BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036659
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 121/217 (55%), Gaps = 41/217 (18%)
Query: 1 KRSGVSSRRFGAPKTAPLPPTIRIQVVLEKVIDTRWVRHAIARLFDFSAGSKFVGKEIVT 60
K SGV+ P P + VIDT LFD S ++F+GKEIV
Sbjct: 73 KSSGVTMECHAVKAVTPEGPILN-------VIDTPG-------LFDLSVSAEFIGKEIVK 118
Query: 61 CIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDE 120
C+ +A G+HAVL+V SVR+R SQEEE L + Q LFG + DY+IVVFTGGD LED+
Sbjct: 119 CLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLFGSKIVDYLIVVFTGGDVLEDDGM 178
Query: 121 TLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLFDNKTK 180
TLEDYLG P DFL + +L LC R +LFDNKTK
Sbjct: 179 TLEDYLGDNMP--------------------DFL-------KRVLILCGQRMILFDNKTK 211
Query: 181 DEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVELK 217
D+ K+T+Q+ +LL L++ V QN+ PYTD+++ +K
Sbjct: 212 DDEKKTKQVHELLKLIDLVRKQNNNIPYTDEMYHMIK 248
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 131/247 (53%), Gaps = 34/247 (13%)
Query: 54 VGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGD 113
+ EI+ C+ MA++GIHAVL+V S R R S+EEE+ +++ Q +FG + DY IVVFTGGD
Sbjct: 75 ISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDYCIVVFTGGD 134
Query: 114 ELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCV 173
+LE++D+TL+DY CP+ L +L+LC R V
Sbjct: 135 DLEEDDQTLDDYFRAGCPEFLTK---------------------------VLRLCGGRKV 167
Query: 174 LFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVELKLLFLPFVNDLEKKVVP 233
LFDNK+KDE K+ EQ+ +LL+ V +V Q G PYT + ++K ND +
Sbjct: 168 LFDNKSKDEKKKVEQVKQLLARVENVGEQTGGIPYTYQLHRKIK-----EENDERLREEE 222
Query: 234 NMLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSNDEIRKLRENLERAQRETEELRKRAE 293
+++ +R E +L E Q L +E Q+ + K+ I + N E E + RAE
Sbjct: 223 RVIESKNRAEAELAEMQQNLLMEKEKLQMEEAKNKQLIAQAEAN--EKLMEQERAKNRAE 280
Query: 294 KGGCAIL 300
A++
Sbjct: 281 TELAAVM 287
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 32/171 (18%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
LFD KEI CI + G HA+++V + R+++EE+ + + +FGK+
Sbjct: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMK 125
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+M+++FT +ELE +DF+ +G +
Sbjct: 126 HMVILFTRKEELEGQS------------------------------FHDFIADADVGLKS 155
Query: 164 ILQLCDNRCVLFDNKTK-DEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
I++ C NRC F N K +A++ Q+ +L+ L+ + N+G ++DDI+
Sbjct: 156 IVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIY 206
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 32/170 (18%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+FD + KEI+ CI + G HA+L+V + R+++EE A +FG+
Sbjct: 89 IFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGERARS 147
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+MI++FT D+L D + L DYL RE P+ ++ D + +G
Sbjct: 148 FMILIFTRKDDLGDTN--LHDYL-REAPEDIQ----------------DLMDIFG----- 183
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
D C L + T A++ Q +LL L+ V +N YT+ ++
Sbjct: 184 -----DRYCALNNKATG--AEQEAQRAQLLGLIQRVVRENKEGCYTNRMY 226
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Query: 56 KEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDEL 115
+EI C+ + ++G+ ++V + RF+QE+E + + F +N+ YMIV+FT ++L
Sbjct: 549 EEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENIMKYMIVLFTRKEDL 607
Query: 116 EDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLF 175
D D L DY K LK IL+ C+ R F
Sbjct: 608 GDGD--LHDYTNNTKNKALKK---------------------------ILKKCNGRVCAF 638
Query: 176 DNKTKDEAKRTEQIWKLLSLVNSVAVQND 204
+NK E + T Q+ LL + NS+ D
Sbjct: 639 NNKETGEDQET-QVKGLLKIANSLKKNYD 666
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
LF + S+ + + C+ + D H VL++ + +++E+ + G +
Sbjct: 107 LFSSLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYR 165
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+MIVVFT DEL ++++L +Y+ E + LK L IG R
Sbjct: 166 HMIVVFTREDEL--DEDSLWNYI--ESKESLKE------------------LIKNIGSR- 202
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVE 215
RC F+NK D+ +R Q++KLL + + +++ +PY + + +E
Sbjct: 203 -------RCCTFNNKA-DKKQRELQVFKLLDAIELLMMESP-EPYFEPLKME 245
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 32/170 (18%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+FD KEI C+ + G HA+L+V + ++ EE A ++F K
Sbjct: 89 IFDTEVPDADTQKEITRCVALTSPGPHALLLVIPLGC-YTVEEHKATRKLLSMFEKKARR 147
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+MI++ T D+LED D + +Y L+ +L + +F
Sbjct: 148 FMILLLTRKDDLEDTD--IHEY-------------LETAPEVLQELIYEF---------- 182
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
NR LF+NK A++ EQ +LL+LV S+ +N G+ +T+ ++
Sbjct: 183 -----RNRYCLFNNKASG-AEQEEQKRQLLTLVQSMVRENGGKYFTNKMY 226
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 36/222 (16%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+F+ ++ + K+I C M G H +L+V + R++ E+ A+ + +FG V
Sbjct: 103 IFESKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGVMR 161
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
YMIV+FT ++L DE+LE+++ ++ LH L
Sbjct: 162 YMIVLFTHKEDLA--DESLEEFVTH-------------TGNLDLHRL------------- 193
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVELKLLFLPF 223
+Q C R F+NK E ++ Q+ +L++LV + +++G +++D+FV ++
Sbjct: 194 -VQECGRRYCAFNNKASGEEQQG-QLAELMALVRRLEQEHEGSFHSNDLFVYTQVFLRGG 251
Query: 224 VNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEEAAQLAQM 265
++ ++ + K +Q E+Q L+ +E + +A+M
Sbjct: 252 YSEHQEPYKFYLTK-----VRQEVEKQKRELEEQEGSWMAKM 288
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 31/177 (17%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+F+ A ++ + K+I C + G H +L+V + RF+ E+ A+ + +FG V
Sbjct: 85 IFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMR 143
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+MIV+FT ++LE +++LE++ + H N L R
Sbjct: 144 HMIVLFTRKEDLE--EKSLEEF--------------------VTHTDNRSL-------RS 174
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVELKLLF 220
+ Q C R F+N+ E ++ Q+ +L++LV + + +G +++D+F+ + L
Sbjct: 175 LTQECGRRYCAFNNRASGEEQQG-QLAELMALVRRLEQECEGSFHSNDLFLHAEALL 230
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 31/152 (20%)
Query: 61 CIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDE 120
C +A G HAVL+V V R++ E++ A Q +FG + Y I+VFT +EL +
Sbjct: 176 CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTILVFTRKEELAEG-- 232
Query: 121 TLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLFDNKTK 180
+LE+Y+ K L + L V C+ R F+N+ +
Sbjct: 233 SLEEYIKENNNKTLDA--LDV-------------------------ACERRHCGFNNRAQ 265
Query: 181 DEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDI 212
+ + Q+ KL+ + S+ +N+G YT ++
Sbjct: 266 GDEQEA-QLQKLMEEIESILWENEGHCYTMEL 296
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 31/153 (20%)
Query: 61 CIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDE 120
C ++ G HA+L+V + RF+ +++ A+ + +FG++V +M++VFT ++L
Sbjct: 104 CYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGG-- 160
Query: 121 TLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLFDNKTK 180
+L DY+ + L R ++ C R FDN+
Sbjct: 161 SLHDYVSNTENRAL---------------------------RELVAECGGRVCAFDNRAT 193
Query: 181 DEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
+ Q+ +LL +V + +++ G Y+++++
Sbjct: 194 GREQEA-QVEQLLGMVEGLVLEHKGAHYSNEVY 225
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 86/177 (48%), Gaps = 31/177 (17%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+F+ A ++ + K+I C + G H +L+V + RF+ E+ A+ + +FG V
Sbjct: 81 IFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVFGVGVMR 139
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+MIV+FT ++L +++LE+++ + L+S
Sbjct: 140 HMIVLFTRKEDL--AEKSLEEFVTHTDNRSLRS--------------------------- 170
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVELKLLF 220
++Q C R F+N+ E ++ Q+ +L++LV + + +G +++D+F+ + L
Sbjct: 171 LVQECGRRYCAFNNRASGEEQQG-QLAELMALVRRLEQECEGSFHSNDLFLHAETLL 226
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 32/145 (22%)
Query: 56 KEIVTCI-GMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDE 114
KEI C+ ++G+ ++VF + RF+QE+EA + + F +N+ YMIV+FT ++
Sbjct: 548 KEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEENIMKYMIVLFTRKED 606
Query: 115 LEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVL 174
L D D L D+ K LK I + C R
Sbjct: 607 LGDGD--LYDFTNNTKNKVLKR---------------------------IFKKCKGRVCA 637
Query: 175 FDNKTKDEAKRTEQIWKLLSLVNSV 199
F+NK E + T Q+ LL++ N +
Sbjct: 638 FNNKETGEDQET-QVKALLTIANDL 661
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 72 VLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDETLEDYLGRECP 131
VL++ + ++E++ + Q +FG + +MIVVFT DEL ++TL++++ E
Sbjct: 133 VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMIVVFTREDEL--GEDTLQNHI--ESK 188
Query: 132 KPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLFDNKTKDEAKRTEQIWK 191
K LK + I + RC F+NK D+ ++ Q+ +
Sbjct: 189 KYLK--------------------------KLIENIGSQRCCAFNNKA-DKKQQELQVSQ 221
Query: 192 LLSLVNSVAVQNDGQPY 208
L + + +++ G +
Sbjct: 222 FLDAIEFLMMESPGTYF 238
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 33/150 (22%)
Query: 61 CIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDE 120
C +A G HAVL+V V R++ E++A Q +FG + Y I+VFT ++L +
Sbjct: 177 CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTILVFTRKEDLAEG-- 233
Query: 121 TLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQL-CDNRCVLFDNKT 179
+LE+Y+ K L +L + C+ R F+NK
Sbjct: 234 SLEEYIQENNNKSLD----------------------------VLDVACERRHCGFNNKA 265
Query: 180 KDEAKRTEQIWKLLSLVNSVAVQNDGQPYT 209
+ + + Q+ KL+ V + +N+G YT
Sbjct: 266 QGDEQEA-QLKKLMEEVELILWENEGHCYT 294
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+FD +EI + + G HA+L+V + R++ EE A +FGK
Sbjct: 89 IFDTEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARR 147
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+MI++ T D+LED D + +YL + PK F +
Sbjct: 148 FMILLLTRKDDLEDTD--IHEYL-EKAPK----------------FFQE----------- 177
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSV 199
++ NR LF+N+ A++ EQ +LL+LV S+
Sbjct: 178 VMHEFQNRYCLFNNRASG-AEKEEQKMQLLTLVQSM 212
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+F+ A ++ + K I C ++ G H +L+V + RF+ ++ A+ + +FG
Sbjct: 86 IFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIRKVKEVFGTGAMR 144
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+++++FT ++L + L+DY+ LK
Sbjct: 145 HVVILFTHKEDL--GGQALDDYVANTDNCSLKD--------------------------- 175
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIFVELKLL 219
+++ C+ R F+N E +R +Q +LL+++ + + +G +++D+F++ +LL
Sbjct: 176 LVRECERRYCAFNNWGSVEEQRQQQA-ELLAVIERLGREREGSFHSNDLFLDAQLL 230
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 31/157 (19%)
Query: 57 EIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELE 116
E C ++ G HA+L+V + RF+ ++ AL + + LFGK V +VVFT ++L
Sbjct: 76 ETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMARTVVVFTRQEDLA 134
Query: 117 DNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLFD 176
++L+DY +H ++ L R ++ C R +
Sbjct: 135 --GDSLQDY---------------------VHCTDNRAL------RDLVAECGGRVCALN 165
Query: 177 NKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
N+ ++R Q +LL +V + ++ G Y+++++
Sbjct: 166 NRATG-SEREAQAEQLLGMVACLVREHGGAHYSNEVY 201
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 56 KEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDEL 115
+E+ C+ + G ++VF + RF++E++ A+ + +FG + Y I++FT ++L
Sbjct: 512 EEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFTKYAIMLFTRKEDL 570
Query: 116 EDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLF 175
+ LED++ K L R I + C R F
Sbjct: 571 GAGN--LEDFMKNSDNKAL---------------------------RRIFKKCGRRVCAF 601
Query: 176 DNKTKDEAKRTEQIWKLLSLVNSVAVQN--DGQPYTDD 211
+NK +A+ T Q+ LL+ VN + ++ G P+T +
Sbjct: 602 NNKETGQAQET-QVKALLTKVNDLRKESGWSGYPHTQE 638
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 32/136 (23%)
Query: 68 GIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDETLEDYLG 127
G HA L+V + +++ +EA L + Q FG+ F+YMI++ T ++L D D
Sbjct: 323 GPHAFLLVTPL-GFYTKNDEAVLSTIQNNFGEKFFEYMIILLTRKEDLGDQD-------- 373
Query: 128 RECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDNRCVLFDNKTKDEAKRTE 187
L+ FL G++Q C NR F+ + E ++
Sbjct: 374 ----------------------LDTFLRNSNKALYGLIQKCKNRYSAFNYRATGEEEQ-R 410
Query: 188 QIWKLLSLVNSVAVQN 203
Q +LL + S+ QN
Sbjct: 411 QADELLEKIESMVHQN 426
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 33/165 (20%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
LF A ++ + I C+ ++ +HA+L+V ++ F++E+E Q +FG
Sbjct: 69 LFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARR 127
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
++I+VFT + + D+ L+D++ E KPLK
Sbjct: 128 HIIIVFT--RKDDLGDDLLQDFI--EKNKPLKQ--------------------------- 156
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPY 208
++Q + R +F+NKT + ++ Q+ +LL V S+ V +G PY
Sbjct: 157 LVQDYEGRYCIFNNKTNSKDEQITQVLELLRKVESL-VNTNGGPY 200
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 51 SKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFT 110
S V I I ++ G HAVL+V + RF+ E++ + Q +FG V + I+VFT
Sbjct: 105 SPEVADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTILVFT 163
Query: 111 GGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRGILQLCDN 170
++L +LEDY+ RE N+ L W +
Sbjct: 164 RKEDLAGG--SLEDYV-RET--------------------NNQALAW------LDVTLAR 194
Query: 171 RCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
R F+N+ + E + Q+ +L+ V ++ +N+G Y++ +
Sbjct: 195 RHCGFNNRAQGEEQEA-QLRELMEKVEAIMWENEGDYYSNKAY 236
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 44 LFDFSAGSKFVGKEIVTCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFD 103
+F + + + KE+ C ++ G H +L+V + R++ +++ A + +FG++
Sbjct: 81 MFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAAQRVKEIFGEDAMG 139
Query: 104 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKSSRLKVPYSILLHFLNDFLLPWGIGRRG 163
+ IV+FT ++L N +L DY+ K L
Sbjct: 140 HTIVLFTHKEDL--NGGSLMDYMHDSDNKALSK--------------------------- 170
Query: 164 ILQLCDNRCVLFDNKTKDEAKRTEQIWKLLSLVNSVAVQNDGQPYTDDIF 213
++ C R F+N+ + + + +Q+ +L+ + + ++ +G YT+ ++
Sbjct: 171 LVAACGGRICAFNNRA-EGSNQDDQVKELMDCIEDLLMEKNGDHYTNGLY 219
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 65 AKDGIH-AVLVVFSVRSRFSQEEEAALHSWQTLFGKNVFDYMIVVFTGGDELEDNDETLE 123
++G+H A+LV + F QE A+ Q L G + +YM V+FT +ELE+ + E
Sbjct: 101 GQEGLHLALLVQRADVPFFGQEASNAVQLMQELLGDSCKNYMAVLFTHAEELEEAGLSEE 160
Query: 124 DYLGRECPKPL 134
+YL RE L
Sbjct: 161 EYL-REASDTL 170
>sp|A8SE59|ATPA_CERDE ATP synthase subunit alpha, chloroplastic OS=Ceratophyllum demersum
GN=atpA PE=3 SV=1
Length = 507
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL+VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLRVEE 433
>sp|A6RW62|NST1_BOTFB Stress response protein nst1 OS=Botryotinia fuckeliana (strain
B05.10) GN=nst1 PE=3 SV=1
Length = 1168
Score = 33.9 bits (76), Expect = 1.5, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 235 MLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSNDEIRKLRENLERAQRETEELRKRAEK 294
M +E +R + + E+A+ ++EE AQ +E RK +E ++A E E +RK +EK
Sbjct: 527 MAEEKARKDAEKAAEEASLREIEEKKAEAQRLKREENRKKKEAQKKADEE-ERVRKESEK 585
>sp|B1NWD5|ATPA_MANES ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta
GN=atpA PE=3 SV=1
Length = 507
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
FVEL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FVELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEE 433
>sp|A0A320|ATPA_COFAR ATP synthase subunit alpha, chloroplastic OS=Coffea arabica GN=atpA
PE=3 SV=1
Length = 507
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLAVEE 433
>sp|Q70XV0|ATPA_AMBTC ATP synthase subunit alpha, chloroplastic OS=Amborella trichopoda
GN=atpA PE=3 SV=1
Length = 507
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLAVEE 433
>sp|A1XGM3|ATPA_RANMC ATP synthase subunit alpha, chloroplastic OS=Ranunculus macranthus
GN=atpA PE=3 SV=1
Length = 507
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLTVEE 433
>sp|Q49L13|ATPA_EUCGG ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus
subsp. globulus GN=atpA PE=3 SV=1
Length = 507
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLTVEE 433
>sp|Q9BBS3|ATPA_LOTJA ATP synthase subunit alpha, chloroplastic OS=Lotus japonicus
GN=atpA PE=3 SV=1
Length = 510
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSND--- 269
F EL+ F F +DL+K N L RL + L + Q+APL VEE +N
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEEQVITIYTGTNGYLD 447
Query: 270 --EIRKLRENL 278
EIR++R+ L
Sbjct: 448 SLEIRQVRKFL 458
>sp|Q32RS8|ATPA_STAPU ATP synthase subunit alpha, chloroplastic OS=Staurastrum
punctulatum GN=atpA PE=3 SV=1
Length = 512
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FSQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLAVEE 433
>sp|Q7YJY4|ATPA_CALFG ATP synthase subunit alpha, chloroplastic OS=Calycanthus floridus
var. glaucus GN=atpA PE=3 SV=1
Length = 507
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQAAPLTVEE 433
>sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens
GN=EPS15 PE=1 SV=2
Length = 896
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 237 KETSRLEQQLTE------EQA---APLKVEEAAQLAQMKS-NDEIRKLRENLERAQRETE 286
++ ++LE+QL E E+A + LK E +Q +Q+ + +E+ K RE L R Q+ET
Sbjct: 403 EQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSRLQQETA 462
Query: 287 ELRKRAEKG 295
EL + E G
Sbjct: 463 ELEESVESG 471
>sp|Q09MJ3|ATPA_CITSI ATP synthase subunit alpha, chloroplastic OS=Citrus sinensis
GN=atpA PE=3 SV=1
Length = 507
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQAQAAPLTVEE 433
>sp|Q0ZJ35|ATPA_VITVI ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera GN=atpA
PE=3 SV=1
Length = 507
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FAQFSSDLDK-ATQNQLARGQRLRELLKQSQAAPLTVEE 433
>sp|Q85X67|ATPA_PINKO ATP synthase subunit alpha, chloroplastic OS=Pinus koraiensis
GN=atpA PE=3 SV=1
Length = 494
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSND--- 269
F EL+ F F +DL+K + L RL + L + Q+APLKVEE +N
Sbjct: 390 FAELEA-FAQFASDLDK-ATQDQLARGQRLRELLKQSQSAPLKVEEQIATIYTGTNGYLD 447
Query: 270 --EIRKLRENLER 280
EI ++R L R
Sbjct: 448 ILEIAQVRNFLVR 460
>sp|Q1ACM8|ATPA_CHAVU ATP synthase subunit alpha, chloroplastic OS=Chara vulgaris GN=atpA
PE=3 SV=1
Length = 508
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSNDEIR 272
F EL+ F F +DL+K N L RL + L + Q++PL VEE N +
Sbjct: 393 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQAQSSPLSVEEQVATIYTGINGYLD 450
Query: 273 KLRENLERAQRETEELRK 290
KL ET+++RK
Sbjct: 451 KL---------ETQQVRK 459
>sp|C4L191|MUTS_EXISA DNA mismatch repair protein MutS OS=Exiguobacterium sp. (strain
ATCC BAA-1283 / AT1b) GN=mutS PE=3 SV=1
Length = 842
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 240 SRLEQQLTE----EQAAPLKVEEAAQLAQMKSNDEIRK-------LRENLERAQRETEEL 288
S LE + T+ EQ+AP +VEE +QL+ +SND +R+ L N A + EL
Sbjct: 776 SELESEATKPALNEQSAPPQVEEVSQLSLFESNDAVREQLLKLDLLAMNPIEAMQALYEL 835
Query: 289 RKRAEKG 295
++ A+KG
Sbjct: 836 QQTAKKG 842
>sp|Q19VA5|ATPA_CHLAT ATP synthase subunit alpha, chloroplastic OS=Chlorokybus
atmophyticus GN=atpA PE=3 SV=2
Length = 506
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + QAAPL VEE
Sbjct: 390 FAELEA-FSQFASDLDK-ATQNQLARGRRLRELLKQAQAAPLSVEE 433
>sp|P00823|ATPA_TOBAC ATP synthase subunit alpha, chloroplastic OS=Nicotiana tabacum
GN=atpA PE=2 SV=2
Length = 507
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEE 433
>sp|A2T317|ATPA_ANGEV ATP synthase subunit alpha, chloroplastic OS=Angiopteris evecta
GN=atpA PE=3 SV=1
Length = 508
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 392 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLAVEE 435
>sp|Q27S65|ATPA_SOLTU ATP synthase subunit alpha, chloroplastic OS=Solanum tuberosum
GN=atpA PE=3 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEE 433
>sp|Q2MIB5|ATPA_SOLLC ATP synthase subunit alpha, chloroplastic OS=Solanum lycopersicum
GN=atpA PE=3 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEE 433
>sp|Q2MIK2|ATPA_SOLBU ATP synthase subunit alpha, chloroplastic OS=Solanum bulbocastanum
GN=atpA PE=3 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEE 433
>sp|Q09G61|ATPA_PLAOC ATP synthase subunit alpha, chloroplastic OS=Platanus occidentalis
GN=atpA PE=3 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLTVEE 433
>sp|Q85FN4|ATPA_ADICA ATP synthase subunit alpha, chloroplastic OS=Adiantum
capillus-veneris GN=atpA PE=2 SV=2
Length = 507
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 391 FAELEA-FAQFASDLDK-TTQNQLARGQRLRELLKQSQSAPLAVEE 434
>sp|P06283|ATPA_MARPO ATP synthase subunit alpha, chloroplastic OS=Marchantia polymorpha
GN=atpA PE=3 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLSVEE 433
>sp|Q06GS5|ATPA_PIPCE ATP synthase subunit alpha, chloroplastic OS=Piper cenocladum
GN=atpA PE=3 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL+K N L RL + L + Q+APL VEE
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQSQSAPLAVEE 433
>sp|Q92JP8|SCA1_RICCN Putative surface cell antigen sca1 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=sca1 PE=3 SV=1
Length = 1902
Score = 32.0 bits (71), Expect = 6.4, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 217 KLLFLPF-VNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSNDEIRKLR 275
K F+P + ++V M+ SR+ + + + A +V +A K + ++KL
Sbjct: 268 KPTFVPLPIKKSSTEIVAGMVSNISRVNEMIGIKLA---EVTQAIDTTDKKDKERLQKLY 324
Query: 276 ENLERAQRETEELRKRAEK 294
L Q+ TE+L+ RAE+
Sbjct: 325 TQLTSTQKTTEKLKSRAEE 343
>sp|P42567|EPS15_MOUSE Epidermal growth factor receptor substrate 15 OS=Mus musculus
GN=Eps15 PE=1 SV=1
Length = 897
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 237 KETSRLEQQLTE------EQA---APLKVEEAAQLAQMKS-NDEIRKLRENLERAQRETE 286
++ ++LE+QL E E+A + LK E +Q +Q+ S +E+ K RE L R Q+ET
Sbjct: 403 EQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISSYEEELLKAREELSRLQQETA 462
Query: 287 ELRKRAEKG 295
+L + E G
Sbjct: 463 QLEESVESG 471
>sp|P06450|ATPA_SPIOL ATP synthase subunit alpha, chloroplastic OS=Spinacia oleracea
GN=atpA PE=1 SV=1
Length = 507
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEEAAQLAQMKSNDEIR 272
F EL+ F F +DL+K N L RL + L + Q+APL VEE +N +
Sbjct: 390 FAELEA-FAQFASDLDK-ATQNQLARGQRLRELLKQPQSAPLTVEEQVMTIYTGTNGYLD 447
Query: 273 KLRENLERAQRETEELR 289
L L++ ++ ELR
Sbjct: 448 SL--ELDQVRKYLVELR 462
>sp|Q8WI30|ATPA_PSINU ATP synthase subunit alpha, chloroplastic OS=Psilotum nudum GN=atpA
PE=3 SV=1
Length = 508
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 213 FVELKLLFLPFVNDLEKKVVPNMLKETSRLEQQLTEEQAAPLKVEE 258
F EL+ F F +DL++ N L RL + L + Q+APL VEE
Sbjct: 392 FAELEA-FAQFASDLDR-ATQNQLARGQRLRELLKQSQSAPLSVEE 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,736,990
Number of Sequences: 539616
Number of extensions: 4592367
Number of successful extensions: 20454
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 19869
Number of HSP's gapped (non-prelim): 826
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)