI-----SLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACIS 503
P + D S A+G+A + + H ++ + N+LL + I
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKIC 205
Query: 504 DFGLSLLLNP-----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPS 557
DFGL+ + V+ ARL + APE + ++DV+S+G+ L E+ + +
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS- 264
Query: 558 QYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLAC 617
P P P VD + + + + R + E AE++D + C
Sbjct: 265 --PYPGMP-VDSKFYKM-IKEGFRMLSPEHAPAEMYD------------------IMKTC 302
Query: 618 VVSQPEKRPTMAEVAKMIE 636
+ P KRPT ++ ++IE
Sbjct: 303 WDADPLKRPTFKQIVQLIE 321
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L KE E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+++D+ G ++DFGL+ + + Y APE K
Sbjct: 166 ----------DLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 71
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 126
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 127 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L KE E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+++D+ G ++DFGL+ + + Y APE K
Sbjct: 166 ----------DLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGIVA-VKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
L + G ++K IV V +++D + ++F + + HPNV+ +
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 423 A--KEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ L+ + P GSL+++LH +D + + L ARG A +H
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGTN---FVVDQSQAVKFALDXARGXAFLHTL--EP 132
Query: 481 KVPHGNVKSSNVLLDKNGVACISDFGLSL-LLNPVQAIARLGGYKAPEQAEVKRLS---Q 536
+P + S +V +D++ A IS + +P + A + APE + K +
Sbjct: 133 LIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYA--PAWVAPEALQKKPEDTNRR 190
Query: 537 KADVYSFGVLLLEVLTGRAP 556
AD +SF VLL E++T P
Sbjct: 191 SADXWSFAVLLWELVTREVP 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 70
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 125
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 126 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 68
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYL 123
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 124 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDAN-----PCARKEFEQYMDVIGKLKHPNVVKL 417
+G G+ GTVYKA G VA+K ++ N P + + + +HPNVV+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 418 RAYYYA----KEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+E K+ LV++++ + L + L PG L T L+ RGL
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS------LLLNPVQAIARLGGYKAP 526
+H + H ++K N+L+ G ++DFGL+ + L+PV Y+AP
Sbjct: 128 LHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL---WYRAP 180
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVL 551
E + D++S G + E+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 69
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYL 124
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 125 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 94
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 149
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 150 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 91
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 147 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 361 AEMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHP 412
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHP 92
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
VKL + E+ Y NG L L R G D T L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEY 147
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAP 526
+H + + H ++K N+LL+++ I+DFG + +L+P AR Y +P
Sbjct: 148 LHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E K + +D+++ G ++ +++ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 93
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 149 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 94
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 149
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 150 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 93
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 149 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 75
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYL 130
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 131 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 364 LGKGSLGTVYKAVLD-DGGIVAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G V AV G VA+K+L + A++ + + + ++ ++H NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE-LRLLKHMRHENVIGLLD 91
Query: 420 YYYAKE------EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ E + LV ++ + H G RI LV +GL I
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYI 144
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPE 527
H A + H ++K N+ ++++ I DFGL+ QA + + G Y+APE
Sbjct: 145 H----AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPE 195
Query: 528 QA-EVKRLSQKADVYSFGVLLLEVLTGRA 555
R +Q D++S G ++ E++TG+
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 25/229 (10%)
Query: 362 EMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVV 415
E LGKG+ V + V G I+ K+L + ++ E+ + LKHPN+V
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD---HQKLEREARICRLLKHPNIV 73
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+L + L++D + G L + D + I +L A + HQ
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA---VLHCHQ 128
Query: 476 EYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQ 528
V H N+K N+LL K ++DFGL++ + Q A GY +PE
Sbjct: 129 ----MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
+ D+++ GV+L +L G P R + A D P
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 91
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 147 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 98
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 153
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 154 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 363 MLGKGSLGTVY----KAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+LGKGS G V K + + + + + ++ + + ++ +L HPN+ KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ K LV + G L + + + D I VL G+ H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV--DAARIIRQVLS---GITYXHKN-- 145
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
K+ H ++K N+LL+ K+ I DFGLS + G Y APE
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH-G 202
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP----SQYPSPTRPRVDEEEQAVDLPKW 579
+K DV+S GV+L +L+G P ++Y +V++ + +LP+W
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTFELPQW 251
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 152 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 93
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 149 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 90
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYL 145
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 146 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 93
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 149 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 96
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYTAEIVSALEYL 151
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 152 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Query: 362 EMLGKGSLGTVYKA-VLDDGGIVAVKRLKDAN-------PCARKEFEQYMDVIGKLKHPN 413
++LG+GS TV A L A+K L+ + P +E DV+ +L HP
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPF 90
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
VKL + E+ Y NG L L R G D T L +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIG--SFDETCTRFYTAEIVSALEYL 145
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR------LGGYKAPE 527
H + + H ++K N+LL+++ I+DFG + +L+P AR Y +PE
Sbjct: 146 HGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
K + +D+++ G ++ +++ G P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPEQAEV 531
+ K H ++ + N+LL + V I DFGL+ + R G + APE
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 276
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAE 591
+ + ++DV+SFGVLL E+ + A S YP ++DEE + R +
Sbjct: 277 RVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FCRRL-------- 316
Query: 592 VFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+E R + + M L C +P +RPT +E+ + + ++
Sbjct: 317 ---KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPEQAEV 531
+ K H ++ + N+LL + V I DFGL+ + R G + APE
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 274
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAE 591
+ + ++DV+SFGVLL E+ + A S YP ++DEE + R +
Sbjct: 275 RVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FCRRL-------- 314
Query: 592 VFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+E R + + M L C +P +RPT +E+ + + ++
Sbjct: 315 ---KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 404 DVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLV 463
DV+ +L HP VKL + E+ Y NG L L R G D T
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL---LKYIRKIGS--FDETCTRFYT 136
Query: 464 LGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIAR---- 519
L +H + + H ++K N+LL+++ I+DFG + +L+P AR
Sbjct: 137 AEIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 520 --LGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y +PE K + +D+++ G ++ +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPEQAEV 531
+ K H ++ + N+LL + V I DFGL+ + R G + APE
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 267
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAE 591
+ + ++DV+SFGVLL E+ + A S YP ++DEE + R +
Sbjct: 268 RVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FCRRL-------- 307
Query: 592 VFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+E R + + M L C +P +RPT +E+ + + ++
Sbjct: 308 ---KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG------YKAPEQAEV 531
+ K H ++ + N+LL + V I DFGL+ + R G + APE
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 269
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAE 591
+ + ++DV+SFGVLL E+ + A S YP ++DEE + R +
Sbjct: 270 RVYTIQSDVWSFGVLLWEIFSLGA-SPYPG---VKIDEE--------FCRRL-------- 309
Query: 592 VFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDI 638
+E R + + M L C +P +RPT +E+ + + ++
Sbjct: 310 ---KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRG-PGRIPLDWTTRISLVLGAARG 469
HP +V L + + + V +Y+ G L + R P ++ ISL L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKA 525
I++ ++K NVLLD G ++D+G+ L P + G Y A
Sbjct: 140 RGIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + D ++ GVL+ E++ GR+P
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
+G GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
+G GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 342 LVFYERKKQFELE-DLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLK-DANPCARKE 398
L F + FE++ D L E LG+G+ G V K + G I AVKR++ N +K
Sbjct: 20 LYFQGAXENFEVKADDLEPIXE-LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR 78
Query: 399 FEQYMDVIGK-LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGR-IPLDW 456
+D+ + + P V + +E + + L + SL G+ IP D
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALF-REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDI 137
Query: 457 TTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS-LLLNPVQ 515
+I++ + + L +H + V H +VK SNVL++ G DFG+S L++ V
Sbjct: 138 LGKIAVSI--VKALEHLHSKLS---VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA 192
Query: 516 AIARLGG--YKAPE----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
G Y APE + K S K+D++S G+ +E+ R P
Sbjct: 193 KDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKE 398
Y K +F +L + LG G+ G V +A +D + VAVK LK KE
Sbjct: 22 YNEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 79
Query: 399 -FEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSL--------HSLLHGNRG 448
+ ++ L +H N+V L L++ +Y G L ++L +
Sbjct: 80 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLA 139
Query: 449 PGRIP----------LDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNG 498
PG+ P L+ + A+G+A + + H +V + NVLL
Sbjct: 140 PGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGH 195
Query: 499 VACISDFGLSL-LLNP----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
VA I DFGL+ ++N V+ ARL + APE + ++DV+S+G+LL E+ +
Sbjct: 196 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRG-PGRIPLDWTTRISLVLGAARG 469
HP +V L + + + V +Y+ G L + R P ++ ISL L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKA 525
I++ ++K NVLLD G ++D+G+ L P + G Y A
Sbjct: 172 RGIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + D ++ GVL+ E++ GR+P
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 16/155 (10%)
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGL 470
HPN+VKL ++ + LV + L G L + + + R +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAV 119
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLL----NPVQAIARLGGY 523
+ +H V H ++K N+L + N I DFG + L P++ Y
Sbjct: 120 SHMHD----VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHY 175
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
APE + D++S GV+L +L+G+ P Q
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 31/208 (14%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDAN--------PCARKEFEQYMDVIGKLKHPNV 414
+G G+ GTVYKA G VA+K ++ N P + + + +HPNV
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 415 VKLRAYYYA----KEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
V+L +E K+ LV++++ + L + L PG L T L+ RG
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRG 132
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS------LLLNPVQAIARLGGY 523
L +H + H ++K N+L+ G ++DFGL+ + L PV Y
Sbjct: 133 LDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTL---WY 185
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVL 551
+APE + D++S G + E+
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDAN-----PCARKEFEQYMDVIGKLKHPNVVKL 417
+G G+ GTVYKA G VA+K ++ N P + + + +HPNVV+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 418 RAYYYA----KEEKL-LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+E K+ LV++++ + L + L PG L T L+ RGL
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG---GYKAPEQA 529
+H + H ++K N+L+ G ++DFGL+ + + A+ + Y+APE
Sbjct: 128 LHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 530 EVKRLSQKADVYSFGVLLLEVL 551
+ D++S G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMF 205
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 398 EFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSL-----HSLLHGNRGPGRI 452
+F+ + +I +K+ + +E ++Y+Y+ N S+ + + I
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 453 PLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN 512
P+ ++ + IH E + H +VK SN+L+DKNG +SDFG S +
Sbjct: 149 PIQVIK--CIIKSVLNSFSYIHNE---KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 513 PVQAIARLGGYKA--PE--QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ G Y+ PE E K D++S G+ L + P
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRG-PGRIPLDWTTRISLVLGAARG 469
HP +V L + + + V +Y+ G L + R P ++ ISL L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKA 525
I++ ++K NVLLD G ++D+G+ L P + G Y A
Sbjct: 129 RGIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + D ++ GVL+ E++ GR+P
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRG-PGRIPLDWTTRISLVLGAARG 469
HP +V L + + + V +Y+ G L + R P ++ ISL L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLL-LNPVQAIARLGG---YKA 525
I++ ++K NVLLD G ++D+G+ L P + G Y A
Sbjct: 125 RGIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
PE + D ++ GVL+ E++ GR+P
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
+G GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 25/208 (12%)
Query: 362 EMLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVV 415
E LGKG+ V + V I+ K+L + ++ E+ + LKHPN+V
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD---HQKLEREARICRLLKHPNIV 93
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+L + LV+D + G L + D + I +L + IHQ
Sbjct: 94 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHCIHQIL---ESVNHIHQ 148
Query: 476 EYGTAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQ 528
+ H ++K N+LL K ++DFGL++ + Q A GY +PE
Sbjct: 149 H----DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ D+++ GV+L +L G P
Sbjct: 205 LRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 347 RKKQFELEDLLRASAEM---------LGKGSLGTVYKAVLDDGG-IVAVKRLK---DANP 393
RKK F +D+ + + E+ +G G+ G+V A+ G VA+K+L +
Sbjct: 24 RKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 83
Query: 394 CARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYD-YLPNGSLHSLLHGNRGPGRI 452
A++ + + + ++ ++H NV+ L + YD YL + + L G +
Sbjct: 84 FAKRAYRELL-LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG---M 139
Query: 453 PLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN 512
LV +GL IH +A V H ++K N+ ++++ I DFGL+
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--- 192
Query: 513 PVQAIARLGGY------KAPEQA-EVKRLSQKADVYSFGVLLLEVLTGRA 555
A A + GY +APE +Q D++S G ++ E+LTG+
Sbjct: 193 --HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 347 RKKQFELEDLLRASAEM---------LGKGSLGTVYKAVLDDGG-IVAVKRLK---DANP 393
RKK F +D+ + + E+ +G G+ G+V A+ G VA+K+L +
Sbjct: 6 RKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 65
Query: 394 CARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYD-YLPNGSLHSLLHGNRGPGRI 452
A++ + + + ++ ++H NV+ L + YD YL + + L G +
Sbjct: 66 FAKRAYRELL-LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG---L 121
Query: 453 PLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN 512
LV +GL IH +A V H ++K N+ ++++ I DFGL+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--- 174
Query: 513 PVQAIARLGGY------KAPEQA-EVKRLSQKADVYSFGVLLLEVLTGRA 555
A A + GY +APE +Q D++S G ++ E+LTG+
Sbjct: 175 --HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 25/229 (10%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKE 398
Y K +F +L + LG G+ G V +A +D + VAVK LK KE
Sbjct: 37 YNEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 399 -FEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDW 456
+ ++ L +H N+V L L++ +Y G L + L R + D
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR--RKSRVLETDP 152
Query: 457 TTRISLVLGAARGLARIHQE-------YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL 509
I+ + R L + + H +V + NVLL VA I DFGL+
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 510 -LLNP----VQAIARL-GGYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
++N V+ ARL + APE + ++DV+S+G+LL E+ +
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 401 QYMDVIGKLKHPNVVKLRAYYYAKEEKLL--VYDYLPNGSLHSLLHGNRGPGRIPLDWTT 458
Q + ++ KL HPNVVKL E L V++ + G + + P PL
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSEDQ 138
Query: 459 RISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--------LL 510
+G+ +H + K+ H ++K SN+L+ ++G I+DFG+S LL
Sbjct: 139 ARFYFQDLIKGIEYLHYQ----KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 511 LNPVQAIARLGGYKAPEQAEVKR--LSQKA-DVYSFGVLLLEVLTGRAP 556
N V A + APE R S KA DV++ GV L + G+ P
Sbjct: 195 SNTVGTPA----FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 19/226 (8%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + V + G A K + AR ++ E+ + LKHPN+V+L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ L++D + G L + D + I +L A + HQ
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA---VLHCHQ--- 139
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAEV 531
V H ++K N+LL K ++DFGL++ + Q A GY +PE
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
+ D+++ GV+L +L G P R + A D P
Sbjct: 199 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+++D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 159 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 382 IVAVKRLKD---ANPCARKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGS 438
IVA+K + ++P R ++ G+L+ P+VV + + + +L V L NG
Sbjct: 61 IVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGV 119
Query: 439 LHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNG 498
+ +GP P + R + A H +VK N+L+ +
Sbjct: 120 DLAAXLRRQGPLAPPR--------AVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD 171
Query: 499 VACISDFGLSLLLNPVQAIARLGG------YKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
A + DFG++ + + +LG Y APE+ + +AD+Y+ +L E LT
Sbjct: 172 FAYLVDFGIASATTD-EKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLT 230
Query: 553 GRAPSQ 558
G P Q
Sbjct: 231 GSPPYQ 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 187 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+P G + S L R GR + +I L L I++
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 159 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 108
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + +L L+ LL L + RGL IH
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 161
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 162 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+++D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKR-------------LKDANPCARKEFEQYMDVIGKL 409
+ GS G V V +G VA+KR L D+ C R E + ++
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE--IRLLNHF 86
Query: 410 KHPNVVKLRAYYYAKEE----KLLVYDYLPNGSLHSLLHGNR---GPGRIPLDWTTRISL 462
HPN++ LR + EE KL + L L ++H R P I + I L
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-FMYHILL 145
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL----SLLLNPVQAIA 518
GL +H+ A V H ++ N+LL N I DF L + N +
Sbjct: 146 ------GLHVLHE----AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 519 RLGGYKAPEQA-EVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE + K ++ D++S G ++ E+ +A
Sbjct: 196 H-RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+++D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 363 MLGKGSLGTVYKAVLDDGGIVAVKR-------------LKDANPCARKEFEQYMDVIGKL 409
+ GS G V V +G VA+KR L D+ C R E + ++
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE--IRLLNHF 86
Query: 410 KHPNVVKLRAYYYAKEE----KLLVYDYLPNGSLHSLLHGNR---GPGRIPLDWTTRISL 462
HPN++ LR + EE KL + L L ++H R P I + I L
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-FMYHILL 145
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL----SLLLNPVQAIA 518
GL +H+ A V H ++ N+LL N I DF L + N +
Sbjct: 146 ------GLHVLHE----AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 519 RLGGYKAPEQA-EVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE + K ++ D++S G ++ E+ +A
Sbjct: 196 H-RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 363 MLGKGSLGTVYKAVLDDGG---IVAVKRLKDANPCARKEFEQYM---DVIGKL-KHPNVV 415
+LGKGS G V A D G + A+K LK + E M V+ L K P +
Sbjct: 26 VLGKGSFGKVMLA--DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-GPGRIP--LDWTTRISLVLGAARGLAR 472
+L + + + V +Y+ G L + H + G + P + + IS+ GL
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISI------GLFF 135
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL--SLLLNPVQAIARLG--GYKAPEQ 528
+H+ + + ++K NV+LD G I+DFG+ +++ V G Y APE
Sbjct: 136 LHKR----GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ + D +++GVLL E+L G+ P
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 144
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 145 ----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYK 524
GL +HQ + + ++K NVLLD +G ISD GL++ L Q A G+
Sbjct: 301 GLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
APE + D ++ GV L E++ R P
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYK 524
GL +HQ + + ++K NVLLD +G ISD GL++ L Q A G+
Sbjct: 301 GLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
APE + D ++ GV L E++ R P
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYK 524
GL +HQ + + ++K NVLLD +G ISD GL++ L Q A G+
Sbjct: 301 GLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 525 APEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
APE + D ++ GV L E++ R P
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 363 MLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYM---DVIGKLKHPNVVKLR 418
+LG+G G V+ + G + A K+L RK ++ M ++ K+ +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHG--NRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
+ K + LV + G + ++ PG I GL +HQ
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG---FQEPRAIFYTAQIVSGLEHLHQR 308
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAEVK 532
+ + ++K NVLLD +G ISD GL++ L Q A G+ APE +
Sbjct: 309 ----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 533 RLSQKADVYSFGVLLLEVLTGRAP 556
D ++ GV L E++ R P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 362 EMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVV 415
E++GKG+ V + + + G IV V + + + ++ ++ + LKHP++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 416 KLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+L Y + +V++++ L + G + ++ R + +
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG-----FVYSEAVASHYMRQILEALR 144
Query: 476 EYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIA--RLGG--YKAPEQ 528
+ H +VK NVLL + + + DFG+++ L +A R+G + APE
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ + + DV+ GV+L +L+G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 148
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 149 ----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 147
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 148 ----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAVL-----DDGGI-VAVKRLKDANPCARKE 398
Y K +F +L + LG G+ G V +A +D + VAVK LK KE
Sbjct: 37 YNEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 399 -FEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR-----GPGR 451
+ ++ L +H N+V L L++ +Y G L + L P
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF 154
Query: 452 IPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL-L 510
+ T +L + +A+ + H +V + NVLL VA I DFGL+ +
Sbjct: 155 AIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 511 LNP----VQAIARLG-GYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
+N V+ ARL + APE + ++DV+S+G+LL E+ +
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 149
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS-LLLNPVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 150 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 16/84 (19%)
Query: 484 HGNVKSSNVLLDKNGVACISDFGL----------SLLLNPVQAIARLGG------YKAPE 527
H ++K SN+ + V + DFGL +L P+ A A G Y +PE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE 246
Query: 528 QAEVKRLSQKADVYSFGVLLLEVL 551
Q S K D++S G++L E+L
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 149
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS-LLLNPVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 150 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY-AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ A+ + YL + + L+ ++ D L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQ--FLIYQILRGLKYIH---- 142
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVKRLSQ 536
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE +Q
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 537 KADVYSFGVLLLEVLTGRA 555
D++S G ++ E+LTGR
Sbjct: 203 TVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 147
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 148 ----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 147
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 148 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 88
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 141
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 87
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 141
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 142 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 197
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPC---ARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L A++ + + + ++ +KH NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 154
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 155 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 149
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS-LLLNPVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 150 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 144
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 145 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 144
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 145 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 154
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 155 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 154
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 155 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA-IARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + A
Sbjct: 130 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVAT 185
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 88
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 141
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 165
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 166 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWM 221
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 153
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 154 ----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 144
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 145 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+ +G+G+ G V A VA+K++ + C R E + ++ + +H NV+ +
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLRE--IQILLRFRHENVIGI 106
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
R A + + Y+ + + L+ ++ D + RGL IH
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHIC--YFLYQILRGLKYIH--- 161
Query: 478 GTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE-QA 529
+A V H ++K SN+L++ I DFGL+ + +P + Y+APE
Sbjct: 162 -SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA-IARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + A
Sbjct: 130 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVAT 185
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 90
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 143
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 96
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 149
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 150 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 88
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 141
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 30/236 (12%)
Query: 345 YERKKQFELEDLLRASAEMLGKGSLGTVYKAV---LDDGGI---VAVKRLKD-ANPCARK 397
Y+ K +F E+L ++LG G+ G V A + G+ VAVK LK+ A+ R+
Sbjct: 36 YDLKWEFPRENL--EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE 93
Query: 398 EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNR---GPGRIP 453
+ ++ +L H N+V L L+++Y G L + L R I
Sbjct: 94 ALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIE 153
Query: 454 LDWTTRISL-----------VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACI 502
+ R+ +L A +A+ + H ++ + NVL+ V I
Sbjct: 154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKI 213
Query: 503 SDFGLSLLLNP-----VQAIARL-GGYKAPEQAEVKRLSQKADVYSFGVLLLEVLT 552
DFGL+ + V+ ARL + APE + K+DV+S+G+LL E+ +
Sbjct: 214 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 153
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 154 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 162
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 163 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 165
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 166 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 221
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 149
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 150 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 205
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 161
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 162 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 148
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 149 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 88
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 141
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 108
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 161
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 162 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 138
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 139 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 139
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 140 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 92
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 145
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 86
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 139
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 140 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 93
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 146
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 147 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 94
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 147
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 148 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 85
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 138
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 139 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 92
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 145
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 139
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 140 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 147
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 148 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 88
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 141
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 86
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 139
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 140 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 363 MLGKGSLGTVY---KAVLDDGGIVAVKRLK-------DANPCARKEFEQYMDVIGKLKHP 412
+LGKGS G V + D+ + AVK LK D C E ++ + + GK P
Sbjct: 348 VLGKGSFGKVMLSERKGTDE--LYAVKILKKDVVIQDDDVECTMVE-KRVLALPGK--PP 402
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHG---NRGPGRIPLDWTTRISLVLGAARG 469
+ +L + + + V +Y+ G L + + P + I L ++G
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIARLG--GYKA 525
+ + ++K NV+LD G I+DFG+ + + V G Y A
Sbjct: 463 II------------YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 510
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
PE + + D ++FGVLL E+L G+AP +
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 92
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 145
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA-IARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + A
Sbjct: 126 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVAT 181
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 93
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH- 146
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 147 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 148
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 149 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 362 EMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKE---FEQYMDVIGKLKHPNVVKL 417
+++G+G+ V + G + A+K + + R E F + DV+ + +L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 418 RAYYYAKEEKLLVYDYLPNGSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
+ + LV +Y G L +LL G R P + + I + + + L +H+
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLL---NPVQAIARLG--GYKAPEQAE 530
++K N+LLD+ G ++DFG L L V+++ +G Y +PE +
Sbjct: 187 ----------DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 531 V-------KRLSQKADVYSFGVLLLEVLTGRAP 556
+ D ++ GV E+ G+ P
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRL---KDANPCARKEFEQYMDVIGKLKHPNVVKL-- 417
+G+G+ G V A + + VA+K++ + C R E + ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND 92
Query: 418 --RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQ 475
RA + + + + L L+ LL L + RGL IH
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH------LSNDHICYFLYQILRGLKYIH- 145
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE- 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARL 520
RGL IH +A V H ++K SN+LL+ I DFGL+ + +P +
Sbjct: 137 RGLKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE K ++ D++S G +L E+L+ R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 86
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 140
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 141 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 196
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + +A Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKDANPCARKEFEQY----MDVIGKLKHPNVVKL- 417
+G+G+ G V A + + VA+K++ +P + + Q + ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 418 ---RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
RA + + + + L L+ LL L + RGL IH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH 145
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE 527
+A V H ++K SN+LL+ I DFGL+ + +P + Y+APE
Sbjct: 146 ----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 528 -QAEVKRLSQKADVYSFGVLLLEVLTGR 554
K ++ D++S G +L E+L+ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGKLKHPNVVKLR 418
E +GKG+ V + V L G A K + AR ++ E+ + LKH N+V+L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + D + I +L A + HQ
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA---VLHCHQ--- 121
Query: 479 TAKVPHGNVKSSNVLLD---KNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAEV 531
V H ++K N+LL K ++DFGL++ + Q A GY +PE
Sbjct: 122 -MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+ + D+++ GV+L +L G P
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P + KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+++D+ G ++DFG + + + Y APE K
Sbjct: 167 D----------LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P + KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+++D+ G ++DFG + + + Y APE K
Sbjct: 167 D----------LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI---VAVKRLKDANPCARKEFEQYMDVIGKLKHP------ 412
+++GKGS G V KA D + VA+K +++ R+ E+ + ++ L+
Sbjct: 103 KVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEE-IRILEHLRKQDKDNTM 159
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ + + + + ++ L + +L+ L+ N+ G + LV A + +
Sbjct: 160 NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG-------FSLPLVRKFAHSILQ 211
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACIS--DFGLSLLLNP-VQAIARLGGYKAPEQA 529
++ H ++K N+LL + G + I DFG S + V + Y+APE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQ 572
R D++S G +L E+LTG P P DE +Q
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTG-------YPLLPGEDEGDQ 307
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 111/286 (38%), Gaps = 46/286 (16%)
Query: 360 SAEMLGKGSLGTVYKAVLDDGGI-VAVKRLKD---ANPCARKEFEQYMDVIGKLKH-PNV 414
+++ LG+G V + + G A K LK C R E + V+ K P V
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDC-RAEILHEIAVLELAKSCPRV 91
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ L Y E +L+ +Y G + SL D I L+ G+ +H
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND---VIRLIKQILEGVYYLH 148
Query: 475 QEYGTAKVPHGNVKSSNVLLDKN---GVACISDFGLSLLLNPVQAIARLGG---YKAPEQ 528
Q + H ++K N+LL G I DFG+S + + + G Y APE
Sbjct: 149 QN----NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEI 204
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEW 588
++ D+++ G++ +LT T P V E+ Q L S V ++
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTH---------TSPFVGEDNQETYLNI---SQVNVDY 252
Query: 589 TAEVFDQELLRYKNIEEELVSMLHVGL--ACVVSQPEKRPTMAEVA 632
+ E F VS L + +V PEKRPT AE+
Sbjct: 253 SEETFSS------------VSQLATDFIQSLLVKNPEKRPT-AEIC 285
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 30/249 (12%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
AE LG+G G V++ V + + + ++ + ++ +H N++ L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 421 YYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTA 480
+ + EE +++++++ + + L+ +S V L +H +
Sbjct: 70 FESMEELVMIFEFISGLDIFERI----NTSAFELNEREIVSYVHQVCEALQFLH----SH 121
Query: 481 KVPHGNVKSSNVLLD--KNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVKRLS 535
+ H +++ N++ ++ I +FG + L P L Y APE + +S
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 536 QKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQ 595
D++S G L+ +L+G P + + T ++ + +++ E+T FD+
Sbjct: 182 TATDMWSLGTLVYVLLSGINP--FLAETNQQI------------IENIMNAEYT---FDE 224
Query: 596 ELLRYKNIE 604
E + +IE
Sbjct: 225 EAFKEISIE 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V ++ G A+K L K+ E ++ ++ + P + KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+++D+ G ++DFG + + + Y APE K
Sbjct: 167 D----------LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+++D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 363 MLGKGSLGTVY---KAVLDDGGIVAVKRLK-------DANPCARKEFEQYMDVIGKLKHP 412
+LGKGS G V + D+ + AVK LK D C E ++ + + GK P
Sbjct: 27 VLGKGSFGKVMLSERKGTDE--LYAVKILKKDVVIQDDDVECTMVE-KRVLALPGK--PP 81
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHG---NRGPGRIPLDWTTRISLVLGAARG 469
+ +L + + + V +Y+ G L + + P + I L ++G
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSL--LLNPVQAIARLG--GYKA 525
+ + ++K NV+LD G I+DFG+ + + V G Y A
Sbjct: 142 II------------YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 526 PEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
PE + + D ++FGVLL E+L G+AP +
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI---VAVKRLKDANPCARKEFEQYMDVIGKLKHP------ 412
+++GKGS G V KA D + VA+K +++ R+ E+ + ++ L+
Sbjct: 103 KVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEE-IRILEHLRKQDKDNTM 159
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ + + + + ++ L + +L+ L+ N+ G + LV A + +
Sbjct: 160 NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG-------FSLPLVRKFAHSILQ 211
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACIS--DFGLSLLLNP-VQAIARLGGYKAPEQA 529
++ H ++K N+LL + G + I DFG S + V + Y+APE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQ 572
R D++S G +L E+LTG P P DE +Q
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTG-------YPLLPGEDEGDQ 307
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV RGL IH +A + H ++K SNV ++++ I DFGL+ QA +
Sbjct: 136 LVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMT 186
Query: 522 G------YKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
G Y+APE +Q D++S G ++ E+L G+A
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV RGL IH +A + H ++K SNV ++++ I DFGL+ QA +
Sbjct: 136 LVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMT 186
Query: 522 G------YKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
G Y+APE +Q D++S G ++ E+L G+A
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 34/163 (20%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRL-----KDANP-CARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA G VA+K++ K+ P A +E + ++ LKH NVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVVN 81
Query: 417 L--------RAYYYAKEEKLLVYDYLPN---GSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
L Y K LV+D+ + G L ++L + L R+ +L
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQML- 134
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS 508
GL IH+ K+ H ++K++NVL+ ++GV ++DFGL+
Sbjct: 135 -LNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 26/212 (12%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEVK 532
++K N+L+D+ G ++DFG + + A L G Y APE K
Sbjct: 187 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKG--ATWTLCGTPEYLAPEIILSK 234
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + +
Sbjct: 140 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 195
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + +
Sbjct: 130 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 185
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 420 YYY-AKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ A+ + YL + + L+ ++ D L+ RGL IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQ--FLIYQILRGLKYIH---- 138
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVKRLSQ 536
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE +Q
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 537 KADVYSFGVLLLEVLTGRA 555
D++S G ++ E+LTGR
Sbjct: 199 TVDIWSVGCIMAELLTGRT 217
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + +
Sbjct: 136 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 191
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARL 520
RGL IH +A V H ++K SN+LL+ I DFGL+ + +P +
Sbjct: 137 RGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE K ++ D++S G +L E+L+ R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 116/305 (38%), Gaps = 70/305 (22%)
Query: 348 KKQFELEDLLRASAEMLGKGSLGTVYKA-VLDDGGIVAVK-----------RLKDANPCA 395
++ FE E L +LGKG GTV+ L D VA+K L D+ C
Sbjct: 26 REAFEAEYRL---GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 396 RKEFEQYMDVIGKLKHPNVVKLRAYYYAKEEKLLVYDY-LPNGSLHSLLHGN----RGPG 450
E V HP V++L ++ +E +LV + LP L + GP
Sbjct: 83 L-EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS 141
Query: 451 RIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLD-KNGVACISDFGLSL 509
R V+ A Q + V H ++K N+L+D + G A + DFG
Sbjct: 142 R------CFFGQVVAAI-------QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGA 188
Query: 510 LLN--PVQAIARLGGYKAPEQAEVKRL-SQKADVYSFGVLLLEVLTGRAPSQYPSPTRPR 566
LL+ P Y PE + + A V+S G+LL +++ G P
Sbjct: 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF--------- 239
Query: 567 VDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRP 626
E +Q E+ + EL ++ + +++ C+ +P RP
Sbjct: 240 --ERDQ------------------EILEAELHFPAHVSPDCCALIR---RCLAPKPSSRP 276
Query: 627 TMAEV 631
++ E+
Sbjct: 277 SLEEI 281
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 468 RGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARL 520
RGL IH +A V H ++K SN+LL+ I DFGL+ + +P +
Sbjct: 139 RGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
Y+APE K ++ D++S G +L E+L+ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 34/163 (20%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRL-----KDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA G VA+K++ K+ P A +E + ++ LKH NVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVVN 81
Query: 417 L--------RAYYYAKEEKLLVYDYLPN---GSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
L Y K LV+D+ + G L ++L + L R+ +L
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQML- 134
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS 508
GL IH+ K+ H ++K++NVL+ ++GV ++DFGL+
Sbjct: 135 -LNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 352 ELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRL-KDANPCARKEFEQYMDVIGKL 409
+ ED+ + ++E+LG+G+ V AV L +G AVK + K A + F + +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+ N+++L ++ LV++ L GS+ + + + + +V A
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK-----HFNEREASRVVRDVAAA 123
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDKNGVA-----CISDFGLSLLLN----PV---QAI 517
L +H T + H ++K N+L + C D G + LN P+ +
Sbjct: 124 LDFLH----TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 518 ARLGG--YKAPEQAEV-----KRLSQKADVYSFGVLLLEVLTGRAP 556
G Y APE EV ++ D++S GV+L +L+G P
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + +
Sbjct: 126 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 181
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + +
Sbjct: 150 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 205
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 162
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 163 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWM 218
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 161
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I DFGL+ + + Y+APE
Sbjct: 162 ----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I D+GL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLG 521
LV RGL IH +A + H ++K SNV ++++ I DFGL+ QA +
Sbjct: 128 LVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMT 178
Query: 522 G------YKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
G Y+APE +Q D++S G ++ E+L G+A
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 34/163 (20%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRL-----KDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA G VA+K++ K+ P A +E + ++ LKH NVV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVVN 80
Query: 417 L--------RAYYYAKEEKLLVYDYLPN---GSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
L Y K LV+D+ + G L ++L + L R+ +L
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQML- 133
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS 508
GL IH+ K+ H ++K++NVL+ ++GV ++DFGL+
Sbjct: 134 -LNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 34/163 (20%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRL-----KDANPC-ARKEFEQYMDVIGKLKHPNVVK 416
+G+G+ G V+KA G VA+K++ K+ P A +E + ++ LKH NVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVVN 81
Query: 417 L--------RAYYYAKEEKLLVYDYLPN---GSLHSLLHGNRGPGRIPLDWTTRISLVLG 465
L Y K LV+D+ + G L ++L + L R+ +L
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQML- 134
Query: 466 AARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS 508
GL IH+ K+ H ++K++NVL+ ++GV ++DFGL+
Sbjct: 135 -LNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 187 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query: 380 GGIVAVKRLKDANPCARK--EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPN 436
G V V+R+ + C+ + F Q + KL HPN+V RA + A E +V ++
Sbjct: 36 GEYVTVRRI-NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 94
Query: 437 GSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLL 494
GS L+ H G + + + ++ G + L IH H +VK+S++L+
Sbjct: 95 GSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH----MGYVHRSVKASHILI 145
Query: 495 DKNGVACISDF--GLSLLLN----------PVQAIARLGGYKAPE--QAEVKRLSQKADV 540
+G +S LS++ + P ++ L + +PE Q ++ K+D+
Sbjct: 146 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL-PWLSPEVLQQNLQGYDAKSDI 204
Query: 541 YSFGVLLLEVLTGRAP 556
YS G+ E+ G P
Sbjct: 205 YSVGITACELANGHVP 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 161 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 210
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP----LDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ + + P +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y P G + S L R GR + +I L L I++
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 167 ----------DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + + + G A K + AR ++ E+ + LKHPN+V+L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + + ++ + + L ++ +
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI--------VAREYYSEADASHCIQQILESVNHCHL 121
Query: 479 TAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAEV 531
V H ++K N+LL K ++DFGL++ + Q A GY +PE
Sbjct: 122 NGIV-HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAP 556
+ D+++ GV+L +L G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query: 380 GGIVAVKRLKDANPCARK--EFEQYMDVIGKL-KHPNVVKLRAYYYAKEEKLLVYDYLPN 436
G V V+R+ + C+ + F Q + KL HPN+V RA + A E +V ++
Sbjct: 52 GEYVTVRRI-NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110
Query: 437 GSLHSLL--HGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLL 494
GS L+ H G + + + ++ G + L IH H +VK+S++L+
Sbjct: 111 GSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHH----MGYVHRSVKASHILI 161
Query: 495 DKNGVACISDF--GLSLLLN----------PVQAIARLGGYKAPE--QAEVKRLSQKADV 540
+G +S LS++ + P ++ L + +PE Q ++ K+D+
Sbjct: 162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL-PWLSPEVLQQNLQGYDAKSDI 220
Query: 541 YSFGVLLLEVLTGRAP 556
YS G+ E+ G P
Sbjct: 221 YSVGITACELANGHVP 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DFGL+ + +
Sbjct: 159 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 214
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE + D++S G ++ E+LTGR
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 362 EMLGKGSLGTVYKAVLDDGGI---VAVKRLKDANPCARKEFEQYMDVIGKLKHP------ 412
+++GKG G V KA D + VA+K +++ R+ E+ + ++ L+
Sbjct: 103 KVIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEE-IRILEHLRKQDKDNTM 159
Query: 413 NVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
NV+ + + + + ++ L + +L+ L+ N+ G + LV A + +
Sbjct: 160 NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG-------FSLPLVRKFAHSILQ 211
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACIS--DFGLSLLLNP-VQAIARLGGYKAPEQA 529
++ H ++K N+LL + G + I DFG S + V + Y+APE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVI 271
Query: 530 EVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQ 572
R D++S G +L E+LTG P P DE +Q
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTG-------YPLLPGEDEGDQ 307
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 153 ----------DLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 19/226 (8%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCAR--KEFEQYMDVIGKLKHPNVVKLR 418
E LGKG+ V + + + G A K + AR ++ E+ + LKHPN+V+L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
+ LV+D + G L + + ++ + + L ++ +
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI--------VAREYYSEADASHCIQQILESVNHCHL 121
Query: 479 TAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQ----AIARLGGYKAPEQAEV 531
V H ++K N+LL K ++DFGL++ + Q A GY +PE
Sbjct: 122 NGIV-HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLP 577
+ D+++ GV+L +L G P R + A D P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 362 EMLGKGSLGTVYKAV-LDDGGIVAVKRLKDAN------PCARKEFEQYMDVIGKLKHPNV 414
E +G G V A + G +VA+K + D N P + E E + L+H ++
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIE----ALKNLRHQHI 70
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+L + +V +Y P G L + R+ + T + + +A +A +H
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVVFRQIVSA--VAYVH 125
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNP-------VQAIARLGGYKAPE 527
+ G A H ++K N+L D+ + DFGL P +Q Y APE
Sbjct: 126 SQ-GYA---HRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQTCCGSLAYAAPE 179
Query: 528 QAEVKR-LSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWV 580
+ K L +ADV+S G+LL ++ G P + D+PKW+
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWL 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 119/301 (39%), Gaps = 74/301 (24%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
+LG+G+ G V KA D A+K+++ + M ++ L H VV+ Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVM-LLASLNHQYVVR----Y 67
Query: 422 YA----------------KEEKLLV-YDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
YA K+ L + +Y NG+L+ L+H + W L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYK 524
L+ IH + + H ++K N+ +D++ I DFGL+ ++ I +L
Sbjct: 124 QILEALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 525 APEQAE-------------------VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRP 565
P ++ ++K D+YS G++ E++ YP T
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-------YPFSTGM 232
Query: 566 RVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKR 625
+ V++ K +RSV E FD ++ +E++++ +L + P KR
Sbjct: 233 ------ERVNILKKLRSVSIE--FPPDFDDNKMK---VEKKIIRLL------IDHDPNKR 275
Query: 626 P 626
P
Sbjct: 276 P 276
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 353 LEDLLRASAEMLGKGSLGTVYKAVLDDGGIVAVKRLKDANPCARKEFEQYMD-------- 404
L D +E LG+G+ VY+ K+ P A K ++ +D
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRC----------KQKGTQKPYALKVLKKTVDKKIVRTEI 99
Query: 405 -VIGKLKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHS-LLHGNRGPGRIPLDWTTRISL 462
V+ +L HPN++KL+ + E LV + + G L ++ R D +I
Sbjct: 100 GVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI-- 157
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGLSLLLNP---VQA 516
+A +H+ + H ++K N+L + I+DFGLS ++ ++
Sbjct: 158 ----LEAVAYLHEN----GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209
Query: 517 IARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ GY APE + D++S G++ +L G P
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 352 ELEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLK 410
EL +L +L +G VY+A + G A+KRL + Q + + KL
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 411 -HPNVVKL-RAYYYAKEE------KLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISL 462
HPN+V+ A KEE + L+ L G L L + R PL T + +
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRGPLSCDTVLKI 141
Query: 463 VLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFG 506
R + +H++ + H ++K N+LL G + DFG
Sbjct: 142 FYQTCRAVQHMHRQ--KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
++K N+++D+ G ++DFG + + + Y APE K
Sbjct: 166 ----------DLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I FGL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 11/143 (7%)
Query: 24 NDTDALTLFRLQTDTHGN--LLSNW-KGADACAAAWTGVVCSPKSE--RVVSLSLPSHSL 78
N D L +++ D GN LS+W D C W GV+C ++ RV +L L +L
Sbjct: 4 NPQDKQALLQIKKDL-GNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 79 RGPI-APXXXXXXXXXXXXXXNRLNGTILP----LTNCTNLKLAYLSGNDFSAEIPHQIS 133
P P +N + P + T L Y++ + S IP +S
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 134 SLKGILRLDLSDNNIRGRIPEQV 156
+K ++ LD S N + G +P +
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSI 145
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 3/132 (2%)
Query: 99 NRLNGTILPLTNCTNLKLAYLSGNDFSAEIPHQISSLKGILRLDLSDNNIRGRIPEQVXX 158
NRL G I P NL LS N + S K ++ L+ N++ + +V
Sbjct: 184 NRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGL 242
Query: 159 XXXXXXXXXXXXXXXGRIPXXXXXXXXXXXXXXXXXXXYGRVPEG-LLKKFGEQSFIGNE 217
G +P G +P+G L++F ++ N+
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302
Query: 218 GLCGSSPLPACS 229
LCGS PLPAC+
Sbjct: 303 CLCGS-PLPACT 313
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y APE K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ ++ G P P +
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I D GL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 462 LVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARL 520
L+ RGL IH +A + H ++K SN+ ++++ I DF L+ + +
Sbjct: 130 LIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVAT 185
Query: 521 GGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGRA 555
Y+APE +Q D++S G ++ E+LTGR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I D GL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 363 MLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVK 416
LGKG ++ D G IV L P R++ + + L H +VV
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ + +V + SL L H R P +VLG Q
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGC--------QY 130
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVK 532
+V H ++K N+ L+++ I DFGL+ + + + Y APE K
Sbjct: 131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSV 583
S + DV+S G ++ +L G+ P + + ++ +PK + V
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 363 MLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVK 416
LGKG ++ D G IV L P R++ + + L H +VV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ + +V + SL L H R P +VLG Q
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGC--------QY 132
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVK 532
+V H ++K N+ L+++ I DFGL+ + + + Y APE K
Sbjct: 133 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSV 583
S + DV+S G ++ +L G+ P + + ++ +PK + V
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 243
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 363 MLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVK 416
LGKG ++ D G IV L P R++ + + L H +VV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ + +V + SL L H R P +VLG Q
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGC--------QY 132
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVK 532
+V H ++K N+ L+++ I DFGL+ + + + Y APE K
Sbjct: 133 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSV 583
S + DV+S G ++ +L G+ P + + ++ +PK + V
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 243
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLK---DANPCARKEFEQYMDVIGKLKHPNVVKLRA 419
+G G+ G+V A G+ VAVK+L + A++ + + + ++ +KH NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 420 YYY---AKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY +L L++++ + L L+ RGL IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK------LTDDHVQFLIYQILRGLKYIH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPE-QAEVK 532
+A + H ++K SN+ ++++ I D GL+ + + Y+APE
Sbjct: 143 ----SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 533 RLSQKADVYSFGVLLLEVLTGRA 555
+Q D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 363 MLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVK 416
LGKG ++ D G IV L P R++ + + L H +VV
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ + +V + SL L H R P +VLG Q
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGC--------QY 154
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVK 532
+V H ++K N+ L+++ I DFGL+ + + + Y APE K
Sbjct: 155 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSV 583
S + DV+S G ++ +L G+ P + + ++ +PK + V
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 265
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 363 MLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVK 416
LGKG ++ D G IV L P R++ + + L H +VV
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ + +V + SL L H R P +VLG Q
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGC--------QY 136
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVK 532
+V H ++K N+ L+++ I DFGL+ + + + Y APE K
Sbjct: 137 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSV 583
S + DV+S G ++ +L G+ P + + ++ +PK + V
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 247
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI-------QMELDHERMSYLLYQMLVGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S GV++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
L+HPN+V+ + ++ +Y G L+ + GR D L +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLS-- 127
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVA--CISDFGL---SLLLNPVQAIARLGGY 523
G++ H + ++ H ++K N LLD + I DFG S+L + ++ Y
Sbjct: 128 GVSYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 183
Query: 524 KAPEQAEVKRLSQK-ADVYSFGVLLLEVLTGRAPSQYPSPTRPR 566
APE + K ADV+S GV L +L G P + P PR
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP--FEDPEEPR 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG Y+ +D + A K + + P +++ + + L +P+VV
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ E+ VY L SLL ++ R + + +G+ +H
Sbjct: 109 GFF---EDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVKRL 534
+V H ++K N+ L+ + I DFGL+ + + + Y APE K
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQ 558
S + D++S G +L +L G+ P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 363 MLGKGSLGTVYKAVLDD------GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVK 416
LGKG ++ D G IV L P R++ + + L H +VV
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQE 476
++ + +V + SL L H R P +VLG Q
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGC--------QY 156
Query: 477 YGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVK 532
+V H ++K N+ L+++ I DFGL+ + + + Y APE K
Sbjct: 157 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 533 RLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSV 583
S + DV+S G ++ +L G+ P + + ++ +PK + V
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 267
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDAN-PCARKE 398
K + Y F+L+ LL G+G+ G V A G IVA+K+++ + P
Sbjct: 3 KRIVYNISSDFQLKSLL-------GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR 55
Query: 399 FEQYMDVIGKLKHPNVVKL----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPL 454
+ + ++ KH N++ + R + ++ + L LH ++ L
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM------L 109
Query: 455 DWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPV 514
+ R + +H + V H ++K SN+L++ N + DFGL+ +++
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 515 QA--------------IARLGGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
A Y+APE + S+ DV+S G +L E+ R
Sbjct: 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 364 LGKGSLGTVYKAVLDD-GGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
LG G G V+ AV +D VA+K++ +P + K + + +I +L H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 423 AKEEKL--------------LVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
+L +V +Y+ + L +GP L+ R+ + R
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGP---LLEEHARL-FMYQLLR 131
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLD-KNGVACISDFGLSLLLNP-------VQAIARL 520
GL IH +A V H ++K +N+ ++ ++ V I DFGL+ +++P +
Sbjct: 132 GLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 521 GGYKAPEQAEVKRLSQKA-DVYSFGVLLLEVLTGRA 555
Y++P KA D+++ G + E+LTG+
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 22/210 (10%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN-PVQAIARLGGYKAPEQAEVKRL 534
+ +K N+L+D+ G ++DFG + + + Y AP K
Sbjct: 166 D----------LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
++ D ++ GVL+ E+ G P P +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI-------QMELDHERMSYLLYQMLVGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S GV++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 86
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 87 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 143
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 144 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 199
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 200 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 259
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 260 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 292
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG Y+ +D + A K + + P +++ + + L +P+VV
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ E+ VY L SLL ++ R + + +G+ +H
Sbjct: 109 GFF---EDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVKRL 534
+V H ++K N+ L+ + I DFGL+ + + + Y APE K
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQ 558
S + D++S G +L +L G+ P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 361 AEMLGKGSLGTVYKAVLDDGGIV------AVKRLKDANPCARKEFEQYMDVIGKLKHPNV 414
++LG+GS G V K VLD + K+ P ++ + ++ +L+H NV
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 415 VKLRAYYYAKEEK--LLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
++L Y +E++ +V +Y G L + R P+ L GL
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAHGYFCQL--IDGLEY 124
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA--IARLG----GYKAP 526
+H + + H ++K N+LL G IS G++ L+P A R ++ P
Sbjct: 125 LHSQ----GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 527 EQAE-VKRLSQ-KADVYSFGVLLLEVLTGRAPSQ 558
E A + S K D++S GV L + TG P +
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 78
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 79 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 135
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 136 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 191
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 192 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 251
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 252 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 284
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDAN-PCARKE 398
K + Y F+L+ LL G+G+ G V A G IVA+K+++ + P
Sbjct: 3 KRIVYNISSDFQLKSLL-------GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR 55
Query: 399 FEQYMDVIGKLKHPNVVKL----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPL 454
+ + ++ KH N++ + R + ++ + L LH ++ L
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM------L 109
Query: 455 DWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPV 514
+ R + +H + V H ++K SN+L++ N + DFGL+ +++
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 515 QA--------------IARLGGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
A Y+APE + S+ DV+S G +L E+ R
Sbjct: 166 AADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 77
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 78 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 134
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 135 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 190
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 191 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 250
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 251 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 283
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 341 KLVFYERKKQFELEDLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDAN-PCARKE 398
K + Y F+L+ LL G+G+ G V A G IVA+K+++ + P
Sbjct: 3 KRIVYNISSDFQLKSLL-------GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR 55
Query: 399 FEQYMDVIGKLKHPNVVKL----RAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPL 454
+ + ++ KH N++ + R + ++ + L LH ++ L
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM------L 109
Query: 455 DWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPV 514
+ R + +H + V H ++K SN+L++ N + DFGL+ +++
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 515 QA--------------IARLGGYKAPE-QAEVKRLSQKADVYSFGVLLLEVLTGR 554
A Y+APE + S+ DV+S G +L E+ R
Sbjct: 166 AADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 27/227 (11%)
Query: 364 LGKGSLGTVYKAVLDDGGIV-AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V AV I A K++ F+Q ++++ L HPN+++L +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 423 AKEEKLLVYDYLPNGSL-----HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ LV + G L H + RI D VL A +A H+
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD-------VLSA---VAYCHK-- 124
Query: 478 GTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEV 531
V H ++K N L + + DFGL+ P + + G Y +P+ E
Sbjct: 125 --LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE- 181
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ D +S GV++ +L G P P+ + E P+
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE 228
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 71
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 72 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 128
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 129 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 184
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 185 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 244
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 245 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 277
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 76
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 77 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 133
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 134 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 189
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 190 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 249
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 250 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 282
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG Y+ +D + A K + + P +++ + + L +P+VV
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ E+ VY L SLL ++ R + + +G+ +H
Sbjct: 109 GFF---EDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVKRL 534
+V H ++K N+ L+ + I DFGL+ + + + Y APE K
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQ 558
S + D++S G +L +L G+ P +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDA---NPCARKEFEQYMDVIGKLKHPNVVKLR 418
LGKG Y+ +D + A K + + P +++ + + L +P+VV
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 419 AYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEYG 478
++ E+ VY L SLL ++ R + + +G+ +H
Sbjct: 93 GFF---EDDDFVYVVLEICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNN-- 145
Query: 479 TAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLN----PVQAIARLGGYKAPEQAEVKRL 534
+V H ++K N+ L+ + I DFGL+ + + + Y APE K
Sbjct: 146 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 535 SQKADVYSFGVLLLEVLTGRAPSQ 558
S + D++S G +L +L G+ P +
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 70
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 127
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 128 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 184 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 243
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 244 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 19/165 (11%)
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
L+HPN+V+ + +V +Y G L + GR D L +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLIS-- 126
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVA--CISDFGLS----LLLNPVQAIARLGG 522
G++ H +V H ++K N LLD + I+DFG S L P A+
Sbjct: 127 GVSYAH----AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVG-TPA 181
Query: 523 YKAPEQAEVKRLSQK-ADVYSFGVLLLEVLTGRAPSQYPSPTRPR 566
Y APE K K ADV+S GV L +L G P + P P+
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPK 224
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 27/227 (11%)
Query: 364 LGKGSLGTVYKAVLDDGGIV-AVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYYY 422
+G+GS G V AV I A K++ F+Q ++++ L HPN+++L +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 423 AKEEKLLVYDYLPNGSL-----HSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHQEY 477
+ LV + G L H + RI D VL A +A H+
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD-------VLSA---VAYCHK-- 141
Query: 478 GTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQAEV 531
V H ++K N L + + DFGL+ P + + G Y +P+ E
Sbjct: 142 --LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE- 198
Query: 532 KRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPK 578
+ D +S GV++ +L G P P+ + E P+
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE 245
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 36/217 (16%)
Query: 364 LGKGSLGTVYKAVL-DDGGIVAVKRLKDANPCARKEFEQYMD---VIGKLKHPNVVKLRA 419
LG GS G V + G A+K L K+ E ++ ++ + P +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 420 YYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRI----PLDWTTRISLVLGAARGLARIHQ 475
+ +V +Y+ G + S L R GR + +I L L I++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 476 EYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS--------LLLNPVQAIARLGGYKAPE 527
++K N+L+D+ G ++DFG + L +A+ APE
Sbjct: 166 ----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL-------APE 208
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTR 564
K ++ D ++ GVL+ E+ G P P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLK-------DANPCARKEFEQYMDVIGKLKHPN 413
E +G G G+V+K V DG I A+KR K D R+ + V+G +H +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH--AVLG--QHSH 70
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP--LDWTTRISLVLGAARGLA 471
VV+ + + + L+ +Y GSL + N RI L+L RGL
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY---RIMSYFKEAELKDLLLQVGRGLR 127
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGV 499
IH + + H ++K SN+ + + +
Sbjct: 128 YIH----SMSLVHMDIKPSNIFISRTSI 151
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 72
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 129
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 130 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 185
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 245
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 246 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 278
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 116
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 173
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 174 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 229
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 290 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 322
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 122
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 123 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 179
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 180 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 235
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 236 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 295
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 296 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 328
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLK-------DANPCARKEFEQYMDVIGKLKHPN 413
E +G G G+V+K V DG I A+KR K D R+ + V+G +H +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH--AVLG--QHSH 70
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP--LDWTTRISLVLGAARGLA 471
VV+ + + + L+ +Y GSL + N RI L+L RGL
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY---RIMSYFKEAELKDLLLQVGRGLR 127
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGV 499
IH + + H ++K SN+ + + +
Sbjct: 128 YIH----SMSLVHMDIKPSNIFISRTSI 151
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLK-------DANPCARKEFEQYMDVIGKLKHPN 413
E +G G G+V+K V DG I A+KR K D R+ + V+G +H +
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH--AVLG--QHSH 72
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP--LDWTTRISLVLGAARGLA 471
VV+ + + + L+ +Y GSL + N RI L+L RGL
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY---RIMSYFKEAELKDLLLQVGRGLR 129
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGV 499
IH + + H ++K SN+ + + +
Sbjct: 130 YIH----SMSLVHMDIKPSNIFISRTSI 153
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 70
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 127
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 128 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYY 183
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 184 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 243
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 244 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 276
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 118/301 (39%), Gaps = 74/301 (24%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
+LG+G+ G V KA D A+K+++ + M ++ L H VV+ Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVM-LLASLNHQYVVR----Y 67
Query: 422 YA----------------KEEKLLV-YDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
YA K+ L + +Y N +L+ L+H + W L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYK 524
L+ IH + + H ++K N+ +D++ I DFGL+ ++ I +L
Sbjct: 124 QILEALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 525 APEQAE-------------------VKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRP 565
P ++ ++K D+YS G++ E++ YP T
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-------YPFSTGM 232
Query: 566 RVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKR 625
+ V++ K +RSV E FD ++ +E++++ +L + P KR
Sbjct: 233 ------ERVNILKKLRSVSIE--FPPDFDDNKMK---VEKKIIRLL------IDHDPNKR 275
Query: 626 P 626
P
Sbjct: 276 P 276
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 362 EMLGKGSLGTVYKAVLD-DGGIVAVKRLK-------DANPCARKEFEQYMDVIGKLKHPN 413
E +G G G+V+K V DG I A+KR K D R+ + V+G +H +
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH--AVLG--QHSH 68
Query: 414 VVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIP--LDWTTRISLVLGAARGLA 471
VV+ + + + L+ +Y GSL + N RI L+L RGL
Sbjct: 69 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY---RIMSYFKEAELKDLLLQVGRGLR 125
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGV 499
IH + + H ++K SN+ + + +
Sbjct: 126 YIH----SMSLVHMDIKPSNIFISRTSI 149
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 48/278 (17%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLDDGG-IVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-PKARREVELHWRAS---QCPH 72
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA-- 129
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 130 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 185
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP---------------------SQYPSP 562
APE ++ + D++S GV++ +L G P ++P+P
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 245
Query: 563 TRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRY 600
V EE + + +R+++K E T + E + +
Sbjct: 246 EWSEVSEEVKML-----IRNLLKTEPTQRMTITEFMNH 278
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 90/236 (38%), Gaps = 49/236 (20%)
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
L+HPN+V+ + +V +Y G L + GR D L +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFFFQQLIS-- 126
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVA--CISDFGL---SLLLNPVQAIARLGGY 523
G++ H +V H ++K N LLD + I DFG S+L + ++ Y
Sbjct: 127 GVSYCH----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 182
Query: 524 KAPEQAEVKRLSQK-ADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRS 582
APE K K ADV+S GV L +L G P + D EE PK R
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE---------DPEE-----PKNFRK 228
Query: 583 VVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLAC-------VVSQPEKRPTMAEV 631
+ R N++ + +H+ C V+ P KR ++ E+
Sbjct: 229 TIH-------------RILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
L+HPN+V+ + +V +Y G L + GR D L +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFFFQQLIS-- 125
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGV--ACISDFGL---SLLLNPVQAIARLGGY 523
G++ H +V H ++K N LLD + I DFG S+L + ++ Y
Sbjct: 126 GVSYCH----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 181
Query: 524 KAPEQAEVKRLSQK-ADVYSFGVLLLEVLTGRAPSQYPSPTRPR 566
APE K K ADV+S GV L +L G P + P P+
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPK 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 476 EYGTAK-VPHGNVKSSNVL-LDKNG---VACISDFGLS--------LLLNPVQAIARLGG 522
EY A+ V H ++K SN+L +D++G I DFG + LL+ P
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYT----AN 185
Query: 523 YKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ APE E + D++S GVLL +LTG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 419 AYYYAK------EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ + ++ LV + L + +L ++ ++ LD L+ G+
Sbjct: 90 NVFTPQKTLEEFQDVYLVME-LMDANLXQVI-------QMELDHERMSYLLYQMLXGIKH 141
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAP 526
+H +A + H ++K SN+++ + I DFGL S ++ P + R Y+AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAP 194
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
E + D++S G ++ E++ + P R +D+ + ++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANPCARKEFEQYMDVIGKLKHPNV 414
E++GKG V + + + G IV V + + + ++ ++ + LKHP++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+L Y + +V++++ L + G + ++ R +
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG-----FVYSEAVASHYMRQILEAL 145
Query: 475 QEYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIA--RLG--GYKAPE 527
+ + H +VK VLL + + + FG+++ L +A R+G + APE
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ + + DV+ GV+L +L+G P
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 361 AEMLGKGSLGTVYKAVLDDGG------IVAVKRLKDANPCARKEFEQYMDVIGKLKHPNV 414
E++GKG V + + + G IV V + + + ++ ++ + LKHP++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 415 VKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
V+L Y + +V++++ L + G + ++ R +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG-----FVYSEAVASHYMRQILEAL 143
Query: 475 QEYGTAKVPHGNVKSSNVLL---DKNGVACISDFGLSLLLNPVQAIA--RLG--GYKAPE 527
+ + H +VK VLL + + + FG+++ L +A R+G + APE
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ + + DV+ GV+L +L+G P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI-------QMELDHERMSYLLYQMLVGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA-AR 468
+HPN++ L+ Y + LV + + G L + R S VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGK 132
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVL-LDKNGV-AC--ISDFGLS--------LLLNPVQA 516
+ +H + V H ++K SN+L +D++G C I DFG + LL+ P
Sbjct: 133 TVEYLHSQ----GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYT 188
Query: 517 IARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ APE + + + D++S G+LL +L G P
Sbjct: 189 ----ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 364 LGKGSLGTVYKA-VLDDGGIVAVKR----LKDANPCARKEFE-QYMDVIGKLKHPNVVKL 417
LG GS G V+K +DG + AVKR + ARK E + +G+ HP V+L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ--HPCCVRL 122
Query: 418 RAYYYAKEEKLLVY--DYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR----GLA 471
A EE ++Y L SL H +P + V G R LA
Sbjct: 123 EQ---AWEEGGILYLQTELCGPSLQQ--HCEAWGASLP------EAQVWGYLRDTLLALA 171
Query: 472 RIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGG---YKAPEQ 528
+H + + H +VK +N+ L G + DFGL + L A G Y APE
Sbjct: 172 HLHSQ----GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL 227
Query: 529 AEVKRLSQKADVYSFGVLLLEV 550
+ ADV+S G+ +LEV
Sbjct: 228 LQ-GSYGTAADVFSLGLTILEV 248
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 419 AYYYAK------EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ + ++ LV + L + +L ++ ++ LD L+ G+
Sbjct: 90 NVFTPQKTLEEFQDVYLVME-LMDANLXQVI-------QMELDHERMSYLLYQMLCGIKH 141
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAP 526
+H +A + H ++K SN+++ + I DFGL S ++ P + R Y+AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAP 194
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
E + D++S G ++ E++ + P R +D+ + ++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 239
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 419 AYYYAK------EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ + ++ LV + L + +L ++ ++ LD L+ G+
Sbjct: 83 NVFTPQKTLEEFQDVYLVME-LMDANLXQVI-------QMELDHERMSYLLYQMLXGIKH 134
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAP 526
+H +A + H ++K SN+++ + I DFGL S ++ P + R Y+AP
Sbjct: 135 LH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAP 187
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
E + D++S G ++ E++ + P R +D+ + ++
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 410 KHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGA-AR 468
+HPN++ L+ Y + LV + + G L + R S VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGK 132
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVL-LDKNGV-AC--ISDFGLS--------LLLNPVQA 516
+ +H + V H ++K SN+L +D++G C I DFG + LL+ P
Sbjct: 133 TVEYLHSQ----GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYT 188
Query: 517 IARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
+ APE + + + D++S G+LL +L G P
Sbjct: 189 ----ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP-EVVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 419 AYYYAK------EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAR 472
+ + ++ LV + L + +L ++ ++ LD L+ G+
Sbjct: 90 NVFTPQKTLEEFQDVYLVME-LMDANLXQVI-------QMELDHERMSYLLYQMLXGIKH 141
Query: 473 IHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAP 526
+H +A + H ++K SN+++ + I DFGL S ++ P + R Y+AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAP 194
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
E + D++S G ++ E++ + P R +D+ + ++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 239
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+G G+ G V A GI VAVK+L N K + + ++ + H N++ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 421 YYAK------EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + ++ LV + L + +L ++H + LD L+ G+ +H
Sbjct: 90 FTPQKTLEEFQDVYLVME-LMDANLCQVIH-------MELDHERMSYLLYQMLCGIKHLH 141
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS------LLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL+ ++ P + R Y+APE
Sbjct: 142 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY-VVTRY--YRAPEV 194
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQ 558
+ D++S G ++ E++ G Q
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSVIFQ 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 90 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 144 ----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 196
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 239
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 355 DLLRASAEMLGKGSLGTVYKAVLD-DGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPN 413
D + ++++LG G G V + A+K L+D P AR+E E + + P+
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDC-PKARREVELHWRAS---QCPH 116
Query: 414 VVKLRAYY---YAKEEKLL-VYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARG 469
+V++ Y YA + LL V + L G L S + +RG + I +G A
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQ-DRGDQAFTEREASEIXKSIGEA-- 173
Query: 470 LARIHQEYGTAKVPHGNVKSSNVLLDK---NGVACISDFGL---SLLLNPVQAIARLGGY 523
+ +H + + H +VK N+L N + ++DFG + N + Y
Sbjct: 174 IQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYY 229
Query: 524 KAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
APE ++ + D +S GV+ +L G P
Sbjct: 230 VAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 86/242 (35%), Gaps = 49/242 (20%)
Query: 364 LGKGSLGTVYKAVLDDG-GIVAVK-----RLKDANPCARKEFEQYMDVIGKLKHPNVVKL 417
+G+GS G V A+ + I A+K +++ NP + + + ++ KL HPN+ +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 418 RAYYYAKEEKLLVYDYLPNGSL-------------------------------HSLLHGN 446
Y ++ LV + G L ++G+
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 447 RGPGRIPLDWTTRISLVLGAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACIS--D 504
R LD+ R L+ R + + H ++K N L N I D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 505 FGLSLLLNPVQAIARLGG--------YKAPEQAEVKRLSQ--KADVYSFGVLLLEVLTGR 554
FGLS + G + APE S K D +S GVLL +L G
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 555 AP 556
P
Sbjct: 274 VP 275
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 50/226 (22%)
Query: 363 MLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVKLRAYY 421
+LG+G+ G V KA D A+K+++ + + ++ L H VV+ Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSE-VXLLASLNHQYVVR----Y 67
Query: 422 YA----------------KEEKLLV-YDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVL 464
YA K+ L + +Y N +L+ L+H + W L
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 465 GAARGLARIHQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVQAIARLGGYK 524
L+ IH + + H N+K N+ +D++ I DFGL+ ++ I +L
Sbjct: 124 QILEALSYIHSQ----GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 525 APEQAE-------------------VKRLSQKADVYSFGVLLLEVL 551
P ++ ++K D YS G++ E +
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 128 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 182 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 234
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 277
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 128 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 182 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 234
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 277
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 364 LGKGSLGTVYKAVLDDGGI-VAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLRAY 420
+G G+ G V A GI VAVK+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 421 YYAK------EEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIH 474
+ + ++ LV + L + +L ++H + LD L+ G+ +H
Sbjct: 92 FTPQKTLEEFQDVYLVME-LMDANLCQVIH-------MELDHERMSYLLYQMLCGIKHLH 143
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGLS------LLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL+ ++ P + R Y+APE
Sbjct: 144 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY-VVTRY--YRAPEV 196
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 83 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 137 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 189
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 232
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 91 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 145 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 197
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 89 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 195
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 238
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 90 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 144 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 196
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 239
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 353 LEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLK- 410
ED+ + ++LG+G+ V + L AVK ++ R + ++++ + +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGL 470
H NV++L ++ ++ LV++ + GS+ S +H R + +V A L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASAL 124
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDK-NGVA----CISDFGLSLLLN----PVQAIARL- 520
+H + + H ++K N+L + N V+ C D G + LN P+ L
Sbjct: 125 DFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 521 ----GGYKAPE-----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE E ++ D++S GV+L +L+G P
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 91 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 145 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 197
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 240
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 143
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 144 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 196
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 84 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 138 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 190
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 84 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 138 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 190
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y AVLD VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 419 AYYYAK---EEKLLVYDYLPNGSLHSLLHGNRGPG-RIPLDWTTRISLVLGAARGLARIH 474
+ + EE VY + L+ N ++ LD L+ G+ +H
Sbjct: 90 NVFTPQKTLEEFQDVY------LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 475 QEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPEQ 528
+A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 144 ----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPEV 196
Query: 529 AEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNKVIE 239
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 476 EYGTAK-VPHGNVKSSNVL-LDKNG---VACISDFGLSLLLNPVQAI----ARLGGYKAP 526
EY A+ V H ++K SN+L +D++G I DFG + L + + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAP 189
Query: 527 EQAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
E E + D++S GVLL LTG P
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 144
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 145 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPF-VVTRY--YRAPE 197
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTG 553
+ D++S G ++ E++ G
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 364 LGKGSLGTVYKAV-LDDGGIVAVKRLKDANP------CARKEFEQYMDVIGKLKHPNVVK 416
LG+G+ G VYKA+ VA+KR++ + A +E + ++ +L+H N+++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE----VSLLKELQHRNIIE 97
Query: 417 LRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRI--SLVLGAARGLARIH 474
L++ + L+++Y N + ++ P D + R+ S + G+ H
Sbjct: 98 LKSVIHHNHRLHLIFEYAENDLKKYM---DKNP-----DVSMRVIKSFLYQLINGVNFCH 149
Query: 475 QEYGTAKVPHGNVKSSNVLL-----DKNGVACISDFGLSLLLN-PVQAIAR---LGGYKA 525
+ + H ++K N+LL + V I DFGL+ P++ Y+
Sbjct: 150 ----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 526 PEQAEVKR-LSQKADVYSFGVLLLEVL 551
PE R S D++S + E+L
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 30/225 (13%)
Query: 353 LEDLLRASAEMLGKGSLGTVYKAV-LDDGGIVAVKRLKDANPCARKEFEQYMDVIGKLK- 410
ED+ + ++LG+G+ V + L AVK ++ R + ++++ + +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 411 HPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGL 470
H NV++L ++ ++ LV++ + GS+ S +H R + +V A L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASAL 124
Query: 471 ARIHQEYGTAKVPHGNVKSSNVLLDK-NGVA--CISDFGL--SLLLN----PVQAIARL- 520
+H + + H ++K N+L + N V+ I DFGL + LN P+ L
Sbjct: 125 DFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 521 ----GGYKAPE-----QAEVKRLSQKADVYSFGVLLLEVLTGRAP 556
Y APE E ++ D++S GV+L +L+G P
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP-EVVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQWNKVIE 239
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 17/164 (10%)
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
L+HPN+V+ + +V +Y G L + GR D L +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFFFQQLIS-- 126
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVA--CISDFGL---SLLLNPVQAIARLGGY 523
G++ H +V H ++K N LLD + I FG S+L + ++ Y
Sbjct: 127 GVSYCH----AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAY 182
Query: 524 KAPEQAEVKRLSQK-ADVYSFGVLLLEVLTGRAPSQYPSPTRPR 566
APE K K ADV+S GV L +L G P + P P+
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPK 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 142
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + + R Y+APE
Sbjct: 143 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP-EVVTRY--YRAPE 195
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNKVIE 239
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 17/164 (10%)
Query: 409 LKHPNVVKLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAAR 468
L+HPN+V+ + +V +Y G L + GR D L +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFFFQQLIS-- 126
Query: 469 GLARIHQEYGTAKVPHGNVKSSNVLLDKNGVA--CISDFGL---SLLLNPVQAIARLGGY 523
G++ H +V H ++K N LLD + I FG S+L + + Y
Sbjct: 127 GVSYCH----AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAY 182
Query: 524 KAPEQAEVKRLSQK-ADVYSFGVLLLEVLTGRAPSQYPSPTRPR 566
APE K K ADV+S GV L +L G P + P P+
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPK 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 147
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 148 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 200
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNKVIE 244
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 364 LGKGSLGTV---YKAVLDDGGIVAVKRLKD--ANPCARKEFEQYMDVIGKLKHPNVVKLR 418
+G G+ G V Y A+L+ VA+K+L N K + + ++ + H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 419 AYYYAKE-----EKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARI 473
+ ++ + + + L + +L ++ ++ LD L+ G+ +
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHL 136
Query: 474 HQEYGTAKVPHGNVKSSNVLLDKNGVACISDFGL------SLLLNPVQAIARLGGYKAPE 527
H +A + H ++K SN+++ + I DFGL S ++ P + R Y+APE
Sbjct: 137 H----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRY--YRAPE 189
Query: 528 QAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVD 575
+ D++S G ++ E++ + P R +D+ + ++
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNKVIE 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,590,721
Number of Sequences: 62578
Number of extensions: 686838
Number of successful extensions: 4005
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 624
Number of HSP's that attempted gapping in prelim test: 2180
Number of HSP's gapped (non-prelim): 1104
length of query: 670
length of database: 14,973,337
effective HSP length: 105
effective length of query: 565
effective length of database: 8,402,647
effective search space: 4747495555
effective search space used: 4747495555
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)