BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036651
(60 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E6B|A Chain A, Crystal Structure Of A Zeta Class Glutathione
S-Transferase From Arabidopsis Thaliana
Length = 221
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 7 FAILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
FAI+MYL+EK P+ PLLP DL ++A+NYQA +V S IQP Q+L V+
Sbjct: 74 FAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPHQNLAVI 120
>pdb|1FW1|A Chain A, Glutathione Transferase ZetaMALEYLACETOACETATE ISOMERASE
Length = 216
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 7 FAILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
AI+ YLEE P LLP D K++A + L++ IQPLQ+L VL
Sbjct: 73 LAIIEYLEETRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVL 119
>pdb|2CZ2|A Chain A, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-1
Crystal)
pdb|2CZ3|A Chain A, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-2
Crystal)
pdb|2CZ3|B Chain B, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-2
Crystal)
Length = 223
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 7 FAILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
AI YLEE P LLP D +++AI + L++S IQPLQ+L VL
Sbjct: 80 LAIXEYLEETRPIPRLLPQDPQKRAIVRXISDLIASGIQPLQNLSVL 126
>pdb|3NIV|A Chain A, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|B Chain B, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|C Chain C, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|D Chain D, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
Length = 222
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 8 AILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
AI+ YLEE +P+ PLLP D KA A +V+ PL +L VL
Sbjct: 71 AIIDYLEEIHPEXPLLPKDPFXKATLKSXALIVACDXHPLNNLRVL 116
>pdb|3QAV|A Chain A, Crystal Structure Of A Glutathione S-transferase From
Antarctic Clam Laternula Elliptica
pdb|3QAW|A Chain A, Crystal Structure Of A Glutathione-s-transferase From
Antarctic Clam Laternula Elliptica In A Complex With
Glutathione
Length = 243
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 8 AILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSS 42
AI MYLEEK P+ PL PSD +A YQ + S+
Sbjct: 93 AICMYLEEKYPKVPLFPSDTTIRAKVYQRMFETSN 127
>pdb|4IGJ|A Chain A, Crystal Structure Of Maleylacetoacetate Isomerase From
Anaeromyxobacter Dehalogenans 2cp-1, Target Efi-507175
pdb|4IGJ|B Chain B, Crystal Structure Of Maleylacetoacetate Isomerase From
Anaeromyxobacter Dehalogenans 2cp-1, Target Efi-507175
Length = 242
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 8 AILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
AIL +LEE++P+ LLP DL +A A V+S QP+Q+ VL
Sbjct: 95 AILEWLEERHPEPALLPPDLWGRARVRALAEHVNSGTQPMQNALVL 140
>pdb|4J2F|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Ricinus Communis, Target Efi-501866
Length = 223
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 9 ILMYLEEKNPQHPLLPSDLKRKAI 32
IL YL+E P++PLLPSD +A+
Sbjct: 70 ILEYLDETWPENPLLPSDPHERAV 93
>pdb|2JL4|A Chain A, Holo Structure Of Maleyl Pyruvate Isomerase, A Bacterial
Glutathione-S-Transferase In Zeta Class
pdb|2JL4|B Chain B, Holo Structure Of Maleyl Pyruvate Isomerase, A Bacterial
Glutathione-S-Transferase In Zeta Class
Length = 213
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 8 AILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
AI+ +LEE+ P LLP+D + A +V I P+ + +L
Sbjct: 68 AIIEWLEEQYPTPALLPADADGRQRVRALAAIVGCDIHPINNRRIL 113
>pdb|2V6K|A Chain A, Structure Of Maleyl Pyruvate Isomerase, A Bacterial
Glutathione-s-transferase In Zeta Class, In Complex With
Substrate Analogue Dicarboxyethyl Glutathione
pdb|2V6K|B Chain B, Structure Of Maleyl Pyruvate Isomerase, A Bacterial
Glutathione-s-transferase In Zeta Class, In Complex With
Substrate Analogue Dicarboxyethyl Glutathione
Length = 214
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 8 AILMYLEEKNPQHPLLPSDLKRKAINYQAAYLVSSSIQPLQSLPVL 53
AI+ +LEE+ P LLP+D + A +V I P+ + +L
Sbjct: 69 AIIEWLEEQYPTPALLPADADGRQRVRALAAIVGCDIHPINNRRIL 114
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,539,810
Number of Sequences: 62578
Number of extensions: 41809
Number of successful extensions: 135
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125
Number of HSP's gapped (non-prelim): 10
length of query: 60
length of database: 14,973,337
effective HSP length: 31
effective length of query: 29
effective length of database: 13,033,419
effective search space: 377969151
effective search space used: 377969151
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)